mRNA_P-littoralis_Contig893.1.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig893.1.4
Unique NamemRNA_P-littoralis_Contig893.1.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 3.050e-32
Identity = 140/368 (38.04%), Postives = 180/368 (48.91%), Query Frame = 2
Query:  566 EKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGRSGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKI 1612
            +KVL  IVDAKAAA+ DS  T+ KKAD AA+ + MG   +  GNARCGPGA+ATSF +AV AD  A+            +   S  ++ GGA            RP   +  XXXXXXXXXXXXXXX             +  VPPLG DL   M + +I  LA     T EEAD FLN GFT D +   +A AMMV +L  +LC +R    V  YM        E+PG DG    ++ KL + YG    DF++  DA  +  GW +D   P   K    TKR+A +L+ G                P S+ +G    A A+         +   GNRG K R  T +L EDG+  FM  Q+  A  +
Sbjct:  184 DKVLTAIVDAKAAARHDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGWVSPASSIGGA------------RPASEASAXXXXXXXXXXXXXXXGLDDDFSPAGSGPSRKVPPLG-DLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPD--KVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGG---AHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSL 533          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5L4P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P2_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.770e-32
Identity = 144/355 (40.56%), Postives = 183/355 (51.55%), Query Frame = 2
Query:  566 EKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGR-SGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGI 1570
            +KVL  IVDAKAAA+ DS  T+ KKAD AA+ + MG   +  GNARCGP A+ TSF +AV AD  A+   ++ +AA   ASGR S  ++ GGA            RP    XXXXXXXXXXXXXXXXXX            +  VPPLG DL   M + +I  LA     T EEAD FLN GFT D +   +A AMMV +L  +LC +R    V  YM        E+PG DG    ++ KL + YG    DF++  DA  +  GW +D   P   K    TKR+A +L+ G                P S+ +G    A A+         +   GNRG K R  TN+L EDG+
Sbjct:    4 DKVLTAIVDAKAAARHDSEETKQKKADQAASHSAMGMWAINQGNARCGPSAKVTSFEEAVAADNIALGS-RSGAAAGGRASGRVSPASSIGGA------------RPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLG-DLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPD--KVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGG---AHAMSXXXXXXXXSGPSGNRGRKPRAKTNKLAEDGL 339          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KRQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ2_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.600e-26
Identity = 138/375 (36.80%), Postives = 183/375 (48.80%), Query Frame = 2
Query:  566 EKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAE--TASGR-SGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKIASSR 1624
            +KVL  IVDAKAAA+ DS  T  KKAD AA+ + MG   +  G ARCGPGA+ATSF +AV AD  A+     +S A +   ASGR S  ++ GGA            RP   +  XXXXXXXXXXXXXXXX            +  VPPLG DL   M + +I  LA     T EEAD FLN GFT D +   +A A M  +L  +   +R    V D M        ++PG D     ++ KL + YG    DF +  ++  + +GW ++   P   K    TKR+A +L+ G                P  + +G A     +  LG +   +   GNRG K R  TN L +DG+  FM  Q   A  +A  +
Sbjct:   54 DKVLTAIVDAKAAARHDSEETEQKKADEAASHSAMGMWAINQGKARCGPGAKATSFQEAVAADNIALGS---RSGAVDGGRASGRVSPASSIGGA------------RPASEASAXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLG-DLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTADEVQPERAVAKMTVLLDKRRSLQRDGDSVQDSMDDLGEEDMQLPGFDRFDESVMFKLLEPYGVEMMDFRSLPESNWFHSGWPIERVTPD--KVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGPATVGGARAMSGMDPLGAASGPS---GNRGRKPRAKTNYLAKDGLDSFMERQAADARALADQK 407          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX39_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.940e-26
Identity = 122/340 (35.88%), Postives = 163/340 (47.94%), Query Frame = 2
Query:  593 AKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGRSGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXTLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGWLDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGI 1570
            AKAAA+QDS  T+ KKAD A   + MG   +  GNARCGPGA+ATSF +AV AD  A+   ++ +AA   ASGR        +P                 XXXXXXXXXXX               +  VPPLG +L   M + SI  LA     T EEAD FLN GFT D +   +A A M  +L  +L  +R    V DYM        ++PG D     ++ KL + YG    DF +  ++  + +GW  E   +  K    TKR+A +L+ G                P S+ +G A    A+  +  S  ++   GNRG K R  TN+L EDG+
Sbjct:   43 AKAAARQDSEETKQKKADEAVWHSAMGMWAINQGNARCGPGAKATSFEEAVAADNIALGS-RSGAAAGGRASGRV-------SPASSIGWARPASEXXXXXXXXXXXXXXXXTGGLDDDLSPAGSGPSRKVPPLG-ELVKHMGSLSIPTLAQSAGITTEEADFFLNTGFTADEVQPERAVATMTVLLDKRLSLQRDGDSVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIEQRVTPDKLLQITKRVARLLVLGAGVTNSGLSAADQTSIPGSATVGGAR---AMSGMDPSGTASGPSGNRGRKPRAKTNKLAEDGL 370          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KF37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF37_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 4.560e-21
Identity = 111/253 (43.87%), Postives = 141/253 (55.73%), Query Frame = 2
Query:  566 EKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGR-SGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDF 1300
            +KVL  IVDAKAAA+QDS  T+ KKAD AA+ + MG   +  GNARCGPGA+ATSF +AV A+  A+   ++ +AA   ASGR S  ++ GG             RP   +XXXXXXXXXXXXXXXXXX            +  VPPLG +L   M + SI  LA     T EEAD FLN GFT ++ P  +A AM   +L  +L  +R    V DYM        ++PG D     ++ KL + YG    DF
Sbjct:  184 DKVLTAIVDAKAAARQDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFEEAVAANNIALGS-RSGAAAGGRASGRVSPASSIGGV------------RPASEAXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLG-ELVKHMGSLSIPTLAQSAGVTTEEADYFLNTGFTVEVQPE-RAVAMTTVLLDKRLSLQRDGDSVQDYMDGLGEEDMQLPGFDRFDESVMVKLLELYGVEMMDF 421          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KDK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.740e-19
Identity = 84/242 (34.71%), Postives = 111/242 (45.87%), Query Frame = 2
Query:  983 VPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKIASSRMAAEEKEEKNREW 1663
            VPPLG DL   M + +I  LA     T EEAD FLN GFT D +   +A AMMV +L  +LC +R    V  YM        E+PG DG    ++ KL +  G    DF++  DA  +  GW +D   P   K    TKR+A +L+ G                P S+ +G    A A+         +   GNRG K R  T +L EDG+  FM  Q+  A  +A  R     +EE  R W
Sbjct:   21 VPPLG-DLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELSGVEKMDFHSLPDANWFHGGWPIDRVTPD--KVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGG---AHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLADQR-----REEDERRW 251          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5K579_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K579_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 6.200e-19
Identity = 144/441 (32.65%), Postives = 193/441 (43.76%), Query Frame = 2
Query:  563 QEKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVM----------------------ADERAMADAQAKSAAAETASGR-SGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGN------DLALEMLAPSI-------TDLATQTTS-----------------------------------TNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGLLLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPV-----------APASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKIASSR 1624
            ++KVL  IVDAKAAA+ DS  T+ KKAD AA+ + MG   +  GNARCGPGA+ATSF +A                        AD  A+   ++ +AA   ASGR S  ++ GGA            RP    XXXXXXXXXXXXXXXXXX            +  VPPLG+       L + MLA S        T   T                                       T EEAD FLN GFT D +   +A AMMV +L  +LC +R    V  +              D  ++ KL + YG    DF +  ++ R+ +GW ++   P   K    TKR+A +L+ G                P S+ +GDA    A+  +  S  ++   GNRG K R  TN+L EDG+  F+  Q+  A  +A  +
Sbjct:  241 KDKVLTAIVDAKAAARHDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFQEAXXXXXXXXXXXXXXXXXXXXXXXAADNNALGY-RSGAAAGGRASGRVSPASSIGGA------------RPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGADYFLDTGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQF--------------DESVMFKLLELYGMETMDFRSLPESNRFHSGWPIERVTPD--KVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATVGDAR---AMSGMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFIERQVADARALADQK 649          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: D7FZ43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ43_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 8.990e-19
Identity = 129/355 (36.34%), Postives = 173/355 (48.73%), Query Frame = 2
Query:  668 MGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGR-SGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX----TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASF-EGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPPPVAPASSNIGD--------AAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKIASS-------RMAAEEKEEKNR 1657
            MG   +  GNARCGPGA+ATS  +AV AD  A    ++ +AA   ASGR S  ++ GGA            RP    XXXXXXXXXXXXXXXXXX            +  VPPLG  L   M + SI  LA     T EEAD FL AGFT D +   +  AMM  +L  +   +R    V+DY+    +   +++PG+DG+   ++  L D YG     F +  D+  +  G  ++   P   +    TKR+A +L+ G        S  G         A  A A+  +  SR ++   GNRG K R  TN+L E+G+  FM  Q+  A+K+A         R AAE K E  R
Sbjct:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGS-RSGAAAGGRASGRVSPVSSIGGA------------RPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGG-LVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKVQV---TKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGR 338          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5KK82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK82_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.030e-18
Identity = 128/305 (41.97%), Postives = 163/305 (53.44%), Query Frame = 2
Query:  566 EKVLNTIVDAKAAAKQDSAATRHKKADAAANTTFMGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAA------ETASGRSGQTTAGGAPXXXXXXXXEDGRPGRSSXXXXXXXXXXXXXXXXXXXXXXXXXX---TLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASF-------EG----SRSEVPGLD--GLLLRKLCDHYGASCEDFYTSDDAYRYANGWLDECAPSAAKFKTQTKRLAEVLIPG 1414
            EK+L  +VDAKAA +  S   + +KA        +G+  +  GN+RCGPGA ATSFG+A  +DER M                ++ SG           XXXXXXXX    P  + XXXXXXXXXXXXXXXXXXXXXXXXXX    + VPPLG  LA  + AP+I  LA++   T E+ADLFLNAGF  D +P   AT MM  V+ G L   R +  V+ ++          +G    + ++VPGLD  G L   L  +Y      F     AY+Y +GWL E  PS   F   T+ LA  L+ G
Sbjct:  261 EKLLIAVVDAKAAERAGSQQEKARKA----GQNLLGQAAIDMGNSRCGPGATATSFGEAHASDERRMEGVNRTKGRMPGFTQPDSRSGXXXXXXXXXXXXXXXXXXXXRSSPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIPVPPLGGALANLLRAPTIERLASKANVTPEQADLFLNAGFRPDQIPYDVATRMMETVIAGYLSALRGNQSVETFVKEVIEADEDADGFQPVATTKVPGLDRAGDLTNALFVNYKQDFNAFGILPKAYKYRSGWLVEEGPSDKVFDGLTRALAARLVSG 561          
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Match: A0A6H5K5U8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U8_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.410e-18
Identity = 78/220 (35.45%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  983 VPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLPRHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGL---LLRKLCDHYGASCEDFYTSDDAYRYANGW-LDECAPSAAKFKTQTKRLAEVLIPGPP------PVAPASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDGIQGFMREQLQAAEKI 1612
            VPPLG DL   M + +I  LA     T EEAD FLN GFT D +   +A AMM  +L  +L  +R   +V DYM        ++PG D     ++ KL + YG    DF++  DA  +  GW +D   P   K    TKR+A +L+ G          A  +S  G A    A+  +  S  ++   GNRG K R  TN+L EDG+  FM  Q+  A  +
Sbjct:  344 VPPLG-DLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMTVLLDKRLSHQRDGDNVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPD--KVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVXRAMSGMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFMERQVADARSL 560          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXD3_9PHAE3.050e-3238.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4P2_9PHAE3.770e-3240.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRQ2_9PHAE2.600e-2636.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX39_9PHAE5.940e-2635.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF37_9PHAE4.560e-2143.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK9_9PHAE1.740e-1934.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K579_9PHAE6.200e-1932.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ43_ECTSI8.990e-1936.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK82_9PHAE3.030e-1841.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5U8_9PHAE3.410e-1835.45Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig893contigP-littoralis_Contig893:9142..11306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1928
Hectar predicted targeting categoryother localisation
Exons2
Cds size1488
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791782.0388193-UTR-P-littoralis_Contig893:9141..92141680791782.0388193-UTR-P-littoralis_Contig893:9141..9214Pylaiella littoralis U1_48UTRP-littoralis_Contig893 9142..9214 -
1680791782.083926-UTR-P-littoralis_Contig893:10939..113061680791782.083926-UTR-P-littoralis_Contig893:10939..11306Pylaiella littoralis U1_48UTRP-littoralis_Contig893 10940..11306 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791782.0593936-CDS-P-littoralis_Contig893:9214..94941680791782.0593936-CDS-P-littoralis_Contig893:9214..9494Pylaiella littoralis U1_48CDSP-littoralis_Contig893 9215..9494 -
1680791782.0737157-CDS-P-littoralis_Contig893:9731..109391680791782.0737157-CDS-P-littoralis_Contig893:9731..10939Pylaiella littoralis U1_48CDSP-littoralis_Contig893 9732..10939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig893.1.4prot_P-littoralis_Contig893.1.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig893 9215..10939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig893.1.4

>prot_P-littoralis_Contig893.1.4 ID=prot_P-littoralis_Contig893.1.4|Name=mRNA_P-littoralis_Contig893.1.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=496bp
MSWTVCRWLQASTSKLREVAENNIVLRVLTTCQQCVSDRFGLWVLLMLPP
HRRIRLTVVFSRAIAQEKVLNTIVDAKAAAKQDSAATRHKKADAAANTTF
MGRLQVAHGNARCGPGARATSFGDAVMADERAMADAQAKSAAAETASGRS
GQTTAGGAPSGRSSPTTEDGRPGRSSGRSSPSSGGGPSEGSSGRSSPSPG
GGTLSVPPLGNDLALEMLAPSITDLATQTTSTNEEADLFLNAGFTYDLLP
RHKATAMMVRVLQGKLCDERADMDVDDYMASFEGSRSEVPGLDGLLLRKL
CDHYGASCEDFYTSDDAYRYANGWLDECAPSAAKFKTQTKRLAEVLIPGP
PPVAPASSNIGDAAPADAIISLGFSRKSNDGIGNRGTKARKNTNRLEEDG
IQGFMREQLQAAEKIASSRMAAEEKEEKNREWMVAQLEHDRKLRQDEFEH
QRKIRADERDAERAERKDERAHQLELLSLQLKLVHAQNQGQGQGR*
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mRNA from alignment at P-littoralis_Contig893:9142..11306-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig893.1.4 ID=mRNA_P-littoralis_Contig893.1.4|Name=mRNA_P-littoralis_Contig893.1.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2165bp|location=Sequence derived from alignment at P-littoralis_Contig893:9142..11306- (Pylaiella littoralis U1_48)
AAGCTGAAAAAAAATCAGTTTTCAGCTTTGGCGGCCTGACACGACTCCCA AATCTGAAAACCGATTTTTTTTTTCAGCTTTCAGAGCGTTTGAACCCCCG TTCCTCGGAACGATCCTCATATCGGGTTAATTCCTATGCCGAAAACTGAA AAAAACTGAAAACCGAAAAAAAAAAATCGAGTCCGAAACTGTATATTTTC TGGGTGGTCGTCATCGTTTCCATGTGGGATTTACAGCTTCTGTTTGGTAT AAAGTGGTTCCACGGCCGGGTGCGGTCCGCTGTCCCCCCCCCCCCTGTAC CCTCCACTGGGTTGACGATTGACTTCAACGGTAGTTTGTCTTTCCATTGC GAGGGAATCGGACCGCCATGAGCTGGACGGTCTGTCGTTGGCTTCAAGCT TCTACCAGTAAATTACGCGAAGTGGCTGAGAATAATATCGTCTTGCGAGT TCTCACTACATGTCAACAATGCGTTTCAGACAGATTCGGTTTGTGGGTCC TTCTAATGCTGCCGCCTCACCGTCGTATTCGCCTCACCGTCGTATTCTCG CGTGCAATTGCACAGGAGAAAGTCCTCAACACCATCGTCGACGCCAAGGC TGCTGCTAAACAAGACTCGGCGGCGACGAGGCACAAGAAGGCTGACGCCG CCGCCAACACCACGTTCATGGGTAGGCTACAGGTGGCCCACGGCAACGCC CGTTGCGGGCCCGGTGCGAGGGCTACGTCGTTCGGAGATGCTGTGATGGC AGACGAGCGAGCAATGGCCGATGCCCAGGCGAAGTCCGCTGCTGCAGAGA CGGCCAGCGGCCGCTCGGGCCAGACGACGGCGGGTGGCGCCCCCAGCGGC AGGTCGAGCCCGACGACAGAAGACGGCCGCCCCGGCAGGTCCAGCGGCAG GTCGAGCCCGTCGTCGGGAGGCGGCCCCTCCGAAGGCTCCAGCGGAAGGT CGAGCCCGTCGCCGGGAGGCGGCACCCTTTCGGTTCCGCCGCTTGGAAAC GACCTCGCCCTGGAAATGCTGGCGCCGTCCATCACCGACCTTGCCACGCA AACCACGTCGACCAACGAGGAGGCGGATCTATTCCTCAACGCTGGCTTCA CGTACGACTTGCTCCCTCGCCACAAGGCCACGGCCATGATGGTGCGCGTG CTGCAGGGAAAACTTTGCGACGAACGAGCTGACATGGACGTGGACGACTA CATGGCGAGCTTCGAAGGAAGCCGCTCCGAAGTGCCCGGGCTGGACGGGC TCCTCCTGCGGAAACTTTGCGACCACTACGGGGCGTCATGCGAAGACTTC TACACCAGCGACGATGCCTATAGGTACGCCAACGGATGGCTTGACGAGTG CGCCCCCTCGGCGGCGAAGTTCAAAACCCAGACAAAGCGGCTGGCGGAGG TGCTGATACCAGGCCCTCCCCCCGTCGCACCGGCCTCTTCGAACATCGGC GATGCGGCGCCTGCGGACGCAATCATCAGCCTCGGATTTTCCCGCAAGAG CAATGATGGTATAGGCAACCGCGGGACGAAGGCTCGGAAGAACACCAACA GGCTCGAGGAGGACGGGATTCAGGGGTAAGGACTCACGCGGGCCGGAGAA GTTTGGTGCAGCGCCTTTTTGTACGCTTTTTTTTCTTTTTTTTCTTTAAT GATTCTGGCAGTGTTCGTGGCTTTTGTCGTAAAAACTCTCTCGTACTTTG GCCGTTTTGCTTGCAGCTTAGTCTATAGCACGATGTGTTGCGCCTCCTGA GACTGTACCCTCCATTCCCTCGCCCCCCGTCCGTTCCGGCACCCTTATGC CCCGCGTTGCAGCTTCATGCGGGAACAGCTACAGGCCGCTGAGAAGATCG CTTCTTCGAGAATGGCAGCCGAGGAGAAGGAGGAGAAGAACAGGGAGTGG ATGGTCGCCCAGTTGGAACACGACAGAAAGCTGAGGCAGGACGAGTTCGA GCATCAAAGGAAGATTCGTGCGGACGAACGCGATGCGGAGAGAGCCGAGA GGAAGGATGAGCGGGCTCATCAGCTGGAATTGCTTTCACTACAACTGAAG CTCGTCCACGCCCAAAACCAAGGCCAAGGTCAGGGTCGCTAGTATATCCG GCGGTACTTTGTTGTAGACCTCTCTCTCTACTTTTTCGGAACGAGCAGTC GTCTGTCTTGCGCGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig893:9142..11306-

>mRNA_P-littoralis_Contig893.1.4 ID=mRNA_P-littoralis_Contig893.1.4|Name=mRNA_P-littoralis_Contig893.1.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1488bp|location=Sequence derived from alignment at P-littoralis_Contig893:9142..11306- (Pylaiella littoralis U1_48)
ATGAGCTGGACGGTCTGTCGTTGGCTTCAAGCTTCTACCAGTAAATTACG
CGAAGTGGCTGAGAATAATATCGTCTTGCGAGTTCTCACTACATGTCAAC
AATGCGTTTCAGACAGATTCGGTTTGTGGGTCCTTCTAATGCTGCCGCCT
CACCGTCGTATTCGCCTCACCGTCGTATTCTCGCGTGCAATTGCACAGGA
GAAAGTCCTCAACACCATCGTCGACGCCAAGGCTGCTGCTAAACAAGACT
CGGCGGCGACGAGGCACAAGAAGGCTGACGCCGCCGCCAACACCACGTTC
ATGGGTAGGCTACAGGTGGCCCACGGCAACGCCCGTTGCGGGCCCGGTGC
GAGGGCTACGTCGTTCGGAGATGCTGTGATGGCAGACGAGCGAGCAATGG
CCGATGCCCAGGCGAAGTCCGCTGCTGCAGAGACGGCCAGCGGCCGCTCG
GGCCAGACGACGGCGGGTGGCGCCCCCAGCGGCAGGTCGAGCCCGACGAC
AGAAGACGGCCGCCCCGGCAGGTCCAGCGGCAGGTCGAGCCCGTCGTCGG
GAGGCGGCCCCTCCGAAGGCTCCAGCGGAAGGTCGAGCCCGTCGCCGGGA
GGCGGCACCCTTTCGGTTCCGCCGCTTGGAAACGACCTCGCCCTGGAAAT
GCTGGCGCCGTCCATCACCGACCTTGCCACGCAAACCACGTCGACCAACG
AGGAGGCGGATCTATTCCTCAACGCTGGCTTCACGTACGACTTGCTCCCT
CGCCACAAGGCCACGGCCATGATGGTGCGCGTGCTGCAGGGAAAACTTTG
CGACGAACGAGCTGACATGGACGTGGACGACTACATGGCGAGCTTCGAAG
GAAGCCGCTCCGAAGTGCCCGGGCTGGACGGGCTCCTCCTGCGGAAACTT
TGCGACCACTACGGGGCGTCATGCGAAGACTTCTACACCAGCGACGATGC
CTATAGGTACGCCAACGGATGGCTTGACGAGTGCGCCCCCTCGGCGGCGA
AGTTCAAAACCCAGACAAAGCGGCTGGCGGAGGTGCTGATACCAGGCCCT
CCCCCCGTCGCACCGGCCTCTTCGAACATCGGCGATGCGGCGCCTGCGGA
CGCAATCATCAGCCTCGGATTTTCCCGCAAGAGCAATGATGGTATAGGCA
ACCGCGGGACGAAGGCTCGGAAGAACACCAACAGGCTCGAGGAGGACGGG
ATTCAGGGCTTCATGCGGGAACAGCTACAGGCCGCTGAGAAGATCGCTTC
TTCGAGAATGGCAGCCGAGGAGAAGGAGGAGAAGAACAGGGAGTGGATGG
TCGCCCAGTTGGAACACGACAGAAAGCTGAGGCAGGACGAGTTCGAGCAT
CAAAGGAAGATTCGTGCGGACGAACGCGATGCGGAGAGAGCCGAGAGGAA
GGATGAGCGGGCTCATCAGCTGGAATTGCTTTCACTACAACTGAAGCTCG
TCCACGCCCAAAACCAAGGCCAAGGTCAGGGTCGCTAG
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