mRNA_P-littoralis_Contig86.12.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig86.12.3
Unique NamemRNA_P-littoralis_Contig86.12.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: D8LTE6_ECTSI (GSCFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE6_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 6.860e-204
Identity = 286/353 (81.02%), Postives = 316/353 (89.52%), Query Frame = 1
Query:  262 MSSNSFRTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAG-LVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDDERGFFEAQILE 1317
            M S SFRTEVHIP WP+H+QLGYADSF LLGSCFSDNI   LS AK  TS+NP+HGLLFSPL+AAA+LDRM+SGVPYEED  G LVF EG  LWSSL HHS FSSTSR+ CL GMNAALAKGR DL SASCIF+TLGTAWVFRHRESGKDVANCHKLP Y FDRRIVSVDEIAQALHR+LSN+LRANP  R+LLTVSPVRHWRDG+VENSRSKAHL+AGAHAAI+ LR++G+GEG G GG G V+YFPS+EIVNDDLRDYRF+ESDMIHP+GVAV+YIW+KL  AMFSDDA+RTMQEV KVVQGT+HRPFNPKSDAHQ FLRKQL+KVDNLER+YP L LDDERGFF+AQ+LE
Sbjct:    1 MDSISFRTEVHIPTWPQHSQLGYADSFLLLGSCFSDNIGTRLSNAKFQTSINPSHGLLFSPLSAAAALDRMVSGVPYEEDAEGVLVFSEGKGLWSSLEHHSCFSSTSRKDCLRGMNAALAKGREDLLSASCIFITLGTAWVFRHRESGKDVANCHKLPGYQFDRRIVSVDEIAQALHRALSNMLRANPNARVLLTVSPVRHWRDGAVENSRSKAHLLAGAHAAIDSLRAAGVGEGEGDGGPGRVAYFPSYEIVNDDLRDYRFFESDMIHPSGVAVDYIWDKLTGAMFSDDAMRTMQEVQKVVQGTEHRPFNPKSDAHQKFLRKQLLKVDNLERRYPGLKLDDERGFFQAQVLE 353          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A835YTW4_9STRA (GSCFA family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW4_9STRA)

HSP 1 Score: 290 bits (743), Expect = 3.720e-87
Identity = 160/353 (45.33%), Postives = 214/353 (60.62%), Query Frame = 1
Query:  277 FRTEVHIPMWPEHTQ--LGYADSFFLLGSCFSDNISAHLSRAK-LPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHV----SYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDDERGFFEAQIL 1314
            F T   I + P  TQ  L Y D   LLGSCFSDNI+A LS+A+  P + NP+HG+L++  A   ++ R ++   Y E  A L     T LW SLAHHS FS   ++ CL+G+N AL+KG+  L  A  +FVTLGTAWV+ H  SG    NCHKLP   F RR+  V E++ AL+  L+  L A    +++LTVSPVRH +DG +++SRS+AHL+A  HA ++         GV  G    +    SYFPS E+V DDLRDYR+Y  DM+HP+ +AV+YIW KL++A FS  A  TM  V +VV    HRPFNP S+ HQ F+R QL     LE   P L+L   +   E+ ++
Sbjct:   36 FETRTEIAVKPVETQRKLNYGDGVCLLGSCFSDNINARLSQAQWAPLACNPSHGILYNASALKKAVTRSLARENYAE--ADLSLNPQTGLWCSLAHHSRFSHADKQQCLDGLNTALSKGKESLHRARVVFVTLGTAWVYEHVASGDLAGNCHKLPQMQFKRRLQGVSEVSAALY-DLTAALYAAGVEQVVLTVSPVRHLKDGPIDSSRSRAHLLAAVHALLDAPPPPPTMNGVIGGTSSTLKPMCSYFPSLELVLDDLRDYRYYARDMLHPSDLAVDYIWGKLLQARFSTAAQETMSRVERVVAAAAHRPFNPTSEPHQKFVRSQLNIAAELENSVPALDLSRVKRVLESALV 385          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A0S8HMI4_9BACE (GSCFA domain-containing protein n=1 Tax=Bacteroides sp. SM23_62_1 TaxID=1703353 RepID=A0A0S8HMI4_9BACE)

HSP 1 Score: 270 bits (689), Expect = 5.040e-80
Identity = 134/344 (38.95%), Postives = 203/344 (59.01%), Query Frame = 1
Query:  277 FRTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDDERGFFEAQ 1308
            FRTEV IP+     ++ +  S   +GSCF++NI   +   K    +NP  G++++PL+A  +LD +I G  Y++ +        T  W S  HHS FS T  + CLE +N  +    G L     + +T GT+W++R  +SGK V+NCHKLP+  F R +++ D I Q     ++ +L+ NP  RI+ TVSPVRHW+DG V+N+ SK+ L+   H  +E+                 V YFP++EI  DDLRDYRFYE+DM+HPN    +YIW K  +A F D+ V+ M+++ K++   QH+PF+P S  ++ FL KQ+  + +L++KYP L+L  E+  FE Q
Sbjct:    4 FRTEVIIPL--SDYKIRHRSSILFIGSCFTENIGMKMQDYKFNVDINP-FGIVYNPLSAKQNLDALIEGKVYKKSD----LYHYTNRWISFDHHSRFSYTDPQLCLERINQRIDHASGKLPKTDFLIITFGTSWIYRRADSGKLVSNCHKLPSKFFRRELLTTDTIVQNYTILITELLKINPRLRIIFTVSPVRHWKDGPVQNTISKSTLVLAIHELVELFEG--------------VEYFPAYEIAIDDLRDYRFYEADMLHPNNQMTDYIWNKFCQAYFDDETVKIMKDLEKMINAMQHKPFHPDSLQYRDFLMKQMEYIQSLQKKYPYLDLSVEKNHFENQ 326          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A2G5L7L8_9FLAO (GSCFA domain-containing protein n=1 Tax=Maribacter sp. 4G9 TaxID=1889777 RepID=A0A2G5L7L8_9FLAO)

HSP 1 Score: 268 bits (684), Expect = 2.230e-79
Identity = 140/335 (41.79%), Postives = 201/335 (60.00%), Query Frame = 1
Query:  280 RTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDD 1284
            + +  IP++P   Q+ Y+    LLGSCFS+NI   L   K  T  NP  G+LF PLA    + + +    Y E++   +F    R W     HS  SS S+   L+ +N AL      L  AS I +TLGTAWV+ H+E    VANCHK+P   F ++++S  E+  +L +++ ++   NP  +I+ T+SPVRH +DG VEN RSKAHLIA  H   E+L S   G G G       +YFPS+EI+ D+LRDYRFYE DM+HPN +A++YIWEK +    S + V  M++V ++ +G  HRPF+P+SDAH+ F++    K+  ++ +YP LN DD
Sbjct:    2 KLQTQIPLFPSENQIKYSSRIMLLGSCFSENIGKKLEYYKFKTLQNP-FGILFHPLAIENLIQKALDQYKYSEED---IFQLDGR-WHCFDAHSELSSGSKEVLLKKLNDALMNIAKALKEASHIMITLGTAWVYEHKERNAIVANCHKVPQKEFRKKLLSQTEVKSSLIKTIESIKNINPKAQIIFTISPVRHLKDGFVENQRSKAHLIAAVH---EVLDSPSFGGGKGE------AYFPSYEIMMDELRDYRFYERDMVHPNRLAIDYIWEKFMNMWISKEEVVPMEKVSEIQKGLAHRPFDPESDAHKKFVKSLAQKITYIKERYPFLNFDD 322          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A653NWN0_9FLAO (GSCFA family protein n=1 Tax=Maribacter litoralis TaxID=2059726 RepID=A0A653NWN0_9FLAO)

HSP 1 Score: 265 bits (678), Expect = 1.560e-78
Identity = 139/329 (42.25%), Postives = 196/329 (59.57%), Query Frame = 1
Query:  295 IPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLD 1281
            IP+   + Q+ Y+    L+GSCFS+NI A LS  K     NP  G+LF PLA    + + ++   + E   G+VF +    W     HS  S+ S+   +  +N  L +    L  AS + +TLGTAWV+R+R+SG+ VANCHK+P  NF + ++SVDE+ ++L R ++ +   N +T ++ TVSPVRH +DG VEN RSKAHLI+  H  IE    S             VSYF S+EI+ D+LRDYRFY  DMIHPN  A+ YIWEK VE   +D     M++V +V +G QHRPFNP+S+AHQ FL     K+  + + YP ++ +
Sbjct:    7 IPLSKANDQIDYSSRLLLMGSCFSENIGAKLSHYKFQGLQNP-FGILFHPLAIEKLIQKALTQETFNE---GIVF-QANEQWHCFDAHSCISNPSKEQLVVDLNTGLDQTAEQLKVASHVIITLGTAWVYRNRDSGEIVANCHKVPQTNFTKELLSVDEVRESLKRMITLIQSVNSSTHVIFTVSPVRHLKDGFVENQRSKAHLISAIHQTIETSNFSP-----------RVSYFESYEIMMDELRDYRFYAKDMIHPNETAIAYIWEKFVEVWINDSITDDMKKVDEVQRGLQHRPFNPESEAHQKFLTSLSKKIAYIRKAYPFMDFE 319          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A5B7X5Y5_9FLAO (GSCFA domain-containing protein n=1 Tax=Antarcticibacterium flavum TaxID=2058175 RepID=A0A5B7X5Y5_9FLAO)

HSP 1 Score: 263 bits (673), Expect = 6.450e-78
Identity = 138/330 (41.82%), Postives = 197/330 (59.70%), Query Frame = 1
Query:  277 FRTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYP 1266
            FRT  H  + PE  ++ Y+ S FL+GSCF DNI   L +AKL +  NP  G+ + P A    L R++S  PY ++E   VF    R W     HS  S+ +R   LE +N  L   R  L +A+ + +TLGTA+ +R RE+G  VANCHK+P   F++ ++ V E+ + LH  L  +   NP+T IL T+SPVRH +DG +EN RSK+HL+A     +   + +              SYFPS+EI+ DDLRDYRFYE DM+HPN +A++YIW K +E   S DAV  M+E+  + QG  HRPFNP+S AH+ F  +   +++ L++ +P
Sbjct:    3 FRT--HFKIGPEEPKIDYSSSIFLIGSCFVDNIGRKLEQAKLKSLRNP-FGIFYHPAAIENFLSRVVSLKPYTKEE---VFHHNER-WHCFEAHSVLSNPNREKLLEDLNENLRVTRRFLENATHVIITLGTAFGYRARETGNFVANCHKVPQVQFEKELMPVGEVQERLHNCLGLLKTVNPSTAILFTISPVRHIKDGVIENQRSKSHLLAATGNIVNDKKDT--------------SYFPSYEIMMDDLRDYRFYEKDMLHPNAIAIDYIWNKFIEVWLSKDAVEVMKEITSLQQGLDHRPFNPESTAHKKFKEQLNERIEILKKSFP 311          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: UPI0015C92BAA (GSCFA domain-containing protein n=1 Tax=Winogradskyella wichelsiae TaxID=2697007 RepID=UPI0015C92BAA)

HSP 1 Score: 261 bits (666), Expect = 7.140e-77
Identity = 139/330 (42.12%), Postives = 194/330 (58.79%), Query Frame = 1
Query:  295 IPMWPE-HTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLD 1281
            IP+ P+ + Q+ Y     L GSCFS+NI    +  K  T +NP  G+LF PLA    + R I+   Y E++           W  L  HS  + TS+   L  +N+ + K   DL SA+ I +TLGT+WV+R  ES   VANCHKLP   F + ++SV++I+++L   +S V   NP    L TVSPVRH +DG VEN+ SK+HLI   H  +E  +              H+ YFPS+EI+ D+LRDYRFY +DMIHP+ VA++YIWEK      SDD ++T++ V  +     HRPFNPKS+AHQ FL+K  V ++NL+ +YP  N +
Sbjct:    7 IPLQPQQYNQIDYNSRLLLFGSCFSENIGDKFAYHKFQTVVNP-FGILFHPLAIENLITRAINKDYYTEEDLQFY----NEQWFCLDAHSKLNQTSKEELLTLLNSQIDKTYNDLLSATHIIITLGTSWVYRDIESDNVVANCHKLPQKKFLKELLSVEQISESLEGIISLVKNVNPEVSFLFTVSPVRHTKDGFVENTLSKSHLITAIHQVVEPRQ--------------HLYYFPSYEIMMDELRDYRFYNADMIHPSEVAIDYIWEKFKTVWLSDDTLKTLKIVTSLQAKKAHRPFNPKSEAHQVFLKKLQVDIENLQHEYPFFNFE 317          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: A0A1F3KJV5_9BACT (GSCFA domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3KJV5_9BACT)

HSP 1 Score: 260 bits (665), Expect = 1.280e-76
Identity = 126/344 (36.63%), Postives = 205/344 (59.59%), Query Frame = 1
Query:  271 NSFRTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDDERGFFE 1302
            N+FRT++ +   P   ++ YA S  L+GSCF++NI   + + K+P  +NP  G +++P++   S++ ++      ED+  L F  G  LWSS  HHS+FS     +CL  +N  +         A  + +T GT+WV++++++G+ V+NCHKLP+  F+R  ++VDEI  A    L+ +   NP  +I+ T+SP+RHW+DG+V+N  SKA L+   H   E   S+               YFP++EI+ DDLRDYRFYE DM+HP+ +AV+YIWEK  +  F    +   +E+ ++V+  +HRP NP+ +  + F +  L K+  +E+ +P LNL +E+ FF+
Sbjct:    2 NTFRTQIDLK--PSKNKISYASSGMLIGSCFTENIGRRMEKLKMPVDVNP-FGNIYNPISLKNSIEILLKNNKKSEDD--LFFSNG--LWSSFYHHSSFSDAIADNCLNAINTRIEASSTFFKKAEYLILTFGTSWVYQYKKTGEIVSNCHKLPSSEFERIRLNVDEIVVAYTSLLNELASVNPNLKIIFTLSPIRHWKDGAVDNMHSKATLLVAIHKLCENFSSA--------------HYFPAYEIMMDDLRDYRFYEEDMMHPSSLAVKYIWEKFSDVFFEKHTILLQKEIDEIVRAMRHRPINPELNPLKIFRQTMLQKISEMEKNHPFLNLKNEKNFFQ 324          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: UPI00047E63B6 (GSCFA domain-containing protein n=1 Tax=Maribacter antarcticus TaxID=505250 RepID=UPI00047E63B6)

HSP 1 Score: 260 bits (664), Expect = 1.530e-76
Identity = 134/333 (40.24%), Postives = 195/333 (58.56%), Query Frame = 1
Query:  280 RTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEM--LRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLL 1272
            + +  IP+     Q+ Y     LLGSCFS+NI A L   K  T  NP  G+LF P A    + R I    Y E+E   +F    R W     HS+ S  S+   +E +NA L      L  A+ I +TLGTAWV+R +E+GK VANCHK+P   FD+R+++V E+A +L R++S +   N   ++++T+SPVRH +DG VEN RSK+HLI   H  +E+   R  G              YFP++E++ D+LRDYRFYE DM+HPN +A++Y+WEK      SDD   TM+++ +V +G QHRPF+P S  +Q F      K+D++++ +P +
Sbjct:    2 KLQTQIPLTKAGNQIDYTSQLLLLGSCFSENIGAKLKYFKFQTLQNP-FGILFHPYAIGNLVTRAIEKEYYREEE---LFFLNER-WHCFDAHSSLSEVSKEKLVENLNAQLVHTEECLSKATHISITLGTAWVYRKKETGKTVANCHKVPQKEFDKRLLTVAEVATSLQRTVSQIQNINKKAQLIVTISPVRHLKDGFVENQRSKSHLITAVHQLLEVSCFRVKGF-------------YFPAYELIMDELRDYRFYERDMVHPNQLAIDYVWEKFAGVWISDDIKETMKKIEEVQKGAQHRPFDPNSVVYQKFHNSLQQKIDDIKKAFPFM 316          
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Match: UPI001C0694DC (GSCFA domain-containing protein n=1 Tax=Winogradskyella psychrotolerans TaxID=1344585 RepID=UPI001C0694DC)

HSP 1 Score: 259 bits (661), Expect = 3.680e-76
Identity = 140/325 (43.08%), Postives = 192/325 (59.08%), Query Frame = 1
Query:  295 IPMWPE-HTQLGYADSFFLLGSCFSDNISAHLSRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRLWSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFRHRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRILLTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGHVSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVRTMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYP 1266
            IP+ P+ H QL Y     L GSCFS+NI    +  K  T++NP  G+LF PLA    + + I+   Y +++  L F      W  L  HS  S+TS  + LE +N  + K   DL +AS I +TLGT+WV+RH  S K VANCHK+P   F + ++SV +I ++L    S V   NP    L TVSPVRH +DG +EN+RSK+HL+A  H  IE                    YFPS+EI+ D+LRDYRFY SDM+HPN VA+ YIWEK      ++DA++ ++ V  +     HRPFNP SDAHQAFL K  ++++NL +++P
Sbjct:    7 IPLKPQQHHQLDYNSKIMLFGSCFSENIGETFNYYKFQTTVNP-FGILFHPLAIENLITKAINKDYYSKED--LEF--HNEQWCCLEVHSKLSTTSSAALLEVLNRQIEKAHNDLLNASHIIITLGTSWVYRHIASDKIVANCHKIPQKQFLKELLSVAQITESLEAIFSLVKSVNPNITFLFTVSPVRHIKDGFIENTRSKSHLLAAIHQVIEPRAQR--------------YYFPSYEIMMDELRDYRFYNSDMLHPNEVAINYIWEKFKTVWLTEDALKVLETVAAIQAKKAHRPFNPNSDAHQAFLSKLQLEIENLHKQFP 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.12.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE6_ECTSI6.860e-20481.02GSCFA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YTW4_9STRA3.720e-8745.33GSCFA family-domain-containing protein n=1 Tax=Tri... [more]
A0A0S8HMI4_9BACE5.040e-8038.95GSCFA domain-containing protein n=1 Tax=Bacteroide... [more]
A0A2G5L7L8_9FLAO2.230e-7941.79GSCFA domain-containing protein n=1 Tax=Maribacter... [more]
A0A653NWN0_9FLAO1.560e-7842.25GSCFA family protein n=1 Tax=Maribacter litoralis ... [more]
A0A5B7X5Y5_9FLAO6.450e-7841.82GSCFA domain-containing protein n=1 Tax=Antarctici... [more]
UPI0015C92BAA7.140e-7742.12GSCFA domain-containing protein n=1 Tax=Winogradsk... [more]
A0A1F3KJV5_9BACT1.280e-7636.63GSCFA domain-containing protein n=2 Tax=Bacteroide... [more]
UPI00047E63B61.530e-7640.24GSCFA domain-containing protein n=1 Tax=Maribacter... [more]
UPI001C0694DC3.680e-7643.08GSCFA domain-containing protein n=1 Tax=Winogradsk... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:41039..45638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTE6
PFAMsGSCFA
Model size2423
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons6
Evalue8.07e-211
EggNOG OGs2EGXU@1|root,2SMRS@2759|Eukaryota
Ec32 ortholog descriptionSGNH hydrolase-type esterase domain
Ec32 orthologEc-02_006060.1
DescriptionGSCFA family
Cds size1260
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.12.3prot_P-littoralis_Contig86.12.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig86 42208..45551 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791729.8218868-UTR-P-littoralis_Contig86:41038..413831680791729.8218868-UTR-P-littoralis_Contig86:41038..41383Pylaiella littoralis U1_48UTRP-littoralis_Contig86 41039..41383 -
1680791729.8403308-UTR-P-littoralis_Contig86:41476..422071680791729.8403308-UTR-P-littoralis_Contig86:41476..42207Pylaiella littoralis U1_48UTRP-littoralis_Contig86 41477..42207 -
1680791729.9181163-UTR-P-littoralis_Contig86:45551..456381680791729.9181163-UTR-P-littoralis_Contig86:45551..45638Pylaiella littoralis U1_48UTRP-littoralis_Contig86 45552..45638 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791729.853631-CDS-P-littoralis_Contig86:42207..424051680791729.853631-CDS-P-littoralis_Contig86:42207..42405Pylaiella littoralis U1_48CDSP-littoralis_Contig86 42208..42405 -
1680791729.8646913-CDS-P-littoralis_Contig86:43036..434891680791729.8646913-CDS-P-littoralis_Contig86:43036..43489Pylaiella littoralis U1_48CDSP-littoralis_Contig86 43037..43489 -
1680791729.8778167-CDS-P-littoralis_Contig86:43854..439691680791729.8778167-CDS-P-littoralis_Contig86:43854..43969Pylaiella littoralis U1_48CDSP-littoralis_Contig86 43855..43969 -
1680791729.8905425-CDS-P-littoralis_Contig86:44425..445791680791729.8905425-CDS-P-littoralis_Contig86:44425..44579Pylaiella littoralis U1_48CDSP-littoralis_Contig86 44426..44579 -
1680791729.9006953-CDS-P-littoralis_Contig86:45211..455511680791729.9006953-CDS-P-littoralis_Contig86:45211..45551Pylaiella littoralis U1_48CDSP-littoralis_Contig86 45212..45551 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig86.12.3

>prot_P-littoralis_Contig86.12.3 ID=prot_P-littoralis_Contig86.12.3|Name=mRNA_P-littoralis_Contig86.12.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=420bp
MAMPPERYRYARVLFASITLFKVAHAFTGALLLQQHTRTQKNSASTSPAT
QQAGRWTMMSSNSFRTEVHIPMWPEHTQLGYADSFFLLGSCFSDNISAHL
SRAKLPTSLNPAHGLLFSPLAAAASLDRMISGVPYEEDEAGLVFCEGTRL
WSSLAHHSTFSSTSRRSCLEGMNAALAKGRGDLFSASCIFVTLGTAWVFR
HRESGKDVANCHKLPAYNFDRRIVSVDEIAQALHRSLSNVLRANPTTRIL
LTVSPVRHWRDGSVENSRSKAHLIAGAHAAIEMLRSSGIGEGVGAGGGGH
VSYFPSFEIVNDDLRDYRFYESDMIHPNGVAVEYIWEKLVEAMFSDDAVR
TMQEVHKVVQGTQHRPFNPKSDAHQAFLRKQLVKVDNLERKYPLLNLDDE
RGFFEAQILETKTTAVSGL*
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mRNA from alignment at P-littoralis_Contig86:41039..45638-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig86.12.3 ID=mRNA_P-littoralis_Contig86.12.3|Name=mRNA_P-littoralis_Contig86.12.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4600bp|location=Sequence derived from alignment at P-littoralis_Contig86:41039..45638- (Pylaiella littoralis U1_48)
ATATCATCGTTGCTACCTGACACATCTCATTGCTTTGCTCCTGGCCGTGC TACGAAAACGATCCTGGGCGCCACAGTGTGTTGCTTGATGGCAATGCCGC CCGAGAGATACCGGTATGCCCGCGTGCTGTTCGCGAGCATCACGCTCTTC AAAGTTGCACATGCATTCACCGGCGCACTACTGCTGCAACAGCACACAAG AACACAAAAAAACTCCGCATCAACAAGCCCAGCAACACAACAGGCAGGAC GGTGGACCATGATGAGCAGTAACTCGTTTAGAACCGAGGTCCATATCCCT ATGTGGCCGGAGCATACTCAGCTGGGCTATGCTGATTCTTTCTTTCTGCT GGGATCGTGCTTTAGTGACAACATCAGCGCACATCTATCGAGAGCAAAGC TGCCCACGTCGTTGAACCCGGCGCACGGTGGGTTGTTACTGTAGCTTGGA TCCTTGTACTGCTGATGTAGACCCCTACAAGCAGGTACGCGTGGGTTTAG GGTGCTGGGTGTTGGCTGCCGTGTCAAGCTGAAGGCTGGAGGTAGACTTG GGTGTGAGGAGGCTACCTGGCCTCAGGCACAGCGGGAATCCCGTTCAGAA TGGGTCACGAATTTGGCCATATGATTTCCGCACGCCCACATACTTATACA GCCATCTCCCACCTTTGTATTTCCGATGTGCGTCGAAGTAGCTGAGCATT CGATGCCAAGGTACAGCAGTAGTAGTGCACCACCTTCTGATAACTGGGCA CCGGTTGGCATAACACGCATCTGAGGGGGGAAAGTGGCTGGAATCCAAAA GGAGCATACATGTACAATACGTTTGTGGGTACGTGTTGATGACCATATAA ATGACACGGCACATGACACCAAATGTGGGATACCAGCCTCGGCCAAAAGT TACTGGGTGTCCCGTAATGTACCAGTGGATTCGGTGCGGAGGCGGCGATA GCCGTCAAGTGGGGGACAACCTTTACGACCAACGTAACTTCTGCTGTGAT TGTCGTGACACTGCCTGCTGCCGTTACATACGGCGTTGATGGTCGTCATA CATATGCAGGGCTCCTGTTCAGCCCGCTTGCTGCAGCAGCTTCCTTGGAC AGGATGATCTCCGGTGTGCCATATGAGGAGGATGAAGCAGGGCTGGTGTT CTGCGAGGGCACGAGGCTGTGGTCTAGCCTCGCCCATCATAGCACCTTCT CGTCGACCTCTAGGTGATTTGTATATACGAGAGAAGGGGCGGATGGGGCG TGGACCTTCCCATGTCTGTGTCCATCCGAAGTATTACTCTCTCTTGCACG TCCATATGTTTCTATTGACTCCGTGCCACGTATCATACTGCTGTAGGTGC GATTGCACAGCTGTGTAAAAGTTGCGCGCGAATATAGGCGCCATTTGTCC TCGAGAGCAGAGTTTGAGTTCGCATGACGGTAGCACGAATATGATTGAGA GATAACTCAGCTGTCCCGGATATTACGTCTGCGTATGTTGATGGATGTTA CGAGGAGGTTGGCGTAGTGCTGTAGGTTCCTTGCACGACGCGAATAGCAG TGGCTGTCGGAGGTTCGTCGATCTATCCGCGTTTCCACCATGCCACAACG CCGTCGCTTGATGCCTTTGAATTGGCCGTGGTTCCCCACTCGTTTACCCG TAACCTTGCCTATGTGAAGACGGAGCTGTCTGGAGGGAATGAACGCGGCC CTGGCGAAGGGTCGAGGGGACCTCTTTTCCGCCAGCTGCATCTTCGTCAC GCTTGGCACGGCGTGGGTTTTCCGGCATCGCGAGGTGTGTACCGTATACC GGCATGCTCGTGCACGGCAATTCATAGTTTGGCGTTGCCAATAGCGGGGA GTCTTGCTGCGATATGGCGTACACCTGATTTGATTTACCCACCTGCTACA AATACAAGTGCAGAGAGAATGACTGCCGGGGACCATGCCGTACAGTCTTC GGAAGAACGAAATCTATCCGCGTTCAGCGTTACCAAGCATCATGCATTAA CACAAAACGACTGGCTAATTTTATAGTCAGGCTATAACCTGTCTGCCGTA CACCAGGATATGTGCAGTGCGGCCACTCCCTCGTCCGCCCTTTCGCCCTT CCTTCACAGCCCACCTTCATCCTGTCCTGCGTGTCCCCGAATGAAACAGT CTGGCAAAGACGTGGCCAACTGCCACAAACTCCCGGCGTACAACTTCGAC CGCCGGATAGTGTCCGTAGACGAGATCGCTCAGGCGCTTCACCGCTCCCT GTCCAACGTGCTTCGTGCTAACCCCACCACACGGATACTGCTCACGGTTA GCCCGGTGCGACACTGGCGGGACGGTTCCGTCGAAAACAGCCGGAGCAAG GCGCACCTGATAGCCGGGGCCCACGCGGCGATAGAAATGCTGCGGTCGTC GGGGATAGGGGAAGGGGTCGGGGCGGGGGGGGGCGGGCACGTGTCGTACT TTCCGAGCTTTGAGATAGTTAATGACGACCTGAGAGACTATCGGTTCTAC GAGTCGGACATGATCCACCCGAACGGTGTCGCGGTGGAATACATCTGGGA AAAGCTAGTCGAGGCCATGTTTTCGGACGATGCCGTCCGGACCATGCAAG AGGTGAGTGAGGTAACGCACGCGCAGCTCTATGCGTGGGCTTCAGAGAGG CCTCTTCGTGTCCATGTCGCGTCCTCTCTGTATGGCATCGGGCGATTTTT GTGTTGATAAGTCCAAGCATTTCGACGGCTTTTAACTATTGTATAAGTCA TATCCTTTTTGGAGTTGGTCAGGGCACCCAACTCTCTGCACGTTTGTGTG TGTGCCAGCACGCGGGAACAGTTGCTCTGTGTACTTGGACACGCAACTCC ACCGCGAGGTAAGTAAACATCACCAGTGGTGAGATCCGGCCGACACAAAG GCTCTGATCGGTTCAGGTTTTTGCCTTCGTCGCGTGGAATAGAGGCCCAG ATATGTCTGTGACTAACAGTCGCGCAGTGTTGTCCTACTCTACACGTTGA TTGGCCGCGACGGCCACAGCAGCGTTACAAGAAGATGAGAGCGCGCCCCG TGTACGTACCTCGTCCCTTCTGAATCTACCCAAAATTTGTGCGTTTAGTG CCCATACCGGCGGGCTAGCTTGCTGGTCTTCACCCACCCCCGGGCGACAG TACTCGTGTGTGCATATACTGGGTATACAACAACAAAATAACAATATTCG TTTCTGAACGACGGCTCCCAACTCTTGTTGCAGGTCCACAAGGTGGTCCA GGGTACGCAGCACCGGCCGTTCAACCCCAAAAGCGACGCGCACCAGGCGT TCCTGAGAAAGCAGCTTGTGAAGGTGGACAACCTTGAGCGCAAGTACCCC CTGCTGAACCTCGACGACGAGCGAGGTTTTTTCGAGGCTCAAATTCTTGA GACCAAGACCACGGCCGTTTCGGGTCTTTGATTTGGACTTGGCCCAGCGC CGGTGTATTTCATTTTGTAGGTCACGTCGTCGTCACAAGCTGCCTGTGTT TCCTACCGAATTGTGATCAACCAACGACACGAGAAGTTCTTCGGTATTGC GTTTTTGCAGTTCGCTGTCGGTAAGTGTCTGTTGTCTACCGACGAACACA GCAGTGAGGGTTTTACTTTGACGTGTGAAAATAGTACTTCAGTATAGAGT TTCTTTTTTTGTGGGCTAGTCGGGGTTGTGACGTATATTGAGTGGACGGC TACACTTTCCTGACTGATGCCTGATTTTCAGGGTTGGGGTTATTCACACA CAGTCGGTATCACTAGTACAATGCGACACTTTATTTGTCATATCATAGGA CATTCGCAACAAATGGAAGGTTGATGGCGTCACTCGCAATAGGGAACACT AGACCAATAGAAGTAAAGCAATTCCAGCGCAGATGTATGAGTAACTCAGT ATGGGGACAGCCACAGCCTCAACTGAAGCCTACCCCCCACCTCTTCTTTC CCCAATGAGAGAGAAGAGAAGGAGAAGAAGGAGGAGAGGCGGACCTGTTG ATTGTTGTAAGTAGACGTGGAAACTTTTCACCAAATATTTTAGACGAGAT GTGTGAGTCGTGTGATGGAAATGCAGTTTGAGACACGGTATGATACGAGA TCCAAATGTGAAACGCTTGACAAAACCAAATTAAGTTGCTTGTATATATC GCTGGAAGATCCGCTTGTGGCTGTAGACCACGCTTGATTGGTTTTTTGCA TAGGCACGCGTCTTGGCAAAAGTTCGTGGACGTTCCAAAGGTGGACCGGT TCTAGATGGTAGGTTGTCTAGTTGGGATTGCAGTGGCGGTAACGACAAAG CGTATGCGGCTTGCGGCTACAGCAGTCTTCAACTTTTGCGTATACTCTTA AATATACTGTATGTGTATGACTTATCATTCCACCATAGAATCTCATCTTT CTAGGGAATACAGCAGTAAATGCAGACAAGATACGACAGATTGAGAGATC CGAGTTGGCCACAGCACTCCCTCATGGTCTCCAAAACTCGACAGAGAATT CGGGAGTGAACTGCGACCATGATCTGATTCGTGGGGTCGGGGAAACTGAT CCTTGCCCTGTGTGAGAATCACTCGGCCATCGCTTAATACTCCTTTTCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig86:41039..45638-

>mRNA_P-littoralis_Contig86.12.3 ID=mRNA_P-littoralis_Contig86.12.3|Name=mRNA_P-littoralis_Contig86.12.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1260bp|location=Sequence derived from alignment at P-littoralis_Contig86:41039..45638- (Pylaiella littoralis U1_48)
ATGGCAATGCCGCCCGAGAGATACCGGTATGCCCGCGTGCTGTTCGCGAG
CATCACGCTCTTCAAAGTTGCACATGCATTCACCGGCGCACTACTGCTGC
AACAGCACACAAGAACACAAAAAAACTCCGCATCAACAAGCCCAGCAACA
CAACAGGCAGGACGGTGGACCATGATGAGCAGTAACTCGTTTAGAACCGA
GGTCCATATCCCTATGTGGCCGGAGCATACTCAGCTGGGCTATGCTGATT
CTTTCTTTCTGCTGGGATCGTGCTTTAGTGACAACATCAGCGCACATCTA
TCGAGAGCAAAGCTGCCCACGTCGTTGAACCCGGCGCACGGGCTCCTGTT
CAGCCCGCTTGCTGCAGCAGCTTCCTTGGACAGGATGATCTCCGGTGTGC
CATATGAGGAGGATGAAGCAGGGCTGGTGTTCTGCGAGGGCACGAGGCTG
TGGTCTAGCCTCGCCCATCATAGCACCTTCTCGTCGACCTCTAGACGGAG
CTGTCTGGAGGGAATGAACGCGGCCCTGGCGAAGGGTCGAGGGGACCTCT
TTTCCGCCAGCTGCATCTTCGTCACGCTTGGCACGGCGTGGGTTTTCCGG
CATCGCGAGTCTGGCAAAGACGTGGCCAACTGCCACAAACTCCCGGCGTA
CAACTTCGACCGCCGGATAGTGTCCGTAGACGAGATCGCTCAGGCGCTTC
ACCGCTCCCTGTCCAACGTGCTTCGTGCTAACCCCACCACACGGATACTG
CTCACGGTTAGCCCGGTGCGACACTGGCGGGACGGTTCCGTCGAAAACAG
CCGGAGCAAGGCGCACCTGATAGCCGGGGCCCACGCGGCGATAGAAATGC
TGCGGTCGTCGGGGATAGGGGAAGGGGTCGGGGCGGGGGGGGGCGGGCAC
GTGTCGTACTTTCCGAGCTTTGAGATAGTTAATGACGACCTGAGAGACTA
TCGGTTCTACGAGTCGGACATGATCCACCCGAACGGTGTCGCGGTGGAAT
ACATCTGGGAAAAGCTAGTCGAGGCCATGTTTTCGGACGATGCCGTCCGG
ACCATGCAAGAGGTCCACAAGGTGGTCCAGGGTACGCAGCACCGGCCGTT
CAACCCCAAAAGCGACGCGCACCAGGCGTTCCTGAGAAAGCAGCTTGTGA
AGGTGGACAACCTTGAGCGCAAGTACCCCCTGCTGAACCTCGACGACGAG
CGAGGTTTTTTCGAGGCTCAAATTCTTGAGACCAAGACCACGGCCGTTTC
GGGTCTTTGA
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