mRNA_P-littoralis_Contig901.4.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 272 bits (696), Expect = 3.780e-86 Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 2
Query: 359 EGFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGFT STNDKTIICCDEAVDRI TDKQ AEKPFTVHKK GTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM
Sbjct: 248 EGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 245 bits (626), Expect = 3.180e-76 Identity = 140/258 (54.26%), Postives = 164/258 (63.57%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLA-GRGVH*VHQRQDHHLL**SGGQNLDR--QAVRRKTIH--------SPQKGWYYGNPEGVLPHRRQWLPQVADAH*TLEVPVERG*LAVLEEAGERAQGCGVFFRHPEDALQNPEARHDLPEAGAPRLRLLHMLYPAQHA 741
VLA LTILGRGN F SIY +SWMS TVQ +FH FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN RSYTGKEG PT+GYQVTVNHAGR A G D ++ R + KT + KG Y G H+ Q L AH +VP ER + EEAGERA+G G+ RHPE LQ+PEARH +P AGA R R+LH+L+ AQHA
Sbjct: 126 VLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGF--TGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY--HKWQIL---MGAH---QVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHA 373
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 223 bits (568), Expect = 1.800e-68 Identity = 106/134 (79.10%), Postives = 115/134 (85.82%), Query Frame = 2
Query: 359 EGFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGFT STNDKTI+C D AVD+I TDKQ EK F ++ + GTT TLKGCY + DNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM
Sbjct: 124 EGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGM 257
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 218 bits (554), Expect = 7.710e-67 Identity = 103/134 (76.87%), Postives = 114/134 (85.07%), Query Frame = 2
Query: 359 EGFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGFT STNDKT +C D AV++I TDKQ EK F V+ + GTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT DGM
Sbjct: 79 EGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGM 212
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 6.510e-63 Identity = 98/134 (73.13%), Postives = 112/134 (83.58%), Query Frame = 2
Query: 359 EGFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGFT STNDKT +C D V++I TD Q EK F V+ + GTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK FRI K+AM Y +QER+D VFFTCCILHNMLHT DGM
Sbjct: 219 EGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGM 352
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 211 bits (536), Expect = 2.220e-62 Identity = 107/162 (66.05%), Postives = 116/162 (71.60%), Query Frame = 2
Query: 359 EGFTRSTNDKTIICCDEAVDRIWTDKQSA----------------------------EKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGFT STNDKTI+C D AV++IWTDK EK F V+ + GTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT DGM
Sbjct: 206 EGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGM 367
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 199 bits (505), Expect = 4.280e-60 Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 1
Query: 1 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRV 348
VLA LTILGRGN F SIY +SWMS TVQ +FH+FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN RSYTGKEG PTVGYQVTVNHAGR
Sbjct: 126 VLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRA 241
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 4.460e-54 Identity = 89/132 (67.42%), Postives = 103/132 (78.03%), Query Frame = 2
Query: 362 GFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDG 757
GFT STNDK+II D AV +I D +EK FTV++ GT LKGCYL+VDNGYHKW LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K FRILKL++ Y KQE +D VFFTCCILHNMLH++D
Sbjct: 37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDN 168
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 187 bits (475), Expect = 4.050e-53 Identity = 94/135 (69.63%), Postives = 107/135 (79.26%), Query Frame = 2
Query: 359 EGF-TRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 760
EGF T + TI+C D AV++I TDKQ EK F V+ + GTT TLKG YL+VDNGYHKW++LIEPSKYPLSE DLLFSKRL+SVR+D GILK RFRILKLAM YQ QER+D VFFTCCI+HNMLHT DGM
Sbjct: 254 EGFPTIAYQVVTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGM 388
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.810e-52 Identity = 90/132 (68.18%), Postives = 104/132 (78.79%), Query Frame = 2
Query: 362 GFTRSTNDKTIICCDEAVDRIWTDKQSAEKPFTVHKKGGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDG 757
GFT STNDK+II D AV +I D +EK FTV++ GT LKGCYL+VDNGYHKW LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH++D
Sbjct: 278 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDN 409 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig901.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig901.4.2 >prot_P-littoralis_Contig901.4.2 ID=prot_P-littoralis_Contig901.4.2|Name=mRNA_P-littoralis_Contig901.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=102bp MSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGback to top mRNA from alignment at P-littoralis_Contig901:9396..10356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig901.4.2 ID=mRNA_P-littoralis_Contig901.4.2|Name=mRNA_P-littoralis_Contig901.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=961bp|location=Sequence derived from alignment at P-littoralis_Contig901:9396..10356- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig901:9396..10356- >mRNA_P-littoralis_Contig901.4.2 ID=mRNA_P-littoralis_Contig901.4.2|Name=mRNA_P-littoralis_Contig901.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=306bp|location=Sequence derived from alignment at P-littoralis_Contig901:9396..10356- (Pylaiella littoralis U1_48)back to top |