mRNA_P-littoralis_Contig978.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 173 bits (438), Expect = 2.250e-49 Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 1 VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQ 495
Y++P++ DG+ R FRM + EF +L DMLRP+LE N MG LR+G +PVE+Q+ LR+LAGG + ++ G+VIA+STAY R + AI +ELD WP+ + +R RSTNGV+ CVGAMDG+F+R+T+P R P SFYSGHKKGFGMNFQ
Sbjct: 55 TYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ 218
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.850e-49 Identity = 81/166 (48.80%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 1 VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQV 498
Y +P+L D + FRM +D+F VLVD LRP L+ N G LR+GA+PVEYQV TLRWLAGG +++ GHVIA+STAY + + A+ AC EL+ +WP+ + + + V+ KCVGAMDG+F+R+ +P +++ EPN +Y+GHKKGFGMNFQV
Sbjct: 59 TYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 223
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 164 bits (414), Expect = 7.930e-46 Identity = 76/144 (52.78%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 70 MVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQVM 501
+VLVD LRP L+ N MG LR+GA+PVE QV TLRWLAGG +++ GHVIA+STAY + + A+ AC EL+ +WP+ + + A E FR+RS+ V+ KCVGA DG+F+R+ +P +++ EPN +Y+GHKKGFGMNFQ +
Sbjct: 71 LVLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAV 213
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 163 bits (413), Expect = 1.310e-45 Identity = 80/165 (48.48%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 1 VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQ 495
Y P++ D + R FRM + +FM L D+LRP+L+ + MG LR+GA+PVE+Q+ TLR+LAGG + ++ +VIAKSTAY R + AI ++L+ +WP A E +R RSTNGV+ +CVGAMDG+F+R+ P + P SFYSGHKK FGMNFQ
Sbjct: 59 TYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAEL-YRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ 222
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.870e-42 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 1 VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKG 477
+ +P+L D + FRM +D+F VL+D LRP L N MG LR GA+PVEYQ+ TLRWLAGG +++ GHVIA+STAY + + A+ AC EL+ +WP+ + + V+ KCVGAMDG+F+R+ +P +++ EPN +Y+GH+KG
Sbjct: 59 THIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKG 202
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 146 bits (368), Expect = 3.710e-42 Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 118 MGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQV 498
MG LR+GA+PVE QV TLRWLAGG +++ GHVIA+STAY + + A+ AC EL+ +WP+ + + A E FR+RS+ V+ KCVGAMD +F+R+ +P +++ EPN +Y+GHKKGFGMNFQV
Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 102 bits (254), Expect = 5.470e-23 Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 1 VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIA 279
Y +P+L D + FRM +D+F VLVD LRP L+ N MG LR+GA+PVEYQV TLRWLAGG ++ GHVIA+STAY A I+A
Sbjct: 59 TYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHAVCDAQYRIMA 151
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.080e-20 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 118 MGRLRDGALPVEYQVGNTLRWLAGGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGA 390
MG LR+GA+PVEYQV TLRWLAGG +++ GHVIA+STAY + + A+ AC EL+ +WP+ + + A E FR+RS+ G + G+
Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAAGAAELFRNRSSYGCRPEVRGS 90
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5JYU2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU2_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 4.950e-20 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 217 HVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQV 498
HVIA+STAY + + A+ AC E++ +WP+ + + A E FR+RS+ V+ KCVGAMDG F+R+ +P +++ EPN +GHKKGFG NFQ
Sbjct: 4 HVIARSTAYHETSTVINALNACSEVNCKWPEGE-DAARAAELFRNRSSIDVVRKCVGAMDGFFVRMIKPSAKEVVEPNLCNNGHKKGFGTNFQA 96
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 6.680e-20 Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 187 GGEMHDIKQGHVIAKSTAYQTAARAMKAIIACKELDSRWPKNQTEFASIEEGFRDRSTNGVMAKCVGAMDGIFIRVTRPISRDTHEPNSFYSGHKKGFGMNFQVM 501
GG + ++ G V AKSTAY R + AI +E D WP+ +R RSTN V+ CVGAMDG+F+ + P R P FYSGHKKGFGMNFQ +
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAV 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig978.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig978.4.1 >prot_P-littoralis_Contig978.4.1 ID=prot_P-littoralis_Contig978.4.1|Name=mRNA_P-littoralis_Contig978.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=167bp VYSEPILADGSCRPSFRMGHDEFMVLVDMLRPELESNPDMGRLRDGALPVback to top mRNA from alignment at P-littoralis_Contig978:9770..10270+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig978.4.1 ID=mRNA_P-littoralis_Contig978.4.1|Name=mRNA_P-littoralis_Contig978.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig978:9770..10270+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig978:9770..10270+ >mRNA_P-littoralis_Contig978.4.1 ID=mRNA_P-littoralis_Contig978.4.1|Name=mRNA_P-littoralis_Contig978.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig978:9770..10270+ (Pylaiella littoralis U1_48)back to top |