mRNA_P-littoralis_Contig989.22.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5KPQ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ6_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.120e-27 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLSAML 286
EQ +SKK +Y RS+NTM +NF + LRVINE QN+ +N+KTL T L ++ HP+ + + C ALW GR FC KPVMRVFD GRVD V L+ +L
Sbjct: 128 EQDHSKKALYLRSLNTMTSSNFTFALRVINERQNQGFNRKTLRTLLASVTEHPKDSFAGCEAALWRCGRRFCGKPVMRVFDCLGRVDIVMLATVL 222
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5KCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW5_9PHAE) HSP 1 Score: 110 bits (274), Expect = 5.410e-26 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLSAML 286
EQ +SKK + RS+NTM F+NF + LRVINE Q++ +N+KTL T L +I HP+ + + C LW GRCFC KPVMRVFD GRVD V L+ +L
Sbjct: 394 EQDHSKKALCLRSLNTMTFSNFTFALRVINERQDQGFNRKTLRTLLASITEHPKDSFAGCEATLWRCGRCFCRKPVMRVFDCLGRVDIVMLATVL 488
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5KGV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV9_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.670e-25 Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLSAML 286
EQ +SKK + RS+NTM F+NF + LRVINE QN+ +N+KTL T L ++ P+ + C ALW GRCFC K VMRVFD GRVD V L+ +L
Sbjct: 215 EQDHSKKALCLRSLNTMTFSNFTFALRVINERQNQGFNRKTLRTLLASVTELPKDSFDGCEAALWRCGRCFCGKSVMRVFDCLGRVDIVMLATVL 309
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5KXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC8_9PHAE) HSP 1 Score: 107 bits (267), Expect = 4.800e-25 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLSAML 286
EQ +SKK +Y RS+NTM F+ F + LRV+NE QN+ N+KTL T L ++ H + + C ALW GRCFC KPVMRVFD GRVD V L+ ML
Sbjct: 382 EQDHSKKALYLRSLNTMTFSGFTFALRVLNERQNQGCNRKTLRTHLPSVTEHAKDIFASCEVALWRYGRCFCRKPVMRVFDCLGRVDIVMLATML 476
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.620e-24 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFLSAML 286
E + K +Y RS+N M F NF Y+L VINE+QN +YN++ L L +DGH ++S C ALW GRCFC KP++RVFD FGR+D V LS +L
Sbjct: 1054 ESDHGVKVMYLRSINNMTFPNFTYSLSVINELQNRKYNRQLLDALLSRVDGHASPSMSGCQAALWTCGRCFCDKPLVRVFDCFGRLDLVCLSFVL 1148
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 4.540e-18 Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 2
Query: 2 EQHNSKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRFGRVDFVFL 274
EQ++SKK + SV MGF F + + +INE++N + N+KT + + GHPR+ L C + +W GRCFC+KP+MR FD+ G++ ++
Sbjct: 476 EQNHSKKIKFLPSVTGMGFDTFTFNVTLINELENVKINRKTCTLAVSSASGHPRHRLPACRKEVWSCGRCFCSKPLMRSFDKLGKLCISYM 566
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Match: A0A6H5JK42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK42_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 5.020e-5 Identity = 21/79 (26.58%), Postives = 42/79 (53.16%), Query Frame = 2
Query: 14 SKKPVYFRSVNTMGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDSGRCFCAKPVMRVFDRF 250
S+K + +NTMGF F++ + ++NE++N+ N +TL + ++ H +++C +W +G+ C D F
Sbjct: 190 SEKKKFLGMINTMGFDRFSFMVTLVNEIENDAINHRTLKVLVDSVRQHRSSRVAVCKVEIWLTGQNLCGMISSAEHDYF 268 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig989.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig989.22.1 >prot_P-littoralis_Contig989.22.1 ID=prot_P-littoralis_Contig989.22.1|Name=mRNA_P-littoralis_Contig989.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp MGFANFAYTLRVINEVQNEQYNKKTLGTFLGAIDGHPRYNLSICVEALWDback to top mRNA from alignment at P-littoralis_Contig989:88081..88419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig989.22.1 ID=mRNA_P-littoralis_Contig989.22.1|Name=mRNA_P-littoralis_Contig989.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=339bp|location=Sequence derived from alignment at P-littoralis_Contig989:88081..88419+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig989:88081..88419+ >mRNA_P-littoralis_Contig989.22.1 ID=mRNA_P-littoralis_Contig989.22.1|Name=mRNA_P-littoralis_Contig989.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=246bp|location=Sequence derived from alignment at P-littoralis_Contig989:88081..88419+ (Pylaiella littoralis U1_48)back to top |