mRNA_P-littoralis_Contig98.83.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig98.83.1
Unique NamemRNA_P-littoralis_Contig98.83.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE)

HSP 1 Score: 769 bits (1987), Expect = 1.540e-271
Identity = 387/434 (89.17%), Postives = 390/434 (89.86%), Query Frame = 1
Query:    1 RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSG----------------------------------HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPR TIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIR+GCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKM LRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGSVDNFDKLRAALGPEGG YSVRFDQAAAAQCE+FHP NKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRK+TEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDG WGYDQFEEQVEDVMDVLEH DPD QIVFEVDHSSG                                  HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTE  LGPEEA
Sbjct:  321 RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEA 754          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE)

HSP 1 Score: 710 bits (1833), Expect = 3.000e-253
Identity = 360/423 (85.11%), Postives = 365/423 (86.29%), Query Frame = 1
Query:   82 EEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAAL--------------------------------------------------GPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            +EDLKS LLAWMIS PR+TI+DVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIR+GC+YERATKSFYTDTHEKKEVVEYRGEYIEKRRKM LRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGSVDNFDKLRAAL                                                  GPEGG YSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKK LTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE LGPEEA
Sbjct:   13 QEDLKSELLAWMISPPRVTIEDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCKYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALDAARTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKPLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEA 435          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE)

HSP 1 Score: 697 bits (1798), Expect = 8.160e-247
Identity = 356/401 (88.78%), Postives = 360/401 (89.78%), Query Frame = 1
Query:    1 RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKE-DLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPR TIK+VCKYINGPLLQDDKE DLSRLHAYQVNLPVSMST HSWMIR+GCRYER TKSFYTDTHEKKEVVEYRGEYIEKRRKM LRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVD LRDDGSVDNFDKLRAALGPEGG YSV FDQAAAAQCEHFH PNKCRCG+KVHHIGQDESAYKA   E   W                   SG    RHGFGLPISDADLAAVN+KRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEH DPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLR SVMTEE LGPEEA
Sbjct:  274 RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVCFDQAAAAQCEHFHLPNKCRCGRKVHHIGQDESAYKA---ENGVWF------------------SG----RHGFGLPISDADLAAVNSKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRLSVMTEECLGPEEA 649          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE)

HSP 1 Score: 558 bits (1437), Expect = 8.890e-191
Identity = 277/399 (69.42%), Postives = 319/399 (79.95%), Query Frame = 1
Query:    4 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            WLRDFR  GGF+RD+RG HE DWIMSEEDLK  L+ WM +Q RLT KDV                        NLPVSM+TTHSWMI +GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ LRQPLWVRVQR  L  EE+ RLD +K  GP  DF AEVYDC ++G++CIEFHVD LRD+GSVD FD LRA LGPEGG +SVRF++AAA  CEHFH P KC+C +KV HIGQDES YKAYAREGKEWV++GVRGLRKKTEGPGEMVS FQDERHGFGLP++D  L AVNA+R E+  GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+ED +DVL+  +PDMQ+V E+DHSSGH +QREDGLHV NMNVKYGGKQKVLRD+VMTE  LGPEEA
Sbjct:  405 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAKDV------------------------NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEA 775          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 3.580e-170
Identity = 263/400 (65.75%), Postives = 277/400 (69.25%), Query Frame = 1
Query:    1 RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            RWLRDFRKEGGFRRDARGAHE DWIMSEEDLK  LLAWMI QPR+T+KDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTH WMIR+GC+YERATKSFYTD+HEKKE                                EEVDRL+SLK+RGPEG FYAEVYDCKIDGQDCI FH+D LRDDGSVDNFDKLRAALGPEGG  S RFDQAAAA    FHPPNKC CGKKVHHI +DESAYKA                                                                      FLEYGKGK+GYWGYDQFEEQVEDVMDVLEH DPDMQ+VFEVDH+SGHGKQREDGL++SNMNVKY GKQKVLRDSVMTE  LGPEEA
Sbjct:  232 RWLRDFRKEGGFRRDARGAHETDWIMSEEDLKGKLLAWMIPQPRVTVKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHPWMIRLGCKYERATKSFYTDSHEKKE--------------------------------EEVDRLESLKARGPEGGFYAEVYDCKIDGQDCIAFHLDLLRDDGSVDNFDKLRAALGPEGGDCSFRFDQAAAAPVRAFHPPNKCNCGKKVHHIEEDESAYKA----------------------------------------------------------------------FLEYGKGKEGYWGYDQFEEQVEDVMDVLEHIDPDMQVVFEVDHASGHGKQREDGLYLSNMNVKYEGKQKVLRDSVMTEGCLGPEEA 529          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 6.770e-160
Identity = 253/417 (60.67%), Postives = 296/417 (70.98%), Query Frame = 1
Query:    4 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRG-------------------VRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEE 1197
            WLRDFR  GGF+RD+RG HE DWIMSEED K  L+ WM +Q RLT+KDV  YIN  L  +   DLSRL +YQVNLPVSM+TTHSWMI +GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ L QPLWVRVQR  L  +E+ RLD +K  GP  DF AEVYDC ++G++CIEFHVD LRD+GSVD FD LRA LGPEGG +SVRF++AAA  CEHFH P KC+C +KV HIGQDES YKAYAREGKEWV++G                   VRGLRKKTEGPGEMVS FQDERHGFGLP++D  L AVNA+R E+  GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+          +PDMQ+V                               VLRD+VMT+  LGPEE
Sbjct:  391 WLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIK--GPAEDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVV-------------------------------VLRDTVMTKGCLGPEE 772          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 1.410e-148
Identity = 239/399 (59.90%), Postives = 277/399 (69.42%), Query Frame = 1
Query:    4 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            WLRDFR  GGF+RD+RG HE DWIMSEEDLK  L+ WM +Q RLT+KDV  YIN  L  ++  DLSRL +YQVNLPVSM+TTHSWMI +GC+YERATKSFYTD HEKK+VV YRG+                             R+  +  R P GD                         +GSVD FD LRA LGPEGG YSVRF++AAA  CEHFH P KC+  K+V HIGQDES YKAYAREGKEWV++GV GL KKTEGPGEMVS FQDERHGFGLP++D  L AVNA+R E+  GK+ LTRSPGL FL+YGK KDGYWGYD+F+EQ+          +PDMQ+V E+DHSSGH +QREDGLHV NMNVK GGKQ VLRD++MTE  LGP+EA
Sbjct:  325 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKGA---------------------------RVHRVPRRSPAGD-------------------------NGSVDRFDALRAELGPEGGHYSVRFEEAAALPCEHFHTPAKCKGNKEVRHIGQDESVYKAYAREGKEWVVQGVPGLWKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDTIMTEGCLGPKEA 669          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 4.610e-143
Identity = 248/491 (50.51%), Postives = 289/491 (58.86%), Query Frame = 1
Query:    4 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKS--------------------------------------------------------------------------------------RGPEGDF----------------------------------------------YAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSG 1080
            WLRDFR  GGF+RD+RG HE DWIMSEEDLK  L+ WM +Q RLT+KDV  YIN  L   +  DLSRL +YQVNLPVSM+TTHSWMI +GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ LRQPL VRVQR  L  EE+ RLD +K                                                                                       +GP  +F                                               AEVYDC ++G++CIEFHVD LRD GSVD FD  RA LGPEGG YSVRF++AAA  CEHFH P KC+C +KV HIGQDES YKAYAREGKEWV++GVRGLRKKTEGPGEMVS FQDERHGFGLP++D  L AVNA+R E+  GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+          +PDMQ+V E+DHSSG
Sbjct:  214 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLRVRVQRYTLTPEELQRLDGIKGPAEDFCAEVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAERGASASSSTSISCGTTAPSIDSTISVLNLXXXXXXXXXXXXXXXAEVYDCVVEGRECIEFHVDLLRDIGSVDRFDARRAKLGPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG 702          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 4.330e-135
Identity = 244/494 (49.39%), Postives = 290/494 (58.70%), Query Frame = 1
Query:    7 LRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTI----------------------------------KDVCKY------------------------------------INGPLLQDDKE---DLSRLHAYQ------------------------VNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEE 1197
            LRDFR  GG  RD+RG HE DWI SEEDLK  L+ WM +Q RLT+                                  KDV  Y                                    I GP  +   E   + SR+H +                         VNLPVSM+TTHSWMI  GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ LRQPLWVRVQR  L  EE+ RLD +K  GP  +F AEVYDC ++G++ IEFHVD +RD+ SVD FD LRA LGPEGG +S                                     AYAREGKEWV++GVRGLRKKTEGPGEMV  FQDERHGFGLP++D  L AVNA+R E+  GK+ LT+ P LRFL+Y K +DGY GYD+F+EQ+EDV+DVL   +PDMQ+V E+DHSSGH ++REDGLHV NMNVKYGGKQKVLRD+V+TE  LGPEE
Sbjct:  121 LRDFRGHGGSERDSRGVHERDWITSEEDLKDELIKWMRTQERLTVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAEXPGEPSRVHGHNPLLDDRAGVQVRAGYEVFLHGRPXVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAEEFGAEVYDCVVEGRESIEFHVDLVRDNDSVDRFDALRAELGPEGGHFS-------------------------------------AYAREGKEWVVQGVRGLRKKTEGPGEMVPAFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTQRPDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEE 573          
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 3.620e-132
Identity = 229/442 (51.81%), Postives = 264/442 (59.73%), Query Frame = 1
Query:    4 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGPEGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQIVFE-------------------------------------------VDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA 1200
            WLRDFR  GGF+ D+RG HE DWIMSEEDLK  L+ WM  Q RLT+KDV  YIN  L  ++  DLSRL +YQVNLPVSM+TTHSWMI +GC+YERATKSFYTD HEKK+VV YRG+YI+ +RK+ LRQPLWVRVQR  L  EE+ RLD +K  GP  DF AE                                                                          DES YKAYA EGK+WV++GVRG+RKKTEGPGEMVSGFQDERHGFGLP++D  L AVNA+R E+  GK+ LTRSPGLRFL+YGK KDGYWGYD+F+EQ+          +PDMQ+V E                                           +DHSSGH +QREDGLHV NMNVKYGGKQKVLRD+VMTE  LGPEEA
Sbjct:  136 WLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIK--GPAKDFCAE--------------------------------------------------------------------------DESVYKAYAHEGKKWVVQGVRGIRKKTEGPGEMVSGFQDERHGFGLPLTDDVLQAVNARRKEK--GKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEA 499          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L611_9PHAE1.540e-27189.17Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXL0_9PHAE3.000e-25385.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMQ7_9PHAE8.160e-24788.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K2T4_9PHAE8.890e-19169.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Y6_9PHAE3.580e-17065.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P7_9PHAE6.770e-16060.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN6_9PHAE1.410e-14859.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4M4_9PHAE4.610e-14350.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5X3_9PHAE4.330e-13549.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRV8_9PHAE3.620e-13251.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig98contigP-littoralis_Contig98:405874..407073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0S7H9
Model size1200
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.24e-20
EggNOG OGs2D06V@1|root,2SD1E@2759|Eukaryota
Cds size1200
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791901.523067-CDS-P-littoralis_Contig98:405873..4070731680791901.523067-CDS-P-littoralis_Contig98:405873..407073Pylaiella littoralis U1_48CDSP-littoralis_Contig98 405874..407073 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig98.83.1prot_P-littoralis_Contig98.83.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig98 405874..407073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig98.83.1

>prot_P-littoralis_Contig98.83.1 ID=prot_P-littoralis_Contig98.83.1|Name=mRNA_P-littoralis_Contig98.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=400bp
RWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRLTIKDV
CKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRVGCRYERATKS
FYTDTHEKKEVVEYRGEYIEKRRKMTLRQPLWVRVQRAALKQEEVDRLDS
LKSRGPEGDFYAEVYDCKIDGQDCIEFHVDFLRDDGSVDNFDKLRAALGP
EGGGYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGK
EWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEE
GNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHTDPDMQ
IVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEESLGPEEA
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mRNA from alignment at P-littoralis_Contig98:405874..407073-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig98.83.1 ID=mRNA_P-littoralis_Contig98.83.1|Name=mRNA_P-littoralis_Contig98.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1200bp|location=Sequence derived from alignment at P-littoralis_Contig98:405874..407073- (Pylaiella littoralis U1_48)
AGGTGGCTCAGAGACTTTCGGAAGGAAGGTGGTTTCAGGCGGGATGCACG GGGTGCGCACGAGCCGGACTGGATCATGTCAGAGGAGGATCTGAAGAGTG CGTTGCTGGCGTGGATGATATCACAACCGCGTCTCACCATCAAGGACGTC TGCAAGTACATCAACGGGCCTCTGCTCCAAGACGACAAGGAGGATCTTTC CAGGCTCCATGCGTACCAGGTGAACCTTCCGGTTTCGATGTCCACGACGC ACTCGTGGATGATAAGGGTGGGTTGCAGGTACGAGCGGGCCACCAAGTCG TTCTACACGGACACCCACGAGAAGAAGGAGGTAGTCGAGTACCGCGGCGA GTACATAGAGAAGAGACGCAAGATGACGCTGCGTCAACCTTTGTGGGTAC GAGTGCAACGAGCCGCTCTCAAGCAGGAGGAGGTGGACCGACTCGACAGC CTTAAGTCGCGAGGCCCGGAAGGAGATTTCTACGCAGAGGTGTACGACTG CAAGATCGATGGACAAGACTGCATCGAATTCCACGTAGATTTCCTGCGCG ACGACGGCTCCGTCGATAACTTCGACAAGCTCCGCGCCGCACTTGGTCCA GAGGGTGGGGGCTACAGCGTTCGCTTCGATCAGGCCGCTGCTGCCCAGTG TGAGCATTTCCACCCCCCGAACAAGTGCAGATGCGGCAAGAAGGTGCACC ACATCGGGCAGGACGAGAGTGCCTACAAGGCGTATGCACGCGAGGGCAAA GAGTGGGTGATTCGAGGGGTGCGCGGACTGCGGAAAAAGACGGAGGGGCC GGGGGAAATGGTGTCTGGTTTTCAGGACGAAAGACACGGTTTCGGCTTAC CTATTTCGGATGCCGACCTGGCGGCGGTGAACGCCAAACGCGATGAGGAG GGGAACGGCAAAAAAACCCTGACGCGAAGCCCTGGACTCCGGTTTCTTGA ATACGGAAAAGGCAAGGATGGGTACTGGGGCTACGACCAGTTCGAAGAAC AGGTCGAAGACGTGATGGACGTCTTGGAGCACACCGATCCCGACATGCAA ATAGTGTTCGAGGTCGACCACTCGTCGGGCCATGGGAAGCAGCGAGAGGA TGGTTTGCATGTATCGAACATGAACGTCAAGTATGGGGGGAAGCAAAAGG TGTTGCGGGATTCGGTCATGACGGAGGAGAGCTTGGGTCCGGAGGAGGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig98:405874..407073-

>mRNA_P-littoralis_Contig98.83.1 ID=mRNA_P-littoralis_Contig98.83.1|Name=mRNA_P-littoralis_Contig98.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1200bp|location=Sequence derived from alignment at P-littoralis_Contig98:405874..407073- (Pylaiella littoralis U1_48)
AGGTGGCTCAGAGACTTTCGGAAGGAAGGTGGTTTCAGGCGGGATGCACG
GGGTGCGCACGAGCCGGACTGGATCATGTCAGAGGAGGATCTGAAGAGTG
CGTTGCTGGCGTGGATGATATCACAACCGCGTCTCACCATCAAGGACGTC
TGCAAGTACATCAACGGGCCTCTGCTCCAAGACGACAAGGAGGATCTTTC
CAGGCTCCATGCGTACCAGGTGAACCTTCCGGTTTCGATGTCCACGACGC
ACTCGTGGATGATAAGGGTGGGTTGCAGGTACGAGCGGGCCACCAAGTCG
TTCTACACGGACACCCACGAGAAGAAGGAGGTAGTCGAGTACCGCGGCGA
GTACATAGAGAAGAGACGCAAGATGACGCTGCGTCAACCTTTGTGGGTAC
GAGTGCAACGAGCCGCTCTCAAGCAGGAGGAGGTGGACCGACTCGACAGC
CTTAAGTCGCGAGGCCCGGAAGGAGATTTCTACGCAGAGGTGTACGACTG
CAAGATCGATGGACAAGACTGCATCGAATTCCACGTAGATTTCCTGCGCG
ACGACGGCTCCGTCGATAACTTCGACAAGCTCCGCGCCGCACTTGGTCCA
GAGGGTGGGGGCTACAGCGTTCGCTTCGATCAGGCCGCTGCTGCCCAGTG
TGAGCATTTCCACCCCCCGAACAAGTGCAGATGCGGCAAGAAGGTGCACC
ACATCGGGCAGGACGAGAGTGCCTACAAGGCGTATGCACGCGAGGGCAAA
GAGTGGGTGATTCGAGGGGTGCGCGGACTGCGGAAAAAGACGGAGGGGCC
GGGGGAAATGGTGTCTGGTTTTCAGGACGAAAGACACGGTTTCGGCTTAC
CTATTTCGGATGCCGACCTGGCGGCGGTGAACGCCAAACGCGATGAGGAG
GGGAACGGCAAAAAAACCCTGACGCGAAGCCCTGGACTCCGGTTTCTTGA
ATACGGAAAAGGCAAGGATGGGTACTGGGGCTACGACCAGTTCGAAGAAC
AGGTCGAAGACGTGATGGACGTCTTGGAGCACACCGATCCCGACATGCAA
ATAGTGTTCGAGGTCGACCACTCGTCGGGCCATGGGAAGCAGCGAGAGGA
TGGTTTGCATGTATCGAACATGAACGTCAAGTATGGGGGGAAGCAAAAGG
TGTTGCGGGATTCGGTCATGACGGAGGAGAGCTTGGGTCCGGAGGAGGCG
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