mRNA_P-littoralis_Contig98.124.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 8.570e-23 Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 1
Query: 19 FTNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYLR 222
F NPLD WRK QLE+PLLAALARRVLAIPSSQAQSER+FS AGLTVTP R R L +++V+LLVYLR
Sbjct: 480 FNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSR---LLDENVELLVYLR 544
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 3.030e-14 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 4 DKTGA--FTNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYLR 222
DK GA + +PLDWWR +FP LA LARRVLAIP++QA+SER+FS AG VT R LA +V+LLV LR
Sbjct: 213 DKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNN---LAPTTVELLVLLR 284
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI0018AC93B5 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0018AC93B5) HSP 1 Score: 72.8 bits (177), Expect = 2.590e-13 Identity = 33/66 (50.00%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 22 TNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
TNPL+WW++++L FPL+A LA++ L IP++ + SER FS +G +T +R SCL D+VD LV+L
Sbjct: 369 TNPLEWWKQHELNFPLVARLAKKYLCIPATSSSSERAFSASGNIITCKR---SCLKPDTVDQLVFL 431
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI001B88B12F (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B12F) HSP 1 Score: 72.8 bits (177), Expect = 2.700e-13 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 25 NPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
NP DWWR N+ +P LA LARRVL++P++ SER+FSVAG TVT R + L +DSVD L++L
Sbjct: 410 NPFDWWRLNKTVYPTLAVLARRVLSVPATSVLSERVFSVAGGTVTKLR---ASLDSDSVDKLIFL 471
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 7.070e-13 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 28 PLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYLR 222
PL+WWR E+P LA+LARRVL IP+ QAQSER+FS AGL VT R R + ++V L+V+LR
Sbjct: 480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRAR---MDPENVGLMVFLR 541
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI00106AD7CF (zinc finger BED domain-containing protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AD7CF) HSP 1 Score: 70.1 bits (170), Expect = 2.340e-12 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 25 NPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
NPL+WWR+N+ EFPLL+ L ++ L I +S + SER+FS AGL TP R L + VD+LV+L
Sbjct: 375 NPLEWWRRNEREFPLLSQLGKKYLCIQASSSPSERLFSKAGLIATPARAN---LKPEKVDMLVFL 436
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI001470A045 (zinc finger BED domain-containing protein 1-like isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001470A045) HSP 1 Score: 68.2 bits (165), Expect = 2.680e-12 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 13 GAFTNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
G NPL+WWR N+ E+PLLA LA+R L +P + SER+FS AG +T +R SCL D V+ L++L
Sbjct: 135 GLNDNPLNWWRSNEKEYPLLACLAKRYLCVPGTSIASERVFSTAG-DITAKR---SCLTPDHVNELLFL 199
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 67.4 bits (163), Expect = 2.730e-12 Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 22 TNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
TN + WW+ N + FPLLAA+AR +LAIP++Q SER+FS AG V +R R L +++V++L +L
Sbjct: 101 TNVISWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSR---LCSENVEMLSFL 163
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: A0A820KUN0_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820KUN0_9BILA) HSP 1 Score: 66.2 bits (160), Expect = 3.010e-12 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 4 DKTGAFTNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYLR 222
DKT NPLD+WR+NQL FP L+ LARR+ +IP++ A ER FS AG+ + RR L VD ++++R
Sbjct: 47 DKTSLRQNPLDFWRENQLSFPRLSKLARRIHSIPATIATVERQFSGAGVVINERRTN---LKPSQVDNILFIR 116
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Match: UPI000904AA09 (zinc finger BED domain-containing protein 1-like n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000904AA09) HSP 1 Score: 69.3 bits (168), Expect = 4.490e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 25 NPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLTVTPRRPRRSCLANDSVDLLVYL 219
NPLDWWRK+Q+ FP L+ +A++ L IP++++ SER+FS G VT R SCL D V++LV+L
Sbjct: 431 NPLDWWRKHQVNFPTLSKVAKKYLCIPATRSPSERVFSSGGNIVTCLR---SCLKPDMVNMLVFL 492 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig98.124.1 >prot_P-littoralis_Contig98.124.1 ID=prot_P-littoralis_Contig98.124.1|Name=mRNA_P-littoralis_Contig98.124.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=74bp RDKTGAFTNPLDWWRKNQLEFPLLAALARRVLAIPSSQAQSERMFSVAGLback to top mRNA from alignment at P-littoralis_Contig98:575212..575433- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig98.124.1 ID=mRNA_P-littoralis_Contig98.124.1|Name=mRNA_P-littoralis_Contig98.124.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=222bp|location=Sequence derived from alignment at P-littoralis_Contig98:575212..575433- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig98:575212..575433- >mRNA_P-littoralis_Contig98.124.1 ID=mRNA_P-littoralis_Contig98.124.1|Name=mRNA_P-littoralis_Contig98.124.1|organism=Pylaiella littoralis U1_48|type=CDS|length=222bp|location=Sequence derived from alignment at P-littoralis_Contig98:575212..575433- (Pylaiella littoralis U1_48)back to top |