mRNA_P-littoralis_Contig9.95.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig9.95.2
Unique NamemRNA_P-littoralis_Contig9.95.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 3.660e-117
Identity = 174/196 (88.78%), Postives = 187/196 (95.41%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
            MNTL+GVKGRDFVLLGGDSAFFRSVVIMDTEY KVVELS+N+LVA SGDQGDVEMFVEWLKRN +LM+LESSRPVG RTLAHFARRNLA+KLR QGAGQAVT L+GGW+EVA QP+LFWLDALGALQ VPFGAHGLASRFALSLLDNGFREGMSLDEARHLME+CFRQLERRYLVSSVGFS+KVVD+DGCRDV C+
Sbjct:    1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 196          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 9.230e-107
Identity = 176/198 (88.89%), Postives = 189/198 (95.45%), Query Frame = 3
Query:   57 TEMNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
            ++MNTL+GVKGRDFVLLGGDSAFFRSVVIMDTEY KVVELS+N+LVAASGDQGDVEMFVEWLKRN QLM+LESSRPVG RTLAHFARRNLA+KLR QGAGQAVT LLGGW+EVA QP+LFWLDALGALQ V FGAHGLASRFALSLLDNGFREGMSLDEARHLME+CFRQLERRYLVSSVGFS+KVVD+DGCRDV C+
Sbjct:   26 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 223          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A1X2G7A8_9FUNG (Proteasome subunit beta n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G7A8_9FUNG)

HSP 1 Score: 155 bits (392), Expect = 3.580e-41
Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
            M  L G+ G+DF LL  D+   RS+V+M     K  +LS + ++  SG+ GD   F E+++RN +L  +++   +  + +A F RR +A+ LR++    AV ++LGG+DE  G+P+LFW+D LGA+ S+PF A G  + F  SL+D  +REGM ++EA+ L++ C  +L+ R++V+   F +K+VD+DG  ++
Sbjct:    1 MECLFGITGKDFALLAADTISARSIVVMKGTEDKSRQLSPHSVLLYSGEPGDTVNFAEYIQRNIRLYSIQNGIELSPKAIATFTRREIADSLRSRHP-YAVNMILGGFDEKTGKPELFWIDYLGAMASLPFAAQGYGAYFCTSLMDRHYREGMDVEEAKKLLQQCINELKTRFIVNMPKFVVKLVDKDGVHEI 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: UPI00026585B1 (proteasome subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1)

HSP 1 Score: 152 bits (385), Expect = 4.300e-40
Identity = 70/193 (36.27%), Postives = 127/193 (65.80%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
            M +L+G+K RDFVLL  D++  RS++++  +  K+ +LS+++ +A +G+ GD   F +++ +N QL K+ +   +  +  A+F R+NLA+ LRT+ A +   LLLGG+D  + +P+L+W+D LG+L  VPF AHG    F++ ++D  +R  M+++EA  L+ +C +++ +R+L +   F   V+D +G RD+
Sbjct:    1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRC-DLLLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDL 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A7J7KPP8_BUGNE (Proteasome subunit beta n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KPP8_BUGNE)

HSP 1 Score: 152 bits (384), Expect = 5.830e-40
Identity = 75/194 (38.66%), Postives = 126/194 (64.95%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
            M  L+GV+G+DFVL+  DS+  RS+V M  ++ K+V +S+N+++  SGD GD   F E++ +N QL K+ +   +     A+F RRNLAE LR++ A Q V LLL G+DE  G P L+++D L ++  +PF  HG  S F+LS+ D  +   ++ +EA  L+  C +++++R+LV+   F ++++ +DG +D+P
Sbjct:    1 MECLIGVQGKDFVLVAADSSNARSIVRMKEDHDKMVPISDNVVMLTSGDVGDCLQFSEYIAKNLQLYKMRNGYELSPEAAANFTRRNLAESLRSRNAYQ-VNLLLAGYDEKTG-PSLYYMDYLASMNKLPFAVHGYGSFFSLSIFDRYYTPDVTKEEAYELLNKCVQEIQKRFLVNMPRFKVRMISKDGIKDMP 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A8J1XMY1_OWEFU (Proteasome subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU)

HSP 1 Score: 152 bits (384), Expect = 6.010e-40
Identity = 76/194 (39.18%), Postives = 125/194 (64.43%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
            M  L+G+KG+DFV++  D+   RS+V M  ++ K+ +LS+ +++A SG+ GD   F E++ +N QL K+ +   +  R  A+F RRNLAE LR++   Q V +L+GG+DE  G P LF++D L AL   PF AHG  S F LSLLD  +R+ ++ + A  L+  C  ++++R++V+   F ++ +++DG  D+P
Sbjct:    1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETDG-PSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLP 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: UPI001E1D8910 (proteasome subunit beta type-2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8910)

HSP 1 Score: 152 bits (384), Expect = 6.370e-40
Identity = 72/194 (37.11%), Postives = 125/194 (64.43%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
            M  L+G++G+DFVL+  D+   RS+V M  +Y K+ +L++N+L+  +G+ GD   F E++ +N QL K+ +   +     A+F R+NLA+ LR+Q     V LLL G+D+  G P L+++D L +L  +PF AHG  + F +S++D  + E ++L+EA+ L+  C  ++ +R++V+   F ++ VD+DG RD+P
Sbjct:    1 MECLIGIQGKDFVLVAADTVSARSIVSMKQDYDKMFKLNDNLLMLVTGESGDTVQFAEYIGKNIQLYKMRNGYELSPSAAANFTRKNLADYLRSQ-TPYMVNLLLAGYDKDEG-PSLYFMDYLASLNKLPFAAHGYGALFTMSIMDRHYYEDITLEEAKELLSKCVNEIRQRFIVNMPTFKVRCVDKDGVRDLP 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A0D2X0E4_CAPO3 (Proteasome subunit beta n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0E4_CAPO3)

HSP 1 Score: 151 bits (381), Expect = 1.630e-39
Identity = 75/193 (38.86%), Postives = 124/193 (64.25%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
            M+ ++ + G+DFV+   D+   RS+V+M +++ K+V++S ++L   +G  GDV  F E++++N +L ++ +   +     AH+ R  LA  LR+ GA Q V LLL G+D +  Q +L+++D L AL  VPFGAHG AS F LSLLD  +   ++LDEA  LM+ C  ++++R +++   F+++VVD  G RDV
Sbjct:    1 MDCIIAISGKDFVVAAADAMAARSIVVMKSDHEKMVQMSPHLLQVCNGPSGDVVQFSEFIQKNIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGAYQ-VNLLLAGYDTINKQAELYFMDYLAALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDEALRLMKMCIAEVQKRLVINLPKFTVRVVDAQGTRDV 192          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A1Y1NKF7_PHOPY (Proteasome subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY)

HSP 1 Score: 150 bits (379), Expect = 3.470e-39
Identity = 73/196 (37.24%), Postives = 127/196 (64.80%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
            M  LLG+K RDFV++  D     S+++M T+ +K+  LS  +++A SG+QGD   F E++ +N QL K+ +   +G +  A+F RRNLAE LR++ A   V +LL G+D+  G P L+++D L +L +V F +HG    F+L+++D  + E ++ +EA  +M+ C R++ +R +V+   F ++++D+DG RD+P +
Sbjct:    1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQEG-PQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194          
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A163JZA9_ABSGL (Proteasome subunit beta n=2 Tax=Absidia TaxID=4828 RepID=A0A163JZA9_ABSGL)

HSP 1 Score: 149 bits (377), Expect = 5.670e-39
Identity = 72/193 (37.31%), Postives = 125/193 (64.77%), Query Frame = 3
Query:   63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
            M  L G+ G+DF LL  D+   RS+V+M     K  +LS N ++  SG+ GD   F E+++RN +L  + +S  +  +++A+F RR +A+ LR++    +V ++LGG+D   G+P+LFW+D LGA+ S+P+ A G  + F  SL+D  ++  M++DEA+ L++ C  +L+ R++V+   F++K+V +DG +DV
Sbjct:    1 MECLFGITGKDFTLLAADTVQARSIVVMKGTEDKSRQLSPNTVLLYSGEPGDTVNFAEYIQRNIKLYSIRNSIELSPKSIANFTRREIADSLRSKHP-YSVNMILGGYDVKEGKPELFWIDYLGAMASLPYAAQGYGAYFCTSLMDRYYKPDMNVDEAKALLQRCLDELKTRFIVNMPKFNVKLVSKDGVQDV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG41_9PHAE3.660e-11788.78Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKH0_ECTSI9.230e-10788.89Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A1X2G7A8_9FUNG3.580e-4138.34Proteasome subunit beta n=1 Tax=Hesseltinella vesi... [more]
UPI00026585B14.300e-4036.27proteasome subunit beta type-2 n=1 Tax=Galendromus... [more]
A0A7J7KPP8_BUGNE5.830e-4038.66Proteasome subunit beta n=1 Tax=Bugula neritina Ta... [more]
A0A8J1XMY1_OWEFU6.010e-4039.18Proteasome subunit beta n=1 Tax=Owenia fusiformis ... [more]
UPI001E1D89106.370e-4037.11proteasome subunit beta type-2-like n=1 Tax=Mercen... [more]
A0A0D2X0E4_CAPO31.630e-3938.86Proteasome subunit beta n=1 Tax=Capsaspora owczarz... [more]
A0A1Y1NKF7_PHOPY3.470e-3937.24Proteasome subunit beta n=1 Tax=Photinus pyralis T... [more]
A0A163JZA9_ABSGL5.670e-3937.31Proteasome subunit beta n=2 Tax=Absidia TaxID=4828... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig9contigP-littoralis_Contig9:377236..381028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKH0
Preferred nameSCYL2
PFAMsPkinase,Proteasome
Model size1475
Max annot lvl2759|Eukaryota
KEGG koko:K02734,ko:K08471,ko:K12847,ko:K16738,ko:K17541,ko:K18626
KEGG Pathwayko03040,ko03050,map03040,map03050
KEGG ModuleM00337,M00340,M00354
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000166,GO:0000502,GO:0002090,GO:0002092,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0007034,GO:0007041,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007346,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016055,GO:0016192,GO:0016301,GO:0016310,GO:0016504,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030071,GO:0030100,GO:0030111,GO:0030135,GO:0030136,GO:0030162,GO:0030163,GO:0030178,GO:0030234,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031410,GO:0031597,GO:0031623,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032588,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043112,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045807,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046907,GO:0048046,GO:0048259,GO:0048260,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060070,GO:0060255,GO:0060627,GO:0060828,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0090090,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098805,GO:0098827,GO:0140096,GO:0198738,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902531,GO:1902532,GO:1903052,GO:1903364,GO:1903432,GO:1904262,GO:1905114,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2000286,GO:2000369,GO:2000370,GO:2001252
Exons5
Evalue2.17e-111
EggNOG OGsCOG0638@1|root,KOG2137@1|root,KOG0177@2759|Eukaryota,KOG2137@2759|Eukaryota
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_002115.1
EC3.4.25.1
Descriptionreceptor internalization involved in canonical Wnt signaling pathway
Cds size786
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko03036,ko03041,ko03051,ko04030,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig9.95.2prot_P-littoralis_Contig9.95.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig9 377881..380984 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791791.0358603-UTR-P-littoralis_Contig9:377235..3778801680791791.0358603-UTR-P-littoralis_Contig9:377235..377880Pylaiella littoralis U1_48UTRP-littoralis_Contig9 377236..377880 -
1680791791.1206455-UTR-P-littoralis_Contig9:380984..3810281680791791.1206455-UTR-P-littoralis_Contig9:380984..381028Pylaiella littoralis U1_48UTRP-littoralis_Contig9 380985..381028 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791791.0501306-CDS-P-littoralis_Contig9:377880..3783181680791791.0501306-CDS-P-littoralis_Contig9:377880..378318Pylaiella littoralis U1_48CDSP-littoralis_Contig9 377881..378318 -
1680791791.0628579-CDS-P-littoralis_Contig9:378868..3790151680791791.0628579-CDS-P-littoralis_Contig9:378868..379015Pylaiella littoralis U1_48CDSP-littoralis_Contig9 378869..379015 -
1680791791.0772-CDS-P-littoralis_Contig9:379523..3796161680791791.0772-CDS-P-littoralis_Contig9:379523..379616Pylaiella littoralis U1_48CDSP-littoralis_Contig9 379524..379616 -
1680791791.0888317-CDS-P-littoralis_Contig9:380387..3804791680791791.0888317-CDS-P-littoralis_Contig9:380387..380479Pylaiella littoralis U1_48CDSP-littoralis_Contig9 380388..380479 -
1680791791.104709-CDS-P-littoralis_Contig9:380968..3809841680791791.104709-CDS-P-littoralis_Contig9:380968..380984Pylaiella littoralis U1_48CDSP-littoralis_Contig9 380969..380984 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig9.95.2

>prot_P-littoralis_Contig9.95.2 ID=prot_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp
MTMLTEMNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLV
AASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRT
QGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSL
LDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP
CVGSKQGGGLSGGSGGGGEGGGGDGSESGSSGVEHPDRRRRTRPGVAAPP
PVVAGRSVKTF*
back to top

mRNA from alignment at P-littoralis_Contig9:377236..381028-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig9.95.2 ID=mRNA_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3793bp|location=Sequence derived from alignment at P-littoralis_Contig9:377236..381028- (Pylaiella littoralis U1_48)
GGCCCTTACACTGCTTCATTTTGCCCTCGGCAGCCGAAGATCTCATGACC ATGCTCACAGGTATATTACGTACAATATTATACAGCTGTATTTTTATTCA ATCATGATGATCCTACCTCTGTCGCTGCGTTGCACATCATTTTCTTGGAT ACTGGTGTATTATGTGAACGTATAATATCACAGCAGTATGATCCCGTGTA TAGAGGACAAGTGCAAGATTAAGATTTCGGACGGGGGGGGTGCGATCGCT TCTCCCGGCCCGAAATATTTCGACAACGGGGATGGTGCCAGTAATGTTGG AGAGGGTGCCTTTGAGAAAATGTTCGCCGAGGAGGCCTTCTCCCGAAATC TGATGGTTTGACGTCGGCAGGCACCGTCCCTGTGGTCGAGAAAACGGTCG GACGGGGTGAAACAACCGCGCACCCCCTGCGCGAAACTCTCGCCACTTCT GCGGTAAAAGCATCGTCCTGCTGCGCTCCTGTTCGCAAAAGTGTTAATGG TGACCTTCAAACGTCTTCCTCGGCTCTTGCCCTGTACTGCTCGTCGCAGA GATGAACACCCTGCTGGGAGTGAAGGGTCGTGACTTCGTCCTGCTAGGGG GCGATAGTGCCTTCTTCCGGTCAGTGGTGATCATGGACACGGTGAGTTAC CGTTCCTTCAAAACGTTTTCTGTCCCCAGAGTGGTGCGGCAGTTGAAGAT CTTGCGACCACGCACATCACCGGGGTCAGATTGCAAGGATCTTGGTACGA AACAAACATGCACGCGCACCTCGCACACAATATTTGCGGGTTGTGCGACA TTCCTGGCCAGCACAAGACAAAATTTTCATTTGCCGGTTCTCGGGGTGGC AACTCTTCTTTCGAGCTTTAGGAGCGTATCCACTACCCCGTGAGGTGTCT CGGCCGGTTTGTTGACGTTTTGAAACGCCCTCGCGACTTTTGAATGTTTG AAGCCCGTCCAGTGCTGTCAAGCTCTACTATAATCAAGCTCTGTTATCTT CTCTATGGCTTCAAGCTCTGTCACCTTGGTCCTATACGGGGTAGTTCTTT TTCCCACATAAATTCGCATGTTTCCGCACTACATTTATCCCCTGGCACGC ATGATTCACTGGGCGCCTCTCTGGTTTGGAAACACAACAACATGTTTGTG CCACATACGACAAATACTTGTAAATTATTTCTCTCAAGTCACGTACTTGT CCAAAGTGGCCGACTCGCGTCCGGGCGGCGCCAACAGGCTGAAATTAATT GAGGATAGTGGCGACCTGCCCATCCACGGTCTAGAACTATTCTCCGGGTT GTTTCTTTTTTACTTTCCACGTCATGGCGATTTACTCACACTCGTAGAGC ACTCGTTCGCGCATGACTGCGATGGCCAACACGTGTGTGATGGTTACATG AAACGTTTACAGGAATACCACAAAGTGGTGGAGCTATCGGAGAACATGCT GGTGGCGGCGTCGGGAGACCAGGGTGACGTCGAGATGTTCGTGGAGTGGC TAAAGGTAAGAAATCACGGCGTTTTTATCCCGTTCCAGGGTTGTCATCTT GTGATGCACCACTCTACATGAGCTTATTTTTGGACTCTTGTGGTTTACCT GCTGCTCGAACATGTAACAGAGTGTTTCAATATCGGGTGTTTTCCATCCG TTGACGACCCGCGGGAAGAGATGTTCTGGCGTGGCTGGTCGTCAGGCGGA TTGCTGATCCGGCTGAAGCCACAGCAGTAGCCTCATGTGCATTAAAAGAT GCGTAAATTTATTACATTGCTGAAACGAGCAGAGGCCAGCAAAGTGTCAC TACCTTATTTTTACGAATACTCCCTCCACAGCATCGTTAGAAAGCCAGCA CCCGCATGCACGTTTCGTGTGCTCACCAGTTCCACGTCGTCGCCTTCCTG TGCGCAGCGCATGTCTGGCTTGTTTCAGCTTACCGGTACGCGTCTCGATC CGGATCGCGCGCGTGTGTGTGTGTGTGTGTGTGCATGTTTGTTTGATTGT GTGTTTCTTCCAGCGTAACACACAGCTGATGAAACTTGAGTCCTCTCGAC CGGTGGGCGTGCGCACGCTGGCGCACTTTGCGAGAAGGAACTTGGCGGAG AAGTTGCGCACACAGGGGGCGGGGCAGGCCGTCACGTTGCTGCTCGGTGG ATGGGACGAGGTACGCGATATCTTTGTTGCTTGCTTGCCTGCCTGCCTGC TTGCTTGCTTGCTTGCTCAAACTGTTTGTTGACGGCGTACATACAAACGC GCACAACCAGTTTTGCTTTCTCCGCGTTGGGATGTTTGTTGCACTTTTTT GCGTGGCAGAATGTACTCAATGCCTTGGTCTGTCCACCGGGTCACTTTTG TCCGAACATCACCGGGTCACTTTATCCCAGCTGGATGGGTTGTTTGACAC ATGGCGAGGAGTGTCACGACCGAGTATTCTCACTTCTTACTTTGGAGAAG TGCGCCTCCCACACCTTTAGGGACATGTCATCTTCGTGTTCACCAGGCAA AATATCCCGGCCGCCGGATGACAAGAGCACGACAACGGCTATTGCCGTCG ATATTTGTTTTCACTTCCGTGCCGCTCTGAACATCTACCCCCCTTGCACT CTCTAGTCCGCTGCCTATGCTTTTGCACTTTTCGGGTACGGACAAAAGGC GCATTTGGTGATCGCGCGCATGTTGCATTGCTTTGCTCTCCACGCTAACC AACGTCACAGGTTGCTGGTCAGCCAGACCTTTTCTGGCTGGACGCTTTGG GCGCTCTCCAAAGCGTCCCCTTCGGCGCGCACGGCCTCGCCTCGCGGTTT GCTCTGAGCCTTCTCGACAACGGCTTTCGCGAAGGCATGTCCCTGGATGA AGCGCGACATCTCATGGAGTCGTGCTTCCGGCAGCTGGAACGGCGATACC TCGTTAGTTCCGTGGGCTTCAGCATTAAGGTTGTAGACAGAGATGGTTGC AGGGACGTGCCATGTGTGGGTTCAAAGCAGGGGGGGGGACTCAGCGGTGG AAGTGGAGGTGGAGGGGAAGGGGGTGGTGGTGATGGCAGTGAGAGCGGAT CGAGCGGGGTGGAGCACCCTGACAGACGACGACGCACTAGGCCAGGGGTG GCGGCTCCCCCACCTGTCGTTGCAGGGCGTAGCGTGAAAACCTTCTAGCT GGGGCTTGACAGATGGTTATTACGAGCGGACTCGTTGTGCAGCTCCTCTT CGTGCTTACTTGTTGCGTGGCTCGAATTTGCTGGCTTGATTGATGATAAT CAAGTTTAGGCGCGTCCTCCTACGATACATGTGTTTGTACATGTGTTTGT GTACGGTCATCACTATTATCGCTACAGCTGCTCTTCAGTTGCGAAAAGCA AAGGACGGTCGTGTTAAGCTCGGTCGTGATACGGTTGTGGAGAAAAAATG CATGCCTTGATTTCCAATAAAATTTTTGATTCGTGGGCGCCTGGAGTGGA AGGAGGTGGTGCGTAAAAAGGAAACTGATCGTTGTTGCTGTCGACTACAG TATTTCTCAGCCTCGGATGCAGCTAGATCGGATCGCTGAAACGTTGGAGA AGCTCTGTGGGACGTCTATCGAGCTCCTTTTAGTGTATTCCAGTGTTGGA GATGAGCCCAACAACATTCTCATTCGATCTTTTTTGGATCGAGGAAAAAA AGACGCGATACAGTAGTCGATAATTTTTCGGTACTCGAGAAAATGTCGGA TGCCGATACCCGATCCCAATTTCAGTCGCGATCCGGTCGATCTCGATGTC GATACGGCCATATGGAGAGATCGACATCAATTTTGAAGGGGAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig9:377236..381028-

>mRNA_P-littoralis_Contig9.95.2 ID=mRNA_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig9:377236..381028- (Pylaiella littoralis U1_48)
ATGACCATGCTCACAGAGATGAACACCCTGCTGGGAGTGAAGGGTCGTGA
CTTCGTCCTGCTAGGGGGCGATAGTGCCTTCTTCCGGTCAGTGGTGATCA
TGGACACGGAATACCACAAAGTGGTGGAGCTATCGGAGAACATGCTGGTG
GCGGCGTCGGGAGACCAGGGTGACGTCGAGATGTTCGTGGAGTGGCTAAA
GCGTAACACACAGCTGATGAAACTTGAGTCCTCTCGACCGGTGGGCGTGC
GCACGCTGGCGCACTTTGCGAGAAGGAACTTGGCGGAGAAGTTGCGCACA
CAGGGGGCGGGGCAGGCCGTCACGTTGCTGCTCGGTGGATGGGACGAGGT
TGCTGGTCAGCCAGACCTTTTCTGGCTGGACGCTTTGGGCGCTCTCCAAA
GCGTCCCCTTCGGCGCGCACGGCCTCGCCTCGCGGTTTGCTCTGAGCCTT
CTCGACAACGGCTTTCGCGAAGGCATGTCCCTGGATGAAGCGCGACATCT
CATGGAGTCGTGCTTCCGGCAGCTGGAACGGCGATACCTCGTTAGTTCCG
TGGGCTTCAGCATTAAGGTTGTAGACAGAGATGGTTGCAGGGACGTGCCA
TGTGTGGGTTCAAAGCAGGGGGGGGGACTCAGCGGTGGAAGTGGAGGTGG
AGGGGAAGGGGGTGGTGGTGATGGCAGTGAGAGCGGATCGAGCGGGGTGG
AGCACCCTGACAGACGACGACGCACTAGGCCAGGGGTGGCGGCTCCCCCA
CCTGTCGTTGCAGGGCGTAGCGTGAAAACCTTCTAG
back to top