mRNA_P-littoralis_Contig861.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig861.5.1
Unique NamemRNA_P-littoralis_Contig861.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 4.220e-86
Identity = 151/309 (48.87%), Postives = 181/309 (58.58%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA---------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            +F  FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K          K G  SE  + V KG                                            GE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD  D VL
Sbjct:  352 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 8.030e-82
Identity = 152/323 (47.06%), Postives = 181/323 (56.04%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA-----------------------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            +F  FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K                        K G  SE  + V KG                                            GE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD  D VL
Sbjct:  786 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 3.100e-81
Identity = 150/357 (42.02%), Postives = 181/357 (50.70%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA---------KEGDGSECYVVVGKG--------------------------------------------------------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            +F  FE+SR+PGRQML +FDNSTGH AY PDAL AQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K          K G  SE  + V KG                                                                                            GE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD  D VL
Sbjct:  111 IFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.380e-70
Identity = 133/296 (44.93%), Postives = 159/296 (53.72%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKA-----------------------KEGDGSECYVVVGKG--------------------------------------------GEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 630
            +F  FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K                        K G  SE  + V KG                                            GE  +   +GEGD+                   RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct:  221 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 4.110e-58
Identity = 111/237 (46.84%), Postives = 134/237 (56.54%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKAKEGDGSECYVVVGKGGEDTEPDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            +F  FE+SREPGRQML +FDNSTGH AY PDAL AQN+ A  GG+Q  PR F + GR I T F EG VL F ++P  +K                   TE +  G   T R  + F                                       +R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD  D VL
Sbjct:  162 IFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARK-------------------TEAEAVG---TTRSSMLF---------------------------------------QRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.950e-50
Identity = 110/262 (41.98%), Postives = 131/262 (50.00%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVHEGRRISTVFEEGSVLLFDTNPTPKKAKE-----------------------GDGSECYVVVGKG--------------GEDTEP---------------------DRQGE---------------------------GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSL 531
            +F  FELSREPGRQML +FDNSTGH A+ PDAL AQN+A  AGG+Q  P  F + GR I T F+ G  L F T P  +K +E                       G  SE  V + KG              GE   P                     ++ GE                           G +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERRVCDYSV+SL
Sbjct:  199 IFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 5.170e-49
Identity = 114/342 (33.33%), Postives = 157/342 (45.91%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVH-EGRRISTVFEEGSVLLFDTN-------------------------PTPKKAKEGD--------------------------GSECYVVVG-------------------------------KGGEDTEP--DRQGEGDT--------------------RRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            L  + EL+ EP RQ++ +FDNSTGH+A+G  AL  ++VA   GG Q   R F   EG  + T F  G  L F TN                         P  K  K G                           G +  + +G                               +GGE  +   D  G+G+                     RRCC+  VLS L AF+E+ N VE++F+A GH C+FL KYHPE N+IER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++YRDLK+W  HR +T R DAV+
Sbjct:  382 LIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLWEGEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 723          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 9.540e-49
Identity = 117/344 (34.01%), Postives = 156/344 (45.35%), Query Frame = 1
Query:    1 LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPRPFVH-EGRRISTVFEEGSVLLFDT--------------------NPTPKKAKEGDGS----------------------------------------------ECYVVVG-------------KGGE-------------DTEPDRQGE--------------GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            L  + EL+ EP R ++ +FDNSTGHAAY   AL A ++  G GG QA+   F+  EG  + T F  G  LLF                      NP  KK + GD                                                EC    G             +GGE             +T+ +  G               G   RCC+  V + L AFK + N++E++F+ AGH CIFL KYHPE NAIER WG+ K + R  C+YS+K +LK LP  LS + L  +R W+R++WLY+EAY  GL  Y++ RDLKKW SHRS T+R D+V+
Sbjct:  956 LIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAEEEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVV 1299          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 8.180e-46
Identity = 87/185 (47.03%), Postives = 113/185 (61.08%), Query Frame = 1
Query:  169 RRISTVFE---EGSVLLFDTNPTPKKAKEGDGSECYVVVGKGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            R+  T F    EG   + D     K   E DG E    VG G         GE G  RRCC+  VLS L AF+E+ N VE++F+A GH CIFL KYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++YRDLK+W  HR +T R DAV+
Sbjct:  125 RQAITAFNRGVEGRQQVVDN----KGQGEEDGGEDGASVGSGA-------AGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298          
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.310e-44
Identity = 85/200 (42.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  145 PRPFVHEGR--RISTVFEEGSVLLFDTNPTPKKAKEGDGSECYV-VVGKGGEDTEPDRQGEGD--------TRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL 711
            P P VHE R  R        ++  F+          G+G +  V   G+G ED   D    G          RRCC+  VLS L AF+E+ N VE +F+A GH CIFL KYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WLY+EAY  GL+ Y++  DLK+W  HR +T R DAV+
Sbjct:   10 PTPRVHECRACRAEKAATRQAITAFNRG--------GEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig861.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2M3_9PHAE4.220e-8648.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7W4_9PHAE8.030e-8247.06Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7K1_9PHAE3.100e-8142.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K344_9PHAE1.380e-7044.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8V9_9PHAE4.110e-5846.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGB3_9PHAE1.950e-5041.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L669_9PHAE5.170e-4933.33Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ42_9PHAE9.540e-4934.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR66_9PHAE8.180e-4647.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKI5_9PHAE1.310e-4442.50Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig861contigP-littoralis_Contig861:56980..58424 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog588596.U9UK42
Model size711
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.71e-28
EggNOG OGs29JY0@1|root,2RT6R@2759|Eukaryota,39VBJ@33154|Opisthokonta,3P12S@4751|Fungi
Cds size711
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791737.089885-CDS-P-littoralis_Contig861:56979..572501680791737.089885-CDS-P-littoralis_Contig861:56979..57250Pylaiella littoralis U1_48CDSP-littoralis_Contig861 56980..57250 -
1680791737.106304-CDS-P-littoralis_Contig861:57369..575461680791737.106304-CDS-P-littoralis_Contig861:57369..57546Pylaiella littoralis U1_48CDSP-littoralis_Contig861 57370..57546 -
1680791737.1212783-CDS-P-littoralis_Contig861:58161..584241680791737.1212783-CDS-P-littoralis_Contig861:58161..58424Pylaiella littoralis U1_48CDSP-littoralis_Contig861 58162..58424 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig861.5.1prot_P-littoralis_Contig861.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig861 56980..58424 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig861.5.1

>prot_P-littoralis_Contig861.5.1 ID=prot_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
LFVVFELSREPGRQMLNIFDNSTGHAAYGPDALTAQNVAAGAGGQQAVPR
PFVHEGRRISTVFEEGSVLLFDTNPTPKKAKEGDGSECYVVVGKGGEDTE
PDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEIFEAAGHRCIFLQKYHP
ECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARIS
WLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVL
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mRNA from alignment at P-littoralis_Contig861:56980..58424-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig861.5.1 ID=mRNA_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1445bp|location=Sequence derived from alignment at P-littoralis_Contig861:56980..58424- (Pylaiella littoralis U1_48)
TTGTTTGTGGTGTTCGAGCTGTCTAGGGAGCCCGGTCGACAGATGCTCAA CATCTTCGACAACTCCACCGGGCATGCAGCCTACGGCCCCGATGCCTTGA CGGCGCAAAACGTCGCCGCAGGCGCGGGGGGTCAGCAGGCAGTCCCGCGC CCGTTTGTTCACGAAGGCCGACGGATATCTACAGTGTTCGAGGAGGGCAG CGTGCTTTTATTCGACACGAATCCAACCCCCAAGAAGGCAAAAGAGGGAG ATGGCAGTGAGTGGTGATAGAGTTTAATTTTGCGCTAAAACATTGTCTAG ACGCTGCACCCTTGGCTTGTATGCTAAGAGACTGACGATATTGTCTCTGG CGTGAGGGACTGTCATGAAAGCAAGGCGGCTCCAGCCCAGCTAATTTTGT GGCTTGATTTACATAAATATGTTGGACTCGCGGAAACGATACATTGTCAA ACAAATGAATGCGACCCTCATTTTGTGATGCACCAACCGGCACAGGAGCC GCTCAAAAGCTGGGCAAGTTCAAGAAGGGAGACAAGGTCACGCAGGACGG GAAAGCGTGGAAATGTCTAGGACTCGCCAGAGGAGCGAAGGAGCTTTTAC AAGATTGTGGGTTGTACAAGCTCCCCGGCGAAAGAAAGGCGCCGAAGCTT GCGTGCAAAAGGTGAGTTGTGGATGGTGGTGTCTGACAGGTATACTCAGT GGTTGATTGCTTCGCTATCCTGTGCTGTTCTGAAAAAGGAAGGGCTTTGT CACCTTTAAAATGAAACTGGTGCCCGTTGTGATTTTTTTGCCAAGGTGTA CCGCCGAGGCGAAAGCCTCGGCGGAGCAGAAGAAACACTACAACGAGGGA GGAGAAGCGCGGGCATCATCGCTGGTAGCTACGTAGTGGTAGGGAAGGGG GGTGAAGATACGGAACCTGATCGGCAAGGGGAGGGTGATACTCGACGCTG TTGCCTCCGGTTCGTACTCAGCAATCTGCCGGCATTCAAAGAACAGAAGA ATCGCGTGGAGGAGATTTTCGAGGCAGCCGGACATCGGTGTATCTTCCTC CAAAAGTAAGTGTTTTCGCATATCGATCATGAGGTATTTTCTGAAGTGGC ACATGATTTTAACCGACTTGTATACGAATAACTAAGAAGACCGCTGCACG TCTCCGTGAATTTTCCTTCTCCAGGTATCACCCGGAGTGCAACGCCATCG AGCGAGTCTGGGGGCACTCTAAGGCCATCGAACGCCGGGTGTGCGATTAT TCCGTCAAGAGTCTTCTAAAACGACTCCCTGCCACCCTTAGCTCCATGTC TCTGTCGCTCATTCGCAAGTGGGCCCGGATTTCGTGGCTCTATGTTGAGG CGTATGCCACGGGGCTTGACGGTTACATGCAATACAGAGACCTAAAGAAG TGGACGAGCCACCGCTCATCTACTGATCGGGTTGATGCCGTGTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig861:56980..58424-

>mRNA_P-littoralis_Contig861.5.1 ID=mRNA_P-littoralis_Contig861.5.1|Name=mRNA_P-littoralis_Contig861.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=711bp|location=Sequence derived from alignment at P-littoralis_Contig861:56980..58424- (Pylaiella littoralis U1_48)
TTGTTTGTGGTGTTCGAGCTGTCTAGGGAGCCCGGTCGACAGATGCTCAA
CATCTTCGACAACTCCACCGGGCATGCAGCCTACGGCCCCGATGCCTTGA
CGGCGCAAAACGTCGCCGCAGGCGCGGGGGGTCAGCAGGCAGTCCCGCGC
CCGTTTGTTCACGAAGGCCGACGGATATCTACAGTGTTCGAGGAGGGCAG
CGTGCTTTTATTCGACACGAATCCAACCCCCAAGAAGGCAAAAGAGGGAG
ATGGCAGTGAGTGCTACGTAGTGGTAGGGAAGGGGGGTGAAGATACGGAA
CCTGATCGGCAAGGGGAGGGTGATACTCGACGCTGTTGCCTCCGGTTCGT
ACTCAGCAATCTGCCGGCATTCAAAGAACAGAAGAATCGCGTGGAGGAGA
TTTTCGAGGCAGCCGGACATCGGTGTATCTTCCTCCAAAAGTATCACCCG
GAGTGCAACGCCATCGAGCGAGTCTGGGGGCACTCTAAGGCCATCGAACG
CCGGGTGTGCGATTATTCCGTCAAGAGTCTTCTAAAACGACTCCCTGCCA
CCCTTAGCTCCATGTCTCTGTCGCTCATTCGCAAGTGGGCCCGGATTTCG
TGGCTCTATGTTGAGGCGTATGCCACGGGGCTTGACGGTTACATGCAATA
CAGAGACCTAAAGAAGTGGACGAGCCACCGCTCATCTACTGATCGGGTTG
ATGCCGTGTTG
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