mRNA_P-littoralis_Contig988.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig988.4.1
Unique NamemRNA_P-littoralis_Contig988.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A6H5JVV4_9PHAE (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV4_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 9.620e-82
Identity = 144/207 (69.57%), Postives = 164/207 (79.23%), Query Frame = 1 
Query:    4 MAHLQGMNATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVD-AEQADGQ-GKTHLL-PRQELSVAQKAANFCYANPFKMVVGMGLPAVGGILYSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFVVSEPEEELEEQQ*EGA 615
            MAHLQGM+A+EKRGRVLRLA +EGMKA G+AG  S A + AA + SP F K+TSVSAKTALAVSPFFL Y LR+ELVMHGAN +PHAYG+VD    ADG  GK+ +L PR+EL+ AQ+ AN+CY NPFKMVVGMG+PAVGGILYSMRNEG+LKLSQKLIHTRVYGQ TVVSI VA M FQE M+R GG F V   E      + EGA
Sbjct:    1 MAHLQGMDASEKRGRVLRLAHEEGMKAGGLAGLLSCAGLVAANKFSPWFRKSTSVSAKTALAVSPFFLFYLLRSELVMHGANHDPHAYGIVDDVVGADGTTGKSKILQPREELNAAQQLANWCYVNPFKMVVGMGVPAVGGILYSMRNEGNLKLSQKLIHTRVYGQMTVVSIAVAMMVFQETMRRRGGLFTVPGAEXXXXXXEVEGA 207
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BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A835ZA60_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA60_9STRA)

HSP 1 Score: 139 bits (351), Expect = 9.240e-35
Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 1 
Query:   37 KRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVDAEQADGQGKTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGILYSMRNEGH--LKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            K+ ++L LAQ EG+K   IAG  S A V AA   S +F   T+VSA+ ALA+SP   AYF+  E VM GA  +P  YG+        Q     LP   L    + AN  Y+NPF ++ G+G+PAVG I +    EGH  LK SQK++HTRV+GQ TV+ ++V+TM F++ M +NGG FV
Sbjct:    7 KKEQILSLAQHEGIKWGTIAGTISIAAVTAAQLYSKKFVAKTNVSARVALAISPPLGAYFVVAEKVMSGAQTDPAKYGIFPKGHMAAQPTEQRLP--SLQWYHRLANTAYSNPFGLIAGVGVPAVGAIFWQQSREGHNHLKFSQKVMHTRVFGQMTVLGVLVSTMFFRDYMYKNGGLFV 183
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A835YR00_9STRA (HIG1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR00_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.640e-31
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1 
Query:   37 KRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVDAEQADGQGKTHLLPRQELSVAQ---KAANFCYANPFKMVVGMGLPAVGGILYSMRNEGH--LKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            K+ +VL LAQ EG++    AG  STA V AA  LS  F   T+VSAK ALA+SP    Y L  E  M  A  +P  YG+       G   T    RQ+ +  +   + AN  Y+NPF  +  +G+PAVG I +    EGH  LK SQK++HTRV+GQ TV+ ++V+TM F++ M RNGG +V
Sbjct:    8 KKEQVLSLAQHEGLRWGTAAGIASTAAVFAAQHLSQAFRVRTNVSAKVALAISPPLALYNLMAERTMIRAQHDPALYGIYPK----GHVATAQQARQQRATLRWYHRLANGAYSNPFAFIAALGVPAVGAIFWQQSREGHAHLKFSQKVMHTRVFGQMTVLGVLVSTMVFRDYMYRNGGLYV 185
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BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A4D9CRH9_9STRA (HIG1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRH9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.470e-26
Identity = 73/196 (37.24%), Postives = 107/196 (54.59%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVDA------------------EQADGQGKTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGILYSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGG 558
            +A   + +V+ LA  EG++AA  AG  S   V AA + SP FNK+  +S K    +     ++FL +ELV+  A ++P AYG +D                   E+ +G G  H+ PR    V    AN  Y +PF+M+V +  P +GG  Y+   +  LKLSQ++IHTRV GQ +V+ I+  TMGF+E M +NGG
Sbjct:    6 DALSVKQQVVDLAVAEGVRAAVGAGCLSGLGVFAAHKYSPWFNKSLGISGKVGTVMLAITGSFFLFSELVLIDAQRHPQAYGFMDTPALAAAPTDAAKPDAEKREKDEGLGMIHIKPRY---VYATVANHLYDHPFQMLVALSTPIIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFREWMTKNGG 198
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A0P1AYQ7_PLAHL (HIG1 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYQ7_PLAHL)

HSP 1 Score: 106 bits (264), Expect = 7.730e-23
Identity = 64/184 (34.78%), Postives = 105/184 (57.07%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAY-GLVDAEQADGQGKTHLLP---RQELSVAQKAANFCYANPFKMVVGMGLPAVGGIL-YSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGF 561
            N  + R  + R A   G+KA  +   F+ A V +A +  P F    +VS KTAL VSPF  A+ L  E  +    +NP  Y   +D+        +++ P   + +L + QK+ANF Y +P++ ++G+G+P VGGI  Y + N+G +  SQ+++HTR+YGQ  VV +++++M F + M + G F
Sbjct:   17 NKHQVRDAISRHAYISGLKAGAVTSVFAAAAVFSANKYWPAFRNRLNVSGKTALIVSPFLAAFTLVAETRLMQGARNPDLYLASIDS--------SYIAPTEDKSQLKLWQKSANFLYDHPYRTLIGVGIPIVGGIYGYQLLNKG-ISASQQIMHTRIYGQGAVVVLLLSSMAFHDYMAKRGKF 191
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BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: H3GRL4_PHYRM (HIG1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRL4_PHYRM)

HSP 1 Score: 106 bits (264), Expect = 7.730e-23
Identity = 70/186 (37.63%), Postives = 106/186 (56.99%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTE-LVMHGANQNPHAYGLVDAEQADGQGKTHLLPRQE---LSVAQKAANFCYANPFKMVVGMGLPAVGGIL-YSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            N  + R  +   A   G+K   +   F+ A VA+A +  P F    +VS KTAL VSPF  A+ L  E  +MHGA +NP  Y        DG   +++ P+QE   L   QK+ANF Y +P++ ++ +G P VGGI  Y   N+G +  SQ+++HTR+YGQ +VV +++++M F + M + G F V
Sbjct:   17 NPNQARDAITWDAYTSGLKVGSVTAVFAAAAVASANKYWPAFRNRLNVSGKTALVVSPFLGAFTLVAENRLMHGA-RNPELYMAT----MDG---SYVAPKQETSHLKFWQKSANFLYDHPYRALITVGTPLVGGIYGYQHMNKG-ISASQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGKFTV 193
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A329RZG3_9STRA (HIG1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RZG3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.450e-22
Identity = 66/183 (36.07%), Postives = 103/183 (56.28%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTE-LVMHGANQNPHAYGLVDAEQADGQGKTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGIL-YSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            N  + R  +   A   G+KA  +A  FS+  V +A +  P F    +VS KTAL +SPF  A+ +  E  +MHGA +NP  Y        DG        + +L   QK+ANF Y +P++ ++ +G+P VGGI  Y   N+G +  SQ+++HTR+YGQ +VV +++++M F + M + G F V
Sbjct:   17 NPNQARDAISWHAYTSGLKAGAVAAVFSSTAVFSANKYWPAFRNRLNVSGKTALVISPFLGAFTIVAENRLMHGA-RNPELYMAT----MDGSYVAPTKEKSQLKFWQKSANFLYDHPYRALITVGVPLVGGIYSYQHLNKG-ISTSQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGRFTV 193
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: W2YZQ3_PHYPR (HIG1 domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2YZQ3_PHYPR)

HSP 1 Score: 105 bits (261), Expect = 1.990e-22
Identity = 67/184 (36.41%), Postives = 104/184 (56.52%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTEL-VMHGANQNPHAY-GLVDAEQADGQGKTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGIL-YSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            N  + R  +   A   G+K+  +A  FS+  V AA +  P F    +VS KTAL +SPF  A+ L  E  +MHGA +NP  Y   +D    + + K       +L   QK+ANF Y +P++ ++ +G+P VGGI  Y   N+G +  SQ+++HTR+YGQ  VV +++++M F + M + G F V
Sbjct:   17 NPNQARDAISWHAYTSGLKSGAVAAVFSSIAVFAANKYWPAFRNRLNVSGKTALVISPFLGAFTLDAETRLMHGA-RNPERYIATMDGSYVEEEKKV-----SKLKFWQKSANFLYDHPYRALITVGVPLVGGIYGYQQLNKG-ISTSQQIMHTRIYGQAAVVVLLLSSMAFHDYMAKRGRFTV 193
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A225VHV2_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VHV2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.740e-22
Identity = 69/185 (37.30%), Postives = 102/185 (55.14%), Query Frame = 1 
Query:   25 NATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVDAEQADGQGKTHLLPRQE---LSVAQKAANFCYANPFKMVVGMGLPAVGGIL-YSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFV 567
            N  + R  +   A   G+KA  +A   + A V +A + S  F    SVS KTAL VSPF  A+ L  E  +    +NP  Y        DG   T++ P+QE   L + QK ANF Y +P++ +V +G P VGGI  Y   N+G +  SQ+++HTR+YGQ +VV +++++M F + M + G F V
Sbjct:   17 NPNKARDAISWHAYTSGVKAGAVAAVVAAAAVLSANKYSAAFRSRLSVSGKTALVVSPFLGAFTLVAETRLMEGARNPEMY----MASMDG---TYVAPKQEASQLKLWQKGANFLYDHPYRCLVTVGAPIVGGIYGYQHLNKG-ISTSQQIMHTRIYGQASVVVLLLSSMAFHDYMAKRGKFTV 193
[Close]
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Match: A0A7S2W876_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W876_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.030e-21
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 
Query:   40 RGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFNKATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLV---DAEQADGQGKTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGILYSMRNEGHLKLSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGF 561
            R + +R+A +E  +   I G  STA V    + S  F  +  +S K A+ +SP    +FL +E  M     NP  YGL        A  Q  +  + + +L    +AAN+ Y +PF ++ G  +P VG I YS     HLKLSQK++HTRV GQ +VV+++++ M F++ M R+G F
Sbjct:   16 RNQCVRVAVKEAAEKTVIVGIASTAAVMYLNQSSRWFRTSLGISGKVAMVMSPIVGTFFLVSEHTMSDVKFNPRKYGLNRDGSLATAPVQMNSPNVLKGQLMAHHRAANWAYDHPFHVLAGCAVPLVGSIFYSQTGHDHLKLSQKIMHTRVLGQASVVTLLLSVMFFRDYMDRHGRF 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig988.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVV4_9PHAE9.620e-8269.57HIG1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZA60_9STRA9.240e-3545.25HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YR00_9STRA3.640e-3143.41HIG1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A4D9CRH9_9STRA3.470e-2637.24HIG1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A0P1AYQ7_PLAHL7.730e-2334.78HIG1 domain-containing protein n=1 Tax=Plasmopara ... [more]
H3GRL4_PHYRM7.730e-2337.63HIG1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A329RZG3_9STRA1.450e-2236.07HIG1 domain-containing protein n=2 Tax=Phytophthor... [more]
W2YZQ3_PHYPR1.990e-2236.41HIG1 domain-containing protein n=7 Tax=Phytophthor... [more]
A0A225VHV2_9STRA3.740e-2237.30Putative membrane protein n=1 Tax=Phytophthora meg... [more]
A0A7S2W876_9STRA1.030e-2135.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig988contigP-littoralis_Contig988:20441..25798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMM9
PFAMsHIG_1_N
Model size1563
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.37e-87
EggNOG OGs2CCEF@1|root,2S0YR@2759|Eukaryota
Ec32 ortholog descriptionHypoxia induced protein, domain
Ec32 orthologEc-06_003930.1
DescriptionHypoxia induced protein conserved region
Cds size603
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig988.4.1prot_P-littoralis_Contig988.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig988 21398..25795 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791907.6327837-UTR-P-littoralis_Contig988:20440..213971680791907.6327837-UTR-P-littoralis_Contig988:20440..21397Pylaiella littoralis U1_48UTRP-littoralis_Contig988 20441..21397 -
1680791907.7156663-UTR-P-littoralis_Contig988:25795..257981680791907.7156663-UTR-P-littoralis_Contig988:25795..25798Pylaiella littoralis U1_48UTRP-littoralis_Contig988 25796..25798 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791907.6465662-CDS-P-littoralis_Contig988:21397..216151680791907.6465662-CDS-P-littoralis_Contig988:21397..21615Pylaiella littoralis U1_48CDSP-littoralis_Contig988 21398..21615 -
1680791907.6588292-CDS-P-littoralis_Contig988:22546..227231680791907.6588292-CDS-P-littoralis_Contig988:22546..22723Pylaiella littoralis U1_48CDSP-littoralis_Contig988 22547..22723 -
1680791907.6713467-CDS-P-littoralis_Contig988:23387..234521680791907.6713467-CDS-P-littoralis_Contig988:23387..23452Pylaiella littoralis U1_48CDSP-littoralis_Contig988 23388..23452 -
1680791907.6829238-CDS-P-littoralis_Contig988:25445..255181680791907.6829238-CDS-P-littoralis_Contig988:25445..25518Pylaiella littoralis U1_48CDSP-littoralis_Contig988 25446..25518 -
1680791907.6948555-CDS-P-littoralis_Contig988:25725..257951680791907.6948555-CDS-P-littoralis_Contig988:25725..25795Pylaiella littoralis U1_48CDSP-littoralis_Contig988 25726..25795 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig988.4.1

>prot_P-littoralis_Contig988.4.1 ID=prot_P-littoralis_Contig988.4.1|Name=mRNA_P-littoralis_Contig988.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
MAHLQGMNATEKRGRVLRLAQQEGMKAAGIAGFFSTACVAAATRLSPRFN
KATSVSAKTALAVSPFFLAYFLRTELVMHGANQNPHAYGLVDAEQADGQG
KTHLLPRQELSVAQKAANFCYANPFKMVVGMGLPAVGGILYSMRNEGHLK
LSQKLIHTRVYGQFTVVSIVVATMGFQEMMKRNGGFFVVSEPEEELEEQQ
*
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mRNA from alignment at P-littoralis_Contig988:20441..25798-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig988.4.1 ID=mRNA_P-littoralis_Contig988.4.1|Name=mRNA_P-littoralis_Contig988.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5358bp|location=Sequence derived from alignment at P-littoralis_Contig988:20441..25798- (Pylaiella littoralis U1_48)
AGGATGGCCCACTTGCAAGGCATGAATGCTACTGAGAAGCGAGGGCGCGT
GCTCCGCTTGGCGCAGCAGGAAGGTCAGTCTTGTTATTTTCTTTATTTTG
CAGTTTTCTCTTTATCTGATACTAGGTGCTGTACTCGCTATCAACGGGAC
GAAAACATAAGGACACACGAACACACACACGTACACACTCTGTGACCGGC
ACTTACCCTGGACACTGACCTGTTCTGTGTTCGATTCCCATCCGTCCCTG
CTTGTCAACGATTTCTTACCGCTGAGCTAGGGATGAAAGCTGCCGGAATT
GCAGGGTTTTTCTCAACGGCTTGCGTGGCAGCAGCAACGCGCCTTTCCCC
CAGGTACCTGCTGCTGTCGCTCTCACCATAAGTGAAACTCCTATACCCGA
AGAGAAAAAGGGTCAAGTCTAGAACATGATGAACTTGTGTGTTATACAGA
TGCTGAAGTATACCTATAAAACTTCGAAAGTACGTCGCTTGGTCGATAAA
TGTTGATAGGTCGTGCCGTGTGTTCGTAAAGCAGACCCCGTGTGTGATGA
TGGGCGAGGCAGCTTTCGTGTGAAAGCCCGTTGAATCTGGACATTCCGCG
TATTGCGGCTCTCAAACAAACCTACCTTATTAGAGCTACGGTTACTCATA
TATAGGAGGCAGTTCTACTGATGCTCTTAACTCAATCCATGCGCCGACTC
TACAGGGGTGGTTCAGTGGTGATCATTTTTTTTTTTTCTTACAAAACATA
AACGTGTGTCACATAAGACGACGACCAAATTGTCTTGTTGAGCCTGATAA
CCTCAGGGGAGCTGCAACGGTGCACTATCTGATGTTCGATTCCCGGTGAA
TGTGTTCCTTTGCTACTTTGAAAGCGGCTATGCTGTCAGTAAAAGCAGAT
TCGGCTTCGCCGACGAGGGTAGGGACCGCGGACCCCTGCTCGCGAGAAAA
AATCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTAACTCCTCCTGTGT
TGACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGCA
GACTAGTGTGCCAGAGAATATGGGATGACAACACACACACACTATCTGAT
GAGTTAAGAAACACAACAGGTAGAAGAAACTTGTATGTATTATTCTCTCT
ACAGTATTCGCTGCAATATCTACCCCGGATCCTCGTCTGGGGAGAGGCGA
ACACATTGATGTTTTCGTAAGAAAAAAAAACCCCATCAATTTAAAAAAAA
AAACTTACAAACACATAACCTGAACTGGAGCCAGAAGTATTACACTACAC
AAGTGTCAGCTGATAACTGCTACGAAGTATAATCAGGTATTATGGAAGTT
CATTCATCAGACGAACCGGCCCGGGCAACTTGCACGTCAAACTCTGTGAG
GCTATCAAACGCAAGAGTACCAGGTATAGGTTGCACTCCTCTACACAATT
ATAGTGCTTGTAATGGAGAGTAAGGTAGTACACATACATGTACTGGTAAC
CAGGCCATAAAGGATACTCCGTTTAAAAAACACGAAGTAGTATCACATTG
ATTGATAAATATCATACCTCAGCGGAATGAAAATAATTGCTGTGTTGTTG
TCTGCAGGGATGCAAAATCTACTTCAAGTAGTCGTATAACCAGAAAAATC
AAAGACCACAACTATGCCAAGGATGATGCAAACAGCACTATAGATTGTAA
ACACTCAACACATGATGTAACGTGTGTCACACAAGACGACCACTAAATTG
TCTTCTTGAGCCTGATACCCACAGGGGAGCTGCAACGGTACATTATCTGA
TGAGTTCTAGAAACACTGGTAGATGTACCTCATTCTTTGTGTTCTCTGCA
ATATCTACTCCAGACCCTCGTCTGGAGAGAGGCGAACACATTGATGTGTT
TGCAAGTAAAAACAAAAAAAAAACACATCAATCAAATTTGCAAGCTGCAG
GTGTACAGCAGTATGATACGTACCATACGTATGATATGATAAGATAACGG
CCGATACATGTGTATCACAGACGAATTCCACATGTTTTGCTGTCCGTTTC
GGAGAAATTTCCGGTCAAAAGGCACCGAGGAAAATCACCCACGTGATCGA
TGAGTGAGACCTTCTTGCCCGTTGGGGTATCGCTGTTGTGAGTGAGATCG
CCCGTCTGTGATAATTTTGTATGGCACGAAATGGTAGTTGTTGTCGCGGG
GCGCTGGACCGCTACTCTACACGCAAGTCCCGCTATTGTTTTTTCTCTCT
TGTCCTGCAACCCGACACTCCCGACCTGGATGAACGTACGAACGTTGGGT
TCTCCCGCTATTTGTTTGTGTTTCCGGATGTATGCACGTTGTCCAGGTTC
AACAAGGCAACCAGCGTCAGTGCCAAGACAGCACTCGCGGTCTCTCCGTT
TTTCCTCGCCTGTGAGTGTGGACATACGCTGCTGCGCTACTGTCCTCCAC
AACAAAATATTGTTTTCGGCACGCGGAATCGAAGTATTGTACCATCCTGG
ACCATTGATGTATTCAACTTCGCACCAGTCATTCAGTACACCGGAATTCA
ACTCAACTTCGACACAAGGTGATAACCTTGCGTACTTCCGGCTCTGCTTC
GTAGGCTTGTTTGGCCGTGCGTGATGTGAAACAGCCCTCACTTTCGTTAG
TGTCGAACTGCATAGTACGGGCATTGTTTTCGATTCTCACCACGCTTTTC
CATAGTGGACCACCCGGATCGCATGAGATACACAAGATACCCAGATCAAT
CAAGTCTCACTTTTTCAAGGTTGAACTTTACTCCAGGAATCGCGTTGCGT
GCCCTGTACCCCCCCCCCCCCCCGTAGTGGAAATGTTGCAACCCTTTTCT
ACAAATGATACTTGTACGTCGCCCGCAAAAACTCAACGTGCCTTGAAGTA
GTCCTAGGTTTTCAAGGGTCGCCAGGGTCTGCAGTTGCCATTGCGATACT
GATACTACTAAAATGAGGCCATGCCCATGGAAACGAGTGTGCCCCATCTC
CTCTCCTCCCTCCCCCATGCCCGCGTTATGCCGGCTTTCCCCGCATGTCC
CCCATTTTCCCACCCCATCAAAAAGACTTCCTTCGGACGGAGCTCGTGAT
GCACGGCGCCAACCAGAACCCGCACGCCTACGGTCTCGTGGACGCCGAGC
AGGCTGACGGACAAGGGAAGACGCACCTGCTTCCCCGCCAGGAGCTCAGC
GTGGCCCAAAAGGCGGCCAACTTTTGCTACGCAAACCCCTTCAAGATGGT
CGGTGAGTCATTTAGTCTGTGTACGTATGTATGTGAGCGTGCGCGTGTGC
GTGTTTTGCCCGCTCACATTCACATGAAGATCGAGCTGTAAATTTACAGC
AGTCATTCTTCTAGGTGCCGTGACCGTGGCCAAACAAAGCAATGTCGTTG
TTGAAATGGGCAAGTCATACTTTTCACTTCATTGTACTAGTCAGAATTAG
ATTTGCAGAAAATAAATACGAAGATGATATCATAGATACTCAGATACAAA
AATAATTGAGTGTAAATGAGACAACATTTTTGGCGTGCAGCACCGACTAA
GTCCACCCTGGTACGCTACTTGTTACCGCAGCTGTCGAACCATTGCTTCT
CTCCTGCGTAGCCCCTATCCCACTTGGCTCTGGCTGTCCGTATGCTCGTT
GGTATGTACCAGTGGTGTGATTTTTTTTGGTCCCATATTTTTTTCTCCTT
CGGCCGGTAGACCCGTCTCGTACTCGATACGAAGCCGACGGTAGTCTCAG
CCCGTTGACGTTCTGAGTGAAAATAGCTGTGCACATCAAAATTCATACAC
AAGCGGCAATGCTGGAGGTGGTGTCTCCCTACAACAAGAGAGAGAGAGAG
AGAGAGAGAGAGGAGACAAGGAGAGATCAAAAGTCTCCCAAACACTCAGA
ATCAGCTCCGCTCTCGTTGACAAACTCGACGTGTGAAACATGGCAGTTTG
CAGCTAGCTGCGTAGCCTGGGTGAGATGTGCAGTTGTACCCCATCCGCTA
GTAGATACTTTCAGTGCTCAATCTAGTCGGATGCGCGTAGCCACTGCCGT
GTATGGAGATTGCAAGCACGAAATGTCCCCCCCCCCGCGCGCGCGTCCTC
CGGGCCGCTTCCTGTCTACCGTCCGTGCGCACTCTTCCCGTCCCTTTTGC
CTCGAATTGTTTTGCATTTTTTTTCTGTTCCAGTTGGTATGGGACTTCCG
GCGGTCGGAGGTATCTTGTATTCGATGCGAAACGAGGGCCACCTCAAGCT
CAGCCAAAAGCTTATTCACACCCGCGTGTACGGACAGTTCACGGTTGTGA
GCATTGTCGTGGCGACAATGGGTTTCCAAGAGATGATGAAGAGGAACGGG
GGCTTTTTCGTCGTCTCGGAACCAGAGGAGGAGTTGGAAGAGCAGCAATA
GGAGGGTGCGGGGGGAGTGGTGGCGCAACCAAGATCTTGTTGAGTTCGTA
AGGGAAGTTGTTGCTGTTGTGTGTGTGGAGAGAATCGGCCGGCCATCGTG
TATTTAGTTTGTGTTTGTGTGTGAGTTGGAAGCGAAACCTCTCTTGTGAT
TGGTGGGCTGTCGTCCCTTTTGCCCGACACCGTTTCTGTAGGTTCAATAC
TTCGAATTATATCGCCCGAGGGACAGAGGGCAAGATTGTTGCACGCAGTT
TTCTCACGTAGTAGAGTATCGAGCCGTGTCTTGTACTACTCGCTGGTTTG
AACCCACCACGTGATAGGCATTCTTGTGTCGGGCGTTTTGATGCCTCTGT
CGGTGTGGTTCTTGTCGGTACCCGTTTCCGTTTAAAATTTGTCCGCGCAC
CAGTGTTGGATGTATAGGTCGTCTTAACCGTCCGTGCGTGTGTTTTTTTT
GTCGAGAGTCGGCCAGGGATTTTCTGTGCGGCATGAAGCGCGAACGGTCG
TCGTTGCTACGGCAGCAGTGCAGACAGATGCCTTCTTGAATGAAACTGAA
GTATGACACGTACCTCGTTCGTGTTTCTTTGACTTCGCTGCACGGCGTTG
CCGGCTGTTGCCGAATTCCGCCACCTGAACTCGTATAGGAGCGAAAAACA
TAGAGGTTTAGCAGCCAGCAGTAAAGGCGTTCGTCCAGGGAACGAATGAT
TGTACCCGTCCGTGTGGTCAGCGATTCCCGTGAAAGTCTGGCGTCATCAT
CAGTTCAATCAGTCACCCACGGCGAATTTGATTTTTTTGAATTTTTTCAA
GAGGTGACGTCATGACCGTGGATGTCATCACCGGTCGACCATGGAATTTT
CCGCACACAGGAAGTTTCCTTTCAAAAAGAATTGACCGATCAGAAAACTG
CGGGCACCTTTTCTCTCTACTTGCACTCTAAACCTCTGTGTTTTTCGCTC
CTACATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig988:20441..25798-

>mRNA_P-littoralis_Contig988.4.1 ID=mRNA_P-littoralis_Contig988.4.1|Name=mRNA_P-littoralis_Contig988.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=603bp|location=Sequence derived from alignment at P-littoralis_Contig988:20441..25798- (Pylaiella littoralis U1_48)
ATGGCCCACTTGCAAGGCATGAATGCTACTGAGAAGCGAGGGCGCGTGCT
CCGCTTGGCGCAGCAGGAAGGGATGAAAGCTGCCGGAATTGCAGGGTTTT
TCTCAACGGCTTGCGTGGCAGCAGCAACGCGCCTTTCCCCCAGGTTCAAC
AAGGCAACCAGCGTCAGTGCCAAGACAGCACTCGCGGTCTCTCCGTTTTT
CCTCGCCTACTTCCTTCGGACGGAGCTCGTGATGCACGGCGCCAACCAGA
ACCCGCACGCCTACGGTCTCGTGGACGCCGAGCAGGCTGACGGACAAGGG
AAGACGCACCTGCTTCCCCGCCAGGAGCTCAGCGTGGCCCAAAAGGCGGC
CAACTTTTGCTACGCAAACCCCTTCAAGATGGTCGTTGGTATGGGACTTC
CGGCGGTCGGAGGTATCTTGTATTCGATGCGAAACGAGGGCCACCTCAAG
CTCAGCCAAAAGCTTATTCACACCCGCGTGTACGGACAGTTCACGGTTGT
GAGCATTGTCGTGGCGACAATGGGTTTCCAAGAGATGATGAAGAGGAACG
GGGGCTTTTTCGTCGTCTCGGAACCAGAGGAGGAGTTGGAAGAGCAGCAA
TAG
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