mRNA_P-littoralis_Contig9.240.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: A0A6H5K835_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K835_9PHAE) HSP 1 Score: 1425 bits (3690), Expect = 0.000e+0 Identity = 764/1025 (74.54%), Postives = 846/1025 (82.54%), Query Frame = 2
Query: 170 ISLLIMASMMCTGLSFCVPRIV-RQRTPLLSTVRMALSMPAATSPKTTDDLDFQMLGELASKVVQGSAKRAVPAGTQLKRRRAWDLFLDGPDGSAGAAVLVVSKKSTFTLEDARIALGIINDETAARGLNGEAKGAHQLLLTTRAGVAPAAGAFLKGAQANANCNGEASASIFAIMRWEKLQQLVREGGLRRHLTTXXXXXXXXXSSAPKAPPFTLPAWLLEERERGLGAVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGP-NDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLRE--GLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITPSVARAASVGDSILDSINGDSASTQQDRLDRSDDHVASWAEHSLPPDQASGVQLLYDLAALNGEGRRGRGSSREQDAAADKHAPLLAATENTTRALTRLAEQASTKMSLAATKTDYKEATLWRDRRDALLAAVQQI 3232
+SLL MA M+ G +F +PR R L S V+++ + SP +L ELAS VVQG A+RAVPAG+QLKRRRAWDL+LDG S AAVLVVSK+STFTLEDAR AL I++DE AAR LN E K QLLL TRA VAPAA AFL+GA AN + A+MRWE+LQQLV++GGL RHLT S P AP F LPAWL++ERERG+GA+FDL SPFEPAGDQPEAIKALS+G+++GKRHQTLLGATGTGKTFI+ANVIQEA LPTLVLAPNKVLASQLTNELRALFPNNAVE FVSYYDYYLPEAFN+ASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIR++VGQEWTDGWR L +HLEQGLFY PKHN+EEFEALPRGS+R + EGGG + EIGPASDE VVRVT+DA GVV+RIQ VPI GG +++ + E +SDL D GH KP G + +DV+AHVIYPAKHHVVG+GEM +VMS I EEMEERCSQLGL GK+LEAERLRQRTENDLLLL AVGTCKGVENYSRHL+GR GDPPETLVDYFPE++WLL+VDESHVSAPQLGAMWGGDQARK+KLVEHGFRLPSALDNRPLKA EFWSKV+K+IFVSATPGKFELEL LGAGKSGGLGWDEIG LVDAQAVIRPTGITDPPVDIRPS+GQVSDMVQECK RG RGERVLVTALTKQMAEDLS+FL+EQGVPTA+LHSGVKPMQRLELLRQLRSG++DVIVGVNLLRE GLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEA RA++YADR+TPSM+RALAETDRRR+IQ HN+LHGITPSVA+AASVGDSILDSINGD+ TQ++ S DHVASWA HSL PDQ VQLLYDLAA NG+G +A +H LL +E+TTRAL RLAEQASTKMS AATKTD+KEA LWRDRRDALL+ + I
Sbjct: 5 LSLLFMAGMLHRGTAFGLPRFAQRSSATLASWVKVSAAAETVQSPPVATKDTSSLLSELASGVVQGKAERAVPAGSQLKRRRAWDLYLDG---SEAAAVLVVSKRSTFTLEDARTALRIMSDEAAARCLNDETKRVRQLLLATRAAVAPAAEAFLQGAHANLGQSDFGETRGVAVMRWEQLQQLVQDGGLGRHLTRSRRRGG---SGDPNAPSFALPAWLVKERERGVGAMFDLDSPFEPAGDQPEAIKALSQGIEEGKRHQTLLGATGTGKTFIIANVIQEARLPTLVLAPNKVLASQLTNELRALFPNNAVELFVSYYDYYLPEAFNSASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRIIVGQEWTDGWRALAKHLEQGLFYIPKHNREEFEALPRGSFRSVFAEGGGGVIEIGPASDEAVVRVTLDAAGVVRRIQVVPIVGGGKTRADKEREPHHDLSDLLTAP-----------DRGHDKPLVGSEPALDDVDAHVIYPAKHHVVGRGEMEDVMSKISEEMEERCSQLGLGGKILEAERLRQRTENDLLLLGAVGTCKGVENYSRHLAGRGPGDPPETLVDYFPENEWLLIVDESHVSAPQLGAMWGGDQARKKKLVEHGFRLPSALDNRPLKADEFWSKVDKTIFVSATPGKFELELATLGAGKSGGLGWDEIGDLVDAQAVIRPTGITDPPVDIRPSKGQVSDMVQECKTRGGRGERVLVTALTKQMAEDLSAFLMEQGVPTAYLHSGVKPMQRLELLRQLRSGEIDVIVGVNLLREARGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRITPSMERALAETDRRREIQTRHNKLHGITPSVAKAASVGDSILDSINGDAVHTQREGRYSSSDHVASWANHSLLPDQ---VQLLYDLAAQNGKG------------SAHQHKSLLTPSEDTTRALMRLAEQASTKMSSAATKTDFKEAALWRDRRDALLSTLSTI 997
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: UPI00034B0E32 (excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00034B0E32) HSP 1 Score: 624 bits (1609), Expect = 9.310e-207 Identity = 343/656 (52.29%), Postives = 443/656 (67.53%), Query Frame = 2
Query: 860 FDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP 2827
F L +PF+P GDQP+AI L+ G+ G R+QTLLGATGTGKTF V VI++ P LVLA NK LA+QL NELR FP+NAVE+F+SYYDYY PEA+ +DTYI+K IND+ID +RHSATRSL ERRDVIVVAS+SCIYGLG+PS+YL+ASI + VG+E R L + L + ++++ + E L RG +R+ G + EIGPA ++ ++RV GD+ +A I + V GS TD IYPA+H V + + AI+EE+EER +L +GKLLEA+RL QRT DL +L VG C GVENYSRHL+GR AG+PPE L+DYFP+D WLLV+DESHV+ PQ+ M+ GDQ+RK+ LV+HGFRLPSA DNRPLKA EFW KV + +FVSATPG +ELE++ G + A+ +IRPTG+ DP + +RP+EGQ+ D++ E K R +RGER LVT LTK+MAEDL+ +L E+G+ +LHS ++ ++R+E+L+ LR G DV++GVNLLREGL+LPEVSLV ILDAD EGFLR++ +L+QTIGRA RH +AIMYAD +T SMK+A+ ETDRRR IQ HNR HGITP
Sbjct: 4 FHLEAPFKPTGDQPQAIAQLAAGISAGYRYQTLLGATGTGKTFSVGVVIEKTGKPALVLAHNKTLAAQLCNELREFFPHNAVEYFISYYDYYQPEAYIPVTDTYIEKTAAINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKASIPLRVGEELNQ--RQLLRDLA-----SVQYSRNDLE-LTRGRFRV-----KGDVLEIGPAYEDRIIRVEFF---------------------GDEIDA---IRYIDPVTGSILQSTDALN---------------------IYPARHFVTPEDRLQEACEAIREELEERLEELRREGKLLEAQRLEQRTRYDLEMLQEVGYCNGVENYSRHLAGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDQSRKKVLVDHGFRLPSAADNRPLKAEEFWQKVKQCVFVSATPGDWELEISE---------------GRI-AEQIIRPTGVVDPEIFVRPTEGQIDDLLGEIKDRVSRGERALVTTLTKRMAEDLTEYLQERGIRVRYLHSDIQSIERIEILQALREGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAIMYADNLTDSMKKAIDETDRRRGIQVAHNRTHGITP 584
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: UPI0019FDE9AF (Excinuclease ABC subunit UvrB n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FDE9AF) HSP 1 Score: 624 bits (1609), Expect = 9.970e-207 Identity = 343/656 (52.29%), Postives = 443/656 (67.53%), Query Frame = 2
Query: 860 FDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP 2827
F L +PF+P GDQP+AI L +G++ G R+QTLLGATGTGKTF +A VI++ PTLVLA NK LA+QL NELR FPNNAVE+F+SYYDYY PEA+ +DTYI+K IND+ID +RHSATRSL ERRDVIVVAS+SCIYGLG+PS+YL+ASI + VG+E Q L + + N + L RG +R+ G + EIGPA ++ ++RV GD+ EA + I P G+ V+A IYPA+H V + ++ + AIK+E+EER +L +GKLLEA+RL QRT DL +L VG C G+ENYSRHL+GR AG+PPE L+DYFP+D WLLV+DESHV+ PQ+ M+ GD+ARK+ L+EHGFRLPSA DNRPLKA EFW KVN+ IF+SATPG +E+E++ G V Q +IRPTGI DP + +RP+EGQ+ D++ E K R AR ERVLVT LTK+MAEDL+ +L E+ + +LHS + ++R+E+L+ LR G DV++GVNLLREGL+LPEVSLV ILDAD EGFLR++ AL+QTIGRA RH +AI+YAD +T SM +A+ ET+RRR+IQ +NRLHGITP
Sbjct: 5 FSLQAPFKPTGDQPQAIAQLIQGIQAGYRYQTLLGATGTGKTFSIAAVIEKVGKPTLVLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYIPVTDTYIEKTASINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKASIPLRVGEEINQ-----RQLLRELVSIQYSRNDTD---LGRGRFRL-----KGDVLEIGPAYEDRIIRVEFF---------------------GDEIEAIRYID------------------------PVNGKILQSVDALNIYPARHFVTPEEQLKKAIIAIKQELEERLQELKREGKLLEAQRLEQRTLYDLEMLQEVGYCNGIENYSRHLTGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDKARKKVLIEHGFRLPSAADNRPLKAEEFWEKVNQCIFISATPGDWEIEVSE---------------GRVVEQ-IIRPTGIVDPEIFVRPTEGQIDDLLAEIKERVARNERVLVTTLTKRMAEDLTEYLQERLIRVRYLHSDIDSIERIEILQDLREGNFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERALIQTIGRAARHVRGQAILYADNLTESMMKAIQETERRRNIQLAYNRLHGITP 585
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: UPI001689F5D6 (excinuclease ABC subunit UvrB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001689F5D6) HSP 1 Score: 615 bits (1587), Expect = 1.890e-203 Identity = 351/670 (52.39%), Postives = 451/670 (67.31%), Query Frame = 2
Query: 860 FDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP-SVARAASVGDSIL 2866
F L +PF+P GDQP+AI L +G++ G +QTLLGATGTGKTF +A+VIQ+ PTLVLA NK LA+QL NELR FPNNAVE+FVSYYDYY PEA+ +DTYI+K IND+ID +RHSATRSL ER+DVIVVAS+SCIYGLG+PS+YL+ASI + VG E R L + L G+ YT + + + L RG +R+ G + EIGPA ++ ++RV GD+ +A + + P G VEA IYPA+H V Q + AI+ E+EER +L +GKLLEA+RL QR DL +L VG C GVENYSRHL+GR AG+PPE L+DYFP+D WLLV+DESHVS PQ+ AM+ GDQARK+ L+EHGFRLPSA DNRPLKA EFW KVN+ IFVSATPG +E+E + G V A+ VIRPTG+ DP + +RP+ GQ+ D++ E K R R ER LVT LTK+MAEDL+ +L E+G+ +LHS ++ ++R+E+L+ LR G+ DV++GVNLLREGL+LPEVSLV ILDAD EGFLR+ +L+QTIGRA RH +AI+YAD +T SM +A+ ETDRRR IQ +N+LHGITP S+A+ + G++IL
Sbjct: 4 FHLQAPFQPTGDQPQAIAQLVKGIQAGHPYQTLLGATGTGKTFSIASVIQQIRKPTLVLAHNKTLAAQLCNELRDFFPNNAVEYFVSYYDYYQPEAYIPVTDTYIEKTASINDEIDMLRHSATRSLFERQDVIVVASISCIYGLGIPSEYLKASIPLKVGNEVNQ--RQLLRDLA-GVQYT----RNDLD-LGRGRFRV-----KGDVLEIGPAYEDRIIRVEFF---------------------GDEIDAIRYLD------------------------PVTGNILQSVEALNIYPARHFVTPQDRLDIACQAIESELEERLEELQKEGKLLEAQRLEQRARYDLEMLREVGYCNGVENYSRHLAGRIAGEPPECLIDYFPKD-WLLVIDESHVSVPQIRAMYNGDQARKKVLIEHGFRLPSAADNRPLKADEFWEKVNQCIFVSATPGDWEIEKSE---------------GHV-AEQVIRPTGVIDPEIFVRPTSGQIDDLLGEIKDRVDRKERTLVTTLTKRMAEDLTEYLQERGIKVRYLHSEIQSIERIEILQALREGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAARSLIQTIGRAARHVQGQAILYADNLTDSMIKAIDETDRRRGIQTAYNKLHGITPQSIAKKS--GNAIL 596
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: UPI00168A00C7 (excinuclease ABC subunit UvrB n=2 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI00168A00C7) HSP 1 Score: 613 bits (1581), Expect = 1.390e-202 Identity = 341/657 (51.90%), Postives = 447/657 (68.04%), Query Frame = 2
Query: 860 FDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAV-PISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP 2827
F L +PF+P GDQP+AI L ++ G R QTLLGATGTGKTF V VI++ PTLVLA NK LA+QL NELR FPNNAVE+FVSYYDYY PEA+ +DTYI+K IND+ID +RHSATRSL ERRDVIVVAS+SCIYGLG+PS+YL+A+I + VG+E R + + L + ++N E + RG +R+ G + EIGPA ++ +VRV G + I+ V P++G E QS+ +A IYPA+H V ++ + I++E++ER ++L DGKLLEA+RL QRT DL +L VG C GVENYSRHL+GR AG+PPE L+DYFP+D WLLV+DESHV+ PQ+ M+ GDQARK+ L+EHGFRLPSA DNRPLKA EFW+KVN+ IFVSATPG +E+E++A D + + VIRPTG+ DP + +RP+EGQV D++ E K R R ERVL+T LTK+MAEDL+ +L ++G+ +LHS ++ ++R+E+L+ LRSG DV++GVNLLREGL+LPEVSLV ILDAD EGFLR++ +L+QTIGRA RH +AI+YAD +T SM +A+ ET+RRR+IQ +NR+HGITP
Sbjct: 4 FSLQAPFKPTGDQPQAIDRLVEHIQAGHRCQTLLGATGTGKTFTVGAVIEKVGKPTLVLAHNKTLAAQLCNELREFFPNNAVEYFVSYYDYYQPEAYLPVTDTYIEKTAAINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAIPLQVGKEVNQ--RQILRDL--AIVQYNRNNTE----IGRGKFRL-----RGDVLEIGPAYEDRIVRVEF-FGDEIDAIRYVDPVTG----------EIIQSL-----------------------------------DAINIYPARHFVTPDEKLEAACNDIQQELKERLAELQKDGKLLEAQRLDQRTRYDLEMLREVGYCNGVENYSRHLAGRHAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDQARKKVLIEHGFRLPSAADNRPLKAEEFWTKVNQCIFVSATPGNWEIEISA-----------DRV-----VEQVIRPTGVVDPEIFVRPTEGQVDDLLGEIKDRVKRQERVLITTLTKRMAEDLTEYLQDRGIRVRYLHSEIQSIERIEILQDLRSGSFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVQGQAILYADNLTDSMIKAIDETERRRNIQIAYNRMHGITP 584
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: D8FYM3_9CYAN (UvrABC system protein B n=2 Tax=Oscillatoriales TaxID=1150 RepID=D8FYM3_9CYAN) HSP 1 Score: 613 bits (1581), Expect = 1.480e-202 Identity = 343/669 (51.27%), Postives = 445/669 (66.52%), Query Frame = 2
Query: 848 LGAVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAV-PISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP-SVARAAS 2848
+G F L +PFEP GDQP+AI L+ G+ G R QTLLGATGTGKTF +A VI++ PTLVLA NK LA+QL NELR FPNNAVE+FVSYYDYY PEA+ A +DTYI+K IND+ID +RHSATRSL ERRD IVVAS+SCIYGLGMP++YL+A+I VG E R L + L ++++ + + L RG +R+ G + EIGPA ++ ++R+ G + I+ V P+SGG +Q VEA IYPA+H V + ++ AI+ E+E+ +L GKL+EA+RL QRT DL +L VG C GVENYSRHL+GR+AG+PPE L+DYFP+D WLLV+DESHV+ PQL M+ GDQARK+ L+EHGFRLPSA DNRPLKA EFW KVN+ IFVSATPG +E+E++ A VIRPTG+ DP + +RP+EGQ+ D++ E K R ER LVT LTK+MAEDL+ +L E+G+ +LHS ++ ++R+E+L+ LR G DV++GVNLLREGL+LPEVSLV ILDAD EGFLRS+ +L+QTIGRA RH +AI+Y D +T SM +A+ ETDRRR IQ +N++HGITP S+A+ +S
Sbjct: 1 MGDKFYLQAPFEPTGDQPKAIAQLTSGVLAGDRFQTLLGATGTGKTFSIAAVIEKVGRPTLVLAHNKTLAAQLCNELRGFFPNNAVEYFVSYYDYYQPEAYIAVTDTYIEKTAAINDEIDMLRHSATRSLFERRDAIVVASISCIYGLGMPAEYLKAAIPFQVGTEVNQ--RQLLRDL-----VNIQYSRNDLD-LGRGKFRV-----KGDVLEIGPAYEDRIIRIEF-FGDEIDAIRYVDPVSGGI-------------------IQ--------------------------SVEALNIYPARHFVTAEDKLEAACQAIEIEIEDSVEELKKAGKLVEAQRLEQRTRYDLEMLREVGYCNGVENYSRHLAGRNAGEPPECLIDYFPKD-WLLVIDESHVTVPQLRGMYNGDQARKKVLIEHGFRLPSAADNRPLKAEEFWEKVNQCIFVSATPGNWEIEISESRV----------------ADQVIRPTGLIDPEIYVRPTEGQIDDLLGEIKERVLLQERTLVTTLTKRMAEDLTEYLQERGIRVRYLHSEIQSIERIEILQSLRDGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARHVRGQAILYGDNLTDSMIKAIDETDRRRGIQLAYNKMHGITPQSIAKKSS 593
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: K9VQW6_9CYAN (UvrABC system protein B n=14 Tax=Cyanobacteria TaxID=1117 RepID=K9VQW6_9CYAN) HSP 1 Score: 613 bits (1581), Expect = 1.640e-202 Identity = 336/659 (50.99%), Postives = 446/659 (67.68%), Query Frame = 2
Query: 854 AVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAV-PISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP 2827
A F L +PF+P GDQP AI+ L +G++ G R QTLLGATGTGKTF +A+VI++ PTLVLA NK LA+QL NELR FPNNAVE+FVSYYDYY PEA+ A +DT+I+K IND+ID +RHSATRSL ERRDVIVVAS+SCIYGLGMP++YL+A+I + VG E + Q ++++ + + L RG +R+ G + EIGPA ++ ++RV G + I+ V P++G +Q S+ + IYPA+H V + ++ I+ E+E+R ++ GKLLEA+RL QRT DL +L VG C GVENYSRHL+GR+AG+PPE L+DYFP+D W+LV+DESHV+ PQ+ M+ GDQARK+ L+EHGFRLPSA DNRPLKA EFW+K N+ IFVSATPG +E+E++ G V A+ VIRPTG+ DP + +RP+EGQ+ D++ E K R +R ERVLVT LTK+MAEDL+ +L E+G+ +LHS ++ +QR+E+++ L+ GK DV++GVNLLREGL+LPEVSLV ILDAD EGFLRS +L+QTIGRA RH +AI+YAD +T SM +A+ ETDRRR IQ +N++HGITP
Sbjct: 6 ASFQLQAPFQPTGDQPLAIEQLVKGIEAGDRFQTLLGATGTGKTFSIASVIEKVGRPTLVLAHNKTLAAQLCNELRNFFPNNAVEYFVSYYDYYQPEAYIAVTDTFIEKTAAINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGMPAEYLKAAIPLQVGME-------VNQRQVLRDLVNVQYSRNDID-LGRGKFRV-----KGDVLEIGPAYEDRIIRVEF-FGDEIDAIRYVDPVTGKI-------------------LQSSTALN--------------------------IYPARHFVTAEDKLEAACQGIELELEDRLAEFEKQGKLLEAQRLEQRTRYDLEMLREVGYCNGVENYSRHLAGRNAGEPPECLIDYFPKD-WMLVIDESHVTVPQIRGMYNGDQARKKVLIEHGFRLPSAADNRPLKAEEFWAKENQCIFVSATPGDWEMEISE---------------GRV-AEQVIRPTGVIDPTIFVRPTEGQIDDLLGEIKERVSRDERVLVTTLTKRMAEDLTEYLQERGIRVRYLHSEIQSIQRIEIIQDLQDGKFDVLIGVNLLREGLDLPEVSLVVILDADKEGFLRSGRSLIQTIGRAARHVQGQAILYADNLTDSMVKAIDETDRRRGIQLAYNKMHGITP 588
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: A3YWN3_9SYNE (UvrABC system protein B n=4 Tax=Synechococcus TaxID=1129 RepID=A3YWN3_9SYNE) HSP 1 Score: 612 bits (1578), Expect = 4.290e-202 Identity = 345/671 (51.42%), Postives = 443/671 (66.02%), Query Frame = 2
Query: 854 AVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITPSVARAASVGDSIL 2866
A F+L +P+EP GDQP AI+AL G+ G+R+QTLLGATGTGKTF +ANVI P LVLA NK LA+QL NELR FPNNAVE+F+SYYDYY PEA+ SDTYI K IN++ID +RHSATRSL ER+DVIVVAS+SCIYGLG+PS+YL+A++R VG+ L L + + N E + RG +R+ G + EIGPA ++ +VR+ + GD+ EA + + P G+ +E IYPAKH V + + + ++AI++E+ +R L G+LLEA+RL QRT DL +L VG C GVENY+RHL+GR AG PPE L+DYFP DDWLLVVDESHV+ QL AM+ GDQARK+ LVEHGFRLPSA DNRPLKAAEFWSK ++IFVSATPG +E+E + G V AQ VIRPTG+ DP V++RP+EGQV D++ E + R R ER L+T LTK+MAEDL+ +L E GV +LHS + ++R+E+++ LR+G+ D +VGVNLLREGL+LPEVSLV ILDAD EGFLR++ +L+QTIGRA RH A++YAD +T SM RA++ET+RRR IQ T+N HGI PS A G++IL
Sbjct: 2 ARFELQAPYEPKGDQPTAIEALVDGVDAGERYQTLLGATGTGKTFTIANVIARTGRPALVLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYVPVSDTYIAKTASINEEIDMLRHSATRSLFERQDVIVVASISCIYGLGIPSEYLKAAVRFQVGEALN-----LRGSLRELVNNQYSRNDVE---VGRGRFRV-----KGDVLEIGPAYEDRLVRIELF---------------------GDEVEAIRYVD------------------------PTTGEILQSLETINIYPAKHFVTPKDRLESAIAAIRDELHQRLDVLHGQGRLLEAQRLEQRTTYDLEMLQQVGYCNGVENYARHLAGRPAGTPPECLIDYFP-DDWLLVVDESHVTCSQLHAMYNGDQARKQVLVEHGFRLPSAADNRPLKAAEFWSKARQTIFVSATPGTWEMEQSH---------------GHV-AQQVIRPTGVLDPVVEVRPTEGQVDDLLGEIRLRAGRDERTLITTLTKRMAEDLTDYLAENGVRVRYLHSEIHSIERIEIIQDLRNGEFDALVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVDGTALLYADNLTDSMARAISETERRRAIQQTYNETHGIIPSAA-GKRAGNAIL 596
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: A0A2W6ZF08_9CYAN (UvrABC system protein B n=4 Tax=Synechococcales TaxID=1890424 RepID=A0A2W6ZF08_9CYAN) HSP 1 Score: 611 bits (1576), Expect = 8.520e-202 Identity = 344/675 (50.96%), Postives = 446/675 (66.07%), Query Frame = 2
Query: 854 AVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALP-RGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITPSVARAASVGDSILDSI 2875
A F L +P+EP GDQP AI AL++G++ G+R QTLLGATGTGKTF +ANVI P LVLA NK LA+QL NELR FPNNAVE+F+SYYDYY PEA+ SDTYI K IN++ID +RHSATRSL ERRDVIVVAS+SCIYGLG+PS+YL+A++R VG+ TL +L L + + P RG +R+ G + EIGPA ++ +VR+ + GD+ EA + + P G+ ++ IYPAKH V + + ++AI++E+ R +L GKLLEA+RL QRT DL +L VG C GVENY+RHL+GR AG PPE L+DYFP DDWLLVVDESHV+ QL AM+ GD+ARK+ L++HGFRLPSA DNRPLKA EFW K +++IFVSATPG +ELE +G + A+ VIRPTG+ DP V++RPSEGQV D++ E + R RGER L+T LTK+MAEDL+ +L E G+ +LHS + ++R+E+++ LR+G D +VGVNLLREGL+LPEVSLV ILDAD EGFLR++ +L+QTIGRA RH + RA++YAD +T SM RA++ET+RRR IQ +N HGITPS A G+SIL ++
Sbjct: 2 ARFQLEAPYEPKGDQPSAIAALTKGIEGGERFQTLLGATGTGKTFSIANVIARTGRPALVLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYVPVSDTYIAKTASINEEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAVRFQVGE-------TL--NLRGSLRELVNNQYSRNDVEPGRGRFRV-----KGDVLEIGPAYEDRLVRIELF---------------------GDEVEAIRYVD------------------------PTTGEILQSLDTVNIYPAKHFVTPKDRLEAAVAAIRDELRLRLDELYSQGKLLEAQRLEQRTAYDLEMLKEVGYCNGVENYARHLAGRPAGTPPECLIDYFP-DDWLLVVDESHVTCSQLHAMYNGDRARKQVLIDHGFRLPSAADNRPLKAEEFWGKAHQTIFVSATPGSWELE--------------QSVGQI--AEQVIRPTGVLDPVVEVRPSEGQVDDLLGEIRQRADRGERSLITTLTKRMAEDLTDYLAENGLRVRYLHSEIHSIERIEIIQDLRNGVFDALVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHISGRALLYADNLTDSMARAISETERRRVIQHAYNEKHGITPSPA-GKRAGNSILSAL 599
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Match: UPI0008F9A26E (excinuclease ABC subunit UvrB n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9A26E) HSP 1 Score: 610 bits (1574), Expect = 1.530e-201 Identity = 342/658 (51.98%), Postives = 436/658 (66.26%), Query Frame = 2
Query: 854 AVFDLHSPFEPAGDQPEAIKALSRGLKKGKRHQTLLGATGTGKTFIVANVIQEASLPTLVLAPNKVLASQLTNELRALFPNNAVEFFVSYYDYYLPEAFNAASDTYIDKVVQINDDIDRMRHSATRSLLERRDVIVVASVSCIYGLGMPSKYLEASIRVVVGQEWTDGWRTLEQHLEQGLFYTPKHNQEEFEALPRGSYRIIPVEGGGRIFEIGPASDELVVRVTVDAGGVVQRIQAVPISGGAESKQGDKEEAPQSISDLFDVQGSSRVGTDVRGDWGHRKPPAGGQGPNDVEAHVIYPAKHHVVGQGEMANVMSAIKEEMEERCSQLGLDGKLLEAERLRQRTENDLLLLDAVGTCKGVENYSRHLSGRSAGDPPETLVDYFPEDDWLLVVDESHVSAPQLGAMWGGDQARKRKLVEHGFRLPSALDNRPLKAAEFWSKVNKSIFVSATPGKFELELTALGAGKSGGLGWDEIGGLVDAQAVIRPTGITDPPVDIRPSEGQVSDMVQECKARGARGERVLVTALTKQMAEDLSSFLVEQGVPTAFLHSGVKPMQRLELLRQLRSGKLDVIVGVNLLREGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEASRAIMYADRVTPSMKRALAETDRRRDIQATHNRLHGITP 2827
+ F L S ++P GDQP+AI L +G++ +R+QTLLGATGTGKTF++ANVI++ PTL+LA NK LA+QL NELR F +NAVE+F+SYYDYY PEA+ +DTYI+K IND+ID +RHSATRSL ERRDVIVVAS+SCIYGLG+PS+YL AS+R+ VG E R Q L N E L RG +R+ G + EIGPA ++ +VRV GD+ +A + I P G+ N ++ IYPA H V + ++ +I+ E+EER ++L GKL+EA+RL+QRT DL +L VG C+GVENYSRHL+ R+ GDPPE LVDYFP DDWLL VDESHV+ PQL M+ GDQ+RKR LVEHGFRLPSA DNRPL+A EFW KVN+ IFVSATPG +E+E + GG V Q +IRPTG+ DP + +RP+EGQV D+ E + R +R ERVLVT LTK+MAEDL+ +L E V ++HS + ++R+E+LR LR G DV+VGVNLLREGL+LPEVSLV ILDAD EGFLR++ +L+QTIGRA RH +AIMYAD +T SM++A+AET+RRR IQ +NR H ITP
Sbjct: 2 SAFHLQSAYQPTGDQPQAINQLVQGIEDQRRYQTLLGATGTGKTFVMANVIEKVGKPTLLLAHNKTLAAQLCNELRQYFSDNAVEYFISYYDYYQPEAYIPVTDTYIEKSASINDEIDMLRHSATRSLFERRDVIVVASISCIYGLGIPSEYLRASVRLQVGME-----RDQRQLLRDLAKIQYSRNDTE---LQRGRFRV-----KGDVLEIGPAYEDRIVRVEFF---------------------GDEIDAIRYID------------------------PVTGKTTNSLQGINIYPATHFVTPEEQLDQACQSIEAELEERVAELENQGKLVEAQRLKQRTRYDLEMLREVGFCQGVENYSRHLARRNPGDPPECLVDYFP-DDWLLFVDESHVTVPQLRGMYNGDQSRKRVLVEHGFRLPSAADNRPLRAEEFWQKVNQCIFVSATPGDWEVE---------------QSGGEVVEQ-IIRPTGVVDPEIAVRPTEGQVDDLYGEIQERASRSERVLVTTLTKRMAEDLTEYLQEHQVRVRYMHSEINAIERIEILRDLRQGTFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVNGQAIMYADTMTESMEKAIAETERRRKIQLEYNRQHNITP 584 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig9.240.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig9.240.2 >prot_P-littoralis_Contig9.240.2 ID=prot_P-littoralis_Contig9.240.2|Name=mRNA_P-littoralis_Contig9.240.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1047bp MFAISLLIMASMMCTGLSFCVPRIVRQRTPLLSTVRMALSMPAATSPKTTback to top mRNA from alignment at P-littoralis_Contig9:874959..883669- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig9.240.2 ID=mRNA_P-littoralis_Contig9.240.2|Name=mRNA_P-littoralis_Contig9.240.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8711bp|location=Sequence derived from alignment at P-littoralis_Contig9:874959..883669- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig9:874959..883669- >mRNA_P-littoralis_Contig9.240.2 ID=mRNA_P-littoralis_Contig9.240.2|Name=mRNA_P-littoralis_Contig9.240.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3141bp|location=Sequence derived from alignment at P-littoralis_Contig9:874959..883669- (Pylaiella littoralis U1_48)back to top |