mRNA_P-littoralis_Contig863.28.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig863.28.3
Unique NamemRNA_P-littoralis_Contig863.28.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A6H5JAG5_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG5_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.640e-32
Identity = 71/104 (68.27%), Postives = 80/104 (76.92%), Query Frame = 2 
Query:   62 MLFKMGLILCAAYAAQASSSQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASG 373
            +L ++  +LCAA    ASSSQRKYDGSTLSYDPKGR++QVEYA+EATRRGRT +GVCG  CVALVTRDP  S P+  SSCRA     G  VWAVDTHVGI A G
Sbjct:    6 LLLEIVCVLCAASTVGASSSQRKYDGSTLSYDPKGRIYQVEYAMEATRRGRTVLGVCGGGCVALVTRDP--SPPT--SSCRAAGPHKG--VWAVDTHVGIAACG 103
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A6H5K6L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L4_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 7.000e-30
Identity = 165/319 (51.72%), Postives = 185/319 (57.99%), Query Frame = 2 
Query:  452 MPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXVR--RRKGRGTSPG--DAMNRRSVPADPATV-VDRVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKGWLGGEREGEDRRRXXRPLEPEHR-----------EPSIGXXXXXXVGRRGNGASYSAGRNERREYGEDEHGKR---RGGLRASELSAAIYGXXXXXGVD--------GEWDGED--------GEREGAWEQGVGCTQEDFEEILLELQAEE 1303
            MPC IL+RRLADLIHSCTTRGGKRPLAVDIL+GG D+HAGASLH+VQATGAFQRYRA AAGXXXXXXXXXXXXXXXXXX     XXXX    R+      PG      R+ VP D  T   D    G               XXXXXXXXXXXXXXXXXXXXX   +G L                 PEHR           EP+ GXXXXXX          SAG       GE+ HG+    RGGLRA+EL+A +YG      V+        GE  G+         GE EGAWEQGVGC++E+ E ILLEL+AE+
Sbjct:    1 MPCQILSRRLADLIHSCTTRGGKRPLAVDILVGGVDDHAGASLHRVQATGAFQRYRAFAAGXXXXXXXXXXXXXXXXXXDAREVXXXXXDGLRQASDDAVPGYLSGETRQGVPVDATTTSADGASSGEDGGRGDAEDSATVAXXXXXXXXXXXXXXXXXXXXXGQGRGTLA----------------PEHRAALKRAVAALWEPAGGXXXXXXXXX----XXXSAG-------GEERHGREAATRGGLRAAELTATVYGIQRQASVESPKEERGGGESLGDPVGDAGLGGGEGEGAWEQGVGCSREEMESILLELEAED 292
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A7D6BUE9_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Fermentimicrarchaeum limneticum TaxID=2795018 RepID=A0A7D6BUE9_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 1.760e-24
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 2 
Query:  119 SQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            S + YD +   + P GR+FQVEYA EA RRG TAVGV   DCV LV      S+   P S + +        + +D H+ +TASGL +D + +VD ART   +HR ++  P+    +++ L D +   T  GG RP  V +L+ G D      L++ + +GA   Y+A A G
Sbjct:    5 SPQAYDRAITVFSPDGRLFQVEYAKEAVRRGATAVGVICADCVVLVAHKNIVSNLLVPESMKKI--------FKIDNHIAVTASGLVADARRLVDMARTEAQKHRLLYNEPISVESVSKSLCDTMQIFTQYGGIRPFGVSLLIAGFDSEP--RLYEAEPSGALTGYKAAAIG 166
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A7J3BP35_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A7J3BP35_9ARCH)

HSP 1 Score: 111 bits (278), Expect = 4.440e-24
Identity = 60/172 (34.88%), Postives = 90/172 (52.33%), Query Frame = 2 
Query:  119 SQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            S + YD +   + P GR+FQVEYA EA +RG TA+G+C ++ V  V         SK    + +       ++ VD H+ +TASGL +D + +V+ AR     HR  +  P P   +AR + DL+   T  GG RP  V +L+GG D      L++ + +GA   Y A + G
Sbjct:    5 SPQAYDRAITVFSPDGRLFQVEYAKEAVKRGATAIGICSKNSVVFVA--------SKTIHSKLIVADSLKKIFEVDEHIAVTASGLIADARRLVETARVEAQRHRITYNEPAPVETIARSVGDLLQVYTQYGGIRPFGVSLLIGGVDSSKRPELYEAEPSGAMTAYYADSIG 168
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A5E4I2E0_9ARCH (Proteasome subunit alpha n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4I2E0_9ARCH)

HSP 1 Score: 110 bits (275), Expect = 1.120e-23
Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 2 
Query:  113 SSSQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            S   + YD +   + P GR+FQVEYA EA +RG TAVGV   D V L      +SS   P S + +        + +DTH+  TASGL +D + +VD AR     HR  +  P    ++A+ L D++ + T  GG RP  V +L+ G D    A L++ + +GA   Y+A A G
Sbjct:    4 SPQAQAYDRAITVFSPDGRLFQVEYAKEAVKRGATAVGVVCADGVVLAAFKNATSSLLVPESMKKI--------FEIDTHIASTASGLIADARRLVDIARLEAQRHRLSYAEPASVELIAKNLCDIMQAYTQYGGIRPFGVSLLIAGVD--GSAKLYEAEPSGALTGYKAAAVG 167
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A5E4P5I2_9ARCH (Proteasome subunit alpha n=1 Tax=uncultured archaeon TaxID=115547 RepID=A0A5E4P5I2_9ARCH)

HSP 1 Score: 110 bits (274), Expect = 1.560e-23
Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = 2 
Query:  119 SQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            S + YD +   + P GR+FQVEYA EA +RG TA+GV  ++ V +V     SS    P   R +        + VD H+  TASGL  D + +VD AR    +H+  +G  +    +A+ ++DL+ + T  GG RP  V +LLGG D  A   L +V  +GA   Y+A A G
Sbjct:    5 SPQAYDRAITVFSPDGRLFQVEYAKEAVKRGATAIGVTCDEGVVIVAHKAISSQLLVPEFMRKI--------FMVDDHIAATASGLVGDARRLVDLARMEAQKHKMTYGEDVTVESIAKSVSDLMQALTQYGGMRPFGVSLLLGGVDSEA--RLFEVDPSGALSGYKAAAIG 166
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A1J5T6V3_9ARCH (Proteasome subunit alpha n=1 Tax=Marine Group III euryarchaeote CG-Bathy1 TaxID=1889001 RepID=A0A1J5T6V3_9ARCH)

HSP 1 Score: 108 bits (269), Expect = 7.290e-23
Identity = 64/168 (38.10%), Postives = 89/168 (52.98%), Query Frame = 2 
Query:  131 YDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            YD +   + P GR+FQVEYA EA +RG T VG+  +D V L+      S   +P S   V  +DG        +VG   SGL +D + +VD AR  C  +RF +G  MP   L ++L D   S T  GG RP    +L+ G DE+ GA L++   +GA   Y+A+  G
Sbjct:    8 YDRAITVFSPDGRLFQVEYAREAVKRGTTTVGIKYKDGVVLLVEKRVGSRLVEPDSIEKVFKIDG--------NVGCATSGLVADARSLVDRARVECQTNRFNYGEEMPIEALVKKLCDFKQSYTQYGGVRPFGTALLVAGVDEY-GAHLYETDPSGAMTSYKAIGIG 166
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BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: S5ZKP7_9CREN (Proteasome subunit alpha n=5 Tax=Thermofilum TaxID=2268 RepID=S5ZKP7_9CREN)

HSP 1 Score: 107 bits (268), Expect = 9.920e-23
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 2 
Query:  131 YDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            YD +   + P+GR++QVEYA EA +RG TA+GV   D V L           K SS   + G +   +  +DTHVG+  +GL  D + ++D AR +   HR ++G P+P  +L +R+ D+    T  GG RP  V  L  G D  AG  L Q    G + R +A A G
Sbjct:   10 YDRAITIFSPEGRLYQVEYAFEAVKRGMTALGVKAVDGVVLAVE--------KRSSSPLIEGTEK--IKKIDTHVGVAFAGLFGDARVLIDQARVYAQSHRLVYGEPIPIELLVKRICDIKQVYTQHGGVRPFGVAFLFAGVDR-AGPHLVQTDPGGTYLRCKARAIG 166
[Close]
BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: A0A842SVT5_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A842SVT5_9ARCH)

HSP 1 Score: 107 bits (267), Expect = 1.480e-22
Identity = 65/172 (37.79%), Postives = 92/172 (53.49%), Query Frame = 2 
Query:  119 SQRKYDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            S + YD +   + P GR+FQVEYA EA +RG TA G+  +D +ALV      SS   P S + +        + VD H+ +TASGL +D + +V  AR     HR  +  P     +AR + DL+   T  GG RP  V +L+GG DE  GA L + + +GA   Y+A + G
Sbjct:    5 SPQAYDRAITVFSPDGRLFQVEYAKEAVKRGATAAGIATKDGLALVAFKSIHSSLVVPGSLKKI--------FEVDNHICVTASGLIADARRLVYIARVDAQRHRLTYSEPPTVDNIARSVCDLMQVYTQYGGIRPFGVSLLIGGVDEE-GAKLFEAEPSGAMTAYKADSIG 167
[Close]
BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Match: E0SQX3_IGNAA (Proteasome subunit alpha n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) TaxID=583356 RepID=E0SQX3_IGNAA)

HSP 1 Score: 107 bits (267), Expect = 1.550e-22
Identity = 63/168 (37.50%), Postives = 94/168 (55.95%), Query Frame = 2 
Query:  131 YDGSTLSYDPKGRMFQVEYAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGVWAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLADLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG 634
            YD +   + P G+++QVEYA EA RRG T++G+  E+ V L+          K +    V  L+   V+AVDTH+G T SGL  D + ++D AR     HR  F  P+   +LAR + D+  + T + G RP  V +++GG D   GA L + + +G + +Y AVAAG
Sbjct:   10 YDRALTIFSPDGKLYQVEYAAEAVRRGWTSLGIKSENGVVLIAER------RKVAPLHDVMNLEK--VFAVDTHIGATFSGLGHDGRILIDYARLIAVRHRLTFDEPVDVELLARTICDIKQAYTQQAGVRPFGVSLIIGGVDRK-GAELVKTEPSGLYFKYYAVAAG 168
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig863.28.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAG5_9PHAE1.640e-3268.27PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A6H5K6L4_9PHAE7.000e-3051.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7D6BUE9_9ARCH1.760e-2437.21Proteasome subunit alpha n=1 Tax=Candidatus Fermen... [more]
A0A7J3BP35_9ARCH4.440e-2434.88Proteasome subunit alpha n=1 Tax=Candidatus Micrar... [more]
A0A5E4I2E0_9ARCH1.120e-2336.78Proteasome subunit alpha n=1 Tax=uncultured archae... [more]
A0A5E4P5I2_9ARCH1.560e-2337.21Proteasome subunit alpha n=1 Tax=uncultured archae... [more]
A0A1J5T6V3_9ARCH7.290e-2338.10Proteasome subunit alpha n=1 Tax=Marine Group III ... [more]
S5ZKP7_9CREN9.920e-2336.90Proteasome subunit alpha n=5 Tax=Thermofilum TaxID... [more]
A0A842SVT5_9ARCH1.480e-2237.79Proteasome subunit alpha n=1 Tax=Candidatus Micrar... [more]
E0SQX3_IGNAA1.550e-2237.50Proteasome subunit alpha n=1 Tax=Ignisphaera aggre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig863contigP-littoralis_Contig863:94157..99177 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1365176.N186_03850
Preferred namepsmA
PFAMsProteasome,Proteasome_A_N
Model size1956
Max annot lvl28889|Crenarchaeota
KEGG koko:K03432
KEGG Pathwayko03050,map03050
KEGG ModuleM00342,M00343
Hectar predicted targeting categorysignal peptide
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019773,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369
Exons6
Evalue4.01e-24
EggNOG OGsCOG0638@1|root,arCOG00971@2157|Archaea,2XQ8X@28889|Crenarchaeota
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-07_005450.1
EC3.4.25.1
DescriptionComponent of the proteasome core, a large protease complex with broad specificity involved in protein degradation
Cds size1290
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig863.28.3prot_P-littoralis_Contig863.28.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig863 94789..99143 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.8633535-UTR-P-littoralis_Contig863:94156..947881680791738.8633535-UTR-P-littoralis_Contig863:94156..94788Pylaiella littoralis U1_48UTRP-littoralis_Contig863 94157..94788 -
1680791738.9556928-UTR-P-littoralis_Contig863:99143..991771680791738.9556928-UTR-P-littoralis_Contig863:99143..99177Pylaiella littoralis U1_48UTRP-littoralis_Contig863 99144..99177 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.876751-CDS-P-littoralis_Contig863:94788..951001680791738.876751-CDS-P-littoralis_Contig863:94788..95100Pylaiella littoralis U1_48CDSP-littoralis_Contig863 94789..95100 -
1680791738.8928013-CDS-P-littoralis_Contig863:95133..955941680791738.8928013-CDS-P-littoralis_Contig863:95133..95594Pylaiella littoralis U1_48CDSP-littoralis_Contig863 95134..95594 -
1680791738.9038424-CDS-P-littoralis_Contig863:96352..964291680791738.9038424-CDS-P-littoralis_Contig863:96352..96429Pylaiella littoralis U1_48CDSP-littoralis_Contig863 96353..96429 -
1680791738.918353-CDS-P-littoralis_Contig863:97185..972871680791738.918353-CDS-P-littoralis_Contig863:97185..97287Pylaiella littoralis U1_48CDSP-littoralis_Contig863 97186..97287 -
1680791738.9327908-CDS-P-littoralis_Contig863:97822..980311680791738.9327908-CDS-P-littoralis_Contig863:97822..98031Pylaiella littoralis U1_48CDSP-littoralis_Contig863 97823..98031 -
1680791738.9424524-CDS-P-littoralis_Contig863:99014..991431680791738.9424524-CDS-P-littoralis_Contig863:99014..99143Pylaiella littoralis U1_48CDSP-littoralis_Contig863 99015..99143 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig863.28.3

>prot_P-littoralis_Contig863.28.3 ID=prot_P-littoralis_Contig863.28.3|Name=mRNA_P-littoralis_Contig863.28.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=430bp
MSLSHAPSRMLFKMGLILCAAYAAQASSSQRKYDGSTLSYDPKGRMFQVE
YAIEATRRGRTAVGVCGEDCVALVTRDPPSSSPSKPSSCRAVAGLDGGGV
WAVDTHVGITASGLRSDIQYVVDCARTWCSEHRFIFGAPMPCHILARRLA
DLIHSCTTRGGKRPLAVDILLGGTDEHAGASLHQVQATGAFQRYRAVAAG
GGGVEATARLASAVAAAAAERAQEEESVRRRKGRGTSPGDAMNRRSVPAD
PATVVDRVVGGVSGGEGRGDGGEDDVEDDTKTAAAAGDTDGAGEAAGEAR
KGWLGGEREGEDRRRRRRPLEPEHREPSIGGGGGGGVGRRGNGASYSAGR
NERREYGEDEHGKRRGGLRASELSAAIYGGGGGGGVDGEWDGEDGEREGA
WEQGVGCTQEDFEEILLELQAEEEEEEEQ*
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mRNA from alignment at P-littoralis_Contig863:94157..99177-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig863.28.3 ID=mRNA_P-littoralis_Contig863.28.3|Name=mRNA_P-littoralis_Contig863.28.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5021bp|location=Sequence derived from alignment at P-littoralis_Contig863:94157..99177- (Pylaiella littoralis U1_48)
GTGCGACGGGGGAGGAGCAGCGCACCTTCTAGTCATGTCTCTCTCACACG
CGCCCTCGAGAATGTTGTTCAAGATGGGCTTGATCTTATGTGCAGCTTAT
GCTGCCCAAGCGTCGTCAAGCCAGCGAAAGTATGACGGCAGTACGCTAAG
CTACGATCCGAAGGTGGGACGGCCGGTATAATGAACATAAATTACCCAAG
GGTTCTCATCGCGCTCAAGCTAACACATAACACACCCCTGGGCCAGAGAA
CGATACTGCTGTACAGCGATATCGATATCGCAACAGAAGTGTTTGTGCGT
GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGGTCATGTTGGACACTTGTGGTCGAGAGCTTTCCAAAAACGATT
ATGTTGGCATCGCGCACTTCTTCGTTGCGATCGCGGTCCAGGAGGGCGTG
TTATCTACCGTAAAATGTAGGATACTGGTGGTGCTTAGGAGGGGTACACA
AACAGCAGTAGAGTGGTGGCTCCTTCTCCCGCTCGTTCTCACGGTGTGTC
CAGGCGATACGACCGTTTTCGGACTTCAAGACCTGGTCAGTTTGCATTGT
AGCTGATACTCTTCTTTTCTCTCTTGCTGTACAGTACAGCAGTACAAGTA
CTCGTGTTTTTTTTTTTTCATTTCTGCTGCAAACGTGGTCATACTGGGTG
TGTCTCAGGGGAGAATGTTCCAGGTGGAGTACGCGATAGAGGCCACCCGG
CGAGGCCGAACCGCTGTCGGCGTCTGCGGCGAAGATTGCGTGGCGCTCGT
GACGCGAGATCCGCCTTCGTCGTTGATACTCTTCTTTCCTCTCTTGCTGT
ACAGTACAGCAGTACAAGTACTCGTGTTTTTTTTTTTTCATTTCTGCTGC
AAACGTGGTCATACTGGGTGTGTCTCAGGGGAGAATGTTCCAGGTGGAGT
ACGCGATAGAGGCCACCCGGCGAGGCCGAACCGCTGTCGGCGTCTGCGGC
GAAGACTGCGTGGCGCTCGTGACGCGAGATCCGCCTTCGTCGTTGATACT
CTTCTTTCCTCTCTTGCTGTACAGTACAGCAGTACAAGTACTCGTGTTTT
TTTTTTCATTTCTGCTGCAAACGTGGTCATACTGGGTGTGTCTCAGGGGA
GAATGTTCCAGGTGGAGTACGCGATAGAGGCCACCCGGCGAGGCCGAACC
GCTGTCGGCGTCTGCGGCGAAGACTGCGTGGCGCTCGTGACGCGAGATCC
GCCTTCGTCGTCGCCGTCGAAACCTTCCTCGTGCCGCGCGGTGGCGGGGC
TCGACGGGGGCGGCGTGTGGGCTGTGGACACGCACGTCGGCATCACTGCT
TCCGGGTGAGCGGGGCAAAGAGGCCCGTGGGGGGAGAGAGGGGATGGATG
CTCTTTTGTTGCTTGTATCACGTAAGTATTGTGACCGTTGACCCACACAT
CCCTTCCGGGACGGAGCACCGTCGTTCTTACCCCTGTCGGAATCGCCACC
AACACTGTTGGGGCGGTTTGGTCACGTTTTTGCCGTTTTACACTTGTACG
AGGTACTTCAAGGGGTGGGCGAGTGTATACGAGTACTCATTTGTTGCTTG
CCCTCCTAATTTGACCATCGAGCAGCCATCATGAATCCCTTTTGAGCCGA
GTGCCGTTCGTTTCTGCTTCTGGAAGGTTCGCGACCACCATCTGGCCGCT
CTTTCCTTTTCTGCTACCAGACATATACACCCTACACACGACCGTGGGGT
GGGAAAGGTGACGGACGACATCTTATCATGTGATACTCCGAAGAGTGCAT
CAAACGAAATATTCGAGGTGCATTTCATCCTCATTGCTTTTGATGGCCTC
ACGCACATGGGCGGCGGCGTTTCTTCTCCTTTTTTTGCAGGTTACGGAGT
GACATTCAGTACGTCGTCGACTGTGCTCGGACGTGGTGTTCCGAACACCG
CTTTATCTTTGGCGCCCCGATGCCTTGCCACATTCTCGCCAGGTGATGGA
AAATCTAGGAAAATCGAACTGCTTGTTGCGTGGATAAAATGTGACCTGAC
CCGGCCTGTGGATAAAGGATAGTCGGGTGCGGAAGTGGCCTTCGTAAAGG
GCACACTCCCACGAACATCTGTCCAAGGCAGATCCCTCTTTTCACAAGGA
CACGAAATGGCATTTCGGCAGTTTGTAAGGTCAGATATGAGGGGTTTCCA
GAAAAATGGGCCGCCGACGACTCGGGGGTGCTACAGTAGGTTGTGTGTTT
TTTTCTTTTAGGCTCTCTTGTGTCGGCGCAACCGTGTCGTTTTTCCCTCT
ATTATAAAAAAAAACTTTTACATCCCAATCTCGATCAACCGGAAGCACGT
CCTTGCGCTTATTCGATCTTTTCCAACCCGTGCGCGGCGGCGAAGACGAC
CTCCGATCAAAAGTGAACAGTTCAGTGAACAGTCCACCCCCCTTTTGGCA
TTTGCATCTACTTCAACAGCAAAGTGCCACTATTCGGGTCAAAATCGCTC
GCAGCAGGTGTCGTACTTTGTGTGCAACAACTTTACTCCTCTCTGGTCAA
GCCCTCGTTCTTTTGGGGCGCGTGCGTGCTGTTGTACTGCTGTTACAGCG
GTTTCATTTTTTATTTTTCAATGGTACATTGCTGGTGTGCGCCGTTGTGT
GCATACAGTTCGCGCACGGCAAACACATATCATACCACTCACAAGTTTGA
TATTTCTGTAATGTTTGCTAATTACGTTGCTCATCTCTTGGCATCTAGGC
GACTGGCCGACCTAATCCATTCGTGCACTACCCGTGGCGGCAAGAGGCCT
CTGGCGGTTGATATCCTGCTGGGAGGTGAGAGACACGCCGGGAGTGTGGG
GGCTAGGGGGCGCTGCATAGATGACCGTGGCAGTTTATGGCTCCGTTTTT
GACAGTGATCCAAGTCTGGCGCCTTCGCAAACCAGGAGAGACTTGTGTAG
GTTTGGACACAGTCAGTTTCTATCCACGGGGAAGCAAACACGGCCAGCCC
ACCTCGCGCGGCGAGGAAAAATCATGGAACAAGTGCACACGGTCTGTCCC
TGAAAAACAAATTGCAGGTATTGGATAAAATCATACAAACGTGTAAAGAA
AAACGAGGTTTGGTTGCTCTGCCATATCGACGCGCTTGTAGCCTACCGTT
TTTTTTTTTTCCCACACACCCCTGTGTTGTTGTGGCGCTATTTATATGGC
TGCAAGCATTGAGCACCTGCCACGAATTACTTCGATTCACGGCAGTTCAT
CAGGCCACGACGGCAAACTTATCAGAAACGATGCAATGGCCATGACAAAC
GCACTTTGAGTTGCTAATTTTTTTGTCTATTTTATTCTGTTTATTTTTTC
ACCACTTTTCATCGATCCAGCAAGGTGGCCGTTTTCCCCACGCCATCCAC
CGTGTGTAGATAGCACGCAGTAGATAGAAAAGATATCGCCATGAATGCAC
GGCTCTGCAATGTCCTTGGTGAGGAGTTGAGTAATGGCTCGTCGCGCCGC
CTCCGCCGTCCAGTGATGCATTTTACCCGTTTTTCCCCTCGCCTTTCCTC
GCCGCTCTGCGCCCCCCCCCACCCCTGCTCCAGGGACTGACGAGCACGCT
GGTGCCAGCCTTCACCAGGTTCAGGCGACAGGAGCGTTCCAGCGGTACCG
AGCAGTGGCCGCGGGCGGGGGCGGGGTGGAGGCTACCGCCCGCCTTGCAT
CAGCAGTAGCAGCAGCAGCAGCAGAGCGAGCGCAAGAGGAAGAGTCGGTC
CGACGCCGAAAGGGTCGAGGCACTTCACCAGGGGATGCGATGAACAGGAG
GAGCGTTCCCGCCGATCCTGCCACGGTTGTCGACAGAGTTGTTGGCGGGG
TTTCCGGCGGTGAAGGCCGTGGTGACGGGGGCGAGGATGACGTCGAGGAC
GACACAAAAACAGCAGCAGCAGCAGGGGATACTGACGGAGCGGGGGAAGC
AGCAGGAGAAGCAAGAAAAGGCTGGTTGGGGGGGGAGAGAGAAGGGGAGG
ACAGGCGTCGCCGCCGCCGCCCGCTCGAGCCCGAGCATCGCGAGGCCCTA
AAGCGCGCTGTTTCGGCGTTGTGGAAGCCTTCGATTGGTGGCGGTGGTGG
TGGTGGTGTAGGTCGTCGGGGTAATGGCGCCAGCTATTCGGCTGGGAGGA
ACGAGCGCCGAGAATACGGAGAAGACGAACACGGGAAAAGGCGTGGAGGC
TTACGGGCTTCAGAATTGTCGGCTGCGATTTACGGCGGCGGCGGCGGGGG
CGGTGTGGACGGAGAATGGGATGGGGAGGACGGGGAGAGGGAGGGGGCGT
GGGAGCAAGGGGTCGGGTGCACACAGGAAGATTTTGAAGAGATTTTGCTT
GAGCTGCAGGCGGAGGAGGAGGAGGAGGAAGAGCAGTGAAAAAGAGAGTA
AAACTTGCGCCGAAAGTACAACGTGTGGAAGTATTCGAGCATCGCGTACC
ATGGTGTTCATTGAACCACGGTCTTCTCCAACATCCTCGTCCGCTGCCCT
GCTCGTCAGCGGCATCTTTTGCTGCCATACTGGTTGCGTTATGCTTCTAT
TTTAATTCCTACTAGTGTTGTAGCAGAAACGGCAGCAGTTCCAACTAAAT
AGGTTCGTCCGTCACAGAGCGAGAGAGTGCTATCATACCCTCTTCCCGCC
GGTAAGCGGGGCGCGATTCGAGGCGTGGGGATGGAGGTGAAGGCGAGGTT
GGAGGTAGGATAGGAGGCAGGGACATCGAAACCAATGGAACTGGGCCCCC
TGACAGCTTTTGACCACCGAGTTTCCTCCATGACTACTGTTGCTCTGATG
CAAGGCGGGATATTTTTCCTCGCTCTGTCTGTCACGGAATGGTCCCGTAG
CGGTAGATTGTCGGGTGTGAAAATTATGTATACCCGTAATCATGCCAGTC
ATCGCACCCCCGTGTTAGCTTTTTTGCATTCCGTATTGCTCCATAACCAG
GAGAGTGCGAACACCAAACAACCCGTCATACGAAAGCTCTCGACGAGATC
TTTCCAAAACCACCCTTTTCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig863:94157..99177-

>mRNA_P-littoralis_Contig863.28.3 ID=mRNA_P-littoralis_Contig863.28.3|Name=mRNA_P-littoralis_Contig863.28.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1290bp|location=Sequence derived from alignment at P-littoralis_Contig863:94157..99177- (Pylaiella littoralis U1_48)
ATGTCTCTCTCACACGCGCCCTCGAGAATGTTGTTCAAGATGGGCTTGAT
CTTATGTGCAGCTTATGCTGCCCAAGCGTCGTCAAGCCAGCGAAAGTATG
ACGGCAGTACGCTAAGCTACGATCCGAAGGGGAGAATGTTCCAGGTGGAG
TACGCGATAGAGGCCACCCGGCGAGGCCGAACCGCTGTCGGCGTCTGCGG
CGAAGACTGCGTGGCGCTCGTGACGCGAGATCCGCCTTCGTCGTCGCCGT
CGAAACCTTCCTCGTGCCGCGCGGTGGCGGGGCTCGACGGGGGCGGCGTG
TGGGCTGTGGACACGCACGTCGGCATCACTGCTTCCGGGTTACGGAGTGA
CATTCAGTACGTCGTCGACTGTGCTCGGACGTGGTGTTCCGAACACCGCT
TTATCTTTGGCGCCCCGATGCCTTGCCACATTCTCGCCAGGCGACTGGCC
GACCTAATCCATTCGTGCACTACCCGTGGCGGCAAGAGGCCTCTGGCGGT
TGATATCCTGCTGGGAGGGACTGACGAGCACGCTGGTGCCAGCCTTCACC
AGGTTCAGGCGACAGGAGCGTTCCAGCGGTACCGAGCAGTGGCCGCGGGC
GGGGGCGGGGTGGAGGCTACCGCCCGCCTTGCATCAGCAGTAGCAGCAGC
AGCAGCAGAGCGAGCGCAAGAGGAAGAGTCGGTCCGACGCCGAAAGGGTC
GAGGCACTTCACCAGGGGATGCGATGAACAGGAGGAGCGTTCCCGCCGAT
CCTGCCACGGTTGTCGACAGAGTTGTTGGCGGGGTTTCCGGCGGTGAAGG
CCGTGGTGACGGGGGCGAGGATGACGTCGAGGACGACACAAAAACAGCAG
CAGCAGCAGGGGATACTGACGGAGCGGGGGAAGCAGCAGGAGAAGCAAGA
AAAGGCTGGTTGGGGGGGGAGAGAGAAGGGGAGGACAGGCGTCGCCGCCG
CCGCCCGCTCGAGCCCGAGCATCGCGAGCCTTCGATTGGTGGCGGTGGTG
GTGGTGGTGTAGGTCGTCGGGGTAATGGCGCCAGCTATTCGGCTGGGAGG
AACGAGCGCCGAGAATACGGAGAAGACGAACACGGGAAAAGGCGTGGAGG
CTTACGGGCTTCAGAATTGTCGGCTGCGATTTACGGCGGCGGCGGCGGGG
GCGGTGTGGACGGAGAATGGGATGGGGAGGACGGGGAGAGGGAGGGGGCG
TGGGAGCAAGGGGTCGGGTGCACACAGGAAGATTTTGAAGAGATTTTGCT
TGAGCTGCAGGCGGAGGAGGAGGAGGAGGAAGAGCAGTGA
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