mRNA_P-littoralis_Contig87.114.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A6H5JFB7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB7_9PHAE) HSP 1 Score: 232 bits (591), Expect = 1.160e-75 Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 1
Query: 4 HTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFAT-RFLIDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSAL 354
HTRANG RCRNRVCFGSPVCWLHNCIKYGV+IKDSTIP AGKGLFAT R DSWICPYSGEPTTMNCIHQRYPGAMTAAYTE+IPGPANL FDCACSRGVGSLANARFNADGKVSAL
Sbjct: 29 HTRANGTRCRNRVCFGSPVCWLHNCIKYGVEIKDSTIPGAGKGLFATTRLPKDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEKIPGPANLAFDCACSRGVGSLANARFNADGKVSAL 146
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: Q8QNC4_ESV1K (EsV-1-158 n=2 Tax=root TaxID=1 RepID=Q8QNC4_ESV1K) HSP 1 Score: 194 bits (493), Expect = 8.710e-61 Identity = 92/119 (77.31%), Postives = 103/119 (86.55%), Query Frame = 1
Query: 4 HTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATRFLI-DSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSALR 357
HTR +G+RC+NRVCFGSPVCW+HN KYGVKIKDSTIP AGKGLFATR + DSWICPYSGE TTMNCIHQRYP TAAYTEQ+ ANL +DCACSRG+GSLANA+FN++G VSALR
Sbjct: 29 HTRDDGLRCKNRVCFGSPVCWVHNARKYGVKIKDSTIPGAGKGLFATRKIPRDSWICPYSGEATTMNCIHQRYPEGETAAYTEQVQ--ANLAYDCACSRGIGSLANAQFNSNGTVSALR 145
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: B5LWM5_9PHYC (Putative lysine methyltransferase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM5_9PHYC) HSP 1 Score: 176 bits (447), Expect = 8.700e-54 Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 1
Query: 7 TRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATRFLI-DSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSALR 357
TR NG+RC+NRVCFG P+CW+HN K+GVKIK STIP AGKGLFATR + ++WICPYSGE TTM CIHQRYPG TA Y E+I N+ +DCACSRG+GSLAN RFNA+GKVS++R
Sbjct: 31 TRPNGLRCKNRVCFGFPLCWIHNSQKFGVKIKQSTIPGAGKGLFATRQIPKNTWICPYSGEETTMECIHQRYPGDSTAPYAEKISD--NIAYDCACSRGIGSLANGRFNANGKVSSVR 146
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A6H5JAG7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG7_9PHAE) HSP 1 Score: 161 bits (408), Expect = 7.370e-48 Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 10 RANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATR-FLIDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSAL 354
RANG+RC+NRVCFG+P+C +HN +KYGVK K STI AGKGLFATR F +SWICPY GE T+ +CI +RYPG MTAAY E +PGP L D AC RGV SLAN FNA+G VS+L
Sbjct: 31 RANGMRCKNRVCFGTPLCHVHNSLKYGVKAKTSTIVNAGKGLFATRAFPKNSWICPYLGEKTSKDCIQKRYPGDMTAAYAEILPGPEQLHIDSACKRGVASLANGLFNANGSVSSL 146
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: Q6XLV1_9PHYC (FirrV-1-G2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLV1_9PHYC) HSP 1 Score: 132 bits (332), Expect = 4.070e-36 Identity = 67/123 (54.47%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 1 AHTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATR-FLIDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIP---GPANLGFDCACSRGVGSLANARFNADGKVSALR 357
A+ R NG +C+ RVC G P CW+H +GV +K STIP AGKGLFATR F ++WICPY GE NC QRYPG TA Y E +P P D AC+R VGSLAN +F DG VS+LR
Sbjct: 40 AYVRPNGEQCKKRVCVGHPFCWIHVRAAFGVTVKTSTIPNAGKGLFATRDFKKNTWICPYFGEIIDANCFVQRYPGKATAPYAEMLPLNTTPRKY-VDSACTRSVGSLANGKFKGDGSVSSLR 161
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A6H5J8Q0_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Q0_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.920e-26 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 106 STIPEAGKGLFATR-FLIDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSAL 354
+ + AGKGLFATR F +SWICPY GE T+ +CI +RYPG MTAAY E +PGP L D AC RGV SL+N FNA+G VS+L
Sbjct: 24 TVLVNAGKGLFATRAFPKNSWICPYLGEKTSKDCIQKRYPGDMTAAYAEMLPGPEQLHIDSACKRGVASLSNGLFNANGSVSSL 107
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A7C3YXR9_9BACT (SET domain-containing protein n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7C3YXR9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 5.650e-11 Identity = 43/115 (37.39%), Postives = 54/115 (46.96%), Query Frame = 1
Query: 1 AHTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATR---------FLIDSWICPYSGEPTTMNCIHQRYPGAMTAAYTEQIPGPANLGFDCACSRGVGSLAN 318
A + +G RC+ + G C +H +KIKDS IP +GKGLF F D IC Y GE T N I Q+ A Y ++ N DCAC RG+GSL N
Sbjct: 26 ATSNTSGNRCKRKCIIGFEYCPIHLLYLKHLKIKDSLIPNSGKGLFVCNKSVGPNDIVFRKDDVICDYKGE-TINNAIRQQRYNGKNAPYAIELSN--NNIIDCACKRGIGSLIN 137
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A6H5J8I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8I0_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 3.650e-7 Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 229 MTAAYTEQIPGPANLGFDCACSRGVGSLANARFNADGKVSAL 354
MTA+Y E +PGP L D AC+RGV SL+N FNA+G VS+L
Sbjct: 1 MTASYAEMLPGPEQLHIDSACNRGVASLSNGLFNANGSVSSL 42
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Match: A0A7C1JRQ2_9BACT (SET domain-containing protein n=1 Tax=Chlorobi bacterium TaxID=2268192 RepID=A0A7C1JRQ2_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 3.870e-5 Identity = 27/74 (36.49%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 1 AHTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATRFLIDS-WICPYSGEPTTMNCIHQRY 219
A NG RCR P C H + +GV+++ STIP AG GLFA R+L ++ Y G+ ++ + RY
Sbjct: 25 AFIHPNGERCRRLTTITHPYCAQHTRVVHGVEVRPSTIPGAGLGLFAVRYLPKGVFLFNYDGDRLSVADYNARY 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig87.114.1 >prot_P-littoralis_Contig87.114.1 ID=prot_P-littoralis_Contig87.114.1|Name=mRNA_P-littoralis_Contig87.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=128bp AHTRANGIRCRNRVCFGSPVCWLHNCIKYGVKIKDSTIPEAGKGLFATRFback to top mRNA from alignment at P-littoralis_Contig87:197530..197913+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig87.114.1 ID=mRNA_P-littoralis_Contig87.114.1|Name=mRNA_P-littoralis_Contig87.114.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=384bp|location=Sequence derived from alignment at P-littoralis_Contig87:197530..197913+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig87:197530..197913+ >mRNA_P-littoralis_Contig87.114.1 ID=mRNA_P-littoralis_Contig87.114.1|Name=mRNA_P-littoralis_Contig87.114.1|organism=Pylaiella littoralis U1_48|type=CDS|length=384bp|location=Sequence derived from alignment at P-littoralis_Contig87:197530..197913+ (Pylaiella littoralis U1_48)back to top |