mRNA_P-littoralis_Contig87.33.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig87.33.1
Unique NamemRNA_P-littoralis_Contig87.33.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 565 bits (1457), Expect = 1.080e-198
Identity = 310/411 (75.43%), Postives = 321/411 (78.10%), Query Frame = 1
Query:    1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
            MPSTLSKASGSVERA ATTDIDRR GDT+ TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHHSVYH+           G+   +                                                         LRANANPLLSAYGSLPL  AVYNGHLKVV ELV+WYGTDRCT+DGG LAL TAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLL R GGN N  TRAYVNM HGTLPE YD+FVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDE FIGTPLE+ATSY RRFSPMRVHREMVRGLKGVIRLLRQEEAVH+VSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAA+SR
Sbjct:    1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 411          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 550 bits (1417), Expect = 4.620e-187
Identity = 301/411 (73.24%), Postives = 317/411 (77.13%), Query Frame = 1
Query:    1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
            MPSTLSKASGS +   ATTDIDRR G T+QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHH+VYHK     +                                                                      ANANPLLSAYGSLPL MAVY+GHL+VVRELV+WYGTDRCTSDGGALAL TAASRKHVDIV FLC+AGVVDTEGVALCAAIEGCSEACV LLL R GGNANTGTRAYVNMDHGTLPE Y+EFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY+RRFS M+VHREMVRGLKGVIRLL+QEEAVHSVSWTWPIDTGRS ER SRKKSTSIARM+PLLKRRAA  RVLLAA+SR
Sbjct:  422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSRKKSTSIARMVPLLKRRAATLRVLLAAMSR 832          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 489 bits (1260), Expect = 2.020e-168
Identity = 291/459 (63.40%), Postives = 299/459 (65.14%), Query Frame = 1
Query:    1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLH-MAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAI-----------------------------------------------EGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
            MPSTLSKASGS +   ATTDIDRR GDT+QTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHH+VYHK     +                                                                            LSAYGSLPL+ M          RELVYWYG DRCTSDGGALALVTAASRKHVDIVTFL DAGVVDTEGVALCAAI                                               EGCSEACV LLL R GGNANTGTRAYVNMDHGTLPE YDEFVFQETPLVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY RRFS M VHREMV  LKGVIRLLRQEEAVHSVSWTWPID GRSVERASRKK TSIARM+PLLKRRAAKPRVLLAALSR
Sbjct:    7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSR 465          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 8.840e-166
Identity = 289/437 (66.13%), Postives = 300/437 (68.65%), Query Frame = 1
Query:   25 SGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGA-KG---------------------------------KLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
            SGSVER  ATTDIDRR GDT+QTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHH+VYHK                      +     G D    PG  G D               TP+   A KG                                              NPLLSA                   ELVYWYGTD CTSDGGALAL TAASR  VDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLL R G  A+T +RAYVNMDHG+LPE YDEFVFQE PLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY RRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAA+SR
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHK-----------------HLAVSKDLIEAGADLDARPG--GID---------------TPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 801          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.550e-77
Identity = 181/381 (47.51%), Postives = 218/381 (57.22%), Query Frame = 1
Query:  103 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARW-HRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYG--SLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFI-GTPLEVATSYIRRFSPMRVHREMVR-GLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
            VAS +G  RVVR LLR GA VS AD+DG TALH S+ +K     +   + G+    EAR  H      G      P +  A +   +G           I  G KG +GA        ANP+L+AY   SLPL +A  NG L VVREL   +G D C+ DGGA ALV AAS+  VDIVTFL D GVVD EG+ALCAA+EG  E C+ LLL   G NAN   RAY NM H T    Y   +F +TPLVS F LG F++PR  RLLL AGAD  S VR+    +G E +  +  TPL +A S +  +       E V  GLKGVIRLL+Q +AVH+ SW WP         ++ +KST I RMLP LKRRA KPRV LA LSR
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGAD--LEARIDHHQALGVG----CTPLHVAAAKGFHKG-------MVMLIHAGVKGFVGA-------KANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWP---------SALEKSTPIVRMLPGLKRRATKPRVALAPLSR 384          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 5.030e-63
Identity = 165/430 (38.37%), Postives = 217/430 (50.47%), Query Frame = 1
Query:   22 ASGSVERAT-----ATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTS----------------CGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRR----FSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSRCV 1236
            +SGSVER         T+IDRR  +   T LM A+  G  R+VR LLR GA VSV+  DG+TALH ++  +     +   + G+   ++A   R  +                 C     ++      D R  +G       S         G L AV +L +  ANPLL    + PL +A + GHL VV+ELV  +G D C  +G   AL TAA   H  I+TFL DAGV+DT+G ALC AIEG +EAC++LL+ R GG+ +   R Y N+D+            +E PL+  F  G  HAPR  R LL+ GAD  + VRF  +  GE     I  PL  A   +R     F    V R  V GLKGV+RLL+QE AVH+ SW WP DT R+         T I R  P+  R  ++P VLLAA+ RCV
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDG-------STAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGE----MIDEPLVAAKITLRHEQTYFKDADVDR--VDGLKGVVRLLQQEAAVHANSWAWPTDTDRA---------TKIVRK-PI--RPGSRPEVLLAAMGRCV 419          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.720e-57
Identity = 168/448 (37.50%), Postives = 207/448 (46.21%), Query Frame = 1
Query:    1 MPSTLSKA-----SGSVER-----ATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKT----------------------PGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMRVH---REMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLK-RRAAKPRVLLAALSRCV 1236
            MPST S       +GSVER     +   T+IDRR  +   T LM A+  G  R+VR LLR GA VSV+  DG+                                 P +E +    G  P   A    +   C     ++      D R   G       S         G L AV++LL+  ANP+L    + PL +A + GHL VV+ELV  +G D C+ +G   AL TAA   H  I+TFL DAGV DT+G ALC AIEG SEAC++LL+ R GGNA+     Y N D              +  LV  F  G  +APR  R LL+ GAD    VRF     GE      G PL VA   I R           E V GLK V+RLLRQE+AVH+ SW WPIDT R+         T I R  P  K     +P VLLAA+ RCV
Sbjct:    1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQ---GQTPLHLATGEGF---CDGMVALIDAGANVDSRMSNG-------STAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKGLGE----IAGGPL-VAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRA---------TKIVRKTPAFKIHPGPRPCVLLAAMGRCV 410          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.110e-39
Identity = 103/190 (54.21%), Postives = 115/190 (60.53%), Query Frame = 1
Query:    1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHK---------TPGREQIPDRGGSGP*SEARWHRYTTS--CGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVREL 537
            MPSTLSKASGS++   ATT IDR  GDT+QTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHHSVYH            G +     GG     +   H   T   C   + ++      D R  +G  P            + G+L AVRVLLRANANPLLSA GSLPL+MAVYN  L   R L
Sbjct:    1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGK----DTPLHVAATKGFCQGMKLLM------DSRLDDGATPL-------FLAASDGRLEAVRVLLRANANPLLSACGSLPLYMAVYNRPLVRNRSL 173          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.100e-20
Identity = 93/269 (34.57%), Postives = 133/269 (49.44%), Query Frame = 1
Query:  445 RANANPLLS----AYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSD-GGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHA--PRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMR--VHREMVRGLKGVIRLLRQEEAVHSVSWTWP-------IDTGRSVERASRKKSTSIARM---LPLLKRRA 1194
            RA ANPLL+    A+  LPL  A  NG L VV EL+  +G   C    GG  AL  AA + H+D++  L  AGVVDT G+AL  A        V+ LL++  G  +  + AYV+                 TPL+   ++G   +  P+  RLL++AGAD TS VRF            + TPL +AT  +R     R  +  E++R L+ + RLL + EAVH+ SW W        +  G +    +   ST+  ++   LP+L+RRA
Sbjct:  168 RAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGTPSEKS-AYVSRPRDPCGR---------TPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLP---VVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRA 422          
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.080e-19
Identity = 100/287 (34.84%), Postives = 131/287 (45.64%), Query Frame = 1
Query:  382 RSHTPIRCGA-KGKLGAVRVLLRANANPLL------SAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGAL--ALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTF--NLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTG-----RSVERASRKKSTSIARMLPLLKRRA 1194
            R+ TP+   A +G LGAV+VLL A ANPLL      S    +PL +A   G   VVREL+  +G   C    G L  AL  AA    VDI++ +  AGVVD  G+AL AA+    EA V  LL +      T   +YVN        A D+     T L+ +F  N      PR  R L++AGAD TS V+   +           TPLE      RR                   +L Q  AVH+VSW WP D        +  R ++   T ++ ML +L+RRA
Sbjct:   11 RTATPLYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERWQT---SYVNT-------ACDDDGL--TALLWSFGGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTR---VNMTPLEYVNEATRR-------------------VLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRA 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JHQ8_9PHAE1.080e-19875.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE4.620e-18773.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE2.020e-16863.40Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE8.840e-16666.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE1.550e-7747.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE5.030e-6338.37Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LP44_ECTSI4.720e-5737.50EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LH66_ECTSI1.110e-3954.21EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVK3_ECTSI1.100e-2034.57EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KEI1_9PHAE1.080e-1934.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:80755..81990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog654926.Q8QNQ8_ESV1K
Model size1236
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010941,GO:0016032,GO:0019048,GO:0019050,GO:0019054,GO:0033668,GO:0035821,GO:0039526,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044531,GO:0044532,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0060548,GO:0065007
Exons1
Evalue1.29e-49
EggNOG OGs4QB1T@10239|Viruses,4QUVA@35237|dsDNA viruses no RNA stage
Descriptionaspartic-type endopeptidase activity
Cds size741
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791743.6036277-UTR-P-littoralis_Contig87:80754..812491680791743.6036277-UTR-P-littoralis_Contig87:80754..81249Pylaiella littoralis U1_48UTRP-littoralis_Contig87 80755..81249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791743.6159232-CDS-P-littoralis_Contig87:81249..819901680791743.6159232-CDS-P-littoralis_Contig87:81249..81990Pylaiella littoralis U1_48CDSP-littoralis_Contig87 81250..81990 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.33.1prot_P-littoralis_Contig87.33.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig87 81250..81990 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig87.33.1

>prot_P-littoralis_Contig87.33.1 ID=prot_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
MAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDA
GVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPE
AYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGE
EDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVS
WTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSRCV
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mRNA from alignment at P-littoralis_Contig87:80755..81990+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig87.33.1 ID=mRNA_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1236bp|location=Sequence derived from alignment at P-littoralis_Contig87:80755..81990+ (Pylaiella littoralis U1_48)
ATGCCATCAACTCTGAGCAAAGCCAGCGGTTCCGTCGAGCGTGCGACTGC TACGACCGACATCGACCGACGCCGTGGTGATACGAGCCAGACACCGCTGA TGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTTAGAGACCTTCTGCGG CAGGGTGCCAGCGTCTCGGTAGCGGACAGCGACGGTTATACTGCTCTGCA CCATTCGGTTTATCACAAAACACCTGGCCGTGAGCAAATACCTGATCGAG GCGGGAGCGGACCTTGAAGCGAGGCCCGGTGGCATAGATACACCACTTCA TGTGGCCGCGACGAAAGGGTTTTACCAGGGAATGGTGGTGCTGATCGACG CAGGCGCGAAGGTGGACAGCCGGCCCGAAGACGGAGCCACACCCCTATAC GTTGCGGCGCAAAAGGGAAATTGGGTGCCGTCAGAGTTCTCCTTCGGGCG AACGCGAATCCGCTCTTGTCAGCGTACGGAAGTCTGCCGTTACATATGGC GGTTTACAATGGACACCTGAAAGTGGTCCGCGAGCTTGTGTATTGGTACG GAACCGACCGCTGTACAAGCGACGGTGGCGCACTGGCTCTCGTGACGGCC GCTTCTCGCAAACACGTGGACATCGTCACCTTCCTGTGCGATGCCGGTGT GGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATTGAGGGATGTAGCG AGGCGTGTGTCAGGCTTCTTTTGGAGAGACTGGGGGGAAATGCCAACACA GGTACGCGTGCCTACGTCAATATGGACCACGGTACTCTCCCGGAAGCCTA TGACGAATTCGTGTTCCAAGAAACACCGCTGGTGAGCACATTCAATCTGG GAAGCTTTCACGCTCCCAGATTCGCGCGCTTGCTACTTGAAGCCGGGGCG GACGCGACATCGGGCGTTCGGTTTCCATGCGACAGTGATGGGGAAGAAGA CGAAGGGTTCATCGGCACGCCCCTGGAAGTAGCCACATCCTATATTCGTA GATTTAGTCCAATGCGAGTCCACCGCGAGATGGTGCGGGGGCTGAAGGGT GTCATCCGCCTGCTGCGACAGGAGGAGGCAGTTCACTCGGTGTCCTGGAC GTGGCCAATCGACACCGGTCGTTCTGTAGAGCGTGCGTCCCGGAAGAAAT CAACATCGATCGCTCGCATGCTCCCGCTTCTGAAGCGGAGGGCGGCGAAG CCTCGTGTGCTCTTGGCGGCCCTGTCTAGGTGCGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig87:80755..81990+

>mRNA_P-littoralis_Contig87.33.1 ID=mRNA_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig87:80755..81990+ (Pylaiella littoralis U1_48)
ATGGCGGTTTACAATGGACACCTGAAAGTGGTCCGCGAGCTTGTGTATTG
GTACGGAACCGACCGCTGTACAAGCGACGGTGGCGCACTGGCTCTCGTGA
CGGCCGCTTCTCGCAAACACGTGGACATCGTCACCTTCCTGTGCGATGCC
GGTGTGGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATTGAGGGATG
TAGCGAGGCGTGTGTCAGGCTTCTTTTGGAGAGACTGGGGGGAAATGCCA
ACACAGGTACGCGTGCCTACGTCAATATGGACCACGGTACTCTCCCGGAA
GCCTATGACGAATTCGTGTTCCAAGAAACACCGCTGGTGAGCACATTCAA
TCTGGGAAGCTTTCACGCTCCCAGATTCGCGCGCTTGCTACTTGAAGCCG
GGGCGGACGCGACATCGGGCGTTCGGTTTCCATGCGACAGTGATGGGGAA
GAAGACGAAGGGTTCATCGGCACGCCCCTGGAAGTAGCCACATCCTATAT
TCGTAGATTTAGTCCAATGCGAGTCCACCGCGAGATGGTGCGGGGGCTGA
AGGGTGTCATCCGCCTGCTGCGACAGGAGGAGGCAGTTCACTCGGTGTCC
TGGACGTGGCCAATCGACACCGGTCGTTCTGTAGAGCGTGCGTCCCGGAA
GAAATCAACATCGATCGCTCGCATGCTCCCGCTTCTGAAGCGGAGGGCGG
CGAAGCCTCGTGTGCTCTTGGCGGCCCTGTCTAGGTGCGTG
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