mRNA_P-littoralis_Contig902.10.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: D7FLW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW5_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 4.170e-146 Identity = 223/291 (76.63%), Postives = 244/291 (83.85%), Query Frame = 3
Query: 435 GYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
GYKV+ +GRC+G+EALPPLKNRYYALRHGQSVANMEGIISS+P+VGSVKHGLTSNGRSQAR+AATALIE VGR+RLDSLVFVSS+FLRARQTAEECRAALQNI+SFE AM D+ ADG + G G SLDEG++GGYDVSPP+VIR+ELRER FGEL+GTILVNYNKVWPEDLKDG QEGYGVESVCDVASRVGRLVR+LE +YEDADIV SSHADTLQIAQC+IAGADERLFSQYRFKNGEVRR L+DP SLPPPAPLSFQ
Sbjct: 89 GYKVEESGRCTGLEALPPLKNRYYALRHGQSVANMEGIISSNPKVGSVKHGLTSNGRSQARVAATALIEAVGRDRLDSLVFVSSEFLRARQTAEECRAALQNILSFERAAMAMGGGK---------------------GDDAAADGTGAEGGDGEFSLDEGSMGGYDVSPPLVIRQELRERAFGELDGTILVNYNKVWPEDLKDGMQEGYGVESVCDVASRVGRLVRALERDYEDADIVLSSHADTLQIAQCYIAGADERLFSQYRFKNGEVRRLLRDPDSLPPPAPLSFQ 358
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A836CKV0_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV0_9STRA) HSP 1 Score: 295 bits (754), Expect = 7.070e-92 Identity = 161/294 (54.76%), Postives = 191/294 (64.97%), Query Frame = 3
Query: 426 GAVGYKV-DRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSF 1304
GA GY + D GR S V LP L+NRY+ALRHGQSVANMEGIISSDP VG+VKHGLT++G+ QAR+AAT LIE VGR LD L+F+SSDF RAR+TAEECRAA+ I FE + ++ +G PP VIR+ELRER+FGEL+GT+L+NYNKVWP DL D GYGVESV DV +R+ RL SLE +Y +V +SHADTLQI QC++AGADERLFSQYRFKNGEVR LQ+ SLPPP PLS+
Sbjct: 14 GAAGYLLKDTIGR-STVPRLPLLQNRYFALRHGQSVANMEGIISSDPAVGTVKHGLTTSGKVQARVAATQLIEAVGREALDDLIFISSDFTRARETAEECRAAVVRITEFEREERAVSTLLLQ------------------------------------------VIGETFECPPAVIRQELRERYFGELDGTVLLNYNKVWPADLIDSRHAGYGVESVQDVCARMQRLFLSLEEQYAGKCMVLTSHADTLQIMQCYVAGADERLFSQYRFKNGEVRALLQEQTSLPPPKPLSY 264
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A6V1VLS3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VLS3_HETAK) HSP 1 Score: 242 bits (618), Expect = 3.520e-71 Identity = 129/281 (45.91%), Postives = 173/281 (61.57%), Query Frame = 3
Query: 471 VEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRN--RLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
V LPPL+N YYALRHGQS+AN+EGIISSD VG+ +HGLTS+GR+QAR AA L+ ++ + + LVF+SS+F RAR+TAEE A+ II +E + + E P++ V + + P+ I LRER+FGEL+GT+L NYNKVWPED+++ GYGVESV DV R+ + ++ +Y++ IV +SHADTLQI QC++AG D RLFSQYRFKN EVR+ QDP+ +P P PLS+Q
Sbjct: 73 VPILPPLRNSYYALRHGQSLANLEGIISSDVLVGTTRHGLTSSGRAQARKAAVPLLSMIAGDGFTFEDLVFISSNFTRARETAEETIRAIDRIIEYEEEPVAT---------------------------ELPSE----------------NVPSHQI--PLAIFPGLRERYFGELDGTVLPNYNKVWPEDVQNAQHSGYGVESVNDVCRRIEETILEIDQQYQNKAIVLTSHADTLQITQCYLAGVDPRLFSQYRFKNAEVRKLAQDPSCIPSPMPLSYQ 308
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A8J5XRL8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRL8_DIALT) HSP 1 Score: 235 bits (599), Expect = 1.340e-68 Identity = 148/331 (44.71%), Postives = 186/331 (56.19%), Query Frame = 3
Query: 318 GWRAPLAHAFLSSSRTSSRNLATAISLTSTDKEAEGGAVGYKVDRAGRCS-GVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
G+ PLA A +SS ++ + T +L ST+ A+ + + G+C E LPPLKN Y+ LRHGQS AN+EGIISSDP VG++KHGLT +GR QAR AAT LI++VGR RLD L F SSDF RA QTAEE +A++N+I +E+ P+ E ++ ++ G +P LRERWFG L+G L NY VWP DL + VESV VA R+ L+ +E E IV +SHADTLQIAQ IAG D R FSQYRF NGEVR QDPASLP P PL++Q
Sbjct: 15 GFLVPLASA-MSSGASALAHAGTGYTLISTELLAQ-------LMQVGQCPCSTEPLPPLKNCYFGLRHGQSEANVEGIISSDPAVGTIKHGLTLDGRLQARRAATRLIDMVGRERLDRLFFYSSDFTRAWQTAEEALSAVKNVIEYESSLFY----------------------------------PDRVE----LARVPDSLAGVARTPL------LRERWFGSLDGKALRNYQHVWPRDLVSAEHCHFDVESVSAVAQRIRTLILEIEAERTGCSIVLTSHADTLQIAQVFIAGEDPRSFSQYRFANGEVRALRQDPASLPRPVPLTYQ 293
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0L2B8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2B8_9EUKA) HSP 1 Score: 227 bits (579), Expect = 1.870e-65 Identity = 132/277 (47.65%), Postives = 157/277 (56.68%), Query Frame = 3
Query: 480 LPP-LKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
LPP L+NRY+ALRHGQS AN+EGIISSDP VG+V HGLT G+ QAR AAT LI+ VGR +LD L F SSDF RA QTA+E A + N++ +EN AM + S +L E G +P LRER+FGELE L+NY KVWP DL A + VESV VA RV + E + A IV SHADTLQI+QC IAGAD R F QYRF+NGEVR Q +LP P PLS++
Sbjct: 79 LPPRLRNRYFALRHGQSEANVEGIISSDPSVGTVIHGLTPMGKLQARRAATKLIDAVGREQLDRLYFYSSDFTRAAQTADEALAGVMNVLQYENAAMDEDSS---------------------------------------AALPEALTAGVRRTPL------LRERYFGELEAQALINYQKVWPRDLVSAAHTSFSVESVEAVAERVRSFILQAEEAHSHATIVLVSHADTLQISQCFIAGADCRTFCQYRFQNGEVRELAQGEDTLPAPVPLSYE 310
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S4C074_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C074_CHRCT) HSP 1 Score: 225 bits (574), Expect = 9.120e-65 Identity = 126/274 (45.99%), Postives = 157/274 (57.30%), Query Frame = 3
Query: 486 PLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSFQ 1307
PL+NRY+ LRHGQS AN+ GIISSDP +G+ HGLT+ GR QAR AAT L+++VGR L S F SSDF RA QTAEE A + N++ +EN TD S E PA L G V+P + RER+FG+ +GT+L NY +VWP DL +GVESV DV R+ + +E +++ IV SHADTLQIAQC++AGAD R F QYRFKNGEVR Q +LP P PLS+Q
Sbjct: 77 PLRNRYFGLRHGQSEANVAGIISSDPSIGTTMHGLTALGRLQARRAATTLVDLVGRENLGSTHFYSSDFTRALQTAEEALAGVINLLEYENSVETDDSL------------------------ELPA-------------LPSSLTDGVKVTPLV------RERYFGDFDGTVLSNYQQVWPRDLVSAQHTTFGVESVQDVTRRLRECILQMEEQHDGCTIVLVSHADTLQIAQCYLAGADCRTFCQYRFKNGEVRLLAQGEDTLPAPVPLSYQ 307
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0DJZ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJZ6_9EUKA) HSP 1 Score: 223 bits (567), Expect = 6.270e-63 Identity = 124/277 (44.77%), Postives = 161/277 (58.12%), Query Frame = 3
Query: 471 VEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVS-PPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
V LP LKNRY+ALRHG+S+AN+EGIISS+ + G+ HGLT+ G+ QAR +AT L+E +GR+ L+ LV SS+F RAR+TA EC +A+Q I+ FE++ VGG+ PP+ I L ER FGEL+ T + NYN VWP DL D +GVESV V RV ++ +E ++ + +I+ +SHADTLQI QC+IA D RLFSQYRFKN E+RR QDP SLP PAPL
Sbjct: 140 VPVLPKLKNRYFALRHGESLANLEGIISSNYDTGTTIHGLTTMGKMQARQSATVLLECIGRDGLEHLVVYSSNFTRARETAFECVSAMQRIVDFESE-----------------------------------------------------VGGWSGRIPPLEIEDRLIERGFGELDTTEVTNYNYVWPLDLYDAKHSAFGVESVESVCRRVRSMIVDMEAKHTNQNILLTSHADTLQIMQCYIAQIDPRLFSQYRFKNAEIRRLSQDPNSLPNPAPL 363
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S0Z5T0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z5T0_9CRYP) HSP 1 Score: 212 bits (540), Expect = 1.530e-60 Identity = 118/273 (43.22%), Postives = 159/273 (58.24%), Query Frame = 3
Query: 486 PLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPLSF 1304
PL+NRY+ALRHGQS AN++ IISS P G+ HGLT GR QA+ +A L+E +G ++ ++F SS+F RARQTAEE AAL+ ++ +E G + D+ D S ++ + LRERWFG+L+ TI+ NYNKVWP DLKD +GVESV +R+ ++ LEGE+E D+V +SHADTLQI Q +AG D R FSQ+RFKNGEVRR LQD +++P P PL++
Sbjct: 32 PLRNRYFALRHGQSEANVDNIISSLPARGTTIHGLTGLGRLQAQQSAPRLLEAIGDGHVEKVLFCSSNFTRARQTAEEAAAALKELL---------------------------------------------RETRGSATADK-----LDTSVTVI--EPLRERWFGDLDNTIITNYNKVWPADLKDAQCVQHGVESVDACCARLSAVILQLEGEHEGRDLVLTSHADTLQILQSWLAGEDPRRFSQFRFKNGEVRRLLQDASAMPDPVPLTY 252
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S4DTI5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DTI5_9EUKA) HSP 1 Score: 213 bits (542), Expect = 1.400e-58 Identity = 124/293 (42.32%), Postives = 160/293 (54.61%), Query Frame = 3
Query: 423 GGAVGYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNRLDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIV-IRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
G A G + A ++ LP L+NRY+ALRHG+S AN+ GIISS+ E GS HGLT G +QAR AAT L+E +GR+ + L+ SS+F RARQTA EC A++NI+ +E +L GT S ++ I L ER FGEL+ T + NYN VWP DL D +GVE+V V +RV L+ LE ++ I+ +SHADTLQI QC++AG D RLFSQYRF+N EVR +Q SLPPPAPL
Sbjct: 117 GEAWGLVPNNANGSIDIQVLPRLRNRYFALRHGESEANLAGIISSNYETGSTIHGLTPKGVTQAREAATFLLETIGRDNVQDLIVYSSNFTRARQTASECMGAVENILEYET------------------------------------------------ALTRGTDKALPSSSSVIHIDNRLIERGFGELDTTKVTNYNYVWPLDLYDAHHTAFGVEAVNSVVARVKELILELEQRHDRKLILLTSHADTLQIMQCYMAGVDPRLFSQYRFRNAEVRPLVQQTGSLPPPAPL 361
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Match: A0A7S2V2Q2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q2_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.120e-55 Identity = 118/290 (40.69%), Postives = 151/290 (52.07%), Query Frame = 3
Query: 432 VGYKVDRAGRCSGVEALPPLKNRYYALRHGQSVANMEGIISSDPEVGSVKHGLTSNGRSQARIAATALIEVVGRNR-LDSLVFVSSDFLRARQTAEECRAALQNIISFENQAMTDASXXXXXXXXXXXXXXXXXXXXXXXSDETPADGPETQEGGGGVSLDEGTVGGYDVSPPIVIRKELRERWFGELEGTILVNYNKVWPEDLKDGAQEGYGVESVCDVASRVGRLVRSLEGEYEDADIVFSSHADTLQIAQCHIAGADERLFSQYRFKNGEVRRCLQDPASLPPPAPL 1298
+ + +G C + LPPL+N+YYA RHGQS AN+ GIISS P G+ HGLT G+ QAR AA A+++++G + L+ L+ SSDF RAR+TA E E MTD S P + I K LRER+FGEL+G L+ YN VWP DL+D +GVESV V RV + LE +E+ I+ +SHADTLQI Q ++A AD R FS YRFKNGEVR +Q P+SLP P PL
Sbjct: 44 ISMSLSLSGECL-LPKLPPLRNKYYAFRHGQSTANVRGIISSSPAKGTTSHGLTETGKRQAREAAPAIVDMIGGSESLNDLIVYSSDFTRARETALEAVD--------EMWRMTDVS---------------------------------------------------SPKPVVNIEKGLRERFFGELDGKDLITYNDVWPLDLEDAHHNTFGVESVNTVVFRVRETIMELEERHENKSIILTSHADTLQILQLYVANADVRSFSSYRFKNGEVRALIQKPSSLPTPVPL 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig902.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig902.10.3 >prot_P-littoralis_Contig902.10.3 ID=prot_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=411bp MTVLSLCVFSLLCSRLHPASAWTTRPSLQHARHVSYTRSLDSTSSSSSSSback to top mRNA from alignment at P-littoralis_Contig902:49053..53701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig902.10.3 ID=mRNA_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4649bp|location=Sequence derived from alignment at P-littoralis_Contig902:49053..53701+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig902:49053..53701+ >mRNA_P-littoralis_Contig902.10.3 ID=mRNA_P-littoralis_Contig902.10.3|Name=mRNA_P-littoralis_Contig902.10.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1233bp|location=Sequence derived from alignment at P-littoralis_Contig902:49053..53701+ (Pylaiella littoralis U1_48)back to top |