mRNA_P-littoralis_Contig86.36.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig86.36.1
Unique NamemRNA_P-littoralis_Contig86.36.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: D8LTE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE4_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 4.720e-172
Identity = 260/314 (82.80%), Postives = 274/314 (87.26%), Query Frame = 2
Query:  104 MSTPADPLEFPTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 1045
            MS P DPL FP SAGPTAQ DAPPLSVPTFDV  GK F+VTGGTQGMGLVISACIAKAGAS+VTISAR+QDTGEKA+A+L E+TPSC+                       F+FVPADVA EE CSRL SEADRLMG IDGLVNCAAWTARATLDTTTVD+WDRMMNTNVRGPFLLVQAVSKSMRS+GRPGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK +RI RVNAINVGWTLTDNEH LQR+EMGSENWIE+ADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG
Sbjct:    1 MSAPTDPLAFPASAGPTAQKDAPPLSVPTFDVT-GKMFVVTGGTQGMGLVISACIAKAGASAVTISARSQDTGEKAVAQLTEHTPSCR-----------------------FFFVPADVAKEEDCSRLVSEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKRSRI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 289          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6H5KWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ8_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 3.010e-111
Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = 2
Query:  509 MGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 1045
            MG IDGLVNCAAWTARATLDTTTV++WDRMMNTNVRGPFLLVQAVSKSMRS+G PGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK ARI RVNAINVGWTLTDNEH LQR+EMGSENWIE+ADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG
Sbjct:    1 MGCIDGLVNCAAWTARATLDTTTVEVWDRMMNTNVRGPFLLVQAVSKSMRSKGHPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKGARI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 178          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6V1MI94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MI94_HETAK)

HSP 1 Score: 230 bits (586), Expect = 1.780e-67
Identity = 130/293 (44.37%), Postives = 181/293 (61.77%), Query Frame = 2
Query:  161 DDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP--GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 1033
            D   PLS P+FDV  GK F+VTGG QG+G  I+ C+A  GA+ V I+ R+++ GEK  + +     +CQA                        ++ ADVA E  C+ L   A    G + GLVN A  T R TL++T    +D ++ TN++GPF L +  +++MR       GS+VNISS+A+H G P +S YSV+KAALNA TK+HA EL+  R+ RVNA+ +GWTLTDNEH +Q +E G + W+E+ D  H  GR+LRPVD+AA  G LLSDA+ M++G ++D HP+ VN
Sbjct:   54 DGKQPLSKPSFDVT-GKNFIVTGGGQGLGRNIAECLAAQGAAGVLITCRSEEQGEKVKSYINSTNTNCQAE-----------------------WMVADVAAEAQCAALVRRALGRFGALHGLVNAAGLTTRGTLESTDEATFDALLATNLKGPFFLTKHAARAMRDTAGASGGSVVNISSIASHAGAPFISCYSVTKAALNAMTKVHALELQRDRV-RVNALAIGWTLTDNEHKIQLVERGPD-WLEKGDAAHPFGRILRPVDVAAAAGFLLSDAALMISGAVLDQHPDFVN 320          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: R1CSP3_EMIHU (Short chain dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSP3_EMIHU)

HSP 1 Score: 214 bits (546), Expect = 3.800e-62
Identity = 135/284 (47.54%), Postives = 172/284 (60.56%), Query Frame = 2
Query:  173 PLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            PLS PT   A G+ +L+TGGTQG+G  I+  +   GA+ V + ARN + G KA+ RL       QA+  G  E    F            FV AD++   G  +  + A   MG IDG+VN AA TAR  L +TT + WD MM  N R PFL+ QA ++ M  +G  GSIVNISSVA  GG P +  YSVSKAA +A T+ +A EL    I RVN + +GW  TDNE ALQR   G ++W+++AD    +GR+LRP D+AATV  LLSDAS MMTG +VDLHPE
Sbjct:    7 PLSSPTLS-ARGRNYLITGGTQGLGFEIATQLKACGAAKVAVIARNAERGTKAVERL-------QAAA-GVQEPFEAF------------FVEADLSDATGPGKAVALALAAMGAIDGVVNAAATTARGNLASTTAEDWDAMMACNARAPFLITQAATRHMIEKGIRGSIVNISSVAGKGGAPFLMAYSVSKAAASALTRNNAAELAPHGI-RVNCVEMGWCATDNEDALQRSVKG-DDWLQQADASQPLGRILRPADVAATVCFLLSDASLMMTGNVVDLHPE 267          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S1APH9_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APH9_NOCSC)

HSP 1 Score: 207 bits (528), Expect = 1.650e-59
Identity = 131/288 (45.49%), Postives = 172/288 (59.72%), Query Frame = 2
Query:  167 APPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMG-HIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQG-RPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            APPLS PTFD++ G  ++VTGGTQG+GL I+  +   GA  + + AR +  GE A+A L+  T  C A                       +FV  D+A        A+ +  ++G  +DGLVN A  T R  L TTT + +D+  + N R PFLL QA++  ++ +  R  SIVNISS+AA GG P ++ YS SKAALN  T  +A EL    I RVNAIN+GWT+TDNEH L   + G+E W+ EAD  H M RLLRPVD+A TV  LLS AS MMTG ++DLHP+
Sbjct:   12 APPLSRPTFDLSGGH-YIVTGGTQGLGLEIARQLKATGAGKLVLMARTRSRGEAAVAELSNAT--CTA-----------------------HFVEVDIADAASLQAAAAASFEILGDRVDGLVNAAGTTERGNLMTTTAEGFDKQFDINARAPFLLTQALAVHLKERKLRGASIVNISSLAAKGGAPFITAYSASKAALNVLTMNNAVELAEHGI-RVNAINMGWTVTDNEHELMVKKAGAE-WLTEADAAHPMKRLLRPVDVACTVCFLLSPASTMMTGNVLDLHPD 271          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: K0TJ38_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ38_THAOC)

HSP 1 Score: 207 bits (527), Expect = 2.850e-59
Identity = 137/300 (45.67%), Postives = 175/300 (58.33%), Query Frame = 2
Query:  170 PPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPS--CQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEA-DRLMGH------IDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP---GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 1033
            PPLS P+ DV+ G+ F+VTGGTQG+GL I+  + + GAS V + +R+    E AI  + ++ PS  C A                        FV AD+A     S +   A + L  H      I G+VN AA TAR  L +TT D++D   + NVRGPFLL QA SK M   G P   GS+VNI SVAA GG P +  YS +K+AL   TK +A EL    I RVN IN+GWTLT+NEH LQ     +E W EEADK   +GR+LRP D+A++V  LLS AS MMTG I+DLHPE+ +
Sbjct:    3 PPLSHPSLDVS-GRFFVVTGGTQGLGLEIAKQLKQCGASGVVLVSRSPSKAEAAIREIGDHCPSSTCHA-----------------------VFVKADMAVSSEVSSIVPRAVEELAKHCGSPIVITGVVNAAALTARGNLASTTPDMFDSQFSVNVRGPFLLTQAASKHMIEAGVPRGLGSVVNICSVAADGGAPFIMGYSCAKSALVTLTKNNAAELAPKGI-RVNGINMGWTLTENEHKLQSEVHKNERWHEEADKSVPLGRILRPADVASSVLFLLSGASTMMTGAILDLHPEIAS 277          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S4R1D7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R1D7_9DINO)

HSP 1 Score: 204 bits (518), Expect = 1.200e-57
Identity = 136/316 (43.04%), Postives = 188/316 (59.49%), Query Frame = 2
Query:   89 QQETLMSTPADPLEF--PTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMG-HIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKS-MRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            Q+ +++++PA P       S  P A    PPLS P+FD++ GK ++VTGGTQG+GL I+  +   GA+ + + +R +  GE A+A L         SGDG                    FV A++A        A+EA + +G H+DGLVN A  T R  L  TTV+++++  + N R PFLL QAV+K  + ++ R GSIVN+SS+AA GG P +  YS SKAALNA T  +A EL    I RVNA+N+GWTLTDNE+ L  +  G  NW++ A+ G  M R++RPVD+A TV  LLS AS M TG + DLHP+
Sbjct:   12 QRASVLASPAAPATMCADRSRSP-APRGGPPLSRPSFDLS-GKHYIVTGGTQGLGLEIARQLKALGAAKLALMSRTKAKGEAAVAEL---------SGDGCTAC----------------FVEANMADPASVMPAAAEAIKALGGHVDGLVNAAGTTERGNLMDTTVEMFNKQFDINTRAPFLLTQAVAKHWIDAKVRGGSIVNVSSIAAKGGAPFIMAYSASKAALNALTTNNAGELAPHGI-RVNAVNMGWTLTDNENDLM-VAKGGPNWLDAAEPGLPMKRIMRPVDVACTVCFLLSPASQMTTGNLYDLHPD 298          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S2HYS1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.940e-57
Identity = 133/289 (46.02%), Postives = 172/289 (59.52%), Query Frame = 2
Query:  170 PPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRL---ASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSM-RSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            P LS    DV  G+ F+VTGGTQG+GL I+  +   GA+ + + +R+Q  GEK    L  +  SC  +                       FV AD++  E  S +   A+EA   +G I GLVN AA T R  L TTT + +D  M  NVR PFL+ Q V+K M  +  + GSIVNI SVAA GG P +  YS +KAAL++ TK +A EL    I RVN +N+GW LT+NE  LQR   G ++W E+AD G  +GR+LRP D+AATVG LLSDASAMMTG++V LHPE
Sbjct:    6 PTLSATNLDVT-GRVFVVTGGTQGLGLAIARFLKGNGAAGLVLVSRSQAKGEKVCKELQGDDGSCTVA-----------------------FVSADLSKAEDASAVVPKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDMQMALNVRAPFLVSQGVAKHMIENNVKGGSIVNICSVAALGGAPFIMAYSAAKAALSSMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRQNSG-DDWAEKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVVGLHPE 268          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6V2PCJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PCJ6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.180e-55
Identity = 127/277 (45.85%), Postives = 165/277 (59.57%), Query Frame = 2
Query:  206 GKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLM---GHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSM-RSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            G+ F++TGGTQG+GL I+  +   GA+ + + +R+++ GEK    L ENT                     C  +    FV AD+   E  S + ++A   M   G I GLVN AA T R  L TTT + +D  M  NVR PFL+ Q  +K M  ++ R GSIVNI SVAA GG P +  YS SKAAL A TK +A EL    I RVN +N+GW LT+NE  LQR   G ++W  +AD G  +GR+LRP D+AATVG LLSDASAMMTG+++ LHPE
Sbjct:   19 GRVFVITGGTQGLGLAIARYLKGNGAAGLVLVSRSKEKGEKVCKELEENT---------------------CVVK----FVAADLGNTEDASSVIAKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDIQMALNVRAPFLVSQGAAKHMIENKVRGGSIVNICSVAALGGAPFIMAYSASKAALAAMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRKNSG-DDWAVKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVLSLHPE 268          
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: B7G702_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G702_PHATC)

HSP 1 Score: 195 bits (496), Expect = 2.420e-54
Identity = 131/300 (43.67%), Postives = 173/300 (57.67%), Query Frame = 2
Query:  152 TAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHID---GLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP------GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
            T  D  PPL+  +     G+ F+VTGGTQG+GL I+  + KAGA+ + + AR+ D G+ A+  L +     Q   DG     +             +F+P D++  +    + S  + L+   D   GLVN AA T R  L TTT + +D     NVR PFLL QA++   R Q          SIVNISSVAA+GG P ++ YS SKAAL+  TK +A EL    I RVNAI +GWT TDNE ALQ  +    +WI+ AD+G  +GR+LRP D+A TV  LLS+ASAM TGT+VDLHPE
Sbjct:   27 TESDLEPPLASLSLSTK-GRYFVVTGGTQGLGLAIAIQLKKAGAAGLFLVARSPDKGQAAVEHLRQQH---QLGDDGKSTCQV-------------FFLPTDLSDTKQVQTVFSRIEDLLSTTDVVSGLVNAAAITTRGNLFTTTSNEFDTQFFVNVRAPFLLTQALAVHCRKQQTQRTSQVRASIVNISSVAAYGGAPFITAYSASKAALSTLTKTNAAELAPHGI-RVNAIQLGWTYTDNEDALQTAQ-SDRDWIQRADEGVPLGRILRPHDVAVTVVFLLSEASAMTTGTLVDLHPE 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE4_ECTSI4.720e-17282.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ8_9PHAE3.010e-11193.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1MI94_HETAK1.780e-6744.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1CSP3_EMIHU3.800e-6247.54Short chain dehydrogenase n=1 Tax=Emiliania huxley... [more]
A0A7S1APH9_NOCSC1.650e-5945.49Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
K0TJ38_THAOC2.850e-5945.67Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4R1D7_9DINO1.200e-5743.04Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S2HYS1_9STRA1.940e-5746.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6V2PCJ6_9STRA2.180e-5545.85Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7G702_PHATC2.420e-5443.67Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:71301..77060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTE4
Preferred nameTR-1
PFAMsPex14_N,adh_short,adh_short_C2
Model size1609
Max annot lvl2759|Eukaryota
KEGG rclassRC00144
KEGG koko:K08081
KEGG ReactionR02832
KEGG Pathwayko00960,ko01100,ko01110,map00960,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons11
Evalue2.83e-176
EggNOG OGsCOG1028@1|root,KOG0725@2759|Eukaryota
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-02_006020.1
EC1.1.1.206
Descriptionoxidation-reduction process
Cds size945
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.36.1prot_P-littoralis_Contig86.36.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig86 71733..76499 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791730.164454-UTR-P-littoralis_Contig86:71300..713901680791730.164454-UTR-P-littoralis_Contig86:71300..71390Pylaiella littoralis U1_48UTRP-littoralis_Contig86 71301..71390 +
1680791730.1806839-UTR-P-littoralis_Contig86:71719..717321680791730.1806839-UTR-P-littoralis_Contig86:71719..71732Pylaiella littoralis U1_48UTRP-littoralis_Contig86 71720..71732 +
1680791730.3203592-UTR-P-littoralis_Contig86:76499..770601680791730.3203592-UTR-P-littoralis_Contig86:76499..77060Pylaiella littoralis U1_48UTRP-littoralis_Contig86 76500..77060 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791730.1903934-CDS-P-littoralis_Contig86:71732..718321680791730.1903934-CDS-P-littoralis_Contig86:71732..71832Pylaiella littoralis U1_48CDSP-littoralis_Contig86 71733..71832 +
1680791730.2054067-CDS-P-littoralis_Contig86:72219..722801680791730.2054067-CDS-P-littoralis_Contig86:72219..72280Pylaiella littoralis U1_48CDSP-littoralis_Contig86 72220..72280 +
1680791730.2188466-CDS-P-littoralis_Contig86:72829..730011680791730.2188466-CDS-P-littoralis_Contig86:72829..73001Pylaiella littoralis U1_48CDSP-littoralis_Contig86 72830..73001 +
1680791730.2293618-CDS-P-littoralis_Contig86:73243..733361680791730.2293618-CDS-P-littoralis_Contig86:73243..73336Pylaiella littoralis U1_48CDSP-littoralis_Contig86 73244..73336 +
1680791730.2403526-CDS-P-littoralis_Contig86:73832..739401680791730.2403526-CDS-P-littoralis_Contig86:73832..73940Pylaiella littoralis U1_48CDSP-littoralis_Contig86 73833..73940 +
1680791730.2580252-CDS-P-littoralis_Contig86:74437..744981680791730.2580252-CDS-P-littoralis_Contig86:74437..74498Pylaiella littoralis U1_48CDSP-littoralis_Contig86 74438..74498 +
1680791730.2695615-CDS-P-littoralis_Contig86:74992..751011680791730.2695615-CDS-P-littoralis_Contig86:74992..75101Pylaiella littoralis U1_48CDSP-littoralis_Contig86 74993..75101 +
1680791730.2800422-CDS-P-littoralis_Contig86:75509..756121680791730.2800422-CDS-P-littoralis_Contig86:75509..75612Pylaiella littoralis U1_48CDSP-littoralis_Contig86 75510..75612 +
1680791730.2937722-CDS-P-littoralis_Contig86:76162..762791680791730.2937722-CDS-P-littoralis_Contig86:76162..76279Pylaiella littoralis U1_48CDSP-littoralis_Contig86 76163..76279 +
1680791730.3077688-CDS-P-littoralis_Contig86:76478..764991680791730.3077688-CDS-P-littoralis_Contig86:76478..76499Pylaiella littoralis U1_48CDSP-littoralis_Contig86 76479..76499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig86.36.1

>prot_P-littoralis_Contig86.36.1 ID=prot_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=315bp
MSTPADPLEFPTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLV
ISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIR
FRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTA
RATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVA
AHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNE
HALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGT
IVDLHPEMVNNCWG*
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mRNA from alignment at P-littoralis_Contig86:71301..77060+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig86.36.1 ID=mRNA_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5760bp|location=Sequence derived from alignment at P-littoralis_Contig86:71301..77060+ (Pylaiella littoralis U1_48)
CTAAGCCGAGCTCTTTCTGTGTGGGCCACGACAAACATTTCCAGGACCTC GTCCACTAACAACCTCCCTGACGCCGTCCTCATACTGTCAGTGAGTCGGA TGTTTCATTTGGGGTTGTGAGAGTGCGGACGAACGGGATATAACAACCTG GATTCGGACGGTAACAACGGTTATGATGACACATGTTCTATCACACCGTA GCTCGTGTGCAGTACATCAGCACAGCAGTAGTAGAAAATATCTGCGTCGC GTGCACATCATAACTTGGTGCCTGCAACACCCGCATGGAGTTACTCATCT GGTCAGTCAATATTCCGTAAATCTCAATCTCCACCAATATGTTCACCGAG GTTCCTGACTTCTAGGTGCCCTCTTTCTCTCGGCCAATAACCGTCCCTGC TCGTTCCCATGTGCGCAAGGCAGGAGACTTTGATGTCGACTCCAGCAGAC CCTCTAGAGTTTCCCACCTCCGCGGGACCAACTGCCCAAGACGATGCGCC CCCTTTGTCGGTCCCTACCTTTGACGTCGCAGGTAAGTACACCAGAAGAT TGGTTGACTTAAAGGAGTGTGCAACAACAGCATCTCTCTGCATCTCAGTA TCTCAAGTGAAGTTTTTGTCTTCTCATGTGTACACTTGGATGCAAAGTTG ATTTTCTTGGTTGGTCTGTCTCGCAGCAGCCGTCAGGGCGCGACGCTGCT GGTTAGAGGCTCCGCACCTCAAACAGCATTGGCTGTTCTGGCGGGTTTTG GAGAGGGTTGCTCAAAAACTGCCGCCAGACATGCATGCACCGACAAGGCT GGCCCACCCGTGCACAGCCCGTTCATCAAGCAGCAGACCGTTCCACCTGA TCGCGCCGCCTCCAATACGCTCGCTGATTCGTTGCACGGCCTCTGGCCCT TTGGCGGTGCCGGCTGGAGCAGGGAAGACCTTCCTGGTTACTGGAGGGAC GCAAGGAATGGGCCTCGTCATTTCAGCCTGGTAGGATGAGGTTTTCGTAG CGCATTCTTCGATTATTAGTGTGCGAGGATGTGAAAGCTACGCCAAGTAC GCCCCCGCCTGCGCGGGCTGGCCCGTGCGCCAATATATCTGTGTCTAAAG ATGTTTGAAGTCTGGTCCGCCGTAAGCTGTGTTAGTTGCTATTTTTTGCC GTGAATTCTTCGGGCTTCTTGTACTTCTGTTGAACGGCCAACTCCAGAGA GAGTCGAGATCACTGAGAGGCTGCGAATGGGGATGAACCCGGTGCGGACG ATTCCCAAGATCCCGGGACGCGAGGCAATCATGAAGTCACAGGTTTTCAA GGATCGCCCAAATGCTGGTTTGAAATCACGGACACTGAATTAAAACGAAA AACATGAGCTTGTTTGCAAATATTATGGTGTTCCACCGCCCCGGTAACCA CGCGCAAAGCTCACCCATCTAAAGCCAACATCATAATCGTTGGCATTGTT GGCAGCACCTCAGAGACGTGTAGACGCGCCTTCTCGCCCTTCTTTGCCGG CGGTTGTTTGTGTGTGCCGCAATGAAAAGTATCGCCAAGGCTGGCGCAAG CTCAGTGACGATCAGTGCACGAAACCAGGACACCGGCGAGAAAGCCATCG CTCGACTAGCGGAGAATACGCCATCTTGCCAGGCAAGCGGAGATGGGGCA TTGGAGACAAATATACGTTTCCGGCGCTTGAATTGCTTCTGTCGCAAGCT CGTTGAAACTCTCGACGTCTGCATGTTATGTCATTTGATGTGTTGACACG GAAGGAACGGAGCTGAGTTCCTTGTGTTTGTCTGTGGTGCTCGGCCGCAT AAACAATCTGACCAGAGGTTGGATCAACAATTGCAGTAGTCTTCGTACGT GCAGCTTTCGAACAACTTGACCGTATACTTCGGCCTCTGACAAGCTTCGT TTTTGTCTGCCTGATTGCTGTGCTTCACGGACGCACACCGCAGTTCTACT TCGTGCCGGCTGACGTCGCCACCGAGGAAGGCTGCTCCAGGCTAGCGTCG GAGGCAGATCGGCTTATGGGTCACATCGATGGTCTGGTGAGCTTAACACC CGTCATTTGTCTTGCCTGCAGAGTCAATGTATGCACGCCTCTGTCGGGTA GGCACCCTCTGCTTCAAAGAGCCCGCCCGCGTTGGCATCCGGCTTGCGGG GTGTATCAAGTGGTCTGTTGACCTCATTGGCCAGTTCACTCTGGCAGCCT GCCTGCCACATAGTACATGTGCGCCTGGAGTCGCGTGCTAAAGTATAGCG GGCTTAGTGTATGGTTTACGGTAGATCGCTTACCTAACCGCTCGGCTGCA GCGAGAGGTATCATAGCGCGGAGGGACATATTTTCGTCTTCGGGGTCTCG CTGGACAGGTAGGTTTATTTCTTCTGTAGGCGTGTCGCATGCCGTAACTG GTTTGTTTAAGGATGCTAGTGTTCCGTTCCACCAACACTCTCAGCGTATT TTTTCGCGGCAGCCAGTCGAGCACCTCAACCGCGGTGCGACATGACCTGA TGCGGCGTACACGGGGCGTCTGTGTTTGCCAGGTGAACTGCGCCGCTTGG ACAGCGAGAGCAACACTTGACACCACGACGGTGGACATCTGGGACCGCAT GATGAACACCAATGTGCGCGGCCCCTTTCTTCTAGTGCAGGTGAGCGGGA TGCCTTACCGATGGCCCGAATGGCAAATCAGACCAGGAATAGTACGTGGT CGGCAGGCTGGAGATGCACTACGGAAGTACAGCACGTGCCATTGGCGACA CGACGTTGGTCGTTTTGGTTATTATTTTGTACGTAGGTGAAGCGTTTTCC GATGCGTTAATATTTTGTCTCAAGATGCAGGTGTCCTTTTCTACTGAGCC GCGAAAAGGCCTGGTAATCTTATATCAACCGGGTACACCTATTCCATGCT GGCTCATACAAGGGAGTTAGCACACGAGCATATCGGAAGGCCCCGCAGTA TTGCAAGTTTTCAAATGTGCGTTAGGTAGGTCTGTCCGTCGCTCCGTCCC CGTTTGCTGGACGATATTTGCTGCGTGCGTGGATTCTTCTTGACGAAAAG TAAATACTCCGTTTCAGTGTGCAATTTTTTCGCGCGAATTTTCGGTAACA ATTTTTCTGAAAACTCTTTACCCCTATGTGAATACAGGCGGTGTCCAAGT CTATGAGAAGCCAAGGCCGGCCAGGATCGATCGTAAATATTTCCAGCGGT TAGTACTAGGCTGTAAGGACGTGAATATAAGTATGGTATGACAGCAGTGT CGAACCAAAAATGATGCCTTCTTGTAGAGGAGGGATTGTTTATTGTTTGT CGTGAAATGCTGTCTTTGTCATTTGTATGTCGATAACCAATCAAAAGGCG ACCAATTTCGGTTCTTTCGCACAAATACGTACCTTTGTTTTTCGGGTAGG ATTGCGAAATTGGACACACCTTCTTATTGCGCTGGAGTTGCTCATGTTCA CCTGTCGTGTATGGGGGCACCATGTTTTGTGGCTGGGGCTTTCGCCCGAA CATTTTGAAGCCATCAAGGAATGCTTTCAGAATGACCAGGCCCGTCGCCA GGAATTTGTTAGCTCCTGCGCTCCTGCCCTCCTCGCTCTCGTTTTACCTG CCGATAGTGTCTTGATTCGACGAGCAATATGGCTGTGATACGGCGCTTGA TCGTGTTCTTTGTGTATGTTGTGTTGTGTTTCTGTTGTGCAGTCGCTGCC CATGGCGGCATCCCGAAAGTCAGCACCTACTCCGTCTCCAAGGCAGCGCT CAACGCGTGTACCAAGATGCACGCCTATGAGCTCAAAGCTGCTCGCATCA GGTACGCGGGACGTTAATATGTTGAAGAACGAGATGGATTAAGTACAGCA GGTTTGCTGTGGGTTCCCGCATACATGTGCGTTAGCCTTTTCAAAAATGG GGGTGCAGACAGGTTATGGTGAAGTCCATCACGTGTAACACGGGACCCTA GGGTGCGCTTCAATGGTACAGCCATCTGAGAGTGATTCACCTAACGCAAT TTTTACTAGCCAGGTATAGGGTTCCCACTGACACGTACGAACACCATGAG TCATGTTTGCTGTGTGGTGTCCAGGCTTTGCTCGAGCTTGTTGTCACACA ACGGAGGCGATGCTTCGACGAATATTTATTTGTTTCTGCTTTATTCCGAA GAGGGGGTGGGGGGAATTTCAATGTATGTGTGCATCCTCATAACTTTCGT TTGAGCGAGCAGGGTCAACGCCATAAACGTCGGCTGGACGTTGACAGACA ACGAGCACGCTCTTCAGCGGATTGAGATGGGAAGCGAAAACTGGATCGAG GAGGCTGACAAGGTGTAAAAACGTGTTCTGGGAATCGGTTGTAGAATGGT GATTACATTTTCATGGTGTCGGGGCTCTCAGCGATGAAAACATATTACGA AGTACTTCCTACCTGGTATTGTATTACGTAAAGTTCAGCAGACAACGACG GACTTTGATTTTGAGCACCACGTACTTGTGAAGTGTTGCTTGTGGAGTCG TATCCGACTCCCTCTGTTGATATCGCCGTGTACGCCCCAAAAGTTGGACT TGTGTGGACGCAAACGTAACCCGTTCCTCCGTCAACGTACATCCATGCGT GATGTGTTCGTTGCTGATGCGATGTCAATCTCACATTGTTGCAGCCAGTC ACTACTCTCGTGTGTTGATTATTGATTTGGTCGGTTAAGTTTCGTTGAGC TGGTTGATTTGATACGTGTTGGCCGTTGAAGTACCGTCGAGTGCCTGGTT AATTTGACATAATATGTTTTGCTCATAGGTCGTTTCCCTTCTTTTTTTTG CCCTTGCTGGGCGTCGACGACTCTGGTATACTCCACCACCACCGACGACT TCTGAACAAAAGGGGCATGCTATGGGTCGGTTACTGCGTCCTGTGGACAT CGCCGCTACCGTTGGACATCTCCTCTCTGACGCGAGCGCAATGATGACGG GAACAATTGTCGATCTGCACCCTGAGATGGCGAGTGTAAAAATATACACG CACAAAAGTCTGTTTACATAGGTTTCACCCAACTTGAGGCTGAACCAAAA CGTGGATGCACAGCAGCAGAAGCAGCCTATCAGCGTGTACTACATTAATT CCTCGACACTCCGCGTCCTAATACATGGCCGTCGTTTGCGCCACGTTTTC GTTGCTATGTAATTTCGGTCGTGAGCAGGTGAACAACTGCTGGGGTTGAG CCGAGGGGACCCTAGGGCGAGCTTTTTGGGGATGTTACAGCCAACATGCG TCTTGCAGCCGAGCAAACTAGAAAGCTTAAACATACGTCTGCCGAGCTGA TGAAGCGCTAGACGTCTGTTCTTTGGGGTGTGACGTTGTTGGTACTCGAC ATGAACGATATTGTTACCACAGCTGCTGTTTGTGTGGTTGGTCGTGAGGT ACACGGGGCTGGTCGATGAAGCCTGCGGCTTTCAAGGACACGGCCGCACA TGAATGTCAGCGATCTCCGCACGACGACACCTACGTTAATGCTCGTTTTT CATACTTGCACTTGGAAGTAGGACGACGGGAAATGAAGAGCGCAGAGTGC GGGTTGTGTCGGTGGAGCCTGTGCTTACGTGGTACTGTCAAACTCTCGTA ACACGACACTGCTGTAGCAGGTGAACGTGGCCATGGCGTGCTATTTCCTT GACCTGAAACGGAGCGATCCAAGATAAAGCGCTTTTACCCGCCGTAGTCC GTTTCAAGCAGAGACTTTTTTCGTAGGTGTGTTCAGAAAGAGCACGCGCT TCCAAAAACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig86:71301..77060+

>mRNA_P-littoralis_Contig86.36.1 ID=mRNA_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=945bp|location=Sequence derived from alignment at P-littoralis_Contig86:71301..77060+ (Pylaiella littoralis U1_48)
ATGTCGACTCCAGCAGACCCTCTAGAGTTTCCCACCTCCGCGGGACCAAC
TGCCCAAGACGATGCGCCCCCTTTGTCGGTCCCTACCTTTGACGTCGCAG
CAGGGAAGACCTTCCTGGTTACTGGAGGGACGCAAGGAATGGGCCTCGTC
ATTTCAGCCTGTATCGCCAAGGCTGGCGCAAGCTCAGTGACGATCAGTGC
ACGAAACCAGGACACCGGCGAGAAAGCCATCGCTCGACTAGCGGAGAATA
CGCCATCTTGCCAGGCAAGCGGAGATGGGGCATTGGAGACAAATATACGT
TTCCGGCGCTTGAATTGCTTCTGTCGCAAGCTCTTCTACTTCGTGCCGGC
TGACGTCGCCACCGAGGAAGGCTGCTCCAGGCTAGCGTCGGAGGCAGATC
GGCTTATGGGTCACATCGATGGTCTGGTGAACTGCGCCGCTTGGACAGCG
AGAGCAACACTTGACACCACGACGGTGGACATCTGGGACCGCATGATGAA
CACCAATGTGCGCGGCCCCTTTCTTCTAGTGCAGGCGGTGTCCAAGTCTA
TGAGAAGCCAAGGCCGGCCAGGATCGATCGTAAATATTTCCAGCGTCGCT
GCCCATGGCGGCATCCCGAAAGTCAGCACCTACTCCGTCTCCAAGGCAGC
GCTCAACGCGTGTACCAAGATGCACGCCTATGAGCTCAAAGCTGCTCGCA
TCAGCAGGGTCAACGCCATAAACGTCGGCTGGACGTTGACAGACAACGAG
CACGCTCTTCAGCGGATTGAGATGGGAAGCGAAAACTGGATCGAGGAGGC
TGACAAGGGGCATGCTATGGGTCGGTTACTGCGTCCTGTGGACATCGCCG
CTACCGTTGGACATCTCCTCTCTGACGCGAGCGCAATGATGACGGGAACA
ATTGTCGATCTGCACCCTGAGATGGTGAACAACTGCTGGGGTTGA
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