mRNA_P-littoralis_Contig98.102.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 802 bits (2072), Expect = 3.540e-288 Identity = 401/461 (86.98%), Postives = 409/461 (88.72%), Query Frame = 2
Query: 611 QRHCHGRCLETFQDGDLV-----------------------------IETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDHSRGIQFGSRKKEIKMKRITGTQWQECESAAASKIWEELGRKEEP 1906
QRHCHG CLETFQDGDLV IE+DFAEKYTHQSFI+MMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLR DGS ATA++RKEGRTPRIHM TDGCGKQYKGRRNFRFLADSVRQIGFFID HFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSF R FFREKAGSEGEEGMRKYF KWSPYRMRRVHVEFIG KEI RPNSVLAG+EGT DMYHFAGAN PKWDGSTTTEGLEDD KLVRKSE RGSLSSQEKSRL+EV V GAVASRWKGKGAGLQ VSGEE VTCRKVKRTYRLRTRLASCFCSACQR EYEQCYV+K YPRLVPALQEGEVKETVIMDTGVAPVDED+SRGIQFGSRKKE KMKRITGTQWQECESAAASKIWEELG KEEP
Sbjct: 10 QRHCHGSCLETFQDGDLVXLRLHQQMGRSTPRNSPTRPCRRRDGDLVIESDFAEKYTHQSFINMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRADGSGATASSRKEGRTPRIHMLTDGCGKQYKGRRNFRFLADSVRQIGFFIDQHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFWRCFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGNKEISRPNSVLAGLEGTLDMYHFAGANNPKWDGSTTTEGLEDDRKLVRKSERRGSLSSQEKSRLREVNVSGAVASRWKGKGAGLQVLVSGEEGVTCRKVKRTYRLRTRLASCFCSACQRFEYEQCYVNKKYPRLVPALQEGEVKETVIMDTGVAPVDEDNSRGIQFGSRKKECKMKRITGTQWQECESAAASKIWEELGGKEEP 470
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 762 bits (1967), Expect = 1.210e-268 Identity = 372/396 (93.94%), Postives = 383/396 (96.72%), Query Frame = 2
Query: 650 DGDLVIETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDHSRGIQFGSRKKEIKMKRITGT 1837
DGDLVI TDFAEKYTHQSFISMMMP+YPQTTLMVAIVHFNPQTHVG GRVHVTETWIFASE+MAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRI+MFTDGCGK+YKGRRNFRFLADSVRQIGFFIDHHFA TSHFKGCHDGIGGVAKNAMKRRE F KRIMGADGVVSFLRSFFREKAGSEG EGMRKYF KWSPYRMRRVHVE IGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLE+DCKLVRK EGR SLSSQEKS+L EVKVLGAVASR KGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCE+EQCYVSKTYPRL+PAL+EGEVKETVIMDTGVAPVDED+SRGIQFGSRKKE K+KRITGT
Sbjct: 313 DGDLVIVTDFAEKYTHQSFISMMMPIYPQTTLMVAIVHFNPQTHVGDGRVHVTETWIFASENMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIYMFTDGCGKRYKGRRNFRFLADSVRQIGFFIDHHFAVTSHFKGCHDGIGGVAKNAMKRREIFDKRIMGADGVVSFLRSFFREKAGSEGGEGMRKYFAKWSPYRMRRVHVECIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLVRKREGRDSLSSQEKSKLVEVKVLGAVASRCKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEHEQCYVSKTYPRLLPALREGEVKETVIMDTGVAPVDEDNSRGIQFGSRKKECKIKRITGT 708
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5JQK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK2_9PHAE) HSP 1 Score: 691 bits (1784), Expect = 9.970e-241 Identity = 345/433 (79.68%), Postives = 371/433 (85.68%), Query Frame = 2
Query: 611 QRHCHGRCLETFQDGDLVIETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDHSRGIQFGSRKKEIKMKRITGTQWQECESAA-ASKIWEELGRKEEP 1906
QRHCH RCLETFQDGDLVIETDF+EKYTHQS+ISMMMPV+PQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMAD+YLRGDGSEATAAARKEGR+PRIH+F+DGCGKQYKGRRNFRFLADSVRQ+GFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREK GSEGEEG+ +MYHFAGANTPKWDGST+T+G EDDCKLV KSEG+G LSS EKSRL+EVKVLGAVASRWKG+GAGLQDP+SGEEDVTC+KVKRTY LRTRLASCFCSAC+R EYEQ YVSKTYPRLVPA+++G VKETVIMDTGVAPVDE+ S G++F KK KRITGTQW + +SA ASKIWEELGRKEEP
Sbjct: 314 QRHCHRRCLETFQDGDLVIETDFSEKYTHQSYISMMMPVHPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADHYLRGDGSEATAAARKEGRSPRIHIFSDGCGKQYKGRRNFRFLADSVRQLGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKEGSEGEEGV-------------------------------------CGEMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEGQGQLSSLEKSRLREVKVLGAVASRWKGQGAGLQDPISGEEDVTCKKVKRTYSLRTRLASCFCSACRRSEYEQYYVSKTYPRLVPAMEDGVVKETVIMDTGVAPVDENSSEGMKFPRYKKYCTKKRITGTQWLDGDSATTASKIWEELGRKEEP 709
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 651 bits (1679), Expect = 1.960e-222 Identity = 313/344 (90.99%), Postives = 325/344 (94.48%), Query Frame = 2
Query: 737 TTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDE 1768
TTLMVAIVHFNPQTH+GGGRVHVTETWIFASEDM H CDFHLHGLA+MADYYLRGDGSEATAAARKEGRTPR+HMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGV SFLRSFF EKAGSEGEEGMR+YF KWSPYRMRRVH EFIGKKEIYRPNS+L G+EGTR+MYHFAGANTPKWDGSTTTEGLE CKLV +SEG G S+ EKSRL EVKVLGAVASRWKG+GAGLQDPVSGEEDVTCRKVKRTY LRTRLASCFCSACQR EYEQCYVSKTYPRLVPA+Q+G VKETV MDTGVAPVDE
Sbjct: 548 TTLMVAIVHFNPQTHMGGGRVHVTETWIFASEDMGHGCDFHLHGLAKMADYYLRGDGSEATAAARKEGRTPRLHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVFSFLRSFFEEKAGSEGEEGMRRYFAKWSPYRMRRVHFEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLEGYCKLVLRSEGGGRSSNLEKSRLGEVKVLGAVASRWKGQGAGLQDPVSGEEDVTCRKVKRTYSLRTRLASCFCSACQRSEYEQCYVSKTYPRLVPAMQKGVVKETVTMDTGVAPVDE 891
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5L293_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L293_9PHAE) HSP 1 Score: 635 bits (1637), Expect = 1.800e-218 Identity = 311/383 (81.20%), Postives = 330/383 (86.16%), Query Frame = 2
Query: 611 QRHCHGRCLETFQDGDLVIETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAP 1759
QRHCHGRCLETFQDGDLVIETDFAEK HVTETWIF SEDMAHDCD HLHGLARMAD+YLRGDGSEATAAARKEGRTPRIH+FTDGCGKQYKGRR+FRFLADSVRQIG FIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMR+YF KWSPYRMRRVHVEFI KKEIYRPNS+L G+EGTR+MYHFAGANTPKWDGST+T+G EDDCKLV KSEG+G +SS EKSRL+EVKVLGAV SRWKG+GAGLQD +SGEEDVTC+KVKRTY LRTRLASCFCSAC+R EYEQ YVSKTYPRLVPA+++G VKETVIMDTGVAP
Sbjct: 370 QRHCHGRCLETFQDGDLVIETDFAEK------------------------------------AHVTETWIFVSEDMAHDCDLHLHGLARMADHYLRGDGSEATAAARKEGRTPRIHIFTDGCGKQYKGRRSFRFLADSVRQIGSFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEFISKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEGQGQMSSLEKSRLREVKVLGAVGSRWKGQGAGLQDLISGEEDVTCKKVKRTYSLRTRLASCFCSACRRSEYEQYYVSKTYPRLVPAMEDGVVKETVIMDTGVAP 716
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 623 bits (1606), Expect = 8.550e-216 Identity = 310/386 (80.31%), Postives = 330/386 (85.49%), Query Frame = 2
Query: 740 TLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDHSRGIQFGSRKKEIKMKRITGTQWQECESAAASKIWEELGRK 1897
TLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMAD+YLRGDGSEATAAAR++GRTPRIHM TDGCGKQYKGRRN RFLADSVRQIGFFI+HHFAATSHFKGCHDGIGGVAKNAMKRRE SEGEE RKYF KWSPYRMRRVHVEFIGKKEIYRPNS+L G+EGTR+MYH AGANTPK DGST+T+G EDDC LV KSEG+G LSS EKSRL++VKVLGA+ASRWK +GAGLQDP+S EEDVTCRKVKRTY LRTRLASCFCSAC R EYEQCYVSKTYPRLVPA+++ VKE VIMDTGVAPVDE+ S GI F KKE K KRITGTQWQE +SA ASKIWEELGRK
Sbjct: 176 TLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADHYLRGDGSEATAAAREKGRTPRIHMLTDGCGKQYKGRRNSRFLADSVRQIGFFINHHFAATSHFKGCHDGIGGVAKNAMKRRE-------------------------SEGEESTRKYFAKWSPYRMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHCAGANTPKRDGSTSTKGREDDCMLVLKSEGQGPLSSLEKSRLRKVKVLGALASRWKAQGAGLQDPISREEDVTCRKVKRTYSLRTRLASCFCSACLRSEYEQCYVSKTYPRLVPAMKDDVVKEPVIMDTGVAPVDENASEGINFPRYKKECKKKRITGTQWQEGDSATASKIWEELGRK 536
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5KDZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ7_9PHAE) HSP 1 Score: 535 bits (1379), Expect = 8.820e-180 Identity = 273/365 (74.79%), Postives = 293/365 (80.27%), Query Frame = 2
Query: 611 QRHCHGRCLETFQDGDLVIETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFF-REKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVP 1702
QRHCH RCLETFQD DLVIET +AEKY +QS+ISMMMPVYPQTTLMVAIV FNPQTHV G DFHLHGLARM D+YLRGDGSE TAAARKEGRTPRIH+FTDGCGKQ KGRRNFRFLADSVRQ+GFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVS LRSFF R +A S G +EIY PNS+L G+EGTR+MYHFAGANTPKWDGST+T+G EDDCKLV KSEG+G LSS EKSRL+EVKVLGAVASRWKG+GAGLQDP+SGEEDVTCRKVKRTY LRTRLASCFCSAC+R +YEQCYVSK P +P
Sbjct: 383 QRHCHKRCLETFQDSDLVIET-YAEKYPYQSYISMMMPVYPQTTLMVAIVRFNPQTHVDG--------------------DFHLHGLARMVDHYLRGDGSEPTAAARKEGRTPRIHIFTDGCGKQNKGRRNFRFLADSVRQLGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSLLRSFFGRRQAAS--------------------------GGREIYLPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEGQGQLSSLEKSRLREVKVLGAVASRWKGQGAGLQDPISGEEDVTCRKVKRTYSLRTRLASCFCSACRRSDYEQCYVSKRTPVSLP 700
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5JQG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG9_9PHAE) HSP 1 Score: 500 bits (1288), Expect = 1.420e-171 Identity = 247/304 (81.25%), Postives = 261/304 (85.86%), Query Frame = 2
Query: 611 QRHCHGRCLETFQDGDLVIETDFAEKYTHQSFISMMMPVYPQTTLMVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASR 1522
QRHCHGRCLETFQDGDLVIETDFAEKYTHQS+IS G R TWIF SEDMAHDCDFHLHGL RMAD+YLRGDGSEATAAARKEGRTPRIH+FTDGCGKQYKGRR+FRFLADSVRQIG FIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIM A+GVVSFLRSFFREKAGSEGEEGMR+YF KWSPYRMRRVHVE IGKKE+YRPNS+L G+EGTR+MYHFAGANTPKWDGST+T+G EDDCKLV KSEG+G LSS E SRL+EVKVLGAVASR
Sbjct: 56 QRHCHGRCLETFQDGDLVIETDFAEKYTHQSYIS-------------------------GAR---DGTWIFVSEDMAHDCDFHLHGLVRMADHYLRGDGSEATAAARKEGRTPRIHIFTDGCGKQYKGRRSFRFLADSVRQIGSFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMVANGVVSFLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEIIGKKEVYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGREDDCKLVLKSEGQGQLSSLETSRLREVKVLGAVASR 331
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5JFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY7_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 1.530e-161 Identity = 229/259 (88.42%), Postives = 240/259 (92.66%), Query Frame = 2
Query: 746 MVAIVHFNPQTHVGGGRVHVTETWIFASEDMAHDCDFHLHGLARMADYYLRGDGSEATAAARKEGRTPRIHMFTDGCGKQYKGRRNFRFLADSVRQIGFFIDHHFAATSHFKGCHDGIGGVAKNAMKRRERFGKRIMGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASR 1522
M AIVHFNPQTHVGGG VHVTETWIFASEDM HDCDFHLHGLARMAD+YLRGDGSE TAAARKEGRTPRIH+FTDGCGKQYKGRRN RFLADSVRQIGFFIDH FAATSHF G GIGGVAKNAMKRRERFGKRIMGADGVV FLRSFFREKAGSEGEEGMR+YF KWSPY MRRVHVEFIGKKEIYRPNS+L G+EGTR+MYHFAGANTP+WDGST+T+G EDDCKLV KSEG+G LSS E SRL+EVKVLGAVASR
Sbjct: 1 MAAIVHFNPQTHVGGGSVHVTETWIFASEDMTHDCDFHLHGLARMADHYLRGDGSETTAAARKEGRTPRIHIFTDGCGKQYKGRRNVRFLADSVRQIGFFIDHDFAATSHFNG--GGIGGVAKNAMKRRERFGKRIMGADGVVRFLRSFFREKAGSEGEEGMRRYFAKWSPYPMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPEWDGSTSTKGREDDCKLVLKSEGQGQLSSLETSRLREVKVLGAVASR 257
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 468 bits (1203), Expect = 8.490e-160 Identity = 235/251 (93.63%), Postives = 239/251 (95.22%), Query Frame = 2
Query: 1154 MGADGVVSFLRSFFREKAGSEGEEGMRKYFGKWSPYRMRRVHVEFIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLEDDCKLVRKSEGRGSLSSQEKSRLQEVKVLGAVASRWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDHSRGIQFGSRKKEIKMKRITGTQWQECESAAASKIWEELGRKEEP 1906
MGADGVVSFLRSFFREKAGSEGEEGMR YF KWSPYRMRRV VEFIGKKEIYR NSVLAGIEGTRDMYHFAGANTPKWDG TTTEG EDDCKLVRKSEGRGSLSSQEKSRL+E KVLGAVASRWKGKGA L PVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQ+GEVKETVIMDTGVAPVDED+SRGIQFGSR+KE KMKRITGT WQECESAAASKIWEELGRKEEP
Sbjct: 1 MGADGVVSFLRSFFREKAGSEGEEGMR-YFAKWSPYRMRRVQVEFIGKKEIYRLNSVLAGIEGTRDMYHFAGANTPKWDGFTTTEGREDDCKLVRKSEGRGSLSSQEKSRLREFKVLGAVASRWKGKGAELHHPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITGTHWQECESAAASKIWEELGRKEEP 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig98.102.1 >prot_P-littoralis_Contig98.102.1 ID=prot_P-littoralis_Contig98.102.1|Name=mRNA_P-littoralis_Contig98.102.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp MSSAQAGPAAAGLVAAVTKPGECERTVLLGKDKHVVKLSWRPVSERGVLVback to top mRNA from alignment at P-littoralis_Contig98:501578..503783+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig98.102.1 ID=mRNA_P-littoralis_Contig98.102.1|Name=mRNA_P-littoralis_Contig98.102.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2206bp|location=Sequence derived from alignment at P-littoralis_Contig98:501578..503783+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig98:501578..503783+ >mRNA_P-littoralis_Contig98.102.1 ID=mRNA_P-littoralis_Contig98.102.1|Name=mRNA_P-littoralis_Contig98.102.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig98:501578..503783+ (Pylaiella littoralis U1_48)back to top |