mRNA_P-littoralis_Contig99.15.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 105 bits (263), Expect = 5.530e-23 Identity = 67/182 (36.81%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE--------TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAA 519
P P P+ ++ ++ + A++A T TRR +RE Y+ E D D F L YW R D + + G V +PA P++ IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+ +R+ DA + KA K A + AA
Sbjct: 657 PVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDG-FNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVA----EVRELDAAVVKAKAAKTKVAQSSMAA 833
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.950e-23 Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAA 519
PA +L+R+E+ R A+ A + ++ + TRR +RE Y+ E D D F L YW R D + + G V +PA P++ IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+ +R+ DA + KA K A + AA
Sbjct: 465 PAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDG-FNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVA----EVRELDAAVVKAKAAKTKVAQSSMAA 638
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 6.900e-20 Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDAL------QAERKAQKEAAANAKNA 516
PA+ +L+R+E+ R A+ A A AS +V+ RR +RE Y+ E + D F L +W R D + +GNV +PA P++ IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+ +R+ DA +A + AQK A + A
Sbjct: 84 PASKRKKLSRLEERRAARVA-AASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDD-FNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD----EVRELDAAVSLARAKAAKSAQKSVACQEERA 261
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.910e-19 Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGK--ALRDWDALQAERKAQKEAAANAKNA 516
RR +RE Y+ E D D F L +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ DL N +VE+ + +RLNKHL+ + A W A A+K A A + A
Sbjct: 501 RRVLIEREMLVYLAEQPQVDVDD-FNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERA 639
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 7.670e-19 Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDAL------QAERKAQKEAAANAKNA 516
PA+ +L+R+E+ R A+ A A AS +V+ RR +RE Y+ E + D F L +W R D + +GNV +PA P++ IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+ +R+ DA +A + AQK A + A
Sbjct: 649 PASKRKKLSRLEERRAARVA-AASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDD-FNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD----EVRELDAAVSLARAKAAKSAQKSVACQEERA 826
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 7.810e-18 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAAA 522
RR +RE Y+ E D D F + +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ +LR N P +VE+ + +RLN+ ++ +R +DA A +A++ A NA +AA
Sbjct: 397 RRVLIEREMLVYLAEQPQLDVDG-FNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLD----EVRAFDA--AVSRAREMATKNAAKSAA 529
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 8.270e-18 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLN 414
RR +RE Y+ E D D F L +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ D R N +VE+ + +RLN
Sbjct: 118 RRVLIEREMLVYLAEQPQVDVDD-FNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.040e-17 Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 121 QREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
+RE Y+ E D D F + +W R + + +G V APA P++ IARLHLG++ATSCQAERNFSAL ++ LR N KVE+ + +RLN+HL+
Sbjct: 388 EREVLVYLAEQPQVDVDG-FNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.860e-16 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 229 SGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAAAG 525
+G V +PA P++ IARL+LG++ATSCQAERNFSA ++ LR P+K E+T+F+RLN+HL+ +R+ DA A+ KA A + AA G
Sbjct: 335 TGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVA----EVRELDAAVAQAKATATKTAQSSMAAQG 429
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 7.640e-16 Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 43 RLAQNAKIARPNTASSAVRETRRAA-AQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQ---KEAAANAKNAAAGGAGV 537
RLA++ + A +AV RR A +RE Y+ E + + F+ LE+W+ R+ V P PH+ LIARL G+++TSCQAERNFSAL ++ LR++ P KVE+ +FLRLN+ IP + KAL D A++A + A +E A + AAG A V
Sbjct: 341 RLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEE-EYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEV-KALHD--AVEANKAAAARCQEKVAQVEAEAAGDAVV 504 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig99.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig99.15.1 >prot_P-littoralis_Contig99.15.1 ID=prot_P-littoralis_Contig99.15.1|Name=mRNA_P-littoralis_Contig99.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp MEKIRLAQNAKIARPNTASSAVRETRRAAAQREYAEYMKEAALTDTDPTFback to top mRNA from alignment at P-littoralis_Contig99:89372..89961- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig99.15.1 ID=mRNA_P-littoralis_Contig99.15.1|Name=mRNA_P-littoralis_Contig99.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=590bp|location=Sequence derived from alignment at P-littoralis_Contig99:89372..89961- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig99:89372..89961- >mRNA_P-littoralis_Contig99.15.1 ID=mRNA_P-littoralis_Contig99.15.1|Name=mRNA_P-littoralis_Contig99.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=528bp|location=Sequence derived from alignment at P-littoralis_Contig99:89372..89961- (Pylaiella littoralis U1_48)back to top |