mRNA_P-littoralis_Contig95.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI) HSP 1 Score: 311 bits (796), Expect = 2.050e-101 Identity = 161/208 (77.40%), Postives = 182/208 (87.50%), Query Frame = 1
Query: 94 MGLLDLMLSWVNRVVILASVVLLTLTTLTKQANIPLSQATLRLGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELGVERNSPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLNL 717
MG+LDLML W+ R IL SVVLLTLTTL + ++IPLSQATLR+ HLCSFS WFGTSVWVSFIAG+VLMRAV M+ FGLAQAKLFDAYFKFSLLCLAVAGFT AL+SSS + D + +G+ + A PFLVA+ CVVANLVFFSPQTTITMMER RVC+ELGV+R SPDPQVRKLSKRFGMFHGI NL+NLVALACG+VHLCALA +L+L
Sbjct: 1 MGVLDLMLPWITRAAILVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSARSDGD-DGSTVGATPFLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.320e-28 Identity = 70/173 (40.46%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 226 HLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELGV-----------ERNSPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQL 711
HL +FS+WFG SVWVSFIAG+V+ + + FG Q+KLF AYF FS + VA T++ALT S EE++ T + + L C + NL++F P TT M +R V + LG + + DPQ++ LSK FGM HG+ LLNL +L G A Q+
Sbjct: 50 HLLAFSSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSR-----EEASSTNNIPYSLIAILACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFGCAWFSKCADQM 217
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.360e-26 Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 214 LRLGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELGV-----------ERNSPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLNL 717
L L HL +FS+WFG SVWVSF AG+V+ + + FG Q+KLF AYF FS + +A T+ L SS+ + + +V L C++ NL +F P TT M +R V + LG + + DPQ++ LSK FGM HG+ LLNL AL G V L A ++ L
Sbjct: 47 LMLIHLLAFSSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIPYSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFGCVWLSKCAERMVL 225
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.490e-25 Identity = 69/178 (38.76%), Postives = 97/178 (54.49%), Query Frame = 1
Query: 214 LRLGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELGVERN-----------SPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLN 714
L L HL +FS+WFG SVWVSF+AG+V+ R + FG Q++LF YF+FS L +AVA F+A A+ A+ + + V+ NL+F P+TT M +R V + LG + DP++R LSK+FGM HG+ +L+NL AL G V L A Q+
Sbjct: 51 LLLVHLLAFSSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGAV---------------GWNAYGLVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFGCVWLNFCAKQMG 213
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.930e-24 Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 220 LGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWP---FLVALVCVVANLVFFSPQTTITMMERRRVCRELG-------VERNSP----DPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLN 714
L HL +FS+WFG SVWVSF++G+V+ R + FG Q++LF AYF++S + +AVA TA AL W LV + V+ NL+F P+TT M +R V + LG ++ + P DP++R LSK+FGM HGI +L NL AL G V L A ++
Sbjct: 49 LVHLLAFSSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGAL------------------GWRTNVLLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFGCVWLNFCAAKIG 209
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A7S1BIS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIS9_9STRA) HSP 1 Score: 103 bits (258), Expect = 6.180e-22 Identity = 74/207 (35.75%), Postives = 108/207 (52.17%), Query Frame = 1
Query: 139 ILASVVLLTLTTLTKQANIPLSQATLRLGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVAGFTATALTSSSFSSVDEESNGTAIKAWP--FLVALV-CVVANLVFFSPQTTITMMERRRVCRELG-------VERNSP----DPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLNL 717
+L S+ +L L T + P S+ L L HL + ++WFG SVWVS +AG+V RA+ FG A+LF YF FS + +++A A L WP +L A++ V ANL++ P+TT M R V R LG ++ + P DP++R L+K+FGM HGI LLNL+A+ G V LA ++ +
Sbjct: 32 LLLSLFILILATSLAPPSDPRSRKALLLLHLLACASWFGCSVWVSCVAGLVTFRALPRHVFGRLMARLFPVYFNFSAVTVSLAAAAARGL------------------GWPIAWLAAILGTVAANLLYLEPETTRVMFLRHVVERRLGTGHEVGQLKPSDPAKANDPELRALTKKFGMLHGISTLLNLMAMGFGCVWFSILAQKITV 220
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A0G4GGW2_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGW2_9ALVE) HSP 1 Score: 102 bits (254), Expect = 6.070e-21 Identity = 65/175 (37.14%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 226 HLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAV--AGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELGVERN-----------SPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQL 711
HL F++WFG SVWVSF+AG+V+ ++ FG QAKLF YF+FS+LC++V A A S + E I W L+ NL++F P TT M R V R LG + DP++ LS RFG HG LNL+ L G H+C + +L
Sbjct: 99 HLFFFASWFGCSVWVSFVAGLVMFYSLPRHVFGQLQAKLFPRYFQFSVLCISVCLALEVCAAKFRGSSKCMPREQQMNLIAVWGILLL------NLLYFEPVTTKVMFLRHAVERRLGTGHEVGQLRPWDPVKAKDPELVSLSARFGKLHGCSTSLNLLGLGLGCWHICWIGARL 267
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A8J4RRE6_9ROSI (DUF4149 domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RRE6_9ROSI) HSP 1 Score: 100 bits (249), Expect = 9.320e-21 Identity = 63/179 (35.20%), Postives = 101/179 (56.42%), Query Frame = 1
Query: 214 LRLGHLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVA-GFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCR------ELGVERN----SPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLNL 717
L+L HL +S FGT++WV+FIAG+++ + + FG Q+K+F AYF +C AV+ G A S S+ D+ G + A+ F +A NL+ FSP T M +R V R E+G +N +P+++ ++K+FGM HG+ +L N+++ ++H LAG+LNL
Sbjct: 42 LKLAHLLCYSTAFGTALWVTFIAGIIMFKNLPRHQFGSLQSKMFPAYFSMVGICCAVSVGSFAYLHPWKSSSTADKYQLGFLLSAFAFNLA------NLLVFSPMTIEMMKQRHEVERGSNIGDEVGWSKNVEVAKVNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKLNL 214
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A7S0G774_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G774_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.170e-19 Identity = 64/180 (35.56%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 226 HLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSL----LCLA---VAGFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCREL--GVE---------RNSPDPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQL 711
HL SF++++G +VWV+FI+G+V+ + + +FG Q+KLF YF+F + +CLA +A A+ L +S+ + G + L+ ++ NLV P+TT M +R V R L G E ++ DPQ+++LSK+FGM HGI LNLV G+ H LA +L
Sbjct: 49 HLISFASFYGCTVWVTFISGIVMFKNMKRHDFGRLQSKLFPRYFQFCIGTVAVCLALDWIARRNASTLAASTMPNEQMRYFG---------IMLLVLILNLVVLEPKTTEVMYKRHVVERRLKTGHEVGQLKPSDPNSANDPQLKELSKQFGMLHGISASLNLVVFGLGTWHCFWLASKL 219
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Match: A0A8J1W0M4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W0M4_9DINO) HSP 1 Score: 95.1 bits (235), Expect = 1.810e-18 Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 226 HLCSFSAWFGTSVWVSFIAGVVLMRAVNMDNFGLAQAKLFDAYFKFSLLCLAVA---------GFTATALTSSSFSSVDEESNGTAIKAWPFLVALVCVVANLVFFSPQTTITMMERRRVCRELG-------VERNSP----DPQVRKLSKRFGMFHGICNLLNLVALACGSVHLCALAGQLN 714
H+ F++WFG S+WVSF+AG+V+ + FG QAKLF YF+FS++ ++ A TAL + +++ N AI + ++ NL++F P+TT M ER +V +LG ++ + P DP++ LSKRFG HGI LNL+AL G H + Q++
Sbjct: 80 HVFCFASWFGCSMWVSFVAGLVMFNNLPRHVFGRLQAKLFPRYFQFSVIFVSCALLPHLVPGSVLERTALAKTVALPQNQQFNLAAI--------IGILLLNLLYFEPRTTAVMFERHKVEVKLGTGHEIGQLKPSDPAKANDPELVALSKRFGKLHGISTSLNLIALCLGVWHAVWIGSQVS 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig95.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig95.9.1 >prot_P-littoralis_Contig95.9.1 ID=prot_P-littoralis_Contig95.9.1|Name=mRNA_P-littoralis_Contig95.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=209bp MGLLDLMLSWVNRVVILASVVLLTLTTLTKQANIPLSQATLRLGHLCSFSback to top mRNA from alignment at P-littoralis_Contig95:34916..37787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig95.9.1 ID=mRNA_P-littoralis_Contig95.9.1|Name=mRNA_P-littoralis_Contig95.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2872bp|location=Sequence derived from alignment at P-littoralis_Contig95:34916..37787- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig95:34916..37787- >mRNA_P-littoralis_Contig95.9.1 ID=mRNA_P-littoralis_Contig95.9.1|Name=mRNA_P-littoralis_Contig95.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=627bp|location=Sequence derived from alignment at P-littoralis_Contig95:34916..37787- (Pylaiella littoralis U1_48)back to top |