mRNA_P-littoralis_Contig867.18.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.600e-25 Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVG-GTKNPGAPKKPGKNSISYEHLP 333
T E+L +V+A++ L NMDQTP+Q EMP ETTLEKTGAK A I+TGGKEK R+T+VL V DG+K+ PRII+KG+PF+ G P KNS+++E P
Sbjct: 102 TFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHP 204
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE) HSP 1 Score: 107 bits (266), Expect = 2.260e-25 Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGT-KNPGAPKKPGKNSIS 318
T+E+L +V+A++ L NMDQTP+Q EMP ETTLEKTGAK A I+TGGKEK R+T+VL V DG+K+ PRII+KG+PF+ T G P KNS++
Sbjct: 269 TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVA 366
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.340e-25 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGT-KNPGAPKKPGKNSISYEHLP 333
T+E+L +V+A++ L NMDQTP+Q E+P ETTLEKTGAK A I+TGGKEK R+T+VL V DG+K+ PRII+KG+PF T G P KNS+++E P
Sbjct: 102 TSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHP 204
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.580e-24 Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGTKNPGAPKK--PGKNSISYE 324
T+E+L +V+A++ L NMDQTP+Q EMP ETTLEKTGAK A I+TGG+EK R+T+VL V DG+K+ PRII+KG+PF+ T + G K P KNS+++E
Sbjct: 284 TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVS-GKVKSTLPRKNSVAWE 383
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.690e-23 Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGTKNPGAPK--KPGKNSISYEHLPE 336
T+E+L +V A++ L NMDQTP+Q EMP ET+LEKTGAK A I TGGKEK R+T+ L V GD +K+ R I+KG+P + + PG K +P KNSI++E LPE
Sbjct: 40 TSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATGGKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDR-PGKGKATQPRKNSIAWEMLPE 143
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 102 bits (254), Expect = 2.480e-23 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGT-KNPGAPKKPGKNSISYEHLP 333
T+E+L +V+A++ L NMDQTP+Q EMP ETTLEKTGAK A ++TGG+EK R+T+VL V DG+K+ RII+ G+PF+ T G P KNS+++E P
Sbjct: 36 TSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHP 138
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5K417_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K417_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 8.300e-22 Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFV 264
T+E+L +V+A++ L NM QTP+Q EMP ETTLEKTGAK A I+TGGKE R+T+V V DG+K+ PRII+KG+PF+
Sbjct: 363 TSEQLASVEAEVFEELGNMKQTPVQQEMPVETTLEKTGAKDARISTGGKENERFTLVPAVMADGKKVSPRIIFKGTPFI 441
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.070e-21 Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGT-KNPGAPKKPGKNSISYEHLP 333
T+E+ +V+A++ L NMDQTP+Q EMP ETTLE TG K A I+TGGKEK R+T+VL V DG+ + P II+KG+PF+ T G P KNS+++E P
Sbjct: 256 TSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHP 358
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.560e-21 Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 28 TAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVG-GTKNPGAPKKPGKNSISYEHLP 333
++ +L V ++ L NMDQTP+Q EMP ETTLE TGAK A I TGGKEK R+T+ L V DG+K+ RII+KG+PFV T G +P KNSI++E LP
Sbjct: 256 SSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLP 358
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 9.710e-21 Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 31 AEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSACITTGG-KEKLRYTVVLTVRGDGQKMRPRIIYKGSPFVGGT-KNPGAPKKPGKNSISYEHLP 333
+E+L +V+A++ + NMDQ P+Q EMP ETTL+KTGAK A I+TGG EK R+T+VL V DG+K+ PRII++G+PF+ T G +P KN +++E P
Sbjct: 297 SEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHP 399 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig867.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig867.18.1 >prot_P-littoralis_Contig867.18.1 ID=prot_P-littoralis_Contig867.18.1|Name=mRNA_P-littoralis_Contig867.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp MEIEMDTKATAEELLAVQAKIIALLYNMDQTPIQAEMPSETTLEKTGAKSback to top mRNA from alignment at P-littoralis_Contig867:95267..96129- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig867.18.1 ID=mRNA_P-littoralis_Contig867.18.1|Name=mRNA_P-littoralis_Contig867.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=863bp|location=Sequence derived from alignment at P-littoralis_Contig867:95267..96129- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig867:95267..96129- >mRNA_P-littoralis_Contig867.18.1 ID=mRNA_P-littoralis_Contig867.18.1|Name=mRNA_P-littoralis_Contig867.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=339bp|location=Sequence derived from alignment at P-littoralis_Contig867:95267..96129- (Pylaiella littoralis U1_48)back to top |