mRNA_P-littoralis_Contig91.116.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JFH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH8_9PHAE) HSP 1 Score: 128 bits (322), Expect = 3.890e-34 Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ F YQDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ D+ DI KAQ LRRK
Sbjct: 152 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRFAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVASDQADIDKAQALRRK 239
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 127 bits (319), Expect = 6.740e-33 Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ F YQDECIYR+ND +R +WVPPN H LKKKGDG GIM SGTIVDN GF+ GD+ DI KAQ RRK
Sbjct: 177 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDDQRFAWVPPNYHALKKKGDGQGIMTSGTIVDNVGFVAGDQADIDKAQAFRRK 264
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5KPN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.450e-32 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ L +RVTSK+ Y +G++ F YQDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ G + DI +AQ LRRK
Sbjct: 146 ELPQHLCERVTSKKTYSNGRRAIFCYQDECIYRANDGQRSAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVAGGQADIDEAQALRRK 233
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.270e-32 Identity = 60/88 (68.18%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ F YQDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ GD+ DI +A LRRK
Sbjct: 514 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRYAWVPPNFHALKKKGDGQGIMISGTIVDNVGFVAGDQADIDEAHALRRK 601
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JC29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC29_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.460e-31 Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ YP+GK+ F +QDEC+YR ND +R SWVPPN +GLKKKG+G GIMISGTIVDN GF+ G++ DI KAQELRR
Sbjct: 167 LRKRVTSKKAYPEGKRAIFCFQDECMYRGNDDQRCSWVPPNFNGLKKKGEGAGIMISGTIVDNVGFVAGNQSDIDKAQELRR 248
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5KNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH0_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.060e-30 Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
E P LR+RVTSK+ Y DG++ F YQDEC YR+ND +R +WVPPN + LKK+GDG GIMISGTIVDN GF+ GD+ DI KAQ LRRK
Sbjct: 205 EFPLHLRERVTSKKTYSDGRRAIFCYQDECTYRANDGQRFAWVPPNYYALKKQGDGQGIMISGTIVDNVGFVAGDQADIDKAQTLRRK 292
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 114 bits (284), Expect = 4.820e-28 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ Y DG++ F YQDECIYR++D E K+W PP +HGLKKKG+G GIMISGTIV + GF+ G +DDI KAQ+LRR
Sbjct: 252 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRR 333
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.570e-27 Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ Y DG++ F YQDECIYR++D E K+W PP +HGLKKKG+G GIMISGTIV + GF+ G +DDI KAQ+LRR
Sbjct: 268 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRR 349
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JJP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP5_9PHAE) HSP 1 Score: 103 bits (256), Expect = 6.050e-24 Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKK 243
EL LR RVTSK+ Y DG+K F +QDECIYR+ND ER +W PP HGL+KKG+G GIMISGTIV + GF+ G +++I K
Sbjct: 117 ELHPNLRARVTSKKEYADGRKAIFCHQDECIYRANDGERMAWWPPTTHGLRKKGEGQGIMISGTIVGDVGFVEGTQEEIDK 197
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.200e-22 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIG 222
ELP+ LR+RVTSK+ Y DG++ Y DECIYR+ND +R +WVPPN H K+KGD GIMISGTIVDN G G
Sbjct: 378 ELPQHLRERVTSKKTYSDGRRAILCYHDECIYRANDGQRFAWVPPNYHAFKRKGDSQGIMISGTIVDNVGVEYG 451 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig91.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig91.116.1 >prot_P-littoralis_Contig91.116.1 ID=prot_P-littoralis_Contig91.116.1|Name=mRNA_P-littoralis_Contig91.116.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp ELPKTLRDRVTSKRLYPDGKKVKFYYQDECIYRSNDSERKSWVPPNVHGLback to top mRNA from alignment at P-littoralis_Contig91:366456..366719+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig91.116.1 ID=mRNA_P-littoralis_Contig91.116.1|Name=mRNA_P-littoralis_Contig91.116.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig91:366456..366719+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig91:366456..366719+ >mRNA_P-littoralis_Contig91.116.1 ID=mRNA_P-littoralis_Contig91.116.1|Name=mRNA_P-littoralis_Contig91.116.1|organism=Pylaiella littoralis U1_48|type=CDS|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig91:366456..366719+ (Pylaiella littoralis U1_48)back to top |