mRNA_P-littoralis_Contig988.1.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig988.1.2
Unique NamemRNA_P-littoralis_Contig988.1.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI)

HSP 1 Score: 833 bits (2153), Expect = 3.780e-278
Identity = 564/991 (56.91%), Postives = 611/991 (61.65%), Query Frame = 3 
Query:  366 MMLMGTEGGRPAVGDAA----EGSTSP-GSAATDDITPTPQPPPSPCLNEIGDDDATPRQQWSPVYTVGGGRSSGANPNNNRGYHGR-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSQTAVNIKGGGGYAGTFSNNNFQGVYPQQALHQRPRLASSRPDSPVLRVDLERLDLNALALGEEGGPTVPHHGTGAGGAFGGITSAGSSSSRYGRGELVLHPGDTFRSEHGAMVQGMRPRSLGGRPSRAHALFVAPGQLGTGPASPPSSYSTHSESGGFASPTTRLASPFGQHFVGFVGSGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQGRVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYL-RTPRAEDGSAGDGXXXXXXXXXXXDDNEIPLEAMGRAPFMSRMRRCSSATLPDLLSRSQVLRG----ADAFAASGTAPVGTLRPPSPRYGPGGVAAHNKRTTPTRRR------------------------------------------------VYTEVAMPPPESRGLVRRSSMP-AGRSPPITPEKPRRXXXXXXXXXXXXXSNRR-----------------AAEEEGAMDSGPVMHARLRSPGDGIDXXXXXXXSKSSTRNGGGMSRCTSSSGSGGRTYTGASVLRSSLMAAGADAGALAAADAAEGPRQAAPTPILPPVLRELLGTLDHGGGV-QGAPMCVFHAGDTPPPTVRPLKLHHS--VSARSWR 3086
            M LMG EGGR  V  A     EGS SP GSA T+       PPPSP L +IGDDDATPRQQWSPV+TVGG       P+  RG+H                                  XXXXXXXXXXXXXX      NI          S+ N            +PR+AS  PDSPVLRVDLERLDL+ LALGEEGGP +P     A G  G                 +LH   TF SE G      RPRSLGGRPSRAHALFVAPG++GTGPASPPSSYSTHSESGGFASPT RLASPFG    G  G G             XXXXXXXXXXXXXX     QGRVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKR+LCIFQEWVPAGSLHSLL QFG+LSDAMTRKYTRQVL+GL+YLHA+RVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFSENPGPPPLPED LSP+LR+FLLSCFTW+A +RPTS +L  HEYL R  R      GDG           +DN+IPLEAMGRAPFM+RMRRCSSATLP+L+ RS    G     D  AA GTAP GTLRPPSPRYGPGGVAA N + TPT                                                   VY +VA       GLVRR+SMP AGRSPP++P+KPRR                +                  AEEE  + SGPV HARLRS GDGI        +                        T +                          R+AAPTP LPP++RELLGTL+ GGG+ +G    + H+GDTPPP VRPL+   S     R WR
Sbjct:    1 MRLMGPEGGRADVVAAGVGVHEGSASPPGSANTN-------PPPSPSLYDIGDDDATPRQQWSPVHTVGGSGGGAMKPSRTRGHHXXXXXXGTFAGVDGGELRAPAGKSNSSGAGDSTWXXXXXXXXXXXXXXXXXXXTNI--------ALSHQN------------KPRVAS--PDSPVLRVDLERLDLSVLALGEEGGPAIP-----ADGRAGXXXXXXXXXXXXXXXSELLHS-RTFCSEPGG-----RPRSLGGRPSRAHALFVAPGKIGTGPASPPSSYSTHSESGGFASPTVRLASPFGLSSAG-AGKG-----------EHXXXXXXXXXXXXXXQFHPQQGRVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRKLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFSENPGPPPLPED-LSPALREFLLSCFTWEAGRRPTSHQLVAHEYLLRDWRVSAVRGGDGTGSSGSG----EDNDIPLEAMGRAPFMTRMRRCSSATLPELMQRSHAFGGRGGGGDPLAAFGTAPSGTLRPPSPRYGPGGVAAANSKRTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVY-QVAGGGAPGTGLVRRASMPHAGRSPPVSPDKPRRPGRGSSPGRCSSAVPMQHYHXXXXXXXXXXXXXLQAEEE-RLGSGPVGHARLRSMGDGIAGTGFGAATSXXXXXXXXXXXXXXXXXXXXXXRTDSEAXXXXXXXXXXXXXXXXXXGGGHAMRKAAPTPTLPPIVRELLGTLEQGGGLREGEGGLLLHSGDTPPPMVRPLERSASGQPGQRGWR 932
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA)

HSP 1 Score: 273 bits (698), Expect = 3.280e-78
Identity = 140/273 (51.28%), Postives = 185/273 (67.77%), Query Frame = 3 
Query: 1377 QGRVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKD--DNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPG-PPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYLR 2183
            +GRV+ G WK G  I  GS G VY+G+NE TGELMAVK ++L   +R +  L+ E+ +M +  HP+IV YLGAE+++   +LCIFQEWVP GS+ SLL +FG  S+ MTR+YTRQ L GL YLH H+V+HRD+K  NILVDDRG VKLADFG ++ + D  D G G   ++KGTP FMAPE+L ++  G  VD+WS G A+L+MVT  PPW       P  +++   E  G PPPLP + LSPSL   L  CF+WD A RP++ +L    +L+
Sbjct:   83 RGRVRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGG---ALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTMLERKGQPPPLPAN-LSPSLAAMLRRCFSWDPALRPSAAQLELDAFLQ 351
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.770e-78
Identity = 141/268 (52.61%), Postives = 174/268 (64.93%), Query Frame = 3 
Query: 1383 RVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGP-PPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYL 2180
            RV+ G WK G  I  GS G VY+G+NE TG LMAVK ++L   DR L  L+ E+ +M    HP+IV YLGAE+++   +LCIFQEWVP GS+ SLL +FG  S+ MTR YTRQ L GL YLH+H V+HRD+   NILVDD G VKLADFG +L L D  G   + ++KGTP FMAPE+L +   G  VDVWS G AVL+MV+  PPW       P  +++   E  G  PPLP D LS  LR FL  CF WD A+RPT+ EL    +L
Sbjct:    1 RVQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVKVLSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQALLERRGQTPPLPAD-LSAGLRAFLERCFRWDPAERPTAAELALDPFL 267
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: D7G097_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G097_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.950e-73
Identity = 146/314 (46.50%), Postives = 199/314 (63.38%), Query Frame = 3 
Query: 1386 VKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGV-EMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWAD-TFKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYLRTPRAEDGSAGDGXXXXXXXXXXXDDNEIPLEAMGRAPFMSRMRRCS 2321
            V+ GHWK G  IG GS G+V++G+NED+G+L+AVK ++L+  D+    LY EI++M +L HP+IV YLGAE+ D ++ + IFQEWVP GS+ +LL  FG  SD     YT+Q+L GL+YLH+ RVIHRD+K  NIL+DDRG VKL DFG + +L  D+  G+ E +  G+PLFMAPE+LL+ + G +VD+WSLG AVLEM T +PPW     + PV +I       GPPPLP D LS  L  FLL CF  + +KR T+ EL    ++   R E   A  G           D     ++ + R   ++R+RR S
Sbjct:   54 VRTGHWKLGHEIGKGSFGSVHIGLNEDSGDLIAVKLLSLKNADQA-EELYTEIELMRQLTHPNIVCYLGAEVNDKEKTISIFQEWVP-GSVTTLLVNFGPFSDRRIADYTKQILQGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDADSFTGLGEHTRVGSPLFMAPEILLREEYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLP-DSLSQPLTKFLLRCFERNPSKRATAKELLSDPFVARRRGERVLAPRGSAASDADSVVSD-----IDNLSRTAAIARIRRAS 359
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A7S1XYM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYM9_9STRA)

HSP 1 Score: 239 bits (611), Expect = 6.350e-65
Identity = 136/328 (41.46%), Postives = 184/328 (56.10%), Query Frame = 3 
Query: 1383 RVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEI----------------------------------------TLETKD--------------------RLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLK-DDNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYL 2180
            R +   WK G  IG GS G+VY+G+N+D GELMAVK +                                        ++E++D                    RL+ +L NEI++M  L HP+IV YLG  +     ++ IFQEWVP GS+ SLL +FG  S+ M + YTRQVL+GL YLHA+ +IHRD+K  NILVDD GNVK++DFGC+ V+  + NG     SMKGTP FMAPE+L +   G+R DVWS+G  V++M+T   PW+    K+ + +      + GPPP+PE  LSP L++FLL CF  D  KRP + EL  H +L
Sbjct:  120 RARPERWKLGNKIGEGSFGHVYVGINQDNGELMAVKVLPIPGGGSALNHERRAAHIESQISSDRAAGVTSQRRSIEHDSMESEDSADQDALGSSADDAGASRGSRLVRALCNEIELMKMLDHPNIVAYLGTAVDAMAGKVYIFQEWVPGGSISSLLKRFGPFSERMCQSYTRQVLNGLTYLHANSIIHRDIKGANILVDDLGNVKVSDFGCSKVVSFNGNGSIGGTSMKGTPFFMAPEVLSRSHYGRRADVWSVGGLVIQMITGFAPWSQLKIKNILALHYRVVNSEGPPPMPEG-LSPLLKNFLLQCFVRDPKKRPHAAELSRHRWL 446
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: F0YL51_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL51_AURAN)

HSP 1 Score: 236 bits (601), Expect = 1.040e-64
Identity = 120/265 (45.28%), Postives = 171/265 (64.53%), Query Frame = 3 
Query: 1401 WKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSL---YNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGVEM-SMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYL 2180
            W+KG  IG G+ G VYLG+ EDTG ++AVKEI      + L  L     EI+++  L HP+IV YLG ++ D  + L IF EWVP GS+ +L+ +FG LS+A+ RKY  Q+L GL YLH  +VIHRD+K+ NILVDDRG +KLADFG +  +      G E  S++GTP FMAPE++++   G++ D+WS+GC +L+MVT +PPW       P  ++ H +    PPP+P   LS  LR+ LL+ F+ D   RPT+ +L  + ++
Sbjct:   59 WRKGDLIGTGANGRVYLGLEEDTGAIIAVKEILFTNNQQDLEELAQMQEEIELLRSLHHPNIVTYLGTDVSDDDQTLYIFTEWVPGGSIQALVTKFGKLSEAIVRKYVAQLLVGLDYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRMDSMGTMGNENHSLRGTPYFMAPEVIMQTGHGRKADIWSVGCTILQMVTGQPPWKSLQLGTPAALMFHIANAQAPPPMPS-ALSDHLRNLLLATFSRDMNNRPTANQLLEYPFV 322
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK)

HSP 1 Score: 235 bits (600), Expect = 2.270e-63
Identity = 122/265 (46.04%), Postives = 173/265 (65.28%), Query Frame = 3 
Query: 1383 RVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCA--LVLKDD--NGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLEL 2162
            RV+ G WK G+ IG G  G VY+G+ EDTG+L+A+K I+L  +   L +LY E+ +M  L HP+IV Y GAE+ + +  LCIFQ+WVP GS+ SLL +FG   + + RKYT+Q+L GL YLH +++IHRD+K  NILVD  G VKLADFG +  L + D+         +MKGTP FMAPE+++++K G++ D+WSLG AV+EM T  PPW     ++P+E+      +  PP + +  LS  LR FL  CF  +  +RP++  L
Sbjct:   86 RVQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKIISLPGQTSELATLYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGANILVDVTGVVKLADFGTSKRLEISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWKSLQMRNPIELFRFIHTHTHPPNI-DFSLSLPLRLFLERCFIRNPKERPSAKAL 349
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.660e-63
Identity = 123/270 (45.56%), Postives = 171/270 (63.33%), Query Frame = 3 
Query: 1401 WKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGDGV--EMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYLRTPRAED 2201
            WKKG+ IG GS G V++G+NE +G LMAVKE+   ++  +  +L  E+ +M  L H +IV YLG+E     R + IF EWVP GS+  LL +FG L++++ RKYTRQ+L GL YLH   VIHRD+K  NILVDDRG +KLADFG + VL    G  +    S++GTP FMAPE++ +   G++ D+WS+GC  L+MV+ +PPW    F     ++ H       PP+P D +S +LR FL+ CF    A+RPT+  L  H +L    A+D
Sbjct:    3 WKKGELIGAGSYGKVFVGLNELSGSLMAVKEVRASSEAEV-RALQQEVGLMRSLRHENIVQYLGSEADAKLRIVSIFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLSGAAGGSILENHSLRGTPYFMAPEVITQTGHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNTNEAPPMPHD-ISSALRSFLMICFQRLPAERPTANSLLQHPFLSHVPADD 270
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A8J2WWQ2_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ2_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.610e-62
Identity = 116/267 (43.45%), Postives = 175/267 (65.54%), Query Frame = 3 
Query: 1401 WKKGKPIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRL--LTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKD----DNGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELGGHEYL 2180
            W++G  IG G+ G VYLG+ ED+G ++AVKE+    +  L  L  +  EI+++  L HP+IV YLG ++ D  + L IF EWVP GS+ +L+ +FG LS+A+ RKY  Q+L GL YLH  +VIHRD+K+ NILVDDRG +KLADFG +  L      +NG+   +S++GTP FMAPE++++   G++ D+WS+GC +L+MVT +PPW +     P  ++ H +    PPP+P   LS  L + LL+ F+ D  +RP + +L  + ++
Sbjct:   54 WRRGDLIGTGANGRVYLGLEEDSGAIIAVKEMAFSNEQELEELAQMQEEIELLRSLQHPNIVTYLGTDICDENKLLYIFTEWVPGGSIQALITKFGRLSEAIVRKYVAQLLVGLKYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRLDSMGMINNGN---LSLRGTPYFMAPEVIMQIGHGRKADIWSVGCTILQMVTGQPPWKNLRLGTPAALMFHIANAQSPPPMPS-MLSIELNNLLLATFSRDTNRRPAANDLLRYPFV 316
[Close]
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Match: A0A7S1FWX6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWX6_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.160e-62
Identity = 123/268 (45.90%), Postives = 172/268 (64.18%), Query Frame = 3 
Query: 1383 RVKKGHWKKGKPIGVGSCGNVYLGMNEDTGELMAVK--EITLETKDRLLTSLYNEIQVMHKLVHPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTRQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDD---NGDGVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADT-FKHPVEIIEHFSENPGPPPLPEDK--LSPSLRDFLLSCFTWDAAKRPTSLEL 2162
            RV+   WK G+ IG GS G V++GM++ TG L+AVK   I  E+    +  L  E+ +M +  HP+IV YLGAE+ D +  L IFQEWVP GS+  LL +FG     + R Y  QVL GL YLHA+ +IHRD+K  NILVDDRGNVKLADFG +  L +D   NG G+  S++GTP FMAPE+L + K G++ D+WS+GC +++M+T  PPW    F+ PV ++ H   +   PPL      +SP+L+  L  CF  D++ RP++ ++
Sbjct:  136 RVRPNQWKLGERIGSGSFGTVHVGMDDRTGTLIAVKLLHILHESLPSDIVELQREVDLMREFDHPNIVRYLGAEVDDEEGTLYIFQEWVPGGSVADLLKKFGGFGYGVVRNYLEQVLKGLAYLHANNIIHRDIKGGNILVDDRGNVKLADFGASKQLGEDGSLNG-GLAASLRGTPYFMAPEVLSQEKYGRKADIWSVGCVIVQMITGEPPWKRLGFRTPVSLLFHIHSSADLPPLSNHSCTISPALQKILNMCFQRDSSLRPSASQI 402
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig988.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN1_ECTSI3.780e-27856.91Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835YLD7_9STRA3.280e-7851.28Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLS7_9STRA3.770e-7852.61Kinase-like domain-containing protein (Fragment) n... [more]
D7G097_ECTSI1.950e-7346.50Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S1XYM9_9STRA6.350e-6541.46Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YL51_AURAN1.040e-6445.28Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A7S3UV54_HETAK2.270e-6346.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5G4S8_9STRA2.660e-6345.56Mitogen-activated protein kinase kinase kinase NPK... [more]
A0A8J2WWQ2_9STRA1.610e-6243.45Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A7S1FWX6_9STRA2.160e-6245.90Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig988contigP-littoralis_Contig988:10072..20421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMN1
PFAMsFHA,PB1,Pkinase
Model size5008
Max annot lvl2759|Eukaryota
KEGG koko:K11229
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.6e-288
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-06_003920.1
EC2.7.11.25
DescriptionMAP kinase kinase kinase activity
Cds size2919
COG categoryS
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791907.5413566-UTR-P-littoralis_Contig988:10071..104361680791907.5413566-UTR-P-littoralis_Contig988:10071..10436Pylaiella littoralis U1_48UTRP-littoralis_Contig988 10072..10436 +
1680791907.5868137-UTR-P-littoralis_Contig988:18697..204211680791907.5868137-UTR-P-littoralis_Contig988:18697..20421Pylaiella littoralis U1_48UTRP-littoralis_Contig988 18698..20421 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791907.5536711-CDS-P-littoralis_Contig988:10436..116181680791907.5536711-CDS-P-littoralis_Contig988:10436..11618Pylaiella littoralis U1_48CDSP-littoralis_Contig988 10437..11618 +
1680791907.5647404-CDS-P-littoralis_Contig988:16752..170221680791907.5647404-CDS-P-littoralis_Contig988:16752..17022Pylaiella littoralis U1_48CDSP-littoralis_Contig988 16753..17022 +
1680791907.5753274-CDS-P-littoralis_Contig988:17230..186971680791907.5753274-CDS-P-littoralis_Contig988:17230..18697Pylaiella littoralis U1_48CDSP-littoralis_Contig988 17231..18697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig988.1.2prot_P-littoralis_Contig988.1.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig988 10437..18697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig988.1.2

>prot_P-littoralis_Contig988.1.2 ID=prot_P-littoralis_Contig988.1.2|Name=mRNA_P-littoralis_Contig988.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=973bp
MMLMGTEGGRPAVGDAAEGSTSPGSAATDDITPTPQPPPSPCLNEIGDDD
ATPRQQWSPVYTVGGGRSSGANPNNNRGYHGRACGGGGGTFTTAGCTSEQ
QQRVHSARSTTSSTGDNNNGSSSCSQTAVNIKGGGGYAGTFSNNNFQGVY
PQQALHQRPRLASSRPDSPVLRVDLERLDLNALALGEEGGPTVPHHGTGA
GGAFGGITSAGSSSSRYGRGELVLHPGDTFRSEHGAMVQGMRPRSLGGRP
SRAHALFVAPGQLGTGPASPPSSYSTHSESGGFASPTTRLASPFGQHFVG
FVGSGGAGSSSSGSGAGAGRDYHHHYHQQQYHHHHQPQGRVKKGHWKKGK
PIGVGSCGNVYLGMNEDTGELMAVKEITLETKDRLLTSLYNEIQVMHKLV
HPHIVGYLGAELQDSKRRLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYT
RQVLDGLIYLHAHRVIHRDVKSKNILVDDRGNVKLADFGCALVLKDDNGD
GVEMSMKGTPLFMAPEMLLKRKCGKRVDVWSLGCAVLEMVTTRPPWADTF
KHPVEIIEHFSENPGPPPLPEDKLSPSLRDFLLSCFTWDAAKRPTSLELG
GHEYLRTPRAEDGSAGDGGSPGGGGSPGGDDNEIPLEAMGRAPFMSRMRR
CSSATLPDLLSRSQVLRGADAFAASGTAPVGTLRPPSPRYGPGGVAAHNK
RTTPTRRRVYTEVAMPPPESRGLVRRSSMPAGRSPPITPEKPRRPGRGSS
PGRGTSPSNRRAAEEEGAMDSGPVMHARLRSPGDGIDGGDGGDGSKSSTR
NGGGMSRCTSSSGSGGRTYTGASVLRSSLMAAGADAGALAAADAAEGPRQ
AAPTPILPPVLRELLGTLDHGGGVQGAPMCVFHAGDTPPPTVRPLKLHHS
VSARSWRGGCSGVSEQDAQLQRDEGAGVGGNGGEVWMASAAERGEAMAGV
RGSSGSSGGGGLGSRHLADRGE*
back to top

mRNA from alignment at P-littoralis_Contig988:10072..20421+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig988.1.2 ID=mRNA_P-littoralis_Contig988.1.2|Name=mRNA_P-littoralis_Contig988.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10350bp|location=Sequence derived from alignment at P-littoralis_Contig988:10072..20421+ (Pylaiella littoralis U1_48)
CAGGAACAAACGCCTCTGGGTCCTGGTGTTCTCCTTTCAATTTTCGATTC
TGCTGCCGTCCCTGCTTCCAAACAAAAGCACCACGTTCAAGCATCACCCC
CGTACGCCTTGTCTGTGTGCCTTGGCTGACTCCGTCCGAACCGACCCGGA
CAGAGCAGCTAGCCTCACAACAAGGTTTTGAGGAGGGAATACTACGAGAG
GGGAGCGTGCAGCCGGTAGTGAGTTGTGTGTGTTCGTGTGCGTGCTTTCC
TTTTTTGTTGACGGACGAAGGAGGAGCGAAAAACGCGGAGGCAGCATCGC
ATCTGATCTCATAACCGGCGCGCGGGGTCCGCTCGTTAGTGGAGCAGAGC
AGCGGGACAGCGATAATGATGCTGATGGGTACGGAGGGTGGGAGACCAGC
GGTAGGAGATGCAGCGGAGGGGAGCACGAGCCCGGGGAGCGCGGCCACGG
ACGACATCACGCCCACTCCACAACCTCCTCCTTCCCCCTGTCTGAACGAA
ATTGGAGACGATGACGCCACTCCCAGACAGCAATGGTCGCCAGTCTACAC
GGTAGGAGGCGGGCGCTCATCAGGAGCCAACCCAAACAACAACCGGGGGT
ATCACGGCCGGGCGTGTGGCGGTGGCGGTGGTACCTTCACCACGGCCGGC
TGTACCAGTGAACAGCAGCAGCGGGTTCACTCCGCGAGGAGTACCACGAG
CAGCACTGGGGACAACAACAATGGCAGTAGCAGCTGCAGCCAGACAGCAG
TAAATATCAAGGGCGGCGGAGGATACGCGGGAACTTTTTCCAACAATAAT
TTCCAAGGAGTTTACCCTCAACAAGCACTTCACCAGAGGCCTCGTTTGGC
CTCCTCGCGGCCCGACTCCCCCGTGCTGCGCGTGGACCTCGAGCGCCTGG
ACCTGAACGCCCTCGCGCTGGGGGAGGAAGGTGGCCCCACCGTTCCCCAC
CATGGAACCGGCGCCGGTGGCGCCTTCGGCGGCATCACAAGCGCTGGGAG
CAGCAGCAGCCGGTACGGCAGAGGAGAGCTCGTTCTCCACCCGGGAGACA
CGTTTCGGTCCGAACATGGGGCGATGGTCCAAGGTATGCGCCCGCGGTCA
CTCGGGGGAAGGCCAAGCCGAGCACATGCGCTCTTCGTGGCACCGGGGCA
GCTGGGCACCGGGCCGGCGTCGCCCCCCTCCAGCTACTCTACGCACTCGG
AGAGCGGCGGATTCGCGTCCCCGACGACTCGGCTCGCGAGTCCGTTCGGG
CAGCACTTTGTTGGGTTTGTTGGGAGTGGTGGAGCTGGGAGCAGCAGCAG
TGGGAGTGGGGCAGGAGCAGGGAGGGATTACCATCATCATTACCATCAAC
AACAATATCACCACCACCACCAGCCGCAGGGCAGGGTGAAGAAGGGTCAC
TGGAAGAAGGGGAAGCCGATCGGAGTGGGCAGCTGCGGTAACGTGTATCT
CGGTATGAACGAGGATACGGGAGAGCTGATGGCGGTCAAGGAGATCACCC
TGGAAACCAAGGATAGATTGCTCACCAGTCTCTACAACGAGATACAGGTA
TGATATCATATGAACGATATAGTTTCACAAATCATAATCATGTGTGTGAG
GTGCACGTGAATACGAAGTAGAAGTACCAACATACGGACAACCGCGGTGT
TACCTGATACAAATGTGTTTATCTACATGTCGAATCGCGTAGTTGACAAC
AAGCTACGCTTTCATGGCGGTCGGGCGGGTCCTCAAAAACAAAGCACGAA
GTGACCGTTATACTTCGTTCCTAATATGAAGTACTTCGAAGTACGTTCAG
AGAGGATGTAGTTTGAATATTTTCTTGGGCCTTTTTTTTTTTTCATCCTC
GTCTCTCTCCCCTCTCAGAAGATGACAATAGAACAGATTACCTGTATCCC
CTGTTTGTACACGTACATATAATACGTAAATACACTCCACACTTTTCTTT
TGACTTTGACGTTTCAGAGAACACAGCAGTACATGTCAAATAGCACCACC
AGCATTGTATAATTTTCAAGGGTGTTGCTGGTTGATTCCCTTGTGCACAG
CAGTACCTTGTGTTCGTTTCTAATATCCTCCCGTGACTCCTCTAGGATCA
GTGACGTCTCTCCTTTTGAAAAATGAAACATAAAAATCCCACAAGAGCCA
CCACGAACGTAAGCGTTGACTGTTCTATTTTTCAAGATCTCATTCCGGAA
TAGAGGCTGTACATGATGTGATTTTCATTACAAGTTACATGACAGCAGTG
TGGTATGGACGTGATTCGAAAGGCACTACAGGCTGGTTTACGCAAGAAAC
ACCAAATTTTGTCAACGCACCGTCCCGAATGCAATAAAACACCGATCACA
ACAAATATGGTACCAAACTGACCGCTGTCAGTAGAGGAAGACCGCAAAGT
GCTCAGATTTTTGTAAAAGGCCTTTTCAGTGGAGCTACTGTAGTGGACGA
AATGTGCCATATCCAAAAAATGACGTTGTATAACACCCCCCCCAATTTTA
AAATATCAGGCTTTTAACTCTAAATGCTAGATGAAAAAAATTCGAGATAT
ATCTTTTTTTTACGAACGCATGGTCTCTTTTGTTTATCAGGACTGTGTCC
AACAAATATTTTCGAAACTCTATGTACGAATTGACGTAGTTTTGCCAATA
GCAGCGTAAATATTCTTAAAAACTGCCGATTCTGGTCTCTATCCTTGTGA
ATAGGTGTTTTTCAGTACTTGATCGCACTAAAGTGCGTTTTCTCACGCGG
TTTTTACGGGTCAGACCCTGAAACTTTGCACGCGTGTTCGTTATGTCAAC
ACGAAACTTTCTGCTGTCGGGGTGCAGCGATTTTTGTTTTTTTTACCGAA
TTTCTGGGGTCCCAAGTCGACAAATGCGTACAATAAATACCTTTACACAT
ATAACTATTGAAGGAAAAAAAAGTCGTTGCATCCCGACAGTAGAAAGTTT
GGTATTGACATAACGAACATGCGTGAAAAGTTTCAGGGCCTAAGGCTACT
TATTATGTGTCAAATATTAAAATATCAATTCTGATTCGTTTTCGATTTTG
ACAATTCCCACAGGGTGATATCAACATCGGATCTTAATGTGTAATAAACA
ATTTATCAATGTCGAAAACGTATTTTTCGTACAGCAGTACAGCAGTATGT
ATCGTATATGTAGGATCCCAAGAGGAGCCGTTTGGGTAGTAGACTGTACA
GCACATTTCAAAAATTTGGAGCGAGCGCAGCACCCTCTCGGGATGGAGCA
CGACGCGCTGTGTCACAGCCAGAACAGAGCAGCACCGCGCGCAAACCGTA
AATCTAGACAACAAGGTGTTGTCCCTCCCGCTCAACTACTCGGAGTACAC
CCAGGGAGGCTATTCGTAGCAAGAACGAGTACTGCTGATGATTCATATGC
AGGGCATCTATCTGCACAGCAGCAGTGTACGCGTGCTTGAAGGTGAAACA
CAATCAGTCGCTCTCTGCTGCTGCCGCCATGGGATGAAGGGCCACGCTGC
TGGCGGGCGACGACGAGGAAGTAACACGCTGACCGCCCGGGATAATGTAG
CAGCAGCAGCAGCAGTAGTGATGTGGCAGTACTGCTGCTACTGCTGTGGG
TGCTTGTGTTGTATGATGGCTTGCGTCGGGGTCTCAAACGTTTTCAATAA
TCATATTTGATATGCGAAGTAGCTCAGAAATGAGGCTCATTTCTGAGCCG
GGGCTGGATGAAAAATGATTATTGAAAATGTTTTCATCAAAAATGGCCCA
TTTCTGATCACATAACATGCCGGATCTGGGCCAAATATCGAAAACGAATC
AGTTTTGATATCCAGATCCAACACATAAAAAGTAGCCTAACTCGAAAAAA
CCGCGTGAGAAAACGATGTTGACTAAATTTGGTGTTTCTTGCGTGAACCA
GCCTGCATTTTGATATCATATCAAATCATGACGAAGGCTCGCAAGGTTTC
AACTAGAACTTATCGTAATATGAATAAAAGGTATTTACGGAACGGCAGTA
CAGGGTCGACCGGAGATGCCAGGAGTGCCTAACAAAACAAGAGGCAAATA
CCGCTGTTCTCAGAACCCAACCCCGAGAGGCACCGATGGTTCTCGCACTC
GCAAGTACCAAGAGGTACCAAGTAAATGACTTGATACCGCATTACAACTG
CTGTTCTTCATGTGTATACACACCTTGTATCCCATACGAAGCATCATGTA
CGAAGTACAGCGGTGCGAACATACAGCATGCAGGATTTACTCCGATTTAC
ACCACAGGTTTTCTCTCACACATGAATGTGTTTATATCGTATGATACGTA
CATTTGAGAATAAGGTCGGCATATGACACACTCCCCGCCGTCTTTTTCAC
TTCAGGAGCAGTTGTACTTTTTTTGTAACTTACATACGCCCTGGTGGTTC
AGTCGGTTATCCACACAACCTTCTGTTATTCACGCGTGGGTTCGAATCCC
AGTGTAGTAACACGATCTGGGTTTTCTTCTCACAATGCGCGTGAAAGTGG
AAAGCGATGAATTCGTGAGTAAACAAATTTCGATCGTGACATCGACGAGG
GAAAGGGATCGCTGTCCCGTTTCTCGCGATAAAAGCTCAACCAAAACAAG
GCAAGCACCGCAGAGGGACGTGGAGAAAAAAAAAAATCCTGTGTTGACTT
CCCCCTTTGTGACCTCAGTTGGAGCGTCGACCCACCCGAAAGGTGCAGAG
TGGCGTCCAATTAAAGGAATGATAACACACACACACACACACACACACAC
ACACACACACACTTCGTACACACACACTTCGTACACAACAAGCGAGGAGA
GAACCGAAGAGGAGGAGGAAAAGGGGGAGGGGGAAGCTCGAGGAAGCAAG
CGCAGAAAGACCCGGAAGGATGAGACGACGGCGGCAGAGGAGAGCAAGAA
GGAATTGATGGAAACAGTAGCACGGCATATGCACCAGATTGAATGACACT
GTTGTGATACCACAACCCTTCCCATCCGTTCCCCACCGCATCAGTGCGCC
CCCCCCCTGTTGAGTTACCGTGGACTGAGTTACCACGTACCTCGAATTTT
TCCCCACCGCATCAGTGCGCCCCCCCCCTGTTGAGTTACCGTGGACTGAG
TTACCACGTACCTCGAATTTTTCTTTTTTGTGTTGTCTGTTTTTCTGCCC
TCCTGCCTTTTGCCCCTTCACGTCTGCTTGCTTACGCTGCGTGAAACTGT
TCATTGCTGGGCCGGTGAAGAGAGGGGCACGCCCGATGTCTATTTTTTCC
GACACCTTGCAACTGAATTCATCTTTTTTGTCACTGTTACTTATTTCTTC
TTTTTATTTTCATTGTGTGACTTGGCTCTGGACAAAGCTCCCTTTTCTTG
TTCTATTTTTGTACAGCGTTGTTTGATTTCTCGGGGTCCGTTTTTGTTTT
GCCGCGGAGTTTCCCTGTTGTCCCTTTGTTTGGTGGATTGAGGGGATCTC
CCGCGTACTATATACTTCGTACCTCTTTTGGGGCAAGCAGCCTGTGACCA
CGGAAATCGTCCCGGATCGGTGGAGAACGGACATTAGAAGGTACTGAGGA
GAGATCGGAATGGTTTTTAATGTGAAGACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACACATACTTCTGCAAGACCGCTCCTGT
GGTTGAAGGTTTTAGAAGATTGAAGATTGGAATGGGGAAGGAATAAATAC
TTCACAAGTGTTGAGTGCTTCGTCACAGGCTGGCCTCGTTCGGGGCAACT
GAAGCAGAGTACAAGTAGCTCGGGGGGGATATTCACACCAGCAAATTATC
GGTCGTACAGCACTTGAACCATGTTTCTAGTGAGTTTTCCCTCTCTGGCA
GATGGTCTACAAGTAGAAAGAAATGCTCGGTTTGGCGTTTTGACCCTCTC
GAAGGGAATACAACCCTCTGCTCTCCGCGGACTTCTTTCATTCAGACTGC
AGCCCCGATGTTTGGGCCACCGGCTCAGACAGAGTGTTGAGTCTTGTGAC
ACGAGTTTGAAGCACACGCGAAGTGTTAAAAAAGTAAATTCTTCATGAGA
ATACATATTACTCAAGCCAGGTCCACGCAATTAGACAGCAACGGCAACAA
CACAATCTCGGGCCTTACGGGCATGTCCAAATTCGTTCAATTATGCACAC
AGTTTAGTCTTATGATGTCGTATATATTAATGTTTGAATTTTTGAATTTT
TCATAGACAAAGTCGCGTTCATTTTTAATTTCATCCAGCCACCCCTACCA
AGTATTTCCACGCCGGCATACCGTCTAACAGGCTCATCTCTGTCTATCGT
CCGCCTTCCGTTAGAAACGCGGGGTGAGACAGAGCGTTTTCTCACACACA
CACACCTACCCACCCCCTCTCTTGTTTCTGCGGGCGTGCAGCCTGGTTGG
TCTAGAGGGAGAGTCCTCGCACGAAAATCTGTGAAAGTTGCCGTTGAGTT
TGTGGATTATCTTTGCACTGGTCCCCGGAATCTTGCGCGATGCGTTCGTG
GAAAAGACCCTCGTTGCAAGGAATTGAAAACACCCTGTCAAGGTTTTCCC
GTTTTCTTCACGCGCTCCGTATCTCTTTTTCTCTATCTCTCGTTCTCCCT
CTCACTCTGGCCGTCTCTGCCTGCCTCCTTCCCCCTGGTTGAATTGATGA
CTCGTTCTGAATGCATGCGCTCGGCATGCAGGTGATGCACAAGCTTGTCC
ACCCTCATATCGTGGGCTACCTTGGAGCGGAGTTGCAGGACAGCAAGCGG
AGGCTGTGCATTTTTCAGGAGTGGGTCCCCGCGGGTTCGCTGCACTCCCT
GCTCGACCAGTTCGGCTCCCTGAGCGACGCCATGACCCGCAAGTACACCA
GGCAGGTACTGGATGGCCTCATCTACCTGCATGCGCATCGCGTAATACAC
CGAGACGTCAAGTCCAAGAACATCCTCGTGGACGACAGAGGAAACGTCAA
GGTGGGTGGGTGGGTGTTTTGGCATGGGGGCGGCGGGCCGGCCCTACCCG
CGGATCTTTTCTGTTTTGAAACAACCTCCTGCAAAAAAACGTGACACCTA
GTAGAAACTCTTCGTTACAACAAAGGCAAGAGTTGTCGGAATAAAATGAC
ACGGTGGACTGAAATTTGCCGGTTTCCGTCTCCTTTTTTTTCGTGTCTTG
TTTGATCAGCTGGCAGACTTTGGCTGCGCGCTTGTGTTGAAAGACGACAA
CGGTGACGGGGTGGAAATGTCCATGAAGGGAACGCCGCTCTTCATGGCGC
CGGAGATGCTCCTCAAGCGCAAGTGTGGGAAGCGGGTCGACGTTTGGTCC
CTGGGCTGCGCCGTGCTCGAGATGGTCACGACCCGCCCGCCCTGGGCGGA
CACGTTCAAGCACCCGGTGGAGATAATCGAGCACTTCAGCGAGAACCCGG
GACCGCCTCCGCTGCCAGAAGATAAGCTTTCGCCATCCTTGCGGGACTTC
CTCCTCTCGTGCTTCACGTGGGATGCGGCCAAACGTCCGACGTCCCTCGA
GCTCGGCGGACACGAGTACCTCCGCACGCCGCGCGCCGAGGACGGCAGCG
CTGGCGACGGTGGCAGCCCCGGCGGCGGTGGCAGCCCCGGAGGCGACGAT
AACGAAATCCCACTAGAGGCCATGGGCCGCGCTCCGTTCATGTCGCGCAT
GCGCAGGTGCAGCAGCGCGACGCTGCCCGATCTCCTCTCGCGGTCGCAGG
TCCTCCGCGGCGCTGACGCGTTTGCGGCCTCCGGCACCGCTCCGGTGGGC
ACACTCAGGCCGCCGTCCCCACGGTACGGCCCCGGGGGTGTCGCGGCACA
CAACAAGCGCACCACCCCGACGCGCCGACGCGTGTACACGGAGGTGGCCA
TGCCGCCCCCAGAGAGCAGGGGTCTGGTCCGGAGGTCTTCGATGCCGGCC
GGGCGATCACCCCCCATCACTCCCGAGAAGCCGAGGCGTCCTGGCAGAGG
CTCTTCTCCGGGGCGGGGCACGAGCCCGTCGAATCGCCGAGCGGCGGAAG
AGGAAGGTGCGATGGACTCTGGTCCTGTCATGCACGCGCGGCTGCGCAGC
CCCGGGGACGGCATCGACGGCGGGGATGGCGGCGACGGTAGTAAGAGCAG
TACACGAAATGGCGGTGGCATGAGCAGATGCACCAGCAGCAGCGGTAGTG
GGGGGCGAACTTACACAGGAGCGTCGGTTTTGAGGTCCTCCTTGATGGCG
GCAGGAGCAGACGCAGGAGCGCTGGCGGCAGCCGACGCTGCTGAGGGTCC
GAGACAAGCGGCCCCGACGCCGATACTCCCCCCCGTCTTGCGAGAGCTGC
TCGGGACACTAGACCACGGCGGCGGCGTGCAAGGAGCTCCGATGTGCGTT
TTCCATGCGGGGGACACTCCGCCTCCGACCGTGCGGCCGTTGAAGCTTCA
TCACTCCGTGTCCGCCCGGTCGTGGAGAGGGGGCTGCAGTGGCGTGTCAG
AGCAAGACGCTCAGCTGCAGCGTGACGAGGGGGCGGGCGTCGGCGGGAAT
GGGGGTGAGGTATGGATGGCGTCGGCCGCCGAGCGAGGAGAAGCCATGGC
AGGCGTGCGCGGCAGCAGCGGCAGCAGCGGTGGCGGCGGGCTCGGCTCTC
GCCACTTGGCTGACAGGGGGGAGTAGATGGCTTGTTCCAGGCAACGGGGG
AAATAGGCGCCTGTTATAGCCCACGTGTGATGTATGTAACGGTGTCCATG
ATGTTTGCACGGACAGAGGCTTGTCCGTGTTCGTTTCGTGTATGTATGGA
AGAGTGTCTGTGTCTCTACATCCCGGGCCGAGTCTTAGCGGTAACCAAGT
CTGTGGCGGGTGTGCGTTGTGTATGAAGTGTTTTTTGGGGAGGGGGGCAT
CGTTACGCCCCCCTCCTCTCCTCCCCCCCCCCCCATCCCTTCGTTGTTCG
ACCCATGTCGTGGGAGTTCTGGGTGTCGTCAAACTGTGTAGACAGGCGGT
TGTTTTGTAAAATACGTATCCATGTGGGAGCGTCTTTGCCTGCATCGGCA
CGGATTTTTATTTCGATGGTGTTAAACAGAGTGAGTGAGTTTGAGTCGTG
GGGGAAGAGCTAAAGAGGCGGCGGCCGGCCTTCGAGTTCGCATGAGTTGT
GTATTTGGAGATGAGGGAGGAAGGTTACAGCTGCATTTCGGCACGTTCAT
TTTCATGCTATTTATCAAGGCTTAACAAAAAACAATGGCTTTAATGGAGA
GGAAGCACTTGTGTGTGCGTTCGTGCGTGTGTTATTTGTGTGTTTTGTGT
GCGCGCGCGTCTCCTGCGTGACTGCTGGTCGAAGGTGGTGGTTCCGATTG
TTAAATCGACGCGAAAACTAGGGTAGGCTTCAAGAAAAGAGACAAGCGCG
GTATGTGTGCGTTAATTCGTGTCTTGGTTGTTTTTGACGTCCGTAGGCTA
TAATACAGTGGTGAGGTGGGTGGGGGTTTGGGTGTCTTGGTTAGAGTCCG
TTGTTGCAGGCGACGAGGAAATAGTATCGATGGGTTAGTCATCAAATCTG
GAGGCCTGTTGCTGAAAGTCACGGAAGTTTAAGTTGGTTGTTGGGTGATG
TGGAGGGTGAGTTCCTCGTAATATGCCTTTGTTGCATTCTTCGTTGAGTG
GTGTGCGGTTGATATCTCGATGTGTGTTTTTGTTATTTAAGTCGCCGTTC
TGTGTTTTCGAAAATTTCGTCGTCGTGACAGAGCAACTCATTCGGTAGCT
GCCTTTGGCGTGTGTGACATGCCGAGATATGCCGAAGTGTACCCCAGCGG
TGAAAGGTGAAAGACAGATCTCCCCGGTGCATTACTGATTCGCTTCACTT
TACTCAGTCCGATTCATTCAGCGTTGTTCGAGGAACATTGGTCTCGGGAA
GTGTCGGGGGCTCGTGTTTTTTCGTGAATGCTTTCGGCGGTCTGGGTCAA
TTTCATGCTGGCTTGGTGTTGCTGTATGTTTTGTCGGCTCTGAAAAACGG
TATGCGGAGGCTCTTTCCCTGGGAGCGGAAGGCACTTCATTCGAGGCATC
AAGAACTTGATCACGTTTATGCACGGAGGGTTGATTTATTCTTGATGTCC
CTCCCGCCCCCGCTCAAAAGGACATACATTTGCGGCAACGAACTTTATCA
GTTTCAGATATAAACATAACGCAACATCCGTTCGCGTGTCGACGCCCTTT
TGTTTCGATATTCTCGAAGTTGTGGCATGGACCTAAAATCAAATGATCCG
TGAGAGTGCGATTCACAGGGGGAAGACTTTGACCCTGGTACAGTAGTCGT
TTTCAAATCAGGCGGGATAGATGTGTAATATGTGTAATACAGTCCATGAA
AAAAAGGAGGGAGTTTCGCGTGTAGGCTCTCAAGAACTGGACAGCATACA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig988:10072..20421+

>mRNA_P-littoralis_Contig988.1.2 ID=mRNA_P-littoralis_Contig988.1.2|Name=mRNA_P-littoralis_Contig988.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2919bp|location=Sequence derived from alignment at P-littoralis_Contig988:10072..20421+ (Pylaiella littoralis U1_48)
ATGATGCTGATGGGTACGGAGGGTGGGAGACCAGCGGTAGGAGATGCAGC
GGAGGGGAGCACGAGCCCGGGGAGCGCGGCCACGGACGACATCACGCCCA
CTCCACAACCTCCTCCTTCCCCCTGTCTGAACGAAATTGGAGACGATGAC
GCCACTCCCAGACAGCAATGGTCGCCAGTCTACACGGTAGGAGGCGGGCG
CTCATCAGGAGCCAACCCAAACAACAACCGGGGGTATCACGGCCGGGCGT
GTGGCGGTGGCGGTGGTACCTTCACCACGGCCGGCTGTACCAGTGAACAG
CAGCAGCGGGTTCACTCCGCGAGGAGTACCACGAGCAGCACTGGGGACAA
CAACAATGGCAGTAGCAGCTGCAGCCAGACAGCAGTAAATATCAAGGGCG
GCGGAGGATACGCGGGAACTTTTTCCAACAATAATTTCCAAGGAGTTTAC
CCTCAACAAGCACTTCACCAGAGGCCTCGTTTGGCCTCCTCGCGGCCCGA
CTCCCCCGTGCTGCGCGTGGACCTCGAGCGCCTGGACCTGAACGCCCTCG
CGCTGGGGGAGGAAGGTGGCCCCACCGTTCCCCACCATGGAACCGGCGCC
GGTGGCGCCTTCGGCGGCATCACAAGCGCTGGGAGCAGCAGCAGCCGGTA
CGGCAGAGGAGAGCTCGTTCTCCACCCGGGAGACACGTTTCGGTCCGAAC
ATGGGGCGATGGTCCAAGGTATGCGCCCGCGGTCACTCGGGGGAAGGCCA
AGCCGAGCACATGCGCTCTTCGTGGCACCGGGGCAGCTGGGCACCGGGCC
GGCGTCGCCCCCCTCCAGCTACTCTACGCACTCGGAGAGCGGCGGATTCG
CGTCCCCGACGACTCGGCTCGCGAGTCCGTTCGGGCAGCACTTTGTTGGG
TTTGTTGGGAGTGGTGGAGCTGGGAGCAGCAGCAGTGGGAGTGGGGCAGG
AGCAGGGAGGGATTACCATCATCATTACCATCAACAACAATATCACCACC
ACCACCAGCCGCAGGGCAGGGTGAAGAAGGGTCACTGGAAGAAGGGGAAG
CCGATCGGAGTGGGCAGCTGCGGTAACGTGTATCTCGGTATGAACGAGGA
TACGGGAGAGCTGATGGCGGTCAAGGAGATCACCCTGGAAACCAAGGATA
GATTGCTCACCAGTCTCTACAACGAGATACAGGTGATGCACAAGCTTGTC
CACCCTCATATCGTGGGCTACCTTGGAGCGGAGTTGCAGGACAGCAAGCG
GAGGCTGTGCATTTTTCAGGAGTGGGTCCCCGCGGGTTCGCTGCACTCCC
TGCTCGACCAGTTCGGCTCCCTGAGCGACGCCATGACCCGCAAGTACACC
AGGCAGGTACTGGATGGCCTCATCTACCTGCATGCGCATCGCGTAATACA
CCGAGACGTCAAGTCCAAGAACATCCTCGTGGACGACAGAGGAAACGTCA
AGCTGGCAGACTTTGGCTGCGCGCTTGTGTTGAAAGACGACAACGGTGAC
GGGGTGGAAATGTCCATGAAGGGAACGCCGCTCTTCATGGCGCCGGAGAT
GCTCCTCAAGCGCAAGTGTGGGAAGCGGGTCGACGTTTGGTCCCTGGGCT
GCGCCGTGCTCGAGATGGTCACGACCCGCCCGCCCTGGGCGGACACGTTC
AAGCACCCGGTGGAGATAATCGAGCACTTCAGCGAGAACCCGGGACCGCC
TCCGCTGCCAGAAGATAAGCTTTCGCCATCCTTGCGGGACTTCCTCCTCT
CGTGCTTCACGTGGGATGCGGCCAAACGTCCGACGTCCCTCGAGCTCGGC
GGACACGAGTACCTCCGCACGCCGCGCGCCGAGGACGGCAGCGCTGGCGA
CGGTGGCAGCCCCGGCGGCGGTGGCAGCCCCGGAGGCGACGATAACGAAA
TCCCACTAGAGGCCATGGGCCGCGCTCCGTTCATGTCGCGCATGCGCAGG
TGCAGCAGCGCGACGCTGCCCGATCTCCTCTCGCGGTCGCAGGTCCTCCG
CGGCGCTGACGCGTTTGCGGCCTCCGGCACCGCTCCGGTGGGCACACTCA
GGCCGCCGTCCCCACGGTACGGCCCCGGGGGTGTCGCGGCACACAACAAG
CGCACCACCCCGACGCGCCGACGCGTGTACACGGAGGTGGCCATGCCGCC
CCCAGAGAGCAGGGGTCTGGTCCGGAGGTCTTCGATGCCGGCCGGGCGAT
CACCCCCCATCACTCCCGAGAAGCCGAGGCGTCCTGGCAGAGGCTCTTCT
CCGGGGCGGGGCACGAGCCCGTCGAATCGCCGAGCGGCGGAAGAGGAAGG
TGCGATGGACTCTGGTCCTGTCATGCACGCGCGGCTGCGCAGCCCCGGGG
ACGGCATCGACGGCGGGGATGGCGGCGACGGTAGTAAGAGCAGTACACGA
AATGGCGGTGGCATGAGCAGATGCACCAGCAGCAGCGGTAGTGGGGGGCG
AACTTACACAGGAGCGTCGGTTTTGAGGTCCTCCTTGATGGCGGCAGGAG
CAGACGCAGGAGCGCTGGCGGCAGCCGACGCTGCTGAGGGTCCGAGACAA
GCGGCCCCGACGCCGATACTCCCCCCCGTCTTGCGAGAGCTGCTCGGGAC
ACTAGACCACGGCGGCGGCGTGCAAGGAGCTCCGATGTGCGTTTTCCATG
CGGGGGACACTCCGCCTCCGACCGTGCGGCCGTTGAAGCTTCATCACTCC
GTGTCCGCCCGGTCGTGGAGAGGGGGCTGCAGTGGCGTGTCAGAGCAAGA
CGCTCAGCTGCAGCGTGACGAGGGGGCGGGCGTCGGCGGGAATGGGGGTG
AGGTATGGATGGCGTCGGCCGCCGAGCGAGGAGAAGCCATGGCAGGCGTG
CGCGGCAGCAGCGGCAGCAGCGGTGGCGGCGGGCTCGGCTCTCGCCACTT
GGCTGACAGGGGGGAGTAG
back to top