mRNA_P-littoralis_Contig866.8.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: D7G3M9_ECTSI (NUC153 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M9_ECTSI) HSP 1 Score: 1078 bits (2787), Expect = 0.000e+0 Identity = 580/698 (83.09%), Postives = 612/698 (87.68%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKMRQKTEDEAESEDDAIEDRFTEVSQNKKGTNRR--RPLLENGSD-DASSSDGGFSEAEEERGGETRGHGSDFDSDVQAAARGVGKRKGKEASHKKKRGRGGN---------AAPGFYELNDEEDAATAAVGLGG 2232
MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLS+DV+YRRRIELLQDFDFPTASQKV SPD QYVIV GTYPPQIKVFEV+DLSMKFERHLDCEA+DFMPLAEG+EKLAFLL DRTLAFHAGYG HHSVRIPRFGRSLAYQ+ETCDM+VGCGDGEIHRFNLDQGRFRT +TL SG+SSS+G+ P AGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAV AAE+TLGGFQVS+VAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITG+KFHQGTERRVLSSD KTVKIWNRDDG V+TNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVT AEVEELGVSNLVG+PLLRGYMHGYFMDM+L+TRLKAVSEPFAYEEYRKKKVK+K+++KTKSRIS+R+NLPKVNRAMAERLLDKA SGDKK+RKAK E VSSSNPLGDDRFGAMFESA FEVDPESEEYARAHPTS+IANKMRQKTEDEAESEDDAIEDRFT+V KGT+ R PL S+ +SSSDGGFSE E ERG G DSD A R RK + +KKRGR G A PGFYELNDEEDAATAAVGLGG
Sbjct: 1 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPSGSSSSQGN--PTAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVTAAEQTLGGFQVSSVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGIKFHQGTERRVLSSDAKTVKIWNRDDGAVVTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLYTRLKAVSEPFAYEEYRKKKVKEKMEEKTKSRISIRTNLPKVNRAMAERLLDKAESGDKKKRKAKLEGEXXX-----XXXXXXXXVSSSNPLGDDRFGAMFESAEFEVDPESEEYARAHPTSVIANKMRQKTEDEAESEDDAIEDRFTKVGGINKGTSGRDGSPLAGRDSEAGSSSSDGGFSEEEGERGDGAAGS----DSDGSATGRAGKVRKKDDVVPRKKRGRDGKTTKGGKQSRAKPGFYELNDEEDAATAAVGLGG 687
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: A0A835Z278_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z278_9STRA) HSP 1 Score: 629 bits (1622), Expect = 1.490e-212 Identity = 370/748 (49.47%), Postives = 477/748 (63.77%), Query Frame = 1
Query: 208 VKIYNLSSGKTLPQWLSEKKRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRA-VASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERR--------VLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKM------RQKTEDEAES--EDDAI-EDRFTEVSQNKKGTNRRRPLLENGSDDASSSDGGFSEAEEERGGETRGHGSDFDSDVQAAARGVGKRKGKEASHKKKRGRGGNAAPGFYELNDEEDAATAAVGLGGDEXXXXXXXRRRVRAIPLEERISEARRSEGAIVDDRVIRTNAGVVREFSYAPAAG 2397
V+IYNLSSGKTLPQWL++K++R+LS+D YRRRIELLQDF+FPTASQ ++ SPDGQ+VIVTGTYPPQ+KV+EV++LSMKFERHLD E + L+ GFEKL FL DRTLAFHA YG HH+VRIPRFGR LAYQ+ CD++VG E++R NLD+GR+R P+TL + G NK+ L HQLL AGTDDG+VH++D+R G G G+A VASL L AE +V+A+AF DGLT+GVGTS+A CL +DLRSS P K+HQYGLP+T VKFH G VLSSD K VK W+ DG VL NVE PA++N VCVAHDARGDSGLL++A EQ+RV++YY+P LGPAPRWCSFLD LTEELEE A+VY+DYKFVT EVE LG+++LVG+PLLRGYMHG+FM +L RL+AVSEPFAYE YR+ K+++++++K KSRI++R LP VNR +AE+LL K G G AA + + AV++SNPLGDDRF MF+S FEVD S E+ R HP+ R+ D+ +S ED A+ DRFT V + A+ G ++ K A + A P F+ELN+ ED + A + LGG+ R + R++PLE+R+ E + E + D+V++T+AG+VREF++ P +G
Sbjct: 29 VEIYNLSSGKTLPQWLNDKQKRALSKDDGYRRRIELLQDFEFPTASQTIKMSPDGQFVIVTGTYPPQVKVYEVAELSMKFERHLDAECVAMEVLSAGFEKLVFLQADRTLAFHAAYGMHHAVRIPRFGRDLAYQQAACDLIVGGAGPELYRLNLDEGRYRAPLTLPG-----------DGGTNKLALSSVHQLLGAGTDDGWVHMFDTRAG--GRGKAPVASLHLGGG-------GAET-----EVTALAFAPDGLTLGVGTSAAQCLLYDLRSSDPLLTKDHQYGLPVTDVKFHSGGGAXXXXXXGGAVLSSDAKIVKAWDCADGAVLANVEAPANVNGVCVAHDARGDSGLLMLAGEQARVMAYYIPTLGPAPRWCSFLDSLTEELEEGDAATVYDDYKFVTRDEVEALGIASLVGTPLLRGYMHGFFMAAQLHNRLRAVSEPFAYEAYRRAKLRERVEEKRKSRIALRRALPAVNRPLAEKLLAKRG--------------------GAAAAADADAVAASNPLGDDRFAQMFQSRDFEVDDTSAEFLRHHPSGAPGGGRGRRGGARESDSDDLDSGAEDAALLGDRFTRVGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXTATPKAKAAGAKRPKTAPATR-------AKPKFFELNEGEDTS-AVLALGGERDRAQARERAQQRSLPLEDRLREMTQEERRVGRDKVVKTSAGLVREFTFTPKSG 719
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: A0A3M6VIN9_9STRA (NUC153 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIN9_9STRA) HSP 1 Score: 566 bits (1459), Expect = 1.490e-188 Identity = 334/744 (44.89%), Postives = 459/744 (61.69%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEK--KRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKMRQKTED-EAESEDDAIEDRFTEVSQNKKGTNRRRPLLENGSDDASSSDGGFSEAEEERGGETRGHGSDFDSDVQAAARGVGKRKGKEASHKKKRGRGGNAAPGFYELNDEEDAATAAVGLGGDEXXXXXXXRRRVRAIPLEERISEARRSEGAIVDDRVIRT-NAGVVREFSYAPAA 2394
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D DYRRR+ELLQDF FP ASQ+VR S DG +V+ TG YPP +KVF+V DLS+KFER LD E + F LA F KLAFL DR++AFHA YG H+++RIP+FGR + Y +E C++ V +++R NLDQGRF P+ L S +S++ N I+L HQL+ G +DG V ++DSR Q V SLD+ AA + + +V+A+ FD DGLT GVGTS CL +DLRSSRP K+HQYGLPI ++FH ++ V+SSD K +KIWNR DG V TNVETPA++ DVCV A+G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVG+PLL+ YMHG+FMD RL+ ++KAVSEPFAY+++RKKK+K+K++ K +RI+++ LPK+NRA AER+L D KR+K +E E ++ + NPLGD+RF MF S FEVD ES+ Y HP ++ + R++ ED ++++ D E E DG F+ ++E E G SD SD + + +R ++A+ K KR AP FYE+ + E + G ++++ +PL ER+ R +E + T G +RE S+ P A
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLNEKGGSRKALAKDEDYRRRVELLQDFHFPAASQRVRMSADGNFVVATGVYPPSVKVFDVRDLSLKFERGLDAEVVQFEVLAADFGKLAFLQADRSVAFHAPYGTHYNMRIPKFGRDMTYHRENCEIYVAASGSDVYRINLDQGRFVAPLELQSQSSAA----------NVIQLNPVHQLIGVGCEDGVVEMFDSRSQQR-----VGSLDV------AAQCTSAKPTKQVEVTALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKDHQYGLPIVNLQFHDYAQK-VISSDAKVIKIWNRRDGAVFTNVETPAEVKDVCVVDGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIATFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVSEPFAYDDWRKKKLKEKVEAKQSNRITIQRRLPKINRATAERILQS----DAKRKK------NSKEVDEEEVDADKAFL---NPLGDERFSRMFTSTDFEVDEESDTYRMLHPNAINMKQQRKQKEDMDSDAATDDDEGXXXE------------------------GDGRFARVDDEED-EVEGRPSDESSDEEEQNE-IHERAPQQAASKGKR----KPAPKFYEIAEGEKMGDL-MSFGSSNDRAAQREKKQLAKLPLAERLRMQRVTEKERSAFKKEETAGGGYIREMSFVPQA 678
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: G4YXE2_PHYSP (NUC153 domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4YXE2_PHYSP) HSP 1 Score: 565 bits (1457), Expect = 3.170e-188 Identity = 299/568 (52.64%), Postives = 396/568 (69.72%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEK--KRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKMR 1872
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D DYRRR+ELLQDF FP SQ+VR S DG YV+ TG YPP +KV++V DLS+KFER LD E + F L+ F KLAFL DR++AFHA YG H+++RIP+FGR + Y +E C++ V +++R NLDQGRF P+ L S AS++ N ++L HQLL G +DG V ++DSR Q V +LD+ AA A+ ++ +VSA+ FD DGLT GVGTS CL +DLRSSRP K HQYGLPI ++FH R+V+SSD K +KIW+R DG V TNVETPA++ DVC+ A+G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVG+PLL+ YMHG+FMD RL+ ++KAV+EPFAY+E+RKKK+K+K++ K +RI+++ LPKVNRA AER+L + KR+K G+ A GE A++ S S SNPLGD+RF MF S+ FEVD ES+ Y HP + + R
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLAEKGGSRKALAKDEDYRRRVELLQDFHFPAGSQRVRMSADGNYVVATGVYPPSVKVYDVRDLSLKFERGLDAEVVQFEVLSSDFGKLAFLQADRSVAFHAPYGTHYNMRIPKFGRDMTYHRENCELYVAASGSDVYRINLDQGRFVAPLELQSQASAA----------NVVQLNPIHQLLGVGCEDGVVEMFDSRSQQR-----VGTLDI------AAHFASSKSDKQLEVSALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKNHQYGLPIMDLQFHDYA-RKVISSDAKVIKIWDRRDGAVFTNVETPAEVKDVCIVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQANRITIQRRLPKVNRATAERILQN----EAKRKK------NGKGADGEEADADS---SFSNPLGDERFSRMFTSSDFEVDEESDTYRMLHPNAANTKQQR 533
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: H3GLA6_PHYRM (NUC153 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA6_PHYRM) HSP 1 Score: 563 bits (1452), Expect = 1.620e-187 Identity = 304/597 (50.92%), Postives = 408/597 (68.34%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEK--KRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKMRQKTED---EAESED-----DAIEDRFTEV 1935
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D DYRRR+ELLQDF F SQ+VR S DG +V+ TG YPP +KVF+V DLS+KFER LD E + F L+ F KLAFL DR++AFHA YG+H+++RIP+FGR + Y +E C++ V +++R NLDQGRF P+ L S AS++ N +++ HQLL G DDG V ++D+R Q V SLD V A +++++ L +V+A+ FD DGLT GVGTS CL +DLRSSRP K HQYGLPI ++FH R+V+SSD K +KIW+R DG V TNVETPA++ DVCV A+G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVG+PLL+ YMHG+FMD RL+ ++KAV+EPFAY+E+RKKK+K+K++ K +RI+++ LPKVNRA AER+L+ + KR+K +G E S SNPLGDDRF MF S F+VD ES+ Y HP ++ A + R++ ED +A ++D D + DRF V
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLAEKGGSRKALAKDEDYRRRMELLQDFHFRAGSQRVRMSADGNFVVATGGYPPLVKVFDVRDLSLKFERGLDAEVVQFEVLSADFGKLAFLQADRSVAFHAPYGSHYNMRIPKFGRDMCYHRENCELYVAASGSDVYRLNLDQGRFGAPLELQSQASAA----------NVVKMNPIHQLLGVGCDDGIVEMFDTRSQQR-----VGSLD----VAAYCASSSDKQL---EVTALRFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKNHQYGLPIVDLQFHDYA-RKVISSDAKVIKIWDRRDGAVFTNVETPAEVKDVCVVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQSNRITIQRRLPKVNRATAERMLEN----EAKRKKNSKEADG---------EDDDADKSFSNPLGDDRFSRMFTSTDFQVDEESDTYRMLHPNAVNAKQQRKQQEDMDSDAGTDDXXXXXDEVGDRFARV 561
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: A0A662WTJ8_9STRA (NUC153 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTJ8_9STRA) HSP 1 Score: 560 bits (1444), Expect = 3.770e-186 Identity = 296/559 (52.95%), Postives = 386/559 (69.05%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEK--KRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHP 1845
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D DYRRR+ELLQDF FP SQ+VR S DG Y++ TG YPP +KVF+V DLS+KFER LD E + L+ F KLAFL +DR++AFHA YG H+++RIP+FGR + Y +E C++ VG +++R NLDQGRF P+ L S S++ N ++L HQLL G DDG V ++DSR Q V SLD+ ++A A A +V+A+ FD DGLT GVGTS CL +DLRSSRP K HQYGLPI ++FH R+V+S+D K VKIW+R DG V TNVETPA+ DVC+ A+G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVG+PLL+ YMHG+FMD RL+ ++KAV+EPFAY+++RKKK+K+KI+ K +RI+++ LPK+NRA AERLL GD K +K + E AE + + +NPLGDDRF MF S FEVD ESE Y HP
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLAEKGGSRKALAKDEDYRRRVELLQDFHFPAGSQRVRMSSDGSYIVATGMYPPSVKVFDVRDLSLKFERRLDAEVVQLEVLSSDFGKLAFLQSDRSVAFHAPYGTHYAMRIPKFGRDMCYHRENCELYVGASGADVYRLNLDQGRFLAPLELRSAYSAA----------NVVQLNPIHQLLGVGCDDGVVEMFDSRSQQR-----VGSLDVGAHFSSSAGADASPV----EVTALQFDDDGLTFGVGTSEGQCLLYDLRSSRPLLEKTHQYGLPIINLQFHDYA-RKVISTDAKVVKIWDRRDGAVFTNVETPAEAKDVCIVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIATFGLEHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDDWRKKKLKEKIEAKQANRITIQRRLPKINRATAERLLQ----GDAKSKKQQGEAE---------AEMPTADKAFANPLGDDRFSRMFTSNDFEVDEESEAYRLLHP 526
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: A0A484EDZ8_BRELC (NUC153 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDZ8_BRELC) HSP 1 Score: 553 bits (1426), Expect = 1.330e-183 Identity = 330/750 (44.00%), Postives = 448/750 (59.73%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEK--KRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIANKMRQKTED-------EAESEDDAIEDRFTEVSQNKKGTNRRRPLLENGSDDASSSDGGFSEAEEERGGETRGHGSDFDSDVQAAARGVGKRKGKEASHKKKRGRGGNAAPGFYELNDEEDAATAAVGLGGDEXXXXXXXRRRVRAIPLEERISEARRSEGA-IVDDRVIRTNAGVVREFSYAPAA 2394
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D +YRRR+ELLQDF F SQ+VR SPDG YV+ TG YPP +KV++V DLS+KFER LD E + L+ F KLAFL DR++AFHA YG H+S+RIPRFGR + Y +E C++ V +I+R NLDQGRF P+ L + ++ N ++L HQLL G DDG V ++D+R Q V SLD+ A A + F+V+A+ FD DGLT GVGT+ CL +DLRSSRP K HQYGLPI ++FH R+V+SSD K +KIW+R DG V TNVETPA+I DVCV ++G SG+LL+A EQ R++SYY+P LG AP+WCSFLD LTEELEEE +++VY+DY+FVT A++ G+ +LVG+PLL+ YMHG+FM+ RL+ ++KAV+EPFAYEE+RKKK+++KI+ K +RI++ LPK+NRA AER+L + KR+K G + G E + SNPL D+RF MF S+ FEVD ESE Y HP++ + ++ ED + E+ DD + DRF V + + N LE D S +G +VQ A K S K+KR P FYE+ + E + G R+ + +PL +R+ R E + T+ G +RE S+ P A
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLAEKGGNRKALAKDEEYRRRVELLQDFHFRAGSQRVRMSPDGNYVVATGLYPPLVKVYDVRDLSLKFERGLDAEIVQLEVLSSDFGKLAFLQADRSVAFHAPYGTHYSMRIPRFGRDMTYHRENCELYVAASGSDIYRINLDQGRFVAPLELQTQFLAA----------NVVDLNPIHQLLGVGCDDGIVEMFDTRNQQR-----VGSLDI-------AAQYATNSNKQFEVTALKFDDDGLTFGVGTTEGQCLLYDLRSSRPLLEKHHQYGLPIVNLQFHDYA-RKVVSSDAKVIKIWDRRDGAVFTNVETPAEIKDVCVVEGSQGKSGVLLVAGEQERIMSYYIPELGIAPKWCSFLDSLTEELEEEAQSTVYDDYRFVTRADIASFGLDHLVGTPLLKAYMHGFFMNARLYNKVKAVAEPFAYEEWRKKKIQEKIESKQANRITIPRRLPKINRATAERILQN----ESKRKK------GNTQVGDETNSDQNF----SNPLRDERFSRMFTSSDFEVDEESEAYRMLHPSAANTRQKLKQQEDMDSDAGTDDEAADDEVSDRFARVIDDDEEEN----TLEGSPSDEFSDEG---------------------QEVQQPA-------AKRTSPKEKR----RPPPKFYEIANGEKVGDL-MSFGSSSDRAAQRERKELARLPLAKRLKIQRIHESERSAFKKAETTDGGYIREMSFVPQA 676
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: W7TBN4_9STRA (Nucleolar protein 10 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBN4_9STRA) HSP 1 Score: 551 bits (1421), Expect = 2.470e-182 Identity = 303/591 (51.27%), Postives = 398/591 (67.34%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAER----TLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDG------TVLTNVETPADINDVCVAHDA----RGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQ-------------EASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSS--NPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLIA 1860
MS MQV+TF G K+YNLS+GK +PQWLSEK RR LS++ DYRRR+EL+QD +FPTASQ++R SPDGQ+++ +G YPP ++V+E+ ++S+KFER L E +DF+ L+E KL FL DRTL+FHA YG H+S+RIP FGR+L Y +CD+ + E++R NL++GRFR P+ SSP G+N + L H LL AG +DG V ++D R + A++SLD+ A AVA A R GG VSAV FD DGLTM VGTS+ HCL +DLRSSRP +KEHQYGLPI +KFHQ R+VLS+D K +K+W RD +LTN+ETPA IND+CV D R DSGLL+MA EQ R+++YYVPALGPAPRWCSFLD +TEELEE AS+Y+DYKFV+ E+EEL SNL+G+PLLRGYMHG+FMD L +L+AVS+P AY+E+RK +V+++++ + +RIS + LP VNRA+AERLL GSG +GGE A ++ G IA + NPLGDDRF ++F + F+VD ESEE+ +P + A
Sbjct: 1 MSRMQVATFSGCKVYNLSAGKAVPQWLSEKHRRQLSKEEDYRRRVELIQDLEFPTASQRLRVSPDGQFLVASGMYPPAVRVYELQEMSLKFERRLTAEVVDFLILSEDVGKLCFLQNDRTLSFHAPYGTHYSLRIPTFGRALTYHPPSCDLYIAAAASELYRLNLEEGRFRAPVPC----------SSPG-GVNVLALNPVHFLLGAGGEDGRVEMFDPRSRE-----ALSSLDV-----AGAVAEAGRWGGGPEGGMAVSAVEFDRDGLTMAVGTSAGHCLLYDLRSSRPLALKEHQYGLPIVALKFHQRA-RQVLSADSKVLKVWGRDGAGLEGGRALLTNIETPAAINDLCVVPDGGGGKRNDSGLLVMAGEQERIMTYYVPALGPAPRWCSFLDSITEELEEGGGDGLEGGAGAGGGAASIYDDYKFVSREELEELNGSNLIGTPLLRGYMHGFFMDAGLHAKLRAVSQPAAYDEWRKARVRERLEARRSARISFQKALPAVNRALAERLLKTRGSG-----------KGGERAEEDSGGEGRIAAGAEAVNPLGDDRFASLFTRSDFQVDEESEEFKLRNPNGVAA 558
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: A0A8K1FME9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FME9_PYTOL) HSP 1 Score: 547 bits (1410), Expect = 2.660e-181 Identity = 282/557 (50.63%), Postives = 384/557 (68.94%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHP 1845
M+ + S+ +GVKIYNL+SGKTLPQWL+EK ++SLS+D DYRRR+ELLQDF FP+ SQ+V+ S DG Y++ TG YPP +KVF+V +LS+KFER LD E + F L+ F KLAFL DRTLAFHA YG+H+++RIP+FGR + Y +E CD+ + E++R NLDQGRF P+ + S A+ N ++L HQLL G +DG V WD+R + G L DS+ + + A G +++++ FD DGLT GVGTS+ HCL +DLRSS+P K HQYGLPI +KFH R+VLSSD K +KIW++ G + TNVETP+++ DVCV ++G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +++VY+DYKFVT EV G+ +LVG+PLL+ YMHG+FMD RL+ ++KA++EPFAY+++RK++++ K++ K +RI+++ LPKVNRA AER+L KK++ A + G++ G E S NPLGDDRF MF S FE+D ES+ Y HP
Sbjct: 1 MAALAASSLNGVKIYNLASGKTLPQWLAEKTKKSLSRDEDYRRRVELLQDFHFPSGSQRVKMSLDGNYIVATGMYPPIVKVFDVRELSLKFERRLDSEVVQFEILSPDFGKLAFLQADRTLAFHAPYGSHYNLRIPKFGRDMCYHRENCDIYIAASASEVYRVNLDQGRFLAPLEIGSSAA------------NVVKLNPIHQLLGVGCEDGMVECWDTRSQRRVG--------LLDSIPS--LVGARDLEKGVEITSLEFDDDGLTFGVGTSNGHCLLYDLRSSKPLLQKTHQYGLPILDIKFHD-YGRKVLSSDAKVIKIWDKKTGDIFTNVETPSEVRDVCVVEGSQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQSTVYDDYKFVTRQEVVSFGLEHLVGTPLLKAYMHGFFMDARLYAKVKAIAEPFAYDQWRKERLQAKLEAKQANRITIQRRLPKVNRAAAERML--LAEEKKKQKLAAKGEDVGDDEGTEQ--------SFLNPLGDDRFAKMFSSKDFEIDEESDTYRLLHP 524
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Match: M4BWD3_HYAAE (NUC153 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWD3_HYAAE) HSP 1 Score: 547 bits (1410), Expect = 3.540e-181 Identity = 287/559 (51.34%), Postives = 379/559 (67.80%), Query Frame = 1
Query: 175 MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKK--RRSLSQDVDYRRRIELLQDFDFPTASQKVRASPDGQYVIVTGTYPPQIKVFEVSDLSMKFERHLDCEAIDFMPLAEGFEKLAFLLTDRTLAFHAGYGNHHSVRIPRFGRSLAYQKETCDMLVGCGDGEIHRFNLDQGRFRTPITLASGASSSRGSSSPNAGINKIELCVAHQLLAAGTDDGFVHLWDSRQGQSGGGRAVASLDLRDSVDAAAVAAAERTLGGFQVSAVAFDTDGLTMGVGTSSAHCLTFDLRSSRPTFVKEHQYGLPITGVKFHQGTERRVLSSDLKTVKIWNRDDGTVLTNVETPADINDVCVAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTAAEVEELGVSNLVGSPLLRGYMHGYFMDMRLFTRLKAVSEPFAYEEYRKKKVKDKIDDKTKSRISMRSNLPKVNRAMAERLLDKAGSGDKKRRKAKSPPEGGEEAGGEAAESGSIAVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHP 1845
M+ + S+ +GVKIYNLSSGKTLPQWL+EK R++L++D DYRRR+ELLQDF FP + Q+VR S DG +V+ TG YPP +KVF+V DLS+KFER LD E + F L+ F KLAFL DR++ FHA YG H+S+RIP+FGR + Y +E C++ V E++R NLDQGRF +P+ L S +S++ N ++L HQLL G +DG V ++DSR Q G VA+ R D +++A+ FD DGLT GVGTS CL +DLRS+RP K HQYGLPI ++FH R+V+SSD K +KIW+R DG V TNVETPA + DVC+ A+G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ LG+ +LVG+PLL+ YMHG+FMD RL ++KAV+EPFAY+E+RKKK+ +K++ K +RI+++ LP +NRA AER+L G +K KA + GE+ + A SNPL D+RF MF S +EVD ESE Y HP
Sbjct: 1 MAALAASSLNGVKIYNLSSGKTLPQWLAEKSGSRKALAKDEDYRRRVELLQDFHFPASCQRVRMSSDGHFVVATGVYPPLVKVFDVRDLSLKFERGLDAEVVQFEVLSSDFGKLAFLQADRSVTFHAPYGAHYSLRIPKFGRDMTYHRENCELYVAASGSEVYRINLDQGRFVSPLELQSQSSAA----------NVVQLNPIHQLLGVGCEDGVVEMFDSRSQQRVGSLDVAAQCARSKADKQV-----------EITALRFDDDGLTFGVGTSEGQCLLYDLRSTRPLLEKSHQYGLPIVNLQFHDYA-RKVISSDAKVIKIWDRQDGAVFTNVETPAAVKDVCIVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASLGLDHLVGTPLLKAYMHGFFMDARLHKKVKAVTEPFAYDEWRKKKLVEKVEAKHSNRITIQRRLPTINRATAERILQNEGKRNKNNTKAIN----GEDVDADKA--------LSNPLDDERFSRMFTSTDYEVDEESETYRMLHP 525 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig866.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig866.8.2 >prot_P-littoralis_Contig866.8.2 ID=prot_P-littoralis_Contig866.8.2|Name=mRNA_P-littoralis_Contig866.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=784bp MSGMQVSTFHGVKIYNLSSGKTLPQWLSEKKRRSLSQDVDYRRRIELLQDback to top mRNA from alignment at P-littoralis_Contig866:44927..58043+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig866.8.2 ID=mRNA_P-littoralis_Contig866.8.2|Name=mRNA_P-littoralis_Contig866.8.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13117bp|location=Sequence derived from alignment at P-littoralis_Contig866:44927..58043+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig866:44927..58043+ >mRNA_P-littoralis_Contig866.8.2 ID=mRNA_P-littoralis_Contig866.8.2|Name=mRNA_P-littoralis_Contig866.8.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2352bp|location=Sequence derived from alignment at P-littoralis_Contig866:44927..58043+ (Pylaiella littoralis U1_48)back to top |