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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 660 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Cds size | 534 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791904.007432-UTR-P-littoralis_Contig981:43353..43477 | 1680791904.007432-UTR-P-littoralis_Contig981:43353..43477 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig981 43354..43477 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791904.0248625-CDS-P-littoralis_Contig981:43477..43599 | 1680791904.0248625-CDS-P-littoralis_Contig981:43477..43599 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig981 43478..43599 + |
| 1680791904.0353642-CDS-P-littoralis_Contig981:51134..51546 | 1680791904.0353642-CDS-P-littoralis_Contig981:51134..51546 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig981 51135..51546 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig981.12.1 >prot_P-littoralis_Contig981.12.1 ID=prot_P-littoralis_Contig981.12.1|Name=mRNA_P-littoralis_Contig981.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp
MLSFAKRLSFSSSRSSGRGGAAARSAISTAERTTRRLLHNRTAATALSFA
TRISGCVTHPKRISHRWPAQPRGSTRISGGGGGGSGIGIGTTGGAVRLPS
AHGSCATTAAFHRAVVARRQRTGSANSTAAAAAPFSATIATTQQQRGGNY
QFPGLGGAGAGAGGASTGRWRDHHTGHA back to topmRNA from alignment at P-littoralis_Contig981:43354..51546+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig981.12.1 ID=mRNA_P-littoralis_Contig981.12.1|Name=mRNA_P-littoralis_Contig981.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8193bp|location=Sequence derived from alignment at P-littoralis_Contig981:43354..51546+ (Pylaiella littoralis U1_48)
CCGCTCACCAGCTCACATCTCCTCTCTGAGCCCCGACAAGCGGGCTCTTC
CATAAAATTCCACCCCACCGACGCGCGGAGAGAAGGAGCAAGGGAGACAG
CGAGGTATAGCATTGTTGGAGGCCATGCTCTCTTTCGCCAAGAGATTGTC
CTTCAGCAGCAGCAGGAGCAGCGGCAGGGGCGGGGCTGCTGCAAGATCGG
CGATATCAACGGCCGAGAGAACCACGCGTCGTCTTCTTCACAACAGGTGC
GCTCTCAGAATTACAAGAGTAGGGAGAGAGGCGGACAACGACGGTTTATC
GTTCGACCCCCGTCACTTGAGCGTGGTCAACTCTTCCGTAGTCTCTGTGG
TTCAGCCTTGAGGGTAGTACAGCAGTAGTGGACCGCGCGCGAGACCGTCT
TGGCAGTTCTACTGGCGCAGGTGGCATAGGTGTGAAAATGTACTCCTCTC
ATCTTATTATATTATACTCGGAGTACATACATAATATCATACCATCGTAC
CCATGACACTGTTCAGAGTTACTGCTGTTGTAGAGGTTTTCATCTGGTAT
TTATTCCTTTCTCCACAACAGCAGTCCAGTCACAACGTCTGTGCTCTCTC
TCTGTCACAACCGGTCTTCTCGGCCACGTTTCAACATATGTACATCCACT
GCTGCTGCTGCTGCTGCTGCCGGTACTGTGATCTATACTTCGGATAAGCG
TGCACGTGTAAAGCAGCCCAAGCGGACTGTCGGTGTTGTTGTTGAACCTG
GTAGGCTGTTGGGCGGGTGGTCCGCATAACTTCTACCCGACTTTCTACCT
GCTACCTTCATACGATTCCATTATTATGGCATCATATATTATCCCTCTGA
AACTTCTAGATCATTGGAGGGTACGTTCGTGCTTCATACAAAATGTCACT
GATGACGCTTCATCTACGTAGCAGCTGTATAAAGCCAGCTATGAAGCACA
TCACACGCCTACGTACAAAAAAAAATAATAAGCGCGGTGAATAGGAATTC
CTTTTTTTTTTTAAACTTACCAAAACATCAATAAAAAAAAATTAAAAATG
AGTTTGCGCAAAAGTAATTGCCTTTTGACAGAACACACACACTCTCGTAT
GCTATTATTAATAGTGCAGAGCAACAATCCAGACACATACCGTACGCCCA
CACACACGGCTGACGATGTGCTGCTGCTGTAGGATAGCCAAGACAACGAG
TCTTTGGTTCAAGTAGTGGGGAAGGGTGCCGGGTCAACCGAAGTGAATGC
AAACTCAGGGGTCACGGGCAGCAGGGATGGGGCAAGTTCGGCAGAGAGGC
TGTAGTTGTGGAAGAAGGCATGATTGATGTGTGTCAACTATACTGCTGAA
CTTTAATTGAGTACAGAGCATCTAACTGCTGTATGATACGGAGTATGTTC
TATTTTCAAGTGCAAACAAAAGAGGTCGTTTGCATTTTCAGCGTGCTAGG
TGTAAACCTCGAGCGATACTTCTCTCCACCGGTTGAATGAACCCACTTCC
GACCCAACCTCCTGCGGACGGAGAGCAGTATACAGAGGAGACAGCAAAGA
AGTTTTCACCTTGATACGTGGTGTAGAGAGCGAGAGCGTGACTGCTGTGA
CTGCCGGTGTTCTAATCATTTCTGTGTCCCGCGACAGCTTTATGTTGCCT
CTGCTGCGGACGCAGCCAGCCCACACTCGCTAATGTCAAAGAGTCGCTCA
GATGCTATGTTTAGCACGGCTGACACGCTTCCACCACATGAATCAGCGAC
GAAGGTGTTGGAACAGTGATTGCAGGGGGGTCGTAGGGAACCCTTTTTGA
GCTCGCTGCCTTCAAAAATCACGGCGCAGTGATCGGTGTTGTCAACTGAA
ACGTAGTGGTGTATCGTCATCTTCTTTAATAGAACACTGTTGCGGAGAGT
CCGGGGTGATTTGGCCAATCACGTGATGTGCCGACATGGGCTCGCCTGGC
AGATCAAATATTCTTTCCAAATATCCCTTCATCCCGGGATTTTCTGGAAT
TAGAGTGTATGCGAAATACTCCGGAGTAGAATATCTTATCTCAAATATCC
TTTCTTGGAAAAAAAAAATAATAAGCGCGGTGAATAAGAATTCCTTTTAA
CGAAAATTTGGAAATGAGTTTGCGAAATAGAATATCCTTTCTGACAAAAA
CATTTACCAGGTAATCTACACTTTGCTGTGAGAGTGCAGAGCAACACAAA
CAAATACAAACACACACACACACACGGCTGATGATGTGCTGCTGCTGTAG
AGACAACACAATGAGTCTTTCGTTCAAGTGGTGGTAAAGGGTGCCGGGTC
AAGCGAAGTAAATGCAAAGTCAGGGGTCATGGGCAGCAGGGATGGGGCAT
GTTCGGCAGAGAGGCTGTGTTGTGGAGGAAGGCCTCACTACTTCGTGTCA
ACTGCTGTTCTATTTTGGCCCCTCTATTTTCATGTGCAAAAAAAGGTCGC
TTGCATTTCCAGCGTGGCCGGCCAGACCTCGAGCGATGCTTCTGCTTCTC
TCCACCGATTGAATGAGCCCACCTCCAACACAACCTCCTGCGGACGGAGA
GCACTTTATAAAGGAGACAGCCAAGAAGTGTTCACCTTGATACGTGGTGT
AGAGAGCGAGAGCGTGACTGCTGTGATGTTCTGATGTCTGTCGCGGTCAG
CTGCTGTGTGCCTCTGGGGACGCACGCCAGCCCACACTAAATACTTTCGA
AGAGTCGCTGCTCAGACGATATATTTTGCATGGCTGGCACACTTCCACCA
CATGAACCAGCGGCGAAGGTGTTGGCACAGTGACTACAGGGTTGCACGGA
ACCCTCTTTGAGCTCGCTACCTTTAGAAATCACGGCGCGGTGGTCGGTAC
TGTCGACTGAAGCGTAGTGGTGTATCGCCATCTTGTCGCATATCACACCG
GCCGGGTGATACCGGGGTGATTTGGCCAATCACGCGATGTGCCGACAATC
ACACGATGTGCCGACACGGGCTCGCTTTCCAAATCAAATATTCTTTTCAA
ATACTCTTTCTTGCCGGGAATTTCCGGATTTTGAGATCAAATATTAATAT
TCTTTTTGGTGAAGCCACGGGGCCTCTCGGGGGAACCTCGGGGAAACCAA
GAAAGGATATTTGAGATAAGATATTAGAGTGTTTGCGCAAAAGGATTTAT
TATCTCAAATATCCTTTCTTGGTTCCCCCGACGTTTCCCCGAGAGGCTCC
GTGACTGCAACAGAAAGGATTTATTTTCTCAAACTCCGGAAAATCCCGGC
AAGAAAGGATATTTGGAAAGAATATTAATATTTGGTCTGCCAGGCGAGCC
CATGTCGGCACATCACGTGATTGGCCAAATCACCCCGGCCTCTCCGCAAC
AGTGTTCTATTAGAGAAGATGACGATACACCACTACGTTTCAGTTGATAA
CACCGATCACTGCGCCGTGATTTCTGAAGGCAGCGAGCTCAAAAAGGGTT
CCCTACAACCCTGCAATCACCGTGCCAACACTTTCGTCGCTGGTTCATGT
GGTGGAAGCGTGCCAGCCGTGCAAAACATAGTATCTGAGGAGCGACTCTT
TGAAAGTAGCGAGTGTAGGCTGGCTGCGTCCGCAGCAGAGGCAACATACA
GCTGTCGCGGGACACAGACATTAGAACACCGGCAGTCACAGCGGTCACGC
TCTCGCTCTCTACACCACGTATCAAGGCGAAAACTTCTTTGCTGTCTCCT
CTGTTTACTGCTCTCCGTCCGCAGGAGGTTGGGTTGGAAGTGGGTTCATT
CAACCGGTGGAGAGAAGTATCGCTCGAGGTTTATACCTAGCACGATGAAA
ATGCAAACGACCTCTTTTTTATGCACTTGAAAATAGAACGTACGTATCAT
ACAGCAGTCAGCTGCTCTGTACTCAGTTAACAGCAGTATAGTTGACACAC
ACCAATCATGCCTTCTTCCACAACCAAAGAAAGCCTCTCTGCCGAACTTG
CCCCATCCCTGCTGCCCGTGACCCCTGAGTTTGCATTCACTTCGCTTGAC
CCGGCACCCTTTCCCACTACTTGAACCAAAGACTCGTTGTCTTGGCTATC
CTACAGTAGCACATAATCAGCCATAAGATATGTGTGGGCATGTGTGTCTG
GATTGTTGCTCTCAGCATACGAGAGTGTGGGTGTTCTGTCAAAAGGGCGC
GTAAAACAAATTTTATTTAAAAGGAACTCTTATTCTATTTCGCGAACACC
CTTTTTGAGAAAAGAAATCTTTTCTGTTGCAGTCACGGAGCCTCTCGGGG
AAACCTCGGGGGAACCAAGAAAGGATATTTGAGATAATAAATCTTTTTGC
GCAACCTCTCTATTATAAACCGCTATATTAAAGAGTTTGCCCAAAGGGAT
TTAGATTATTCATCTCAAATATCCTTTCTTCGATCCTCGTCTAGGGAGAG
GCGAACATAATGTCTTGGTAAGAAAAAAATATATATACTCGGAGTATATC
CTTTCTTGGAAAAAAAAAAAAAGCGCGGTGAAAAAGAAATCCTTGTATTA
AATGAAATTTGAAAATGAGTTTGCGCAAAAGGAATTCCCTTCTGACAGAA
CACCCACACTCTCGTATGCTAGTGCAGAGCAACAATCAGACACACACGCC
CACACACACGGCTGATGATGTGCTGCTGCTGTAGGATGGCCAAGACAACG
AGTCTTTGGTTCAAGTAGTTGGGAAGGGTGCCGGGTCAAGCGAAGAAAAT
TCAAACTCAGGGGTCACGGGCAGCAGGGATGGGGCAAGTTCGGCATAAAG
GCTGTAGTTGTGGAAGAAGGCATCATTGATTGGTGTGTGTCAACTATAGC
ACAGAGCAGCTGTACTGCTGTATGAGACGTCCTATTTTCAAGTGCAAACA
AAAGAGGTCGTTTGCATTTTCAGCGTGCTAGGTGTAAACCTCGAGCGATA
CTTCTCTCCACCGGTTGAATGAGCCCACTTCCAACCCACCCTCCTGCGGA
CGGAGAGCACTATACAGAGGAGACAACAACAAAAAATTCGCCTTGATACG
TGGTGTAGAGAGCGAGAGCGTGACTGCTGTGACTGCCGGTGTTCTTATGT
CTGTGTCGCGCGACTGCTGTATGCCTCTGCTGCGGACGCACGCCAGCCCA
CACTCCTACTTTCAAAGAGTCGCTCCCCAGGTGCTATGTTTTGCACGGCT
GGCACGCTTCCACCACATGAACCAGCGGCGAAGGTGTTGGCACAGTGACT
GCAGGGGGGTTGTAGGGAACCCTTTTTGAGCTCGCTGCCTTCAGGAATCA
CGGCGCAGTGATCGGTGTTGTCAACTGAAACGTAGTGGCGTATCGTCATC
CTCTCGCCTAGAACACTGTTGCGGCGAGGCCGGGCTGATTTGGCCAATCA
CGTGATGTGCCGACATGGGCTCGCCTGGCAAATCAAATATTCTTTCCAAA
TATCCCTTCATCCCGGGATTTTCCGGAATTTGAAAAAATAAATCCTTTCT
GTTGCAGTCACGGAGCCTCTCGGGGCAAAATCGGGGGAACCAAGAAAGGA
TATTTGAGATAATAAATCCTTTTGCGCAAACTCTCTATTACTACTGGTGT
TGTTTATGTGAACGATTGCACAGGTTGAAAATTGAAAACGATTTGTTATA
TTCAATTCATATGGAACTTTAAACTGGAAACCAATTACTTCCTCCGGAGC
ATATCATACGGAGTACATCAATAGATGACAAACTTGAAAACAGACACATA
TAGGCCGTACATGTTGATGTTGATTCTCACATTAGCTCATCGCCAAAATC
TAGCCCGTGGTCACAAAAAGTGGTGGGCCCTAGGAAGATCCAAAAACAGA
AAGAAACTACAAGGGAATACCCAAGAAAGACCGAAGAAGATACACCTTCC
TACGCCGTATGCATCACTGAACTACAGCAGTCACAGCAGTACCAACAGCA
AACATACTTCCAGCGTCGTTCATTTGACTACAACATCGTGTTCAGTCTCC
TCCCGCCCTACTTAAACAAGCAGTCAGTAGGTAGCTGCCGACTACAGCAG
TTAGTTGCTGTCTGGAGTGCTGCCTGCAACGTACAAGTAGCCCCGGCAAT
CGGAGAAGACAGAAAAAGAAAAACACAAAACCACACATGTATCATCAGAT
AGATGTTGTCGAGGATGGTGTCTCCATGCCGTCCTTGCGACGCTGGTATT
GATGTCGCCCTGAACATGTCCTCCTTGTCTAGGTCCACGTCGCTGTTGGC
GTTGCCCAAGGCCACATCACGAGCACCATGCTCTCGTAACGCTTCTTCAT
CATCACCGCCGCTCTCTCGCATATCACCTCCATCATCACCGCCGCTCTCT
CACATAACAGCTCTTTCTCGTTGTCCTTTCCAATCAGTTCCCTATAAAAC
TCCACTGTGCACTTGAGGTACAAGTCTTCTGAAAAACAAGTTCACGCTCG
GAGTGAGATCGACCAAGCTCTTCCCCGTTCGTCGGTGCTCGTCTACCTCC
GTCCTTGGCTGCGAAACTGGTTACTGGACGGCACAATCCCTCTGTGCATC
CTAGATCGTACCGTCTTTTTACCTGTGGTGTCGCCTGCCTCCGCGCACAA
ATGCTTGTGATGTACATTGCTGTACTGCCGCTGTAACCAAAAGGCCCGCG
AATCCGCACATTTGCACTTGGCACACCAACTGCGACCCAACTCTACCGCC
ACGCCCGTGGCGTTCGACCACAGCGCAGCAGCAAGAAGGTATCACTCCTT
GAGGGTGAGTCCGGCCTTACACCCGCCAGAAAGACCCCCCCAACTCGCTT
TGGGTCATGCTTACAGCAGACCTTGCCTAGGCAGCGAGGGAACGGAGTAC
ATACCACATAGTGTATCGTGTGTCACACAAGACGACTACAGTACCAAATG
GTCTTGTTGAGTCTGATAACCTCAGGGGAGCTGCACCGGTATGTTATCTG
CTGCCCTGTAGAAACACAAGTAGATGTATCACTCACTGTGTTCGTTGCTA
ATCTTGGTGGATCCTCGTCTAGGGAGAGGCGAACACACTGATGCCTTTGT
AAGAAAAATAAAAACTCTCGATTCGGGGTTCAATCCGCTCAGCTCAATAC
AACATGCACAGCATTCCGTTTCTCAAAGTCGAAAGAGCCGAGAGACCCCG
TTTCTTACAACCTCGTCTGGAGAGAGGCGAACACATTGATGTTTTTTTTT
TTCCGAACACATCAATGTGATTTTTCTTACAAAGACATCAATGTTTTTGC
CTGTAAGTAAAAAAAAAAGAAAATGACCATGCCGATCGATCTTATACTAT
TTCCGATCGAGCGGCGAATCTCCAAATAGCCCGATATTTCGCTTTTAGGA
CACAACACGTGACAACATCAATCGGTGCTCAGCCCCGAACACACCGATCG
CGACCATATCATACATTTTGTGGCGTACGCTCCTTCTGTGTTCTGAGCCT
TGGCCACGCCAAAAGGGTGTTGCGTTGCGTTGTGGGCTCCGTGTATAGAT
CGCGAGGTTTCGGTGGCGGAGTGGTCCGAGCTTCAATTTTCGATTGCAAT
TTCCGGTCGGTGCTCCAGCCGGAAATCGCCACCGGGAAAAGATATCAGGT
CGCCGACCGGAAACGGCGATCGAAAATTTAAGCTCGGACCACTCCGCCAC
CGAAACCTCGCGATCTGTACACGGAGCCCACGATATGCACGAATATCGTG
CGGCTAGAACCGCGTTTCGATTGGCCGGTCTCGGTCACTCCTCGTTTTGT
GTTTATTCACCAGGTACTTCGGTATTTATTAACCCTGGGGCCTTTTATCC
CTCGCCAAATTTCTGTTTCGTTGGTCGGCAGGACCGCGGCCACGGCGCTC
TCGTTCGCTACCAGAATTAGTGGCTGCGTCACTCACCCCAAGAGGATTAG
TCACCGTTGGCCAGCCCAACCAAGAGGCAGCACCAGAATAAGCGGCGGCG
GCGGCGGCGGCAGCGGCATCGGCATCGGCACTACTGGTGGTGCGGTACGG
TTGCCGTCGGCTCACGGCAGCTGCGCCACGACCGCTGCCTTTCACCGGGC
GGTGGTTGCCAGGCGACAACGGACCGGCTCTGCCAATTCCACCGCCGCCG
CTGCCGCTCCTTTCTCCGCGACGATCGCCACCACTCAACAACAACGCGGC
GGTAATTACCAATTTCCCGGATTAGGAGGAGCAGGAGCAGGAGCAGGAGG
AGCTAGCACAGGAAGATGGCGCGATCATCACACTGGTCATGCC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig981:43354..51546+ >mRNA_P-littoralis_Contig981.12.1 ID=mRNA_P-littoralis_Contig981.12.1|Name=mRNA_P-littoralis_Contig981.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=534bp|location=Sequence derived from alignment at P-littoralis_Contig981:43354..51546+ (Pylaiella littoralis U1_48)
ATGCTCTCTTTCGCCAAGAGATTGTCCTTCAGCAGCAGCAGGAGCAGCGG
CAGGGGCGGGGCTGCTGCAAGATCGGCGATATCAACGGCCGAGAGAACCA
CGCGTCGTCTTCTTCACAACAGGACCGCGGCCACGGCGCTCTCGTTCGCT
ACCAGAATTAGTGGCTGCGTCACTCACCCCAAGAGGATTAGTCACCGTTG
GCCAGCCCAACCAAGAGGCAGCACCAGAATAAGCGGCGGCGGCGGCGGCG
GCAGCGGCATCGGCATCGGCACTACTGGTGGTGCGGTACGGTTGCCGTCG
GCTCACGGCAGCTGCGCCACGACCGCTGCCTTTCACCGGGCGGTGGTTGC
CAGGCGACAACGGACCGGCTCTGCCAATTCCACCGCCGCCGCTGCCGCTC
CTTTCTCCGCGACGATCGCCACCACTCAACAACAACGCGGCGGTAATTAC
CAATTTCCCGGATTAGGAGGAGCAGGAGCAGGAGCAGGAGGAGCTAGCAC
AGGAAGATGGCGCGATCATCACACTGGTCATGCC back to top
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