mRNA_P-littoralis_Contig86.137.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig86.137.3
Unique NamemRNA_P-littoralis_Contig86.137.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A6H5JIL0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL0_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 3.760e-150
Identity = 225/292 (77.05%), Postives = 261/292 (89.38%), Query Frame = 2 
Query:  437 MTQAVSLSST-VGSGEPIPAVTTNKDAPASQELNRSKLGLHLKVGSKVINLYGLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDIPVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQKPKP 1309
            MT ++ L ST VG+GE +P  T    +P+++  +RS LG HLK+GSKVIN+YGLLFA QAW TA+LMFPLC L+ALV PIFDWRRMRPPT VA+LWGR+ L NMGVRPKVEG ELLPP G+AVVFVANHGSYLDIPV+N LPR+CKYLMKAELLWLPIVGWKAVLARDIFVHR T ++FR+LL+STTR+LKAGNSIMTFPEGTRSRDGRLG+FKRGPFTMAQ+ GV +VP+TITGVT+AMPPFAMAPL KPR+VRLVVHPAI TEG+P+K++IAEAR+AV+DGLEDWQKP+P
Sbjct:    1 MTHSLGLGSTAVGAGETLPTATAQDGSPSTRTFDRSNLGFHLKIGSKVINMYGLLFATQAWFTALLMFPLCLLSALVAPIFDWRRMRPPTAVAVLWGRLALWNMGVRPKVEGAELLPPRGEAVVFVANHGSYLDIPVTNCLPRMCKYLMKAELLWLPIVGWKAVLARDIFVHRGTSTTFRQLLRSTTRTLKAGNSIMTFPEGTRSRDGRLGKFKRGPFTMAQQAGVRVVPLTITGVTEAMPPFAMAPLCKPRSVRLVVHPAISTEGKPVKDLIAEARKAVSDGLEDWQKPRP 292
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A835YT11_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT11_9STRA)

HSP 1 Score: 249 bits (636), Expect = 6.910e-68
Identity = 129/266 (48.50%), Postives = 176/266 (66.17%), Query Frame = 2 
Query:  512 APASQELNRS-KLGLHLKVGSKVINLYGLLFAGQAWLTAVLMFPLCFLAALVGP-------IFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDIPVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGL 1285
            APA QE     K GLH+ +  + +N YGLL+A  + LT +L+FPL  +   +         + D +R+R  +    +W R++LL+MG+RPKVEGL  LPP  + VVF+ NH S+LD+PV+ FLPRL KYL KAEL W+P++GWKAVLA DI V R  +SSFRRL+   + SL+AGN ++ FPEGTRSR G L  FK+GPF MAQ+ GV +VP++I GV + MPP A+APL KP  V +V+H  +      ++  +  AR A+A GL
Sbjct:   93 APAQQESRPVVKTGLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPA-VTIVIHAPVDPAVEGVEGAMRSARAAIASGL 357
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S3Y5W9_HETAK (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5W9_HETAK)

HSP 1 Score: 202 bits (514), Expect = 2.300e-53
Identity = 111/280 (39.64%), Postives = 169/280 (60.36%), Query Frame = 2 
Query:  491 AVTTNKDAPASQELNRSKL---GLHLKVGSK--VINLYGLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTLLNMGVRPK-VEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQKPKP 1309
            A +T   AP  Q +   +L   G+H+K+G K  ++N+ G  F     LT  L+FP   L+ L    FD RR R        W ++++L++  RPK + G E LP + + V+++ANH S+LDI  +S FLPR  KY+ K E+L +P++GW   +A  I V R  + S    +KST +SLK GNS+  FPEGTR++ GR+G FK+GPFT+A++ G  +VP+++  VT   P +A+ PL +P +VR+V+HP I  +     E++  A  A+  GL D+Q+P P
Sbjct:   64 AASTAAAAPLEQSVEGQQLVPYGIHMKLGKKKRILNITGFFFLFNTMLTCALLFPFTVLSYLWAMAFDRRRRRAVDNCVHWWAKLSMLSVFYRPKEIVGAEHLPDDAEGVLYLANHTSFLDILTLSGFLPRNFKYVSKVEILKIPLIGWAMQMAAHIAVRRMDRRSQIETVKSTIQSLKDGNSVTMFPEGTRTKTGRMGDFKKGPFTIAKKAGARVVPISLCNVTKWFPSWAVMPLGRPTDVRVVIHPPIDPKDLTEAELMERAFAAIESGLPDFQRPLP 343
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A8J5X9N9_DIALT (PlsC domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9N9_DIALT)

HSP 1 Score: 196 bits (499), Expect = 3.880e-52
Identity = 109/248 (43.95%), Postives = 150/248 (60.48%), Query Frame = 2 
Query:  563 VGSKVINLYGLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTL-LNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQK 1300
            VGSKV+NLY + F     L+  + +PL  +A+    +FD +R R    V  LW R+ L L    R +VEG E LP  GQ  +F  NH S+LDI  +S FLPR  KY+ K E+L +P++GW   LA  I + R  + S     + +   LK GN+++TFPEGTRS  G LGQFK GPF MA   GVP+VP++I     AMP  ++ P+R+   +R+VVHP I T+GR   ++ AEAR AV+ GL +W +
Sbjct:   74 VGSKVLNLYSVFFLVLNVLSLCVAYPLLAVASAWSFLFDRKRRRAIDAVVALWARLCLTLFFFSRVRVEGAEHLPARGQPALFTPNHCSFLDIFALSGFLPRPLKYVSKVEILRIPLIGWAMQLAGHIALRRADRKSQLATFRDSVACLKDGNNLVTFPEGTRSPTGVLGQFKAGPFKMAATAGVPVVPISIVNTQYAMPVSSLLPIRRASGMRIVVHPPIATQGRDSADLCAEARAAVSSGLPEWMR 321
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S3ZJV5_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJV5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.130e-48
Identity = 105/242 (43.39%), Postives = 138/242 (57.02%), Query Frame = 2 
Query:  551 LHLKVGSKVINLYGLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAV 1273
            L LK+G K INL GL F     +  + ++PL    A+   +FD ++ RP   +  LW R ++L    RPKV G E LP +G  V+ V NH SYLDI  +S F+PR  KY+ K E+L +P +GW    A  I + R  + S     K T  SLK GNS++ F EGTRS DG L +FKRGPF MA    V +VPV +  +    PP A+ PL  PR V L V P IPT G+   +V+AE + AV
Sbjct:   47 LALKLGGKSINLTGLWFGASMTIWVIALYPLVLTCAITSRLFDPKKRRPMDFMVWLWARCSMLTCLYRPKVTGKENLPEKGVPVLIVPNHCSYLDILTLSAFMPRPFKYISKIEILRIPFIGWAMGFAGHIALRRADRRSQLETFKDTVESLKNGNSVVAFAEGTRSADGTLQKFKRGPFKMATTAEVDVVPVALCDLHKWHPPSALMPLAVPRGVELKVLPTIPTAGKAPDDVMAECQAAV 288
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S1U818_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U818_9STRA)

HSP 1 Score: 181 bits (460), Expect = 8.050e-47
Identity = 105/258 (40.70%), Postives = 153/258 (59.30%), Query Frame = 2 
Query:  542 KLGLHLKVGSKVINLYGLLFAGQAWLTAVLMFPLCFLAALVG-PIFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQKPKP 1309
            K G  L +G K + L GL + G +   A L++ L   A ++     + +R      V  LW    +  MG + +V GLE LPP  + ++ V NH S+LDI  +S ++PR  KY+ K E+L LP++GW   +A+ I + R +++S  R LK    S+K GNS++TF EGTRS+DGRL +FK+GPFTM +R GV IVPV+I G+    P +A  PL  P+ V L +HP I T+GR   +V+ E   AV  G+ + Q+P P
Sbjct:   69 KHGPALTLGGKKLTLMGLAYFGVSMTFAALVYALLIPAWILDFATGERKRNGRVDKVVRLWAWAAMRLMGYKAEVIGLENLPPASEPIMVVPNHTSFLDIFTISAYVPRNLKYISKVEILRLPLIGWAMRMAKHIAIRRSSRASQIRTLKEAVDSMKDGNSLVTFAEGTRSKDGRLMRFKKGPFTMTKRAGVRIVPVSIRGLYKWHPKWAWLPLATPKGVTLKIHPPIETKGRNADDVLEETYNAVLSGMPEDQRPLP 326
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S2B9X1_9EUKA (1-acyl-sn-glycerol-3-phosphate acyltransferase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B9X1_9EUKA)

HSP 1 Score: 177 bits (450), Expect = 1.050e-46
Identity = 93/209 (44.50%), Postives = 129/209 (61.72%), Query Frame = 2 
Query:  596 LFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDIPV-SNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAI 1219
            LF+    L  + ++P    A L G +FD +R R    V   W R T++  G + +V GLE LPP  + V++  NH S+LDI V S +LPR CKY+ K E+L +P++GW    A+ I + R  ++S  + LK    +LK GNS++TFPEGTRS+DGRL  FK+G FTMA R GV +VP+TI G     PP A  PL  PR VR+++HP +
Sbjct:   26 LFSVVTVLVLLAVYPFVLSAVLFGILFDNKRRRFVDRVVQAWARGTMVFFGAKIQVFGLENLPPIDEPVMYTPNHCSFLDIFVLSGYLPRPCKYISKIEILRIPLIGWAMAFAKHIAIRRMDRASQLKTLKDAIETLKDGNSLVTFPEGTRSKDGRLLDFKKGAFTMASRAGVRVVPITIVGTHLYQPPGAFVPLAVPRGVRIIIHPPL 234
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S2UXA9_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA9_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.960e-46
Identity = 92/199 (46.23%), Postives = 132/199 (66.33%), Query Frame = 2 
Query:  707 VALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQK 1300
            V  +W R+++L+M  +PKVEGLE LPP+ + VVF+ANH S+LDI  +S FLPR  KY+ K E+L +P++GW    A  I + R + +S  ++ +   +SLK GNS+  FPEG+R+RDGR+   K+GPFT+A+R GV IVPV++  +    PP A  PL  P++  L +HP I T+G+   EV+   R A+  GL DWQK
Sbjct:  149 VVSIWARLSMLSMFYKPKVEGLENLPPKDETVVFMANHQSFLDIFTLSGFLPRRFKYISKVEILRIPLIGWAMNFAGHIAIQRASVASQIQVFRDAIKSLKDGNSVCIFPEGSRTRDGRMLPLKKGPFTIAKRAGVRIVPVSLGELFRYNPPSAWLPLGIPKDAVLKIHPPIETKGKSEAEVMELVRIAINSGLPDWQK 347
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: M1V4N2_CYAM1 (1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V4N2_CYAM1)

HSP 1 Score: 178 bits (451), Expect = 3.560e-45
Identity = 98/240 (40.83%), Postives = 143/240 (59.58%), Query Frame = 2 
Query:  578 INLYGLLFAGQAWLTAVLMFPLCFLAALVGP---IFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDIPVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRN-VRLVVHPAIPTEGRPIKEVIAEARRAVADGL 1285
            INL G+ F     +T     PL  +  ++ P   I D  R R    +A+LW R+++L+ G+ P+V G E L P    V++V NH SYLDI    FL R  K++ K  +  +PI+GW   +AR I + R ++    R+ +     L+ G S++ FPEGTRS+DG L  FK+GPF +A++ GVPIVP+TITG  + MPP+A+APLR P+  + L +HPAI T    + ++I  AR A+A  L
Sbjct:  130 INLVGVFFL---LVTFAWSLPLFIIMLILYPFVLILDPYRARVYDWIAMLWMRLSMLSTGIHPRVVGTENLLPPDATVLYVCNHNSYLDIYTVAFLGRFFKFVSKRSIFAIPIIGWAMGMARQIGIERDSRRDQLRVFREMVSRLEHGVSLLLFPEGTRSKDGTLRAFKQGPFRVAKQAGVPIVPLTITGTAEVMPPWALAPLRWPKQRITLTIHPAIQTADHSVTDLIEAARTAIASAL 366
[Close]
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Match: A0A7S4JRU4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JRU4_9EUKA)

HSP 1 Score: 174 bits (440), Expect = 3.140e-44
Identity = 94/244 (38.52%), Postives = 142/244 (58.20%), Query Frame = 2 
Query:  590 GLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWGRMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDI-PVSNFLPRLCKYLMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIMTFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAPLRKPRNVRLVVHPAIPTE-GRPIKEVIAEARRAVADGLEDWQKPKPDD 1315
            GL FA   + +A++++P      +     D +R R    +   W R+TL+ M     VEG+E LPP  +AV++  NH S+LDI  +S +L R  KY+ K E+L +P++GW    A+ I + R  ++S  + LK     L  G+S++TFPEGTRS+DGRL  FK+GPFTMA R GV +VP++I G     PP +++P   PR +R+VVHPA+P+   +  +E +   R A+   L     P P +
Sbjct:   83 GLWFAIACFSSALIVYPPLICITIASIFVDKKRRRYNDWIVQAWARLTLIAMRASVTVEGIENLPPYNEAVLYAPNHCSFLDIFALSGYLGRRFKYVSKIEILRIPLIGWAMQFAKHIAIRRSDRASQMQTLKDAIACLSDGSSLVTFPEGTRSKDGRLLDFKKGPFTMASRAGVRVVPISIIGTHVYQPPSSLSPYSWPRGIRIVVHPALPSPPAKKEQETLELTRAAIESALHPSMLPLPKE 326
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.137.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIL0_9PHAE3.760e-15077.05PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YT11_9STRA6.910e-6848.50PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3Y5W9_HETAK2.300e-5339.641-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A8J5X9N9_DIALT3.880e-5243.95PlsC domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S3ZJV5_9STRA1.130e-4843.391-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S1U818_9STRA8.050e-4740.70Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2B9X1_9EUKA1.050e-4644.501-acyl-sn-glycerol-3-phosphate acyltransferase (Fr... [more]
A0A7S2UXA9_9STRA1.960e-4646.231-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
M1V4N2_CYAM13.560e-4540.831-acylglycerol-3-phosphate O-acyltransferase n=1 T... [more]
A0A7S4JRU4_9EUKA3.140e-4438.52Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:496023..503734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTF6
PFAMsAcyltransferase
Model size3838
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categorychloroplast
Exons5
Evalue4.28e-165
EggNOG OGsCOG0204@1|root,KOG2848@2759|Eukaryota
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-02_006160.1
EC2.3.1.51
Description1-acylglycerol-3-phosphate O-acyltransferase activity
Cds size1071
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.137.3prot_P-littoralis_Contig86.137.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig86 496297..501241 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791735.1308098-UTR-P-littoralis_Contig86:496022..4962961680791735.1308098-UTR-P-littoralis_Contig86:496022..496296Pylaiella littoralis U1_48UTRP-littoralis_Contig86 496023..496296 +
1680791735.2117836-UTR-P-littoralis_Contig86:501241..5037341680791735.2117836-UTR-P-littoralis_Contig86:501241..503734Pylaiella littoralis U1_48UTRP-littoralis_Contig86 501242..503734 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791735.1462846-CDS-P-littoralis_Contig86:496296..4966071680791735.1462846-CDS-P-littoralis_Contig86:496296..496607Pylaiella littoralis U1_48CDSP-littoralis_Contig86 496297..496607 +
1680791735.1584735-CDS-P-littoralis_Contig86:497951..4982371680791735.1584735-CDS-P-littoralis_Contig86:497951..498237Pylaiella littoralis U1_48CDSP-littoralis_Contig86 497952..498237 +
1680791735.1719189-CDS-P-littoralis_Contig86:499164..4993271680791735.1719189-CDS-P-littoralis_Contig86:499164..499327Pylaiella littoralis U1_48CDSP-littoralis_Contig86 499165..499327 +
1680791735.1834364-CDS-P-littoralis_Contig86:499815..4999641680791735.1834364-CDS-P-littoralis_Contig86:499815..499964Pylaiella littoralis U1_48CDSP-littoralis_Contig86 499816..499964 +
1680791735.1973395-CDS-P-littoralis_Contig86:501079..5012411680791735.1973395-CDS-P-littoralis_Contig86:501079..501241Pylaiella littoralis U1_48CDSP-littoralis_Contig86 501080..501241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig86.137.3

>prot_P-littoralis_Contig86.137.3 ID=prot_P-littoralis_Contig86.137.3|Name=mRNA_P-littoralis_Contig86.137.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=357bp
MKAMMICLIALMLPFPAFTFIAPSVVRPPASIKTRHRILATSPRRAGTRA
PAVLMTQAVSLSSTVGSGEPIPAVTTNKDAPASQELNRSKLGLHLKVGSK
VINLYGLLFAGQAWLTAVLMFPLCFLAALVGPIFDWRRMRPPTLVALLWG
RMTLLNMGVRPKVEGLELLPPEGQAVVFVANHGSYLDIPVSNFLPRLCKY
LMKAELLWLPIVGWKAVLARDIFVHRQTQSSFRRLLKSTTRSLKAGNSIM
TFPEGTRSRDGRLGQFKRGPFTMAQRVGVPIVPVTITGVTDAMPPFAMAP
LRKPRNVRLVVHPAIPTEGRPIKEVIAEARRAVADGLEDWQKPKPDDPPP
PTPPSQ*
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mRNA from alignment at P-littoralis_Contig86:496023..503734+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig86.137.3 ID=mRNA_P-littoralis_Contig86.137.3|Name=mRNA_P-littoralis_Contig86.137.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=7712bp|location=Sequence derived from alignment at P-littoralis_Contig86:496023..503734+ (Pylaiella littoralis U1_48)
CAGGGGTGGCACTTTTTGGATCGGCACGATACAGCGCGGCGTTGAAGGAT
TTACCCGAAACCCGACGCGGAGCAATGACTGGGGGTATGATTCCATGATT
ACATTTTGGGTGCATAAAAAAAAAATCGCGATTTTTCTATAGAGGCCAAC
AGGTGTGACAAAGTACAGTATTTTTTTTCTTCACTCGGTGTGCAGACCGG
GTGTGCAGCATGCTGTCGTAAGCCGGTCCGGTCTTCGCTTTCATTCTCTG
CCACCTTGGCTGTCTGTCCACGTCATGAAGGCCATGATGATTTGCCTGAT
CGCTTTGATGCTTCCCTTTCCAGCCTTCACCTTCATCGCACCCTCGGTCG
TTCGGCCGCCGGCTTCAATCAAGACTCGCCATCGCATTCTAGCAACATCA
CCGAGGAGAGCAGGAACAAGGGCACCAGCAGTGCTCATGACTCAAGCTGT
CAGCTTGTCTAGCACAGTAGGGAGTGGAGAGCCGATACCCGCCGTGACGA
CGAATAAGGACGCCCCCGCCTCACAGGAGTTAAATCGCTCCAAACTCGGG
CTTCACCTCAAAGTTGGCTCTAAAGTTATAAACCTGTGAGTCGTGCATGT
GGGATGTTTAGTCCATCAATCATGTAAATTAGCCAGCAGTGCAACAAGAT
TGGCGTGCGAGTGAGAAGTCTCTTCTTTCTTGTACTCCGTACAAACGAAC
AGTCATATAATTTGTAGGTGCCCCGTTCGTATACTACAACAACAACAACA
AGCGATATGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGA
GCTAATGTGAGAATCAACGACAACAACTTCGAAGTACATATGTAAAATAT
ACAACGAAGTGAACCTTTACTGAAGTTCGAGGCTCGTTGAAGCCTATTTA
TCACACGTACTTGTTCTCCGTCATTTATAGGCAACACAAGAGCCATACTG
CTGTTGTAGCCGTGAGCGATCGCGACATCAGATGGGCAGAGAACTCCCCC
GACAAATTTGGTGGTACAAGCATGAACATGCGTGCGTCGTTTTTGTGTTG
TCGTGTTGTCGTGTTCTTCTCCTCCTCGCGAGACAGAAAATTCCTGGATT
TTTTGAAAACATTTTTTCTATCTTTTTGACGCAGTACTACGTACTGCAGC
TGGGTGCAGGAGTGCGTCTTGGTACTCCAGCTCTGTTACTGCTGTACCAT
CGTCCAGCAGTTTACTGCGATAGCATCCCACAGCTGATTGAGAGTTGACT
TTGGGGCGTTCTGTTTCAGAACAGAATTCCAAAGTCAACTCTCGTTCTAG
TCACGAGCCAGCCCTTCGCAGGCAGGCAGCACAGCTACAGACCGTATGGT
CCTGTATGAGATACACTGTTTTTGTGCCTGCATTTGGAATCAAGCCGTGT
CGTTAGAGCATGTACACTCTGTCTGCTGCTTTAGCGAGGCAGTCCTTTTC
AACAAGAGAGCTCAAGGCATTTTCTCTGTCTCGTTAGTTTGAGTGTGTTC
GTCGCTTTTCCCGCGGCAGCTGCAGGTATTCTCTACAGGTACGAAGTACT
TACCGTCGGAACAGACACACGGCAGCAGTGAACGGTTATTTGATTCCGTG
GTGTGAGCTAGCTTTCCATCGTGCGGGACGAGTTCCTTGCGACAAGCGAC
GGGGTGTTCGACTGATGGTCACGTCCAAAATTCCACGTAGTCTTCTATCT
TTGTCGCAACGTGGCGCTGGAACTTAATTCCCCCGCGATACCCCCCCGCA
CAAACACTTCCCAACAAACTTAAACCTTGTCACCTGTCGTCGTCTTCAAA
ACAACAGCAGTAACAAATTCGATTCGATTCGTTTCGTTCACCGCAGCAGA
GAAACTACGCAGCCAGGTGCATACCATCCGCCAGCACTGAGCCCCCGCCC
CCCGCCCTGTCGCTCCAACAACACCACAGGTACGGATTGCTTTTTGCGGG
ACAGGCATGGCTCACCGCCGTCCTGATGTTCCCCTTGTGTTTCCTAGCTG
CCCTAGTGGGGCCGATCTTCGACTGGCGACGAATGCGACCGCCGACGCTG
GTGGCGCTGCTGTGGGGCCGCATGACGTTGCTGAACATGGGGGTCAGGCC
GAAGGTCGAAGGGTTGGAGCTGCTGCCACCGGAGGGGCAAGCGGTGGTGT
TTGTGGCGAACCATGGGTCGTACCTCGATATTCCGGTTTCGAACTTTCTG
CCCCGTCTATGCAAGGTACTTTCAACTATGGCTCAAGAGAACGCTATGAG
TCTTGTTAAAGCAGAGGTGAAACGTTAGTTTGGAACAAGGCAGGTGGTCC
CGAGGTAGAACCCGAAGAGTCACTGAACCCCCTGCGTGGTAGTTTTTCTT
GGCGCGTGGGTATGATACTAGTTGCGTGCACATTCGGCTTGGTGTGTGCA
CTGCTGTGTGTTGATAACATGGGTTGAGATGGGATGGGATGAGGCGAGGT
GGGACGGGGAAGGGTCTGGAAGGGAGAGACTTACGGTACTTCACCGCGCG
TCCGTCTGCGTAGAGACGGGGGGGGTTGGGGGGGGGGGGAGCTTCCCCGC
ACCCGCAGGTGCAGTACGAATACAATATTTTATCTCGTCCAGTCGATCAA
CCTCAAAATTCCCAAGCTTTGAAACGATGCTGCTGCACACGTGCGTTTGG
GATCCCAAGTGTAGGCCTTGATATGGTGCTACGATACACATGTGCGATTG
GGAGTTGGAGTTGGCGTTGGTTTTAGGGTGAGAGAAAAACGGCGCGGTCG
CTACTTCACCACGGCAACAATACTTACTTCCCTGCAAGACACACCGCTGC
TGCAGCTCGGGCGGGTCGACCATACCGCTCCCGTTTTTAGCGACAGCGGT
TGCCAAGGGTTGATTCTCGAGTTGCGTTCTTGGACCCTTCTCCGACTGGC
ATATGGAACATCGAACAACCATGCGCATTCACCCATCCAACCACCGGATT
GCAATTCTTCTCCTCACCTTGGTGTGATTTCACGTCGGTGAGCATTTCTC
TTCGTCTTCCCCGCTCAAAAAACGCCTACAAACACCTAGAACGCCTGTAC
GTTTCTGGCGCTGTCGGTACTTTTTCACCTGCCCCCCCCCTCTAAACGCG
TAACTGGATTGTTGTGAATGGATTTCTGGTGTTATCATTCAGTACCTCAT
GAAGGCGGAGCTACTGTGGCTGCCGATCGTGGGATGGAAGGCGGTTTTGG
CCAGGGACATTTTCGTGCACAGACAGACGCAGTCATCCTTCCGTCGATTA
CTCAAGTCCACCACACGCTCGCTTAAGGCGGGCAACTCCATCATGACTTT
CCCCGGTACGGCTTTAGTCAACACTGCTACATACTGCTCGCCGTAGGCAT
TGAGCTTTCCCAACGGGGGAGTAAACATGCATTGAAAGTTGTTATTACAT
GAAAATTGTTAGAATGATTTTGGGTGAAACGATCCCCATGGGAGGAATGC
TGGGGTGGGGGGGTATTATAAAAAATTCAGCCAGTTTGCGCCGGGAAGCA
GGGAGAGAGAAGTGAAAGCTTCATTTTTGTGCTGGAAAATTTTCAGCAAT
TCAACTGGCTGTCACATGGGGTAAGCTGTGACCCAATAGTTCGTGGATAC
GGGCCAAGCAGGCCTCACACCTGAACCTGATACTTGTAGTCGATAGTTTT
CCGAGCCGACCCCAACCCGTGTCGTTGCTCTCTTGGCTGCCTTCCGCACC
GCACCCTCAAAACGTTGTTGCTATTGCCAATCCCTTGGTCTTCAACGTCC
CTGTTTGACCTCGCCTCCATTTCTACTCGTGTGTCGCATCCAGAGGGAAC
TCGCAGCCGAGACGGGCGGTTAGGGCAGTTCAAGCGCGGCCCTTTCACCA
TGGCGCAGCGGGTAGGAGTGCCGATCGTCCCGGTGACCATCACGGGAGTG
ACAGACGCGATGCCGCCGTTCGCCATGGCCCCTCTGCGCAAGGTGATTGA
CCACAGAAATAAGCTACGTCGTAGGCATACAGCAGTACCTGTATATTCTA
CAACATCCATCCTTTTAACTCGAGGCTGCATCAAGGCTTGACCTTGCGAC
TCCTCCGGTTCGATTTTTTTAATCATATTGTACGTATGATATGATGGGGG
TATTTCGTGTTCGGTGGGATGTGTCGCCACAGCACAGAGTCTTCTGAGCG
CGGCCCTGCCGGACGCGTCGGCAGGCCTGCCGTTGTACAAACACCGTCCG
CCTTGTGTGTCATCCACAGCAGTCCGGGGTTAAGATCCATGGCCGATACG
AGTAATGTTCTGCATTGGGTCTCATCCTCATCCACGAGGAATCCCAAGTT
GTTACCGCGCTAGCTAGCTATGATTCCTACTTTTTCATCTCATGGCAACT
GGTGCTGGCGATAGTCCCGCGGCTGCTGGTCCTGCGACTTTGGTTTTCGA
TCCAAAACACCGAGTTGCCGAAATAAATATTGTTCGGTGTTTTGAGACAG
GGCTTGAAGACGGACTCTTGCGCTTGTGGCACCCGTCGCCACCACTGCTG
TAGAACCAACCCAAAACTGGTTGTGGTGTTGTTGCCTCACGCGACGAATC
CAATTCGAAGCAGCTGTATTCCACAGATGCTCGTCTCTGTCCTCGATACG
ATAACTCTGGTGTAGCAGGTACCGTACGAGAGAGCAGCACTTCTACCTTC
CAAGTATTTAGTGCCCAGCACCTGCTGTTGCTGCAGTTAGGTGGTCCCCA
ACTGGCGAACGCAGACCCTCCCCTGCGGCGTTCGAGAGGTGACGAGCACT
GTTTGGAGTCTTGATAAAATATCGCGCATCATTTTGCAAACACGTACCCT
CCTTCCCTCCCGCTCGACGAATTCCCCTGGGTGATCTACCCCGGCCACAA
TTCGAGATGCCACGTGCACTTCTCACACTGAATTCATCCGTCGACCCGTG
GATGTGCGTGGCAATTATCTCACAGTATGTACCCCGTCCGTGCGTCCGTG
TGTTGTTCTTGTCTATTGTGTTGTTTTGTTTCGCGTGTCCCTCGTTGGCT
TGTCGCCGGTTTGTATCTCCATTGCCCGAATCGAATCGAATCGAATCGAA
CGGTCAGCCTCGAAACGTCCGGCTGGTTGTCCACCCGGCGATACCGACGG
AGGGGAGGCCGATAAAGGAAGTCATAGCGGAGGCCCGAAGAGCCGTTGCC
GACGGATTGGAAGACTGGCAAAAACCAAAGCCCGATGACCCGCCGCCACC
TACCCCACCATCCCAGTGAGGTTCCCGGGCTCTCGTTGTACATGCCATGC
CGGGTTGTATTGTTGCTGTCTCTCCCTTTTCCCACGGAAGGTTGTTGGCT
GGTCCCTTTCCGTCCCTACGAGGTTGGCCGATAGAGCGTAAGTATGCGTT
GTTTTTGTCATTCGCGGGCGTTTTCTGAGGTGGTATATATGATACTACGC
TTTTACGAAGGCGCCCCCCCCCCCCCCCGCAGAGTCGTTTTCGGCAGGAT
AATTTTTGATCGTTTGGAGAGTTGTCGTAGTTTCTCTTACTTATTTCCGT
TGAACCCGGAAGGACGCTGTGCGCATTGATAGAGGTGCTTGGTGCCCAGA
GTTCTCTTGTTGTTCCTGTAAAATATCCAGGAAAATGATGTCACTGTTCT
GGGTAACACCGGACCGCCGGTCGACTCGGGCTTTCAACCGATCAGAAATT
ACCTGTAAAAATATTGACCGAAACGTGTGATATTCTATGCGTCCTCTACA
ACTGGTGGGTAGGCTGCCATGTCCCCTCTGTGTCCGTTCGCGGCGCGGTG
GAGTTCTTGTCGCACGTCGGGTCTTGACGCGCACTGTGCGGTGCAGCATG
CCTGACTTGATTCCACTCCCGGCTGCGTTTCGCCGACAGCGGTACTTGTA
ACGGGGTATGTATGGTCCGGCACATGCGCAGGACGTGTTGTCGCGCTTGT
GGCCTTGGGGTGGTACCGTTTTTTGCCTTGCCTGTAGTCTTCGGACGACG
CGTGCGTTGTTCCTACATAAATCCAGTTATCCTTTTTTTTGTTTTTGTTT
TTTCCCAGTAGATTTCGAGGACAAACAAGAAGGGTGTAGAGAATTCTTGC
CGCTGGTTGCGTGGATACAGACATTGCCGCATGCAAGGTAAATTATACCA
ACCTGGGGGTCCTTGGAAGATGGAGGCCGTCCACTGGTGGTTGTTGCCGG
CCCAATAGCATTCCCTGCTGTGGTGTTGAGAAGGGAGTTTCCTATAGAAG
AGAGGGTATCGAGAGAGAGAAAAATTGCCTGCAGTTTTCTGGTTGTTCAA
TTTTTTAGAACAAGGTGATACCGCCCTACACGACGTTACCGGTCCACCAG
GAATTTTCAGCTGATCAGTAATTTCCTTGGAACAGAATTGACCAACCAGA
AAACTGCGGGCACCTTTTCTCTGTCTGTTGTAGATGTTGCGAATATGCTG
GACAGATTTGCCGGTCGGACTGCCCTTGCTGCTCTACAATAAGAGGCACG
ATAGAGGCGTAGAAGGTGGAAGGGTAGATCTCTACGTAATGTTACGCATC
ACATACGCCACCAAATTCTTACAGGATGAACGGAGGCGGTTTTGGGAGCG
CCCGGTGTACGGCGGTTAAAAAAACAGTATAATTTTAAACAGGAGGTAGG
TTTCTAGATGGGCCCAACAAAGATTTTCCAGAGTAGTTTGGTTTTGTTGT
ATATCAGGAGGTTGGGCATGCCCCGCCGGTTCGTACGGTATATATTCGAG
TTTGTCGGGGCCAGGGGACGGTTGAATCCATTCCCGTAGATGTCCTGTCG
TGTGCTTCCTTCCCATCAGCTTGTTGTTTTTCGTTTTACTGCTGCCCCCC
TTTTTTTTCTTTTCAATTGTGCGCGCGCATGCTTTAACCTCTTGATGCTA
TGCGCGAGGAGCATCGACCGGATCACGGAGTCAATTTACCGTGTGTTCTT
CTTTATTTAACAAGTGTGTGGGTGTGTCTTCTCTTTTTGGCAATTAAGTA
GCAACGACAGGAGGGCATCTGCGTCTAGGTAGTATACGCTTTCAACAGCG
GGTGGTTTTTACTGTGCAGCCCGGTGGGGTTGTGCATCTTGCAGTACAGG
TATGATACTGGACTCGGTTGGGAGATTGGTGGCGTTTCGGTAGAAAAAGC
ACGAATGAAATCTCGACGAGACGTCGACCCCTGGCGAGCGCAGAGAACGC
CGAACCTCCTTTTGCGTGCGAGGTACCTGGTCGCAGGTAGACGGAGCAAA
TTGCTGCCTCGGGAATAAAGGCCGGGCTGTATGTTCACCGAGCAGCCACC
AGCAACGTTTACGAAATAGGCCCGACTCCTTGTGTGGCTTCGGTTACGCA
AGAATCGACAGCTATAGATATTTCAGTATTATGTTTTGGTTTGCCTTTAG
ACGATCTTTATTCCTGTAGGTATGTACGGCAGCCTGTTGTAACGAAGGTT
TCAAGCATGGCCTCGCCTCGCCGGATGTTTCCCTCAAGAGTTTGCGAAAA
TAAATAGGCAAAACCAAGGCAAAGTCAATGCTGCCTCTTTTTGTTCCCGG
GTTAGTGCAAGTCCGGAGAAGGGGGCGTGCCGTTCGTGCATGTTGCTCGC
CGTCCAAATGGACCTGGAGGACAACATCGCGAGGGGGCAGAGGAGGAACC
AACCCAAAGCAAGCAAGCAGAGCCAAGAGCCTCCTGTGGACCGGTTCCAT
CAAAAAGTGATCGGCCGGTTTTTGGCTTGGCACCAAACCAAAACACGAAC
GAAAGAGAAGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig86:496023..503734+

>mRNA_P-littoralis_Contig86.137.3 ID=mRNA_P-littoralis_Contig86.137.3|Name=mRNA_P-littoralis_Contig86.137.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1071bp|location=Sequence derived from alignment at P-littoralis_Contig86:496023..503734+ (Pylaiella littoralis U1_48)
ATGAAGGCCATGATGATTTGCCTGATCGCTTTGATGCTTCCCTTTCCAGC
CTTCACCTTCATCGCACCCTCGGTCGTTCGGCCGCCGGCTTCAATCAAGA
CTCGCCATCGCATTCTAGCAACATCACCGAGGAGAGCAGGAACAAGGGCA
CCAGCAGTGCTCATGACTCAAGCTGTCAGCTTGTCTAGCACAGTAGGGAG
TGGAGAGCCGATACCCGCCGTGACGACGAATAAGGACGCCCCCGCCTCAC
AGGAGTTAAATCGCTCCAAACTCGGGCTTCACCTCAAAGTTGGCTCTAAA
GTTATAAACCTGTACGGATTGCTTTTTGCGGGACAGGCATGGCTCACCGC
CGTCCTGATGTTCCCCTTGTGTTTCCTAGCTGCCCTAGTGGGGCCGATCT
TCGACTGGCGACGAATGCGACCGCCGACGCTGGTGGCGCTGCTGTGGGGC
CGCATGACGTTGCTGAACATGGGGGTCAGGCCGAAGGTCGAAGGGTTGGA
GCTGCTGCCACCGGAGGGGCAAGCGGTGGTGTTTGTGGCGAACCATGGGT
CGTACCTCGATATTCCGGTTTCGAACTTTCTGCCCCGTCTATGCAAGTAC
CTCATGAAGGCGGAGCTACTGTGGCTGCCGATCGTGGGATGGAAGGCGGT
TTTGGCCAGGGACATTTTCGTGCACAGACAGACGCAGTCATCCTTCCGTC
GATTACTCAAGTCCACCACACGCTCGCTTAAGGCGGGCAACTCCATCATG
ACTTTCCCCGAGGGAACTCGCAGCCGAGACGGGCGGTTAGGGCAGTTCAA
GCGCGGCCCTTTCACCATGGCGCAGCGGGTAGGAGTGCCGATCGTCCCGG
TGACCATCACGGGAGTGACAGACGCGATGCCGCCGTTCGCCATGGCCCCT
CTGCGCAAGCCTCGAAACGTCCGGCTGGTTGTCCACCCGGCGATACCGAC
GGAGGGGAGGCCGATAAAGGAAGTCATAGCGGAGGCCCGAAGAGCCGTTG
CCGACGGATTGGAAGACTGGCAAAAACCAAAGCCCGATGACCCGCCGCCA
CCTACCCCACCATCCCAGTGA
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