mRNA_P-littoralis_Contig98.115.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 256 bits (653), Expect = 7.400e-80 Identity = 120/204 (58.82%), Postives = 155/204 (75.98%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 612
QA+CDAQYRI AWTM+CPGSQNDRTAF + F KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+SQCR+AI QT+GILV RRWGILW+P+E+R+ +V ++VRLHNFCRDRKV+VPT G P + F+ G +D+FET P +GRP ++QA+ S PRE IR++LE G+ RP HNI+R+ R
Sbjct: 59 QAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV-RRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 261
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 260 bits (665), Expect = 1.250e-79 Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 612
QA+CDAQYRI AW MNCPGSQNDRTAF SGF KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+SQCR+AI QT+GILV RRWGILW+P+E+R+ +V ++VRLHNFCRDRKV+VPT G P + F+ G +D+FET P +GRP ++QA+ S PRE IR++LE G+ RP HNI+R+ R
Sbjct: 211 QAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV-RRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 413
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 228 bits (581), Expect = 4.550e-68 Identity = 112/203 (55.17%), Postives = 143/203 (70.44%), Query Frame = 1
Query: 4 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 612
A+CDAQYRI AW MNCPGSQNDRTAF SGF KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+SQCR+AI QT+GILV + + V +V ++VRLHNFCRDRKV+VPT G P + F+ G +D+FET P +GRP ++QA+ S PRE IR++LE G+ RP HNI+R+ R
Sbjct: 141 AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILV--------SVVGMAKVVVEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 335
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 213 bits (541), Expect = 5.960e-62 Identity = 108/201 (53.73%), Postives = 142/201 (70.65%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 603
QA+C+A+Y+I AWTMNCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPGT ++ SQD+ N+Y SQ RI I Q FG +V + WGILW+PL+++LG V+ ++ ++VRLHNF R + +VP + V P + F G +++T P + GRP Q RVSAPRE IR+ L+Q +GRP N+ RN
Sbjct: 152 QAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMV-KTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVPQSP-WRVDQPQEVRFAPDGSLEGTYYDTVP-TRGRPTTGQ-RVSAPREAIRQYLKQYSIGRPRWNLQRN 348
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.920e-60 Identity = 109/201 (54.23%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 603
Q +C+A+Y I AWTMNCPGS NDRTAFK S F +L+ LP G YIVGDAAYP SD VLVPYPGT ++ SQDA N+Y SQ RI+I Q FGI+V + WGILW+PL++RL V+ ++ S+VRLHNF R R+ +P + V P + F G +F+T P + GR R R SAPRE IR+ LEQ +GRP N+ RN
Sbjct: 218 QGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV-KTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPRSP-WRVTQPVEVRFRPDGSLEGTYFDTVP-TRGRQTRG-GRASAPREAIRQYLEQYSIGRPRWNLQRN 414
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 199 bits (506), Expect = 5.990e-56 Identity = 107/204 (52.45%), Postives = 137/204 (67.16%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 612
Q IC+A Y I WTMNCPGSQNDRTAFK SGF LL +P +IVGDAAYP S+ VLVP PGT ++ SQDA N+Y SQ RI+I Q FGILV + W ILWKPL +RL V ++ ++VRLHNF R R+ V A +V +P ++ F+ G +++T P + GRP++ A V PRE IR L+Q MGRP N++RN +R
Sbjct: 222 QGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV-KTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVP-TRGRPSKA-AEVCMPREIIRDYLDQKSMGRPRFNLNRNVNR 421
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 177 bits (449), Expect = 6.690e-48 Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 1
Query: 58 SQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 612
SQNDRTAF SGF KLL LP+G+++VG+AAY S+ V+VP+PGT Q T+GILV RRWGILW+P+E+R+ +V ++VRLHNFC DRKV+VPT G P + F+ G +D+FET P +GRP ++QA+ S PRE IR++LE G+ RP HNI+R+ R
Sbjct: 225 SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPXEQ----------------TYGILV-RRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 392
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5K6X9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X9_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.660e-32 Identity = 80/202 (39.60%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNI-GFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 603
QA+C YR A PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG ++ +D+ N++LSQ R+ I Q+FGILV WGILW PL ++LG L+ +L+ LHNF +D KV D R N + D + TEP+ S R AR + IR+ LE RP +N+ RN
Sbjct: 61 QAMCTVNYRFCAMPAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILV-STWGILWTPLRMQLGGRGDLITALLHLHNFLQDEKVAPIQLSEEDSRSGLNRPALCATQRTLPDGWGTEPAPS-RSGETPARAA-----IRKALELKKQRRPDYNLQRN 255
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.870e-32 Identity = 82/202 (40.59%), Postives = 112/202 (55.45%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNI-GFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 603
QA+C A YR A + PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG ++ +D+ N++LSQ R+ I Q+FGILV WGILW+PL ++LG A L+ +L LHNF +D KV D R N + D + TEP+ S R AR + IR+ LE RP +N+ RN
Sbjct: 252 QAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILV-STWGILWRPLRVQLGGRADLITALFHLHNFLQDEKVAPIQLSEEDSRSRLNRPALCATQHTLPDDWGTEPAPS-RSGETPARAA-----IRKALELKKQWRPDYNLQRN 446
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE) HSP 1 Score: 130 bits (326), Expect = 6.500e-30 Identity = 78/202 (38.61%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 1 QAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIGQTFGILVIRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNI-GFNQSGEFRNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 603
QA+C A YR A + PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG + +D+ N++LSQ R+ I Q+FGILV WGILW+PL ++ A L+ +L LHNF +D KV D R N + D ++TE + R AR + IR LE RP +N RN
Sbjct: 249 QAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILV-STWGILWRPLRVQFAGRADLITALFHLHNFLQDEKVSPIQVAEEDSRSGRNRPALCATQRTLPDGWQTEQPAPSRSGETPARAA-----IRTALELKKQWRPDYNRRRN 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig98.115.1 >prot_P-littoralis_Contig98.115.1 ID=prot_P-littoralis_Contig98.115.1|Name=mRNA_P-littoralis_Contig98.115.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp MNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTback to top mRNA from alignment at P-littoralis_Contig98:529666..531150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig98.115.1 ID=mRNA_P-littoralis_Contig98.115.1|Name=mRNA_P-littoralis_Contig98.115.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1485bp|location=Sequence derived from alignment at P-littoralis_Contig98:529666..531150- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig98:529666..531150- >mRNA_P-littoralis_Contig98.115.1 ID=mRNA_P-littoralis_Contig98.115.1|Name=mRNA_P-littoralis_Contig98.115.1|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig98:529666..531150- (Pylaiella littoralis U1_48)back to top |