mRNA_P-littoralis_Contig86.36.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: D8LTE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE4_ECTSI) HSP 1 Score: 496 bits (1277), Expect = 4.720e-172 Identity = 260/314 (82.80%), Postives = 274/314 (87.26%), Query Frame = 2
Query: 104 MSTPADPLEFPTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 1045
MS P DPL FP SAGPTAQ DAPPLSVPTFDV GK F+VTGGTQGMGLVISACIAKAGAS+VTISAR+QDTGEKA+A+L E+TPSC+ F+FVPADVA EE CSRL SEADRLMG IDGLVNCAAWTARATLDTTTVD+WDRMMNTNVRGPFLLVQAVSKSMRS+GRPGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK +RI RVNAINVGWTLTDNEH LQR+EMGSENWIE+ADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG
Sbjct: 1 MSAPTDPLAFPASAGPTAQKDAPPLSVPTFDVT-GKMFVVTGGTQGMGLVISACIAKAGASAVTISARSQDTGEKAVAQLTEHTPSCR-----------------------FFFVPADVAKEEDCSRLVSEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKRSRI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 289
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6H5KWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ8_9PHAE) HSP 1 Score: 337 bits (864), Expect = 3.010e-111 Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = 2
Query: 509 MGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVNNCWG 1045
MG IDGLVNCAAWTARATLDTTTV++WDRMMNTNVRGPFLLVQAVSKSMRS+G PGSIVNISSV AHGGIPKVSTYSVSKAALNACTKMHAYELK ARI RVNAINVGWTLTDNEH LQR+EMGSENWIE+ADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMV+NCWG
Sbjct: 1 MGCIDGLVNCAAWTARATLDTTTVEVWDRMMNTNVRGPFLLVQAVSKSMRSKGHPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKGARI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 178
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6V1MI94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MI94_HETAK) HSP 1 Score: 230 bits (586), Expect = 1.780e-67 Identity = 130/293 (44.37%), Postives = 181/293 (61.77%), Query Frame = 2
Query: 161 DDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP--GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 1033
D PLS P+FDV GK F+VTGG QG+G I+ C+A GA+ V I+ R+++ GEK + + +CQA ++ ADVA E C+ L A G + GLVN A T R TL++T +D ++ TN++GPF L + +++MR GS+VNISS+A+H G P +S YSV+KAALNA TK+HA EL+ R+ RVNA+ +GWTLTDNEH +Q +E G + W+E+ D H GR+LRPVD+AA G LLSDA+ M++G ++D HP+ VN
Sbjct: 54 DGKQPLSKPSFDVT-GKNFIVTGGGQGLGRNIAECLAAQGAAGVLITCRSEEQGEKVKSYINSTNTNCQAE-----------------------WMVADVAAEAQCAALVRRALGRFGALHGLVNAAGLTTRGTLESTDEATFDALLATNLKGPFFLTKHAARAMRDTAGASGGSVVNISSIASHAGAPFISCYSVTKAALNAMTKVHALELQRDRV-RVNALAIGWTLTDNEHKIQLVERGPD-WLEKGDAAHPFGRILRPVDVAAAAGFLLSDAALMISGAVLDQHPDFVN 320
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: R1CSP3_EMIHU (Short chain dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSP3_EMIHU) HSP 1 Score: 214 bits (546), Expect = 3.800e-62 Identity = 135/284 (47.54%), Postives = 172/284 (60.56%), Query Frame = 2
Query: 173 PLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
PLS PT A G+ +L+TGGTQG+G I+ + GA+ V + ARN + G KA+ RL QA+ G E F FV AD++ G + + A MG IDG+VN AA TAR L +TT + WD MM N R PFL+ QA ++ M +G GSIVNISSVA GG P + YSVSKAA +A T+ +A EL I RVN + +GW TDNE ALQR G ++W+++AD +GR+LRP D+AATV LLSDAS MMTG +VDLHPE
Sbjct: 7 PLSSPTLS-ARGRNYLITGGTQGLGFEIATQLKACGAAKVAVIARNAERGTKAVERL-------QAAA-GVQEPFEAF------------FVEADLSDATGPGKAVALALAAMGAIDGVVNAAATTARGNLASTTAEDWDAMMACNARAPFLITQAATRHMIEKGIRGSIVNISSVAGKGGAPFLMAYSVSKAAASALTRNNAAELAPHGI-RVNCVEMGWCATDNEDALQRSVKG-DDWLQQADASQPLGRILRPADVAATVCFLLSDASLMMTGNVVDLHPE 267
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S1APH9_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APH9_NOCSC) HSP 1 Score: 207 bits (528), Expect = 1.650e-59 Identity = 131/288 (45.49%), Postives = 172/288 (59.72%), Query Frame = 2
Query: 167 APPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMG-HIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQG-RPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
APPLS PTFD++ G ++VTGGTQG+GL I+ + GA + + AR + GE A+A L+ T C A +FV D+A A+ + ++G +DGLVN A T R L TTT + +D+ + N R PFLL QA++ ++ + R SIVNISS+AA GG P ++ YS SKAALN T +A EL I RVNAIN+GWT+TDNEH L + G+E W+ EAD H M RLLRPVD+A TV LLS AS MMTG ++DLHP+
Sbjct: 12 APPLSRPTFDLSGGH-YIVTGGTQGLGLEIARQLKATGAGKLVLMARTRSRGEAAVAELSNAT--CTA-----------------------HFVEVDIADAASLQAAAAASFEILGDRVDGLVNAAGTTERGNLMTTTAEGFDKQFDINARAPFLLTQALAVHLKERKLRGASIVNISSLAAKGGAPFITAYSASKAALNVLTMNNAVELAEHGI-RVNAINMGWTVTDNEHELMVKKAGAE-WLTEADAAHPMKRLLRPVDVACTVCFLLSPASTMMTGNVLDLHPD 271
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: K0TJ38_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ38_THAOC) HSP 1 Score: 207 bits (527), Expect = 2.850e-59 Identity = 137/300 (45.67%), Postives = 175/300 (58.33%), Query Frame = 2
Query: 170 PPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPS--CQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEA-DRLMGH------IDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP---GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVN 1033
PPLS P+ DV+ G+ F+VTGGTQG+GL I+ + + GAS V + +R+ E AI + ++ PS C A FV AD+A S + A + L H I G+VN AA TAR L +TT D++D + NVRGPFLL QA SK M G P GS+VNI SVAA GG P + YS +K+AL TK +A EL I RVN IN+GWTLT+NEH LQ +E W EEADK +GR+LRP D+A++V LLS AS MMTG I+DLHPE+ +
Sbjct: 3 PPLSHPSLDVS-GRFFVVTGGTQGLGLEIAKQLKQCGASGVVLVSRSPSKAEAAIREIGDHCPSSTCHA-----------------------VFVKADMAVSSEVSSIVPRAVEELAKHCGSPIVITGVVNAAALTARGNLASTTPDMFDSQFSVNVRGPFLLTQAASKHMIEAGVPRGLGSVVNICSVAADGGAPFIMGYSCAKSALVTLTKNNAAELAPKGI-RVNGINMGWTLTENEHKLQSEVHKNERWHEEADKSVPLGRILRPADVASSVLFLLSGASTMMTGAILDLHPEIAS 277
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S4R1D7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R1D7_9DINO) HSP 1 Score: 204 bits (518), Expect = 1.200e-57 Identity = 136/316 (43.04%), Postives = 188/316 (59.49%), Query Frame = 2
Query: 89 QQETLMSTPADPLEF--PTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMG-HIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKS-MRSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
Q+ +++++PA P S P A PPLS P+FD++ GK ++VTGGTQG+GL I+ + GA+ + + +R + GE A+A L SGDG FV A++A A+EA + +G H+DGLVN A T R L TTV+++++ + N R PFLL QAV+K + ++ R GSIVN+SS+AA GG P + YS SKAALNA T +A EL I RVNA+N+GWTLTDNE+ L + G NW++ A+ G M R++RPVD+A TV LLS AS M TG + DLHP+
Sbjct: 12 QRASVLASPAAPATMCADRSRSP-APRGGPPLSRPSFDLS-GKHYIVTGGTQGLGLEIARQLKALGAAKLALMSRTKAKGEAAVAEL---------SGDGCTAC----------------FVEANMADPASVMPAAAEAIKALGGHVDGLVNAAGTTERGNLMDTTVEMFNKQFDINTRAPFLLTQAVAKHWIDAKVRGGSIVNVSSIAAKGGAPFIMAYSASKAALNALTTNNAGELAPHGI-RVNAVNMGWTLTDNENDLM-VAKGGPNWLDAAEPGLPMKRIMRPVDVACTVCFLLSPASQMTTGNLYDLHPD 298
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A7S2HYS1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS1_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.940e-57 Identity = 133/289 (46.02%), Postives = 172/289 (59.52%), Query Frame = 2
Query: 170 PPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRL---ASEADRLMGHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSM-RSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
P LS DV G+ F+VTGGTQG+GL I+ + GA+ + + +R+Q GEK L + SC + FV AD++ E S + A+EA +G I GLVN AA T R L TTT + +D M NVR PFL+ Q V+K M + + GSIVNI SVAA GG P + YS +KAAL++ TK +A EL I RVN +N+GW LT+NE LQR G ++W E+AD G +GR+LRP D+AATVG LLSDASAMMTG++V LHPE
Sbjct: 6 PTLSATNLDVT-GRVFVVTGGTQGLGLAIARFLKGNGAAGLVLVSRSQAKGEKVCKELQGDDGSCTVA-----------------------FVSADLSKAEDASAVVPKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDMQMALNVRAPFLVSQGVAKHMIENNVKGGSIVNICSVAALGGAPFIMAYSAAKAALSSMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRQNSG-DDWAEKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVVGLHPE 268
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: A0A6V2PCJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PCJ6_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.180e-55 Identity = 127/277 (45.85%), Postives = 165/277 (59.57%), Query Frame = 2
Query: 206 GKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLM---GHIDGLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSM-RSQGRPGSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
G+ F++TGGTQG+GL I+ + GA+ + + +R+++ GEK L ENT C + FV AD+ E S + ++A M G I GLVN AA T R L TTT + +D M NVR PFL+ Q +K M ++ R GSIVNI SVAA GG P + YS SKAAL A TK +A EL I RVN +N+GW LT+NE LQR G ++W +AD G +GR+LRP D+AATVG LLSDASAMMTG+++ LHPE
Sbjct: 19 GRVFVITGGTQGLGLAIARYLKGNGAAGLVLVSRSKEKGEKVCKELEENT---------------------CVVK----FVAADLGNTEDASSVIAKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDIQMALNVRAPFLVSQGAAKHMIENKVRGGSIVNICSVAALGGAPFIMAYSASKAALAAMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRKNSG-DDWAVKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVLSLHPE 268
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Match: B7G702_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G702_PHATC) HSP 1 Score: 195 bits (496), Expect = 2.420e-54 Identity = 131/300 (43.67%), Postives = 173/300 (57.67%), Query Frame = 2
Query: 152 TAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVISACIAKAGASSVTISARNQDTGEKAIARLAENTPSCQASGDGALETNIRFRRLNCFCRKLFYFVPADVATEEGCSRLASEADRLMGHID---GLVNCAAWTARATLDTTTVDIWDRMMNTNVRGPFLLVQAVSKSMRSQGRP------GSIVNISSVAAHGGIPKVSTYSVSKAALNACTKMHAYELKAARISRVNAINVGWTLTDNEHALQRIEMGSENWIEEADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPE 1024
T D PPL+ + G+ F+VTGGTQG+GL I+ + KAGA+ + + AR+ D G+ A+ L + Q DG + +F+P D++ + + S + L+ D GLVN AA T R L TTT + +D NVR PFLL QA++ R Q SIVNISSVAA+GG P ++ YS SKAAL+ TK +A EL I RVNAI +GWT TDNE ALQ + +WI+ AD+G +GR+LRP D+A TV LLS+ASAM TGT+VDLHPE
Sbjct: 27 TESDLEPPLASLSLSTK-GRYFVVTGGTQGLGLAIAIQLKKAGAAGLFLVARSPDKGQAAVEHLRQQH---QLGDDGKSTCQV-------------FFLPTDLSDTKQVQTVFSRIEDLLSTTDVVSGLVNAAAITTRGNLFTTTSNEFDTQFFVNVRAPFLLTQALAVHCRKQQTQRTSQVRASIVNISSVAAYGGAPFITAYSASKAALSTLTKTNAAELAPHGI-RVNAIQLGWTYTDNEDALQTAQ-SDRDWIQRADEGVPLGRILRPHDVAVTVVFLLSEASAMTTGTLVDLHPE 307 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.36.1 >prot_P-littoralis_Contig86.36.1 ID=prot_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=315bp MSTPADPLEFPTSAGPTAQDDAPPLSVPTFDVAAGKTFLVTGGTQGMGLVback to top mRNA from alignment at P-littoralis_Contig86:71301..77060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig86.36.1 ID=mRNA_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5760bp|location=Sequence derived from alignment at P-littoralis_Contig86:71301..77060+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig86:71301..77060+ >mRNA_P-littoralis_Contig86.36.1 ID=mRNA_P-littoralis_Contig86.36.1|Name=mRNA_P-littoralis_Contig86.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=945bp|location=Sequence derived from alignment at P-littoralis_Contig86:71301..77060+ (Pylaiella littoralis U1_48)back to top |