mRNA_P-littoralis_Contig861.7.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.800e-54 Identity = 95/187 (50.80%), Postives = 117/187 (62.57%), Query Frame = 1
Query: 1 RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRTSTAMLVKQGEGPKAREVMLWPATREVAG-----EKEQRMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPFWELRAPKDVMEVIYHGECAWKENDDGGQGWE 546
+ +N LK ++ E + G+S T H W+Q +GFRWRRHRKCVY DGHNRPD ++ R YV M + T L K GEGP+A EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPP + L P++VMEV+YH ECA+K+ND GG WE
Sbjct: 102 KHLNDTALKPYMEEGARGISFDTVHRWLQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQNDSGGAAWE 288
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.490e-53 Identity = 95/185 (51.35%), Postives = 116/185 (62.70%), Query Frame = 1
Query: 7 INTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRTSTAMLVKQGEGPKAREVMLWPATREVAG-----EKEQRMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPFWELRAPKDVMEVIYHGECAWKENDDGGQGWE 546
+N LK ++ E + G+SL T H W+Q +GFRWRRHR CVY DGHNRPD ++ R YV M + T L K GEGP+A EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPP + L P++VMEV+YH ECA+K+ND GG WE
Sbjct: 462 LNDTALKPYMEEGARGISLDTVHRWLQDLGFRWRRHRNCVYADGHNRPDNIRRRTGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVSESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQNDSGGAAWE 646
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5K7H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H4_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.000e-36 Identity = 67/130 (51.54%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 40 EDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRTSTAMLVKQGEGPKAREVMLWPATREVAG-----EKEQRMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWAT 414
E + G+SL T H W+Q +GFRWRRH+KCVY DGHNRPD ++ R YV M + T L K GEGP+A EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T
Sbjct: 3 EGARGISLDTVHRWLQDLGFRWRRHQKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLDELPVDERLELWCT 132
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5JR89_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR89_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.550e-21 Identity = 79/225 (35.11%), Postives = 107/225 (47.56%), Query Frame = 1
Query: 1 RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRT--STAMLVKQGEGP-----------------KAREVMLWPATREVAGEKEQR-MHVELA----GECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPFWE-------LRAPKDVMEVIYHGECAWKENDDGGQGWENDGKGAAMKQKG 582
W+NTVLLK+ V G+S T H+W+ +GFRW++ KCVYVDGHNRPDVV+ R+ YV ML +R S ++++ G+G K E + WPA R V GE E + +HV G+C K VS + R R P P L +V+ + +H E KENDDG W + KGAA+K+KG
Sbjct: 472 EWVNTVLLKE-VFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSIDLVMRDGKGDYSLVPDLQVRDLYVAKKKKEEALFWPARRIVDGETEYKHVHVHDGERPYGDCVRIK---PNALNVSHRCECRDCKRKPFDSSSRVPFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAIKKKG 692
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.010e-20 Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 304 MHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPFWELRAPKDVMEVIYHGECAWKENDDGGQGWEN 549
MHV+L GEC WEK HN TSG + E++ LW T R PA PLPP + L P++VMEV+YH ECA+K+ND GG WEN
Sbjct: 1 MHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQNDRGGAAWEN 82
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 9.550e-19 Identity = 51/102 (50.00%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 202 TSTAMLVKQGEGPKAREVMLWPATREVAG-----EKEQRMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPFWELRAPKDVMEVI 492
T T L K GEGP+A EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPP + L P++VMEV+
Sbjct: 48 TLTCRLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVV 149
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5L796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L796_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 3.280e-17 Identity = 51/134 (38.06%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 1 RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRTSTAMLV-----KQGEGPKA--------------------REVMLWPATREVAGEKEQRMHVELAGE 327
RW+NTVLLK+ V G+S T H+W+ +GFRW++ KCVYVDGHNRPDVV+ RQ YV ML +R ++++ + + P+ + + WPA R A KE HV + GE
Sbjct: 81 RWVNTVLLKE-VFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARQEYVAKMLILRKMMSIVLXVTMARVRDAPEGGXXXXXXXXXXXVVEGWATGSDPLFWPAVRSTADGKEDVKHVLVHGE 213
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5K230_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K230_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.050e-16 Identity = 50/136 (36.76%), Postives = 68/136 (50.00%), Query Frame = 1
Query: 4 WINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVR--------TSTAMLVKQGEGPKA--------------------REVMLWPATREVAGEKEQRMHVELAGE 327
W+NTVLLK+ V G+S T H+W+ +GFRW++ KCVYVDGHNRPDVV+ R+ YV ML +R T + + + P+ + + WPA R A KE HV + GE
Sbjct: 36 WVNTVLLKE-VFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSIPVQVETVTMARVRDAPEGGXXXXXXXXXXXVVEGWATGSDPLFWPAVRSTANGKEDVNHVLVHGE 170
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.120e-15 Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVR 201
+WIN LLKD + + GVS RT H WMQ +GFRW RH KCVYVDGHNRPD+V R+ +V +L R
Sbjct: 367 KWINEELLKDELA-GTKGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDIVNDRRGFVAYLLGPR 432
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Match: A0A6H5J7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7G3_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.480e-15 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPDVVKHRQTYVQTMLAVRTSTAM 216
RW+NTVLLK+ V G+S T H+W+ +GFRW++ KCVYVDGHNRPDVV+ R+ YV ML +R +M
Sbjct: 578 RWVNTVLLKE-VFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSM 648 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig861.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig861.7.1 >prot_P-littoralis_Contig861.7.1 ID=prot_P-littoralis_Contig861.7.1|Name=mRNA_P-littoralis_Contig861.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp RWINTVLLKDFVTEDSPGVSLRTKHAWMQAVGFRWRRHRKCVYVDGHNRPback to top mRNA from alignment at P-littoralis_Contig861:59258..60005- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig861.7.1 ID=mRNA_P-littoralis_Contig861.7.1|Name=mRNA_P-littoralis_Contig861.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=748bp|location=Sequence derived from alignment at P-littoralis_Contig861:59258..60005- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig861:59258..60005- >mRNA_P-littoralis_Contig861.7.1 ID=mRNA_P-littoralis_Contig861.7.1|Name=mRNA_P-littoralis_Contig861.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig861:59258..60005- (Pylaiella littoralis U1_48)back to top |