mRNA_P-littoralis_Contig86.61.74 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig86.61.74 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI) HSP 1 Score: 1051 bits (2717), Expect = 0.000e+0 Identity = 995/2163 (46.00%), Postives = 1144/2163 (52.89%), Query Frame = 3
Query: 360 MSWLGGSPKRHGSKDKAAQGSGVKGLWSSSTTRTYGSSRRPTSSLRGSAVPSSN-GARFRGSRTAAADGAEAGGGLMGVGG-GLSSTYEGEEGAKSPLPRDSVSIWSKLSPGFDSSPIEL-SFPQRGLDLDLESPDDSCGA-------PAAAGKAGGRGKAKKPATRTRGGANRTRATAATAPGSSDDPTAIMREAMAXXXXXXXXXXPKRKVPGARKIRGVKGAGVCGDDDGAGAGSAAASIEILSIDPAEDEGFATSGTEGGKPQASPSA----RRDRSPTRRGAGRPDRGGDRSVGGERWTMRKPASPLSSPLRPITNYTSEGDRPARTKAKVDGVRSSAAVPETMSXXXXXXXXXXXXXXXXXXXXXXXXEWQDAGMDFTKHLSKTENTSAKVRKKEASSHGPNAEPDRRRRKGDSKGTRATAIPAALGTRSSGRDKTRAASTAAAEADDTQGGAKADKWLPSASGSKRSDRQDSGDMDALDKSEDEQHLAGRHPVPRPLLSPGGSGLVPLEVKLSLDSSAEGILVGDKRRRGKRGARTVEDSAHRSSRSRHLSPLIPVSGGFVKHGFSVEEEDESELDDAVVEAKSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVLKRAASVATGLKGDQSSAPAPAMTTSPALAGLNRRSDRNSVVETYAEAEVSAATALRQAASVEDFAGVKWGDDSPPARLSRSLSASVPSATTAWGGXXXXXXXXTGCAKFTRSSHRRRSRANSTSSPLPVLETSASLPTGGVGLEDAAAGV--EWTTRSFGSGGFARHGRRRSYGGDGGSGGSTENIPKKALREGPAAYGS---APLARSHRMPAWNQGNVLKSIDRPTSLPSGIAQRAIIPGVEGLAGGDASCIGGDAGFGWVLRSPGAPLNHRRRSQSFAGG-RASMARSRSASNSSSFASVSGARERPPGLPGASD-DEYGFHDAWTSQVLEGHEQGPIIGDAAEDNDAGMSPAQTPRASPSKGGTSAALRRAHGLSSMARRMDRLEIRSPDVETHAAEAQLEIMGNPVSDSVDRSSA---AAAPVETCSGTPVHPRIASMPTHVTPVGNWN-ATYERSRLSGAGGSPTECLRDYLSGLQGKEEEDEEVRFLLSGVGEAKHNGEPQAFKTLSAVATPSAPASNSPPGITFTRSAAPGLPSPIFAGIFRD-DSGRSLRHADGYTPLDGDPAASSSGTVGVAPSGSDAKAEQPSDGGGNXXXXXXXXXXXXXXXXXAGVAGAAAIERDPPQAPRGSKFGVGDKARSIPVCGSQGSPEGGFLIRRKTLGTPSCTSS--SSTSWPKAYGGEAQDXXXXXXAEPPKLGRLGSSGGSRSSXXXXXXXXXSSLYMSCLGSGRSSKSPDEEYEADVARHG--RSMSSP--VPLTEADFETSSVLGISSGVRRPESQAAVGEAAGD------QGLDPTSGILSTLASASAGNNNRYNFVFRCCCRRLCHLLTRVRLPSL--PAVTASGVSDRG-SRRTSTESVGATTSRAQFETPQAENKLKWGSQPQFGDWGTSQPASAGSLRHLASRLTAFV----GRSSNGGRDSGDDW----------SPGMH---ATVGASLGYVTTPLADLP---LLPPPRAAAATPGSTISLTGGGGIGSLLAYRNSLGSVSEWEHGGSGAG--GG---DGAVISSGAEEAFDGLPEEEDLEERDLFAEG--GPGVEGMRALWDSTTSGDGGTRRREGSIGVGRGGRGRDRLSSVMMTEGQRDKQRRRQSKAKRRRVSLSIKQQSRRTSS-VGLTSRLAGLSLLEAAEASSPGPGKVEPRPRLSPFPKMEAFTGGAISEGEEEDXXXXXXXXXXXXXXVLQPTPLSKSTQ---SWLHQ--ASPMSVEKSREASQ--NRGRPFEEGRGETPPKVREDLEKSMTELNNLSLSICNSEVFGSYCALLLPRLFMSTGRTSCCTYALMPPGLPSLLEKEDGSPAKPPS---------NSSKDFLLHLDSTS--PMMTPTTKPLSWSKTG--AGATTSSLFTDTEADPAPDAGSDAIGSSSGVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSTESALEALRRPGVMAKALRMLSVDELLGDVPLVCAAWRKAAVYAFAEVASDM 6581
MSWL GSPK GSK K A GS +GLWSSSTTRTYGSSRRPTSSLRGSA G FRG A AGGG G+ GLSS Y+ E KSPL DS++ S+ SP DSSPI L SF +RGLDLDLESP DS P T G + P +A A PKRKVP ARK R A S +A I +S ++EG EGG+P+AS S+ RR+RSPTRRGAGRP+R DR GGE R P+SPLSSPLRPITNYTSEGDRP RTKAKV G ++ A XXXXXXXXXXXXXXXXXXXXXXXX W+D GMDFT+ S + V G +GFSVEEE++SELDDAV++A D XXXXXXXXXXX X +LKRAA T LK SPAL GL+RR R + T+ E A AL QA+SVED A WGDDSPPARLSRSLS S SA +AW G XXXXXX K TRSSHRRRSRANSTSSPLPVLE SAS+PTGG+GL DA A ++T RSFGS RH RR S GG GS + I K A R+ S APL+RSHRMP++N GN L++ RP SLP GI +R G E + G +A IGGDAGFGWVLRSPGAP + RRRS+SFAGG R S +RS SN +S GA + PPGL GA+ D YG W + E G + A D D M+PAQTP+ASPS G SAA+RRAHGLSS+ARRMDRLEIRSP VETHAA+AQLEIM + D+ + A + GTP PRI+S+P H TPVGN N A ERSRLSGAGGSPTEC RDYLSGL GKEEE+++ L GEAKH G +A KT SAVA +SPPG+T TRS A GLPSPI AG+F D D+ +L+ +TP G VA GS A + GG XXXXXXXX G A R A +G+K G+G KA+++P G++ SPEGGFLIRRKTLG +SS SSTSWPKAY G+ ++ AEPPKL RL S GSRSS SLY+SCL SG + +SP E +A+VA H RS+SSP VPL +F+T S G S+ V+R + AA E A QGLD T +T +++ + +R +R R P+L PA +SG+SDRG +RRTSTESVGATTSR QFETPQ E KLKWGSQPQ+GDWG SQ ASAGSLRHLA RL AFV GR ++GGRDS SP MH +T L VTTPL DLP LLPPP+A TPGS+ G G GSLLAY NSLG+VSE E G SGAG GG DG G F G+ E LEE D+ AE G G M+ALWD + GD G RRR+GS+GVGRG RGRDRLSS+MMTEGQ SRRTSS VGLTSRLAGLSLLE AEASSPGPGK+EPR RLSP+PK AF GGAIS XXXXXXXXXXXXXX+LQ P K TQ SW Q ASPMSVE+ +Q +R RP E+GR ETP KVREDLEKS+TELNNLSLSICNSE S P+ E++ +P ++ D L LDS+S P+ TTK S G G ++ IG ++G AV STESALEALRRPGVMAKALRMLSVDELLGDVPLVCAAWRKA+VYAFAEVASDM
Sbjct: 1 MSWLEGSPKHQGSKAKPAPGSSARGLWSSSTTRTYGSSRRPTSSLRGSAASGPKAGGLFRGHTPAGG----AGGGQYGLTRVGLSSAYD--EDPKSPLGDDSLA--SRASPELDSSPIVLTSFAKRGLDLDLESPGDSXXXXXXXXXXPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTPKGEAGTPAMEEVDAPAPA--------PKRKVPAARKTR----AAXXXXXXXXXXXSDSAVISEIS-GTGQEEGVVA---EGGRPRASSSSQQSVRRERSPTRRGAGRPERWADRGGGGES-AGRGPSSPLSSPLRPITNYTSEGDRPPRTKAKVAGAKTCATA--AXXXXXXXXXXXXXXXXXXXXXXXXXXXWRDDGMDFTRSAS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNVGNG---NGFSVEEENDSELDDAVIDATGDDSDXXXXXXXXXXXSSTDVIPRPKPPCPTTTTAGSAPAVASSTXS---------------ILKRAAPDPTDLKAHXXXXXXXXXX-SPALVGLSRRPRREAQRVTHGEKR---APALAQASSVEDLARGGWGDDSPPARLSRSLSLSQTSAPSAWHGAAXXXXXXXXXXKVTRSSHRRRSRANSTSSPLPVLEMSASMPTGGIGLSDATAVAREDFTARSFGSVASLRHRRRGSLGG--GSXXXGDGI-KHARRKSSCEVSSGSNAPLSRSHRMPSFNHGNSLRNPGRPVSLPQGIMERGSRRGGEEIPG-EALSIGGDAGFGWVLRSPGAPPDDRRRSKSFAGGARPSATHARSDSNPVR-SSGGGAAQYPPGLAGAASVDMYGLSGEWARRDSGEQESGMFV---AGDKDEEMAPAQTPQASPSDTGDSAAMRRAHGLSSVARRMDRLEIRSPAVETHAAQAQLEIMADSTGDNPGHGHSIPEATTSLGGSDGTPSRPRISSLPAHYTPVGNSNVARNERSRLSGAGGSPTECFRDYLSGLHGKEEEEDDEELL----GEAKHEG--KAPKTPSAVAXXXXXXXHSPPGVTCTRSTALGLPSPILAGLFGDADNSHALQTDASFTPRAGS----------VASGGSSGAAVDGAPGG--------XXXXXXXXEAVXGEXXVGATGRGASLARKGAKLGLGAKAKTLPARGTRASPEGGFLIRRKTLGNAPSSSSFASSTSWPKAYAGQGREDDTA--AEPPKLERLSS--GSRSS----------SLYLSCLSSGEAVQSPGEGQQAEVAPHQQQRSISSPLSVPLMVKEFDTPSASGSSACVQRARAAAAYNEGAAGVSGTDKQGLDATDSRSTTDPTSAGRDKDRDRD-------------SRYRSPALGAPAAASSGMSDRGGNRRTSTESVGATTSRTQFETPQPETKLKWGSQPQYGDWGISQRASAGSLRHLAGRLRAFVDRATGRRASGGRDSDGXXXXGDLPMSMASPVMHGSASTAETPLEGVTTPLPDLPDLPLLPPPQA---TPGSSKG-GGAGDSGSLLAYGNSLGAVSEREGGRSGAGVKGGETEDGXXXXXGY---FGGIAGSEGLEETDVCAEEREGLGAAEMQALWDPSVFGDDGLRRRDGSVGVGRGRRGRDRLSSLMMTEGQXXXXXXXXXXXXX--XXXXXXXXSRRTSSSVGLTSRLAGLSLLEVAEASSPGPGKMEPRSRLSPYPKAAAFAGGAISXXXXXXXXXXXXXXXXXXXXMLQAVPTPKPTQGQRSWSSQGLASPMSVERPAWPNQERDRDRPREDGRAETPAKVREDLEKSLTELNNLSLSICNSEENDS----------------------------PAKHERQXXXXXRPSKTDDTSYDSGSAGADILAGLDSSSSSPVAIATTKASSLPTLGLDCGGVADTVLR--------------IGDTTGPPAVV-----------------------------------STESALEALRRPGVMAKALRMLSVDELLGDVPLVCAAWRKASVYAFAEVASDM 1797 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.61.74 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.61.74 >prot_P-littoralis_Contig86.61.74 ID=prot_P-littoralis_Contig86.61.74|Name=mRNA_P-littoralis_Contig86.61.74|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2094bp MSWLGGSPKRHGSKDKAAQGSGVKGLWSSSTTRTYGSSRRPTSSLRGSAVback to top mRNA from alignment at P-littoralis_Contig86:163436..181601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig86.61.74 ID=mRNA_P-littoralis_Contig86.61.74|Name=mRNA_P-littoralis_Contig86.61.74|organism=Pylaiella littoralis U1_48|type=mRNA|length=18166bp|location=Sequence derived from alignment at P-littoralis_Contig86:163436..181601- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig86:163436..181601- >mRNA_P-littoralis_Contig86.61.74 ID=mRNA_P-littoralis_Contig86.61.74|Name=mRNA_P-littoralis_Contig86.61.74|organism=Pylaiella littoralis U1_48|type=CDS|length=6282bp|location=Sequence derived from alignment at P-littoralis_Contig86:163436..181601- (Pylaiella littoralis U1_48)back to top |