mRNA_P-littoralis_Contig86.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig86.2.1
Unique NamemRNA_P-littoralis_Contig86.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 6.730e-138
Identity = 212/354 (59.89%), Postives = 255/354 (72.03%), Query Frame = 1
Query:  133 RQRKDGSTCAWAQLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRISHRQAVHGKDI*RLQQGWHHANPEG--LLLDRQQRLPQVADADRALQVPAERRRLALLEEAGERKEGCGVLLRHSEGSLQNPQARDDLPGAGAH*LRVLHVLHPAQHAAYLRRHGRPGGERQLGQQCRAPEHVGAQRG 1188
            RQRK    CAWA++L +++L ++  +  +K+FR  FR+P  FFLRLV +VKSK+WFATA  DA+GRQ HPVEHKV+A LTIL RGNC  SIY +SWMS+A VQ  FH FCKHFA EMYDEHI+LP+++NGELD VM  Y++LGF GA+GS DVTHI W +CPY   RSYTGKEG PTI YQVTVNHAGR   VTEGFTGSTNDKTI+CWDAAV++I   +    K      +       +G  LL+D      Q+     A QVPAER R  L EEAGER EG G+LLRH E  LQ+P+AR  +P AGAH  RVLHVLH AQHAA+LRR+GR GG+  +GQQCR  +HVG + G
Sbjct:   53 RQRKYVERCAWARMLEDKDL-EESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMG--AHQVPAERERSPLFEEAGERAEGRGMLLRHPERPLQDPEARHGVPRAGAHRQRVLHVLHLAQHAAHLRRNGRAGGKHAMGQQCRGGDHVGDRAG 403          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 4.680e-116
Identity = 168/212 (79.25%), Postives = 183/212 (86.32%), Query Frame = 1
Query:  145 DGSTCAWAQLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRI 780
            D STCAWAQ+L +E+L KD T+I AKKFRE FR+PY FFLRLVE+VK KDWFAT Q DA GR+ HPVEHKV+ACLTIL RGN  GSIY LSWMS+  VQ  FH+FC+HFATEMYDEHIFLP++ENGELDRVMG YEKLGFPGA+GSTDVTHI W RCPY Q RSYTGKEGKPT+ YQVTVNHAGRVL VTEGFTGSTNDKTIIC D AVDRI
Sbjct:   59 DTSTCAWAQVLEDEDL-KDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRI 269          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 7.720e-101
Identity = 144/218 (66.06%), Postives = 175/218 (80.28%), Query Frame = 1
Query:  127 DDRQRKDGSTCAWAQLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRI 780
            D+R+RK+   CAWAQ+L +++L +D  +I +K+FR  FR+P  FFLRLV +VKSKDWF T+  DA+ RQ HPVEHKV+A LTIL RGNC  SIY +SWMS+  VQT FHKFCKHFA EMYDEHI+LP+++NGELD VM  Y++LGF GA+GS DVTHI W +CPY  ARSYTGKEG PT+ YQVTVNHAGR + VTEGFT STNDKT +CWDA V++I
Sbjct:   24 DERKRKEVEKCAWAQMLEDKDL-EDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKI 240          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.540e-97
Identity = 174/353 (49.29%), Postives = 214/353 (60.62%), Query Frame = 1
Query:  133 RQRKDGSTCAWAQLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRISHRQAVHGKDI*RLQQGWHHANPEG--LLLDR---------QQRLPQVADA-------------DRALQVPAERRRLALLEEAGERKEGCGVLLRHSEGSLQNPQARDDLPGAGAH*LRVLHVLHPAQHAAYLRRHG 1119
            R+RKD   CAWAQ+L +++L  D  +I +K+FR  FR+PY FFLRL  +VKSKDWF T+  DA+GRQ HPVEHKV+A LTIL RGNC  SIY +SWMS+                             N ELD VM  Y++LGF G++GS DVTHI W +CPY  ARSYTGKEG P I YQV V+HAGR + VTEGFT STNDKTI+CWDAAV++I   +    K      +       +G  LL+D          + + P +  +             D   QVPAER R +L E AGER +G GVLLRH EGSLQ+P+AR  +P  GAH  RV   LH AQHAA+LRR+G
Sbjct:   89 RKRKDVEKCAWAQMLEDKDL-DDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKT---------------------------NDELDHVMEQYDRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVPAIGYQVMVSHAGRAIAVTEGFTCSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKLVNSVESKRPSLGPSPFPLSFFFPVEYPDGTHQVPAERERHSLFEGAGERAQGRGVLLRHPEGSLQDPEARHGVPRVGAHRQRVFRELHLAQHAAHLRRNG 413          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 6.880e-94
Identity = 140/204 (68.63%), Postives = 164/204 (80.39%), Query Frame = 1
Query:  169 QLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRI 780
            +LL E++ L+D T+I AK+ R  FR+PY  FLRLV +VKSK+WF+TA  DA G   HPVEHKV+A LTIL RGNC  SIY +SWMS+  VQ  FHKFC+HFA EMYDE I LPT+E+G+LD VM  Y++LGF GAVGS DVTHIAW RCPY QARSYTGKEG PTI YQVTV+HAGR + VTEGFTGSTNDKTI+CWD AV++I
Sbjct:   24 ELLLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKI 227          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 4.070e-90
Identity = 139/184 (75.54%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  779 FRTDKQYTEKTFDVYNKDGTTPTLKGCYLIVNNGYHKWRTLIEPSKYPLSVGDLLFSKRLESARKDVECFFGILKVRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSCLYRKQIKRDIVWLSR 1324
             RTDKQYTEKTFD+YN+DGTT TLKGCY + +NGYHKW+ LIEPSKYPLS  DLLFSKRLES RKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILHNMLHTFDGMD L EN NWVSSA + +T   E   D  S GTKDVN++PQ+E GH + KRQLTTS  YRK+ K+DIVWLSR
Sbjct:  145 IRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.960e-89
Identity = 143/201 (71.14%), Postives = 160/201 (79.60%), Query Frame = 2
Query:  719 GSQGPPTTRRSSAGMQRWTGFRTDKQYTEKTFDVYNKDGTTPTLKGCYLIVNNGYHKWRTLIEPSKYPLSVGDLLFSKRLESARKDVECFFGILKVRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQST--WEHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSCLYRKQIKRDIVW 1315
            GS    TT    A +++    RTDKQYTEKTFDVYN+DGTT TLKGCY++V+NGYHKW+ LIEPSKYPLS  DLLFSKRLES RKDVECFFGILK R RIL LAM +Q QERID VFFTCCILHNMLHTFDGMD L EN NWVSSA + +T   E   DS SVGTKDVN +PQ+EAGHA+ KRQLTTS  YRK+ K+DIV+
Sbjct:   83 GSTNDKTTVCWDAAVEK---IRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 6.980e-88
Identity = 127/189 (67.20%), Postives = 151/189 (79.89%), Query Frame = 1
Query:  133 RQRKDGSTCAWAQLLREEELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGR 699
            RQRKD  TCAWAQ+L +++L +D  +  +K+FR  FR+PY FFLRLV +VKSK+WF TA  D +GR  HPVEHKV+A LTIL RGNC  SIY +SWMS+A VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM  Y++LGF GA+GS DVTHI W +CPY  ARSYTGKEG PT+ YQVTVNHAGR
Sbjct:   53 RQRKDVKTCAWAQMLEDKDL-EDSNSRTSKQFRLDFRVPYSFFLRLVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 3.530e-80
Identity = 128/216 (59.26%), Postives = 161/216 (74.54%), Query Frame = 1
Query:  139 RKDGSTCAWAQLLRE--EELLKDRTNIEAKKFREGFRIPYRFFLRLVEVVKSKDWFATAQHDASGRQGHPVEHKVMACLTILARGNCLGSIYMLSWMSSAVVQTTFHKFCKHFATEMYDEHIFLPTDENGELDRVMG*YEKLGFPGAVGSTDVTHIAWGRCPYKQARSYTGKEGKPTIEYQVTVNHAGRVLTVTEGFTGSTNDKTIICWDAAVDRI 780
            RKD +   W Q L E  E    D T  EA++FR  FR+PY FF+ LVE+V+ +DWF T + D +GRQ  PVE KV+ACL IL+RGN    IY +S++S   V +TFH+FCK+FA E+YDE+++LPT E  +L +VM  Y+++GFPGAVGSTDVTHI WG CPY QAR YTGKEGKPT+ +QVTV+H+GRVL VT GFTG+TNDKTII +D AV RI
Sbjct:  101 RKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRI 314          
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 6.590e-77
Identity = 134/208 (64.42%), Postives = 152/208 (73.08%), Query Frame = 2
Query:  719 GSQGPPTTRRSSAGMQRWTG----FRTDKQYTEKTFDVYNKDGTTPTLKGCYLIVNNGYHKWRTLIEPSKYPLSVGDLLFSKRLESARKDVECFFGILKVRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSCLYRKQIKRDIVWLSR 1324
            G +G PT       +  W       RTDKQYTEKTFDVYN+DGTT TLKG YL+V+NGYHKW+ LIEPSKYPLS  DLLFSKRL+S R+D     GILK RFRILKLAM YQ QERID VFFTCCI+HNMLHTFDGMD L EN   VSSA + +T   E   D  SVG +DVN++PQ+E G  + KRQLTTS  YRK+ K+DIVWLSR
Sbjct:  252 GKEGFPTIAYQVVTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPI7_ECTSI6.730e-13859.89Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5JBE2_9PHAE4.680e-11679.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE7.720e-10166.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFR8_9PHAE1.540e-9749.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE6.880e-9468.63DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE4.070e-9075.54DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI1.960e-8971.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L642_9PHAE6.980e-8867.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JPH7_9PHAE3.530e-8059.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE6.590e-7764.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:741..4243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1327
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.82e-94
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size567
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791729.3807998-CDS-P-littoralis_Contig86:740..11781680791729.3807998-CDS-P-littoralis_Contig86:740..1178Pylaiella littoralis U1_48CDSP-littoralis_Contig86 741..1178 -
1680791729.3937244-CDS-P-littoralis_Contig86:1501..16301680791729.3937244-CDS-P-littoralis_Contig86:1501..1630Pylaiella littoralis U1_48CDSP-littoralis_Contig86 1502..1630 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791729.4052575-UTR-P-littoralis_Contig86:1630..20361680791729.4052575-UTR-P-littoralis_Contig86:1630..2036Pylaiella littoralis U1_48UTRP-littoralis_Contig86 1631..2036 -
1680791729.4195383-UTR-P-littoralis_Contig86:3889..42431680791729.4195383-UTR-P-littoralis_Contig86:3889..4243Pylaiella littoralis U1_48UTRP-littoralis_Contig86 3890..4243 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.2.1prot_P-littoralis_Contig86.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig86 741..1630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig86.2.1

>prot_P-littoralis_Contig86.2.1 ID=prot_P-littoralis_Contig86.2.1|Name=mRNA_P-littoralis_Contig86.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp
MQRWTGFRTDKQYTEKTFDVYNKDGTTPTLKGCYLIVNNGYHKWRTLIEP
SKYPLSVGDLLFSKRLESARKDVECFFGILKVRFRILKLAMTYQEQERID
YVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEHNVDSTSVGTK
DVNEKPQIEAGHALLKRQLTTSCLYRKQIKRDIVWLSR*
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mRNA from alignment at P-littoralis_Contig86:741..4243-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig86.2.1 ID=mRNA_P-littoralis_Contig86.2.1|Name=mRNA_P-littoralis_Contig86.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3503bp|location=Sequence derived from alignment at P-littoralis_Contig86:741..4243- (Pylaiella littoralis U1_48)
ATGGCCTTATGCCAGAAACTGCACTCGCAATCGCCTTGGCTGCTCTCGAT GAGATCCAACAAGACGACATGCTATCAGATGTGGAGGACGAGACCGCTGA GGAACTACCGCAAGTGAAGATGAGGCGATGACAGGCAGAGGAAAGACGGC AGCACGTGTGCTTGGGCACAGCTGCTCCGGGAGGAAGAGCTGCTGAAGGA CAGGACGAACATAGAAGCAAAGAAGTTTCGAGAGGGCTTTCGCATCCCGT ACCGTTTCTTCCTGCGGCTTGTGGAAGTGGTCAAGAGCAAGGACTGGTTT GCCACTGCTCAGCACGACGCATCAGGGCGGCAAGGCCACCCAGTGGAGCA TAAGGTGAGGTTAGGAGGTGCTTCACTCACTACTTTGGCAGTTGTACAGG TGGTGGAAGCAGTAGACTGTCTGCATACATGTCTTGCACTATGGAGATGT GAATTAAAAAAATCGTATTAAATATAGAGTGCTGCAGGTACTGCTTTATG ATATCATATGTATCATACACCAAGTACTTCGTATTATAGTCTACTTCGTT CAGAGATGCTGTACTTAGCAGCAACAGCGTTGCTTCCGTTCCTGTGTACG TATCATACATACGAGGATACAAAAAGGATGTGCCCGCCCCTCTTACAGCA CTAAAGCTGGTACACCTGTACAGCACTAGTGAGGCTGCAAACAATATTAC CGTTCTCTCGTTGATAGTCGATGGGCATTGCTGCATGTATTGGTATCGCG TTTTACTCGGGTGCAGGCAGTGCCTGGTTGCGTATTTGCTCGTTATCGTA GCGATCCCATAGCTGCGTAAAAAAGCCTTATTTTTCTCATGAAGCCTCAA CAACACAATGATACAGCGATATGATATGATACGATCTTCGTTTTTCTCCT TGATAAGCTACGTACCCGACAAGGTCCGTGTCCCTGTCAGCTGTCGCCTT CTAGAGCAGTACTGGTACTAGAATGTCGGTGCCGCGATGTTCTAGTGTGC AGGCAACTCCTGGATGCCGACATGAGCCGATTAGTATAAAATTATCACAC TAGTGATAAAATACTACAGTCAGAACACCACTCATGAGACCGTTTCTTAC GGCTCCGTTATTTGGTCCTGTGTTTTTTCTTCTGAGGTACCCCCCCCCCC AATAAAAGAGAGCCCAAACGATTGAAAAATATACTTCTTGAGCACAACAG GAGATAGCACCGAGCAGAACTCGACCCCTGGGACACCAATCGAGACTATA ACTGTTAGACGGTACGCTCTAGTGTTCTCAGGTTGGCCACAGGAAATTTG GTGGGTGTGGGCTTTGGCTGTGGCGAGGTTTCGGCGGCGGAGTGGGTTTA GGTAGGAAAATCCGGTGAAAAAAAAAACGCTGTCCGAGCCTATTTTTTGG CCGGAAAAACGGACCATAACTTCGTTTCATCTGTTTTTCCATCTCCGACA CACACCGCCGCCAAAATCTCGCCACAGCCCGAACACATGCCACCAAACTT CCTGTGGCCAACTTGAGAACGTAGGAGCACACGATCTATCAGGTTTGATT GGCATCTGTGTCGTAGGGGTCGAGTTCTGGTTGTTGCTGTCGTATGATGT GTGCAATGGCGATCAAAGCTATCGCCACGTCGCTTCAGTGTTCTGAGATT GGCCATGGCAAGTTTGATGGGTGTGGGCCTTAGCTGCTGTAAGATTTTGC CGGCGGTGGACGTCGTGGTAGAATAAACAATGCCAAAAGAATGCTGTTCG AGTAGGCTCGCGTAACAAAACAGGCTCGAACACAGCAGTCCACACATATT TTGTTTTTTTGTCATTGTTTGGGATACCTCAACCCACACCACCGCCAAAA CGAATTCGACACAGCAAAAGCCCACACCCACCAAACTCCCTTCGGCTAAA ACCTCAGCACACGGGAGTGCACGCTCCATCAGGTTTGATCGCCATCGCTG CGTGCCAGAGGTCAGGTTCCGGCTGGTGTTGCCGCGTGATGTGCTCAACA GTATTTTGTTCGGTCGTCAGGAATCTTCTCCGTTTTCGGGGGGGGGGGGA TCAAAATGATACAATACTCACGAAACCAGAACCGTATGACCAGCCTCACA TTGTTCTCACCTTCTTATTTTGATAAAGCACAACACCTTACATGACACCT TGTGGCTGATTGTGTGGATTCCCGTCCAATCGACAAATGTTGCGATTGGT GCTATAGGTGATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTGG GAAGCATCTACATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGACGACG TTCCACAAATTCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACAT CTTCCTCCCGACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGATAGT ACGAGAAGCTGGGGTTCCCGGGCGCAGTGGGTTCCACTGATGTTACTCAT ATAGCGTGGGGTAGGTGCCCCTACAAGCAAGCCCGCTCGTACACTGGAAA GGAAGGCAAGCCTACCATCGAGTACCAGGTGACGGTCAACCACGCTGGGC GCGTGTTGACGGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACG ATCATCTGCTGGGATGCAGCGGTGGACCGGATTTCGCACAGACAAGCAGT ACACGGAAAAGACATTTGACGTCTACAACAAGGATGGCACCACGCCAACC CTGAAGGGTTGCTACTTGATCGTCAACAACGGTTACCACAAGGTGAAAAA TGTTTGGTAAAACATGGAACGCGATTGTGTTTTTGTCGAATCGCATAGGC ATTTTTGGCCGAACAAAAGTTCCTCCCAGTTAGCCGCGCTCAAAATTGTC CCTCAGGTCCTCTTGGGTGCTGTGGACGTGATTGTGTGACACTGAATTGC TCCCCATAATGGTGTTGTTGAAGCTGTGGGGGGATAAAGCAGTTGACAAG TTTACACAGTTCGTTTAGTACCCAATCCTCAAAATGAAACGCGGTACAGG ACGAATTGGTAATACTTGATCATTCCAGGTGCACCTTTTTTTTTCTGTTC GTCTGTTCCATTCAGTGGCGGACGCTGATCGAGCCCTCCAAGTACCCGCT GAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGGAGAGCGCAAGGAAGG ATGTGGAGTGCTTCTTCGGCATTCTGAAGGTTCGCTTCAGAATCCTCAAG CTCGCGATGACCTACCAGGAGCAGGAGCGCATTGACTACGTGTTCTTCAC GTGCTGCATCCTGCACAACATGCTGCATACCTTCGACGGCATGGACGACC TGGAGGAGAACGTCAACTGGGTCAGCAGTGCCGAGCTCCAGAGCACGTGG GAGCACAACGTGGACTCCACCTCGGTCGGGACTAAGGATGTCAACGAGAA GCCCCAAATCGAGGCGGGGCACGCGCTGCTCAAGAGGCAGCTGACCACGA GCTGCCTGTACCGGAAGCAGATTAAGAGGGATATTGTTTGGCTTTCTAGG TGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig86:741..4243-

>mRNA_P-littoralis_Contig86.2.1 ID=mRNA_P-littoralis_Contig86.2.1|Name=mRNA_P-littoralis_Contig86.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig86:741..4243- (Pylaiella littoralis U1_48)
ATGCAGCGGTGGACCGGATTTCGCACAGACAAGCAGTACACGGAAAAGAC
ATTTGACGTCTACAACAAGGATGGCACCACGCCAACCCTGAAGGGTTGCT
ACTTGATCGTCAACAACGGTTACCACAAGTGGCGGACGCTGATCGAGCCC
TCCAAGTACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGGA
GAGCGCAAGGAAGGATGTGGAGTGCTTCTTCGGCATTCTGAAGGTTCGCT
TCAGAATCCTCAAGCTCGCGATGACCTACCAGGAGCAGGAGCGCATTGAC
TACGTGTTCTTCACGTGCTGCATCCTGCACAACATGCTGCATACCTTCGA
CGGCATGGACGACCTGGAGGAGAACGTCAACTGGGTCAGCAGTGCCGAGC
TCCAGAGCACGTGGGAGCACAACGTGGACTCCACCTCGGTCGGGACTAAG
GATGTCAACGAGAAGCCCCAAATCGAGGCGGGGCACGCGCTGCTCAAGAG
GCAGCTGACCACGAGCTGCCTGTACCGGAAGCAGATTAAGAGGGATATTG
TTTGGCTTTCTAGGTGA
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