mRNA_P-littoralis_Contig859.9.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: D8LLZ8_ECTSI (4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ8_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 9.770e-156 Identity = 236/287 (82.23%), Postives = 252/287 (87.80%), Query Frame = 2
Query: 38 PLSCGSPSSXXXXXXXXXVSVSTARAEGWRKAVLPFLPPERCRSASPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEKVDGVEIHTKGDLARFRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATMGALMDN 898
PL CGS S + RAE WR+AVLPFLPP+ CR+ASPAESL RGEWFKLICGASFEDLPA+RDL+LVYTLAGADCIDVAAEEAVIEAARDGV+AA+GVAEAIGKPM PWLMMSVNDDEEDPHFRKAAFDP LCP DCPRPCETVCPADAVVFPDSAPPPA RAAMV EL ASAGGGVLGPRCYGCGRCI VCPPGIIRAEKYKRSP VVRELLEKVDGVEIHTKG+LA FR+LWE C+A+AASR F+VVAVSFPDLG+DTGLAVATMGA+MD+
Sbjct: 61 PLRCGS-------------SAPSDRAEEWREAVLPFLPPDHCRTASPAESLGRGEWFKLICGASFEDLPAIRDLSLVYTLAGADCIDVAAEEAVIEAARDGVIAALGVAEAIGKPMR-MPWLMMSVNDDEEDPHFRKAAFDPNLCPADCPRPCETVCPADAVVFPDSAPPPAHRAAMVGELLRASAGGGVLGPRCYGCGRCINVCPPGIIRAEKYKRSPGVVRELLEKVDGVEIHTKGNLASFRELWEECVAAAASRPQFRVVAVSFPDLGDDTGLAVATMGAVMDS 333
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: A0A6H5JLS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS5_9PHAE) HSP 1 Score: 381 bits (979), Expect = 3.630e-127 Identity = 194/224 (86.61%), Postives = 207/224 (92.41%), Query Frame = 2
Query: 233 EDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEKVDGVEIHTK--GDLARFRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATMGALMDN 898
+DLPA+RDL+LVYTLAGADCIDVAAEEAVIEAARDGV+AA+GVAE IGKPM PWLMMSVNDDEEDPHFRKAAFDP LCP DCPRPCETVCPADAVVFPDSAPPPAQRAAMV EL ASAGGGVLGPRCYGCGRCI VCPPGIIRAEKYKRSP VVRELLEKVDGVEIHTK G+LA FR+LWE C+A+AASR F+VVAVSFPDLG+DTGLAVATMGA+MD+
Sbjct: 11 QDLPAIRDLSLVYTLAGADCIDVAAEEAVIEAARDGVIAALGVAETIGKPMR-MPWLMMSVNDDEEDPHFRKAAFDPNLCPADCPRPCETVCPADAVVFPDSAPPPAQRAAMVGELLRASAGGGVLGPRCYGCGRCITVCPPGIIRAEKYKRSPGVVRELLEKVDGVEIHTKASGNLASFRELWEECVAAAASRPQFRVVAVSFPDLGDDTGLAVATMGAVMDS 233
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: A0A835Z7A0_9STRA (4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A0_9STRA) HSP 1 Score: 233 bits (593), Expect = 2.440e-68 Identity = 125/231 (54.11%), Postives = 152/231 (65.80%), Query Frame = 2
Query: 167 SASPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEKVDGVEIHTKGDLARFRDLWEGCIASAASRSGFKVVAVSFPDLGEDT 859
S P +SL RGE+FKLICGASFED VR+LALVYTLAGADC+D AAE AV+ AA++G+ A+ +A+ G L PW M+SVNDD DPHFRKAAFD CP DCPRPCE VCPA A+ FPD E+ G CYGCGRCI VCPPGII A Y R+P+ V LL+ V+ +E+HTKGD+ FRDLW A + + V++SFPD+GE+T
Sbjct: 18 SVPPDQSLARGEFFKLICGASFEDASDVRNLALVYTLAGADCVDCAAERAVVAAAQEGIDTALAIAKDCGAS-LRRPWTMISVNDDARDPHFRKAAFDARRCPADCPRPCERVCPAQAIAFPD-------------EVRG-----------CYGCGRCIPVCPPGIIDAVTYLRTPADVLPLLDMVEAIEVHTKGDVQAFRDLWAHIGPEADTT--LRAVSISFPDMGEET 221
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: UPI001882D1CD (4Fe-4S ferredoxin n=3 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001882D1CD) HSP 1 Score: 207 bits (528), Expect = 4.720e-59 Identity = 119/236 (50.42%), Postives = 149/236 (63.14%), Query Frame = 2
Query: 176 PAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAV---GVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSA-------PPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELL--EKVDGVEIHTK-GDLARFRDLWEGCIASAASRSGFKVVAVSFPD 844
P SLR G WFKLICGASF+ LPAVR+L+L YTLAGADCIDVAA+ AVI AA+ + A G A G PWLM+S+ND E DPHFRKA F+P LCP DCPRPCE +CPA A+VF S+ P +RA D+ +A GV+ RCYGCGRC+ +CP +I Y +P+ + EL+ +D +EIHTK G A F+ LW+ IA R K++A+S PD
Sbjct: 7 PLHSLREGHWFKLICGASFQHLPAVRNLSLAYTLAGADCIDVAADPAVIAAAKQALQVAAQLQGTARLRGMGYSHRPWLMVSLNDGE-DPHFRKAEFNPDLCPADCPRPCERICPAQAIVFQTSSVLMSGAGEPENRRAGERDKSLHPTASSGVIDQRCYGCGRCVPICPSQLIHTRSYVSAPATLAELVLPSGIDALEIHTKVGHFADFQRLWQA-IAPWVDR--LKLLAISCPD 238
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: UPI0018ADD872 (uncharacterized protein LOC120263025 isoform X1 n=4 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADD872) HSP 1 Score: 206 bits (525), Expect = 7.450e-58 Identity = 123/245 (50.20%), Postives = 154/245 (62.86%), Query Frame = 2
Query: 170 ASPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAG-----GGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEK--VDGVEIHTKGDLAR-FRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATM 880
A+P ESLRRG+W KLICGASFED+ VR+L+LVYTLAG DCID AA+ +V+ A DG+ AA+ +A + PW+M+SVNDD D HFRKA FDP CP DC RPCE VCPA+A++ +R + DE+ S GGV+ RCYGCGRC+ VCP IRA Y R + LL++ VD +EIHT+G F++LW G +S K+VAVS PD GE T VATM
Sbjct: 41 AAPIESLRRGDWVKLICGASFEDMADVRNLSLVYTLAGVDCIDCAADASVVNAVNDGIDAALEIAS------VRRPWVMISVNDDRNDLHFRKAEFDPEDCPPDCSRPCEMVCPANAILL--------KRMSEGDEIQDGSHARGKLQGGVITERCYGCGRCLPVCPFDRIRAITYIRDLATTSALLKRNDVDAIEIHTRGRTTELFKELWTGLSSSIGH---LKLVAVSLPDNGEST---VATM 265
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: UPI0009E5040C (uncharacterized protein LOC110017905 isoform X1 n=4 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5040C) HSP 1 Score: 207 bits (527), Expect = 7.680e-58 Identity = 117/249 (46.99%), Postives = 155/249 (62.25%), Query Frame = 2
Query: 176 PAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAG-----GGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEK--VDGVEIHTKG-DLARFRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATMGALMDN 898
P +SLRRGEW KLICGASFED +R+L+LVYTLAG DCID AA+E+V+ A DG+ AA+ + ++ PW+M+SVNDD+ED HFRKA FDP CP DC RPCE VCPA+A++ ++++ G+S GGV+ RCYGCGRC VCP IRA+ Y R + ELL++ VD +EIHT G + F +LW+ S K+VAVS PD+G T + M +M++
Sbjct: 51 PIDSLRRGEWVKLICGASFEDAADIRNLSLVYTLAGVDCIDCAADESVVNAVNDGINAAMNIGS------IERPWVMISVNDDKEDLHFRKAEFDPENCPLDCSRPCEKVCPANAILL--------KKSSTGQHSLGSSDASDRLQGGVVTERCYGCGRCFPVCPFDKIRAKTYIRETAATSELLKRNDVDAIEIHTTGRHIHLFNELWD---TLGTSIKHVKLVAVSMPDIGNSTFSTMQDMHTIMES 282
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: UPI0019F07F45 (4Fe-4S ferredoxin n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019F07F45) HSP 1 Score: 205 bits (522), Expect = 1.710e-57 Identity = 117/229 (51.09%), Postives = 150/229 (65.50%), Query Frame = 2
Query: 176 PAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAE---AIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEK--VDGVEIHTK-GDLARFRDLWEGCIASAASRSGFKVVAVSFPD 844
P SL++G WFKLICGASF+ LPA+R+LAL Y+LAGADCIDVAA+ AVI AAR+G+ A +A+ A G P PWLM+S+ND E DPHFRKA FD T CPT+CPRPCET+CPA A+ F + Q+ GV RCYGCGRC+ VCP +I Y +P+ + L+E+ +D VEIHT G+LA F+ LW+ IA +R K++A+S PD
Sbjct: 7 PLHSLKKGNWFKLICGASFQHLPAIRNLALAYSLAGADCIDVAADPAVIVAAREGIGTATALADGAMARGLPWQGKPWLMVSLNDGE-DPHFRKAQFDVTQCPTECPRPCETICPAQAISFTE------QKRGFT----------GVSEQRCYGCGRCLPVCPSQLIFTRSYVSTPTAIAPLIEEMNIDAVEIHTHAGNLANFQRLWQA-IAPYINR--LKLLAISCPD 215
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: A0A2G9HNW1_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HNW1_9LAMI) HSP 1 Score: 205 bits (522), Expect = 2.100e-57 Identity = 125/243 (51.44%), Postives = 152/243 (62.55%), Query Frame = 2
Query: 173 SPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEK--VDGVEIHTKGDLAR-FRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATMGALM 892
SP ESL++G W KLICGASFED+ +R+L+LVYTLAG DCID AAE +V+ A DG+ AA G+ + PW+M+SVND+E D HFRKA FDP CP DC RPCE VCPADA+ + A GAS GG VL RCYGCGRC+ VCP IRA Y R + ELL+ +D +EIHT G A FR+LW G S G ++VAVS PD+GE T A+ +M A M
Sbjct: 45 SPLESLQKGNWVKLICGASFEDVTDIRNLSLVYTLAGVDCIDCAAEASVVNAVHDGIEAARGIFP------IRRPWVMISVNDNE-DLHFRKAEFDPNDCPIDCSRPCENVCPADAISYFGKA--------------GASKGG-VLAERCYGCGRCLPVCPYDKIRAITYIRDVAATAELLKHNDIDALEIHTSGRQAESFRELWNGL---GDSIDGLRLVAVSLPDIGELTVPAMNSMYATM 262
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: A0A059DBZ4_EUCGR (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059DBZ4_EUCGR) HSP 1 Score: 205 bits (522), Expect = 3.380e-57 Identity = 122/245 (49.80%), Postives = 152/245 (62.04%), Query Frame = 2
Query: 170 ASPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELL--EKVDGVEIHTKG-DLARFRDLWEGCIASAASRSGFKVVAVSFPDLGEDTGLAVATMGALMD 895
+SP +SLR G W KLICGASFED+ +R+L+LVYTLAG DCID AA+E+V+ A G+ AA + E +G+P W+M+SVNDDE D HFRKA FDP CP DC RPCE VCPA+A+ + DE GGVL RCYGCGRCI VCP IR Y R + ELL E +D +EIHT G + FR LWEG S ++VAVSFPD+G+ T + TM ++M+
Sbjct: 45 SSPVDSLRNGSWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADESVVNAVNQGIEAAREIVE-VGRP-----WVMISVNDDE-DLHFRKAEFDPADCPQDCSRPCEIVCPANAISLEKEKSSAGRLWNTSDE---GKDQGGVLTERCYGCGRCIPVCPYDKIRVHTYVRDAAATSELLRREDIDALEIHTSGRQILHFRSLWEGL---GDSIHHLRLVAVSFPDVGDSTISTMKTMYSIME 276
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Match: A0A3M1PP14_9CYAN (4Fe-4S ferredoxin n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1PP14_9CYAN) HSP 1 Score: 206 bits (524), Expect = 4.730e-57 Identity = 117/225 (52.00%), Postives = 147/225 (65.33%), Query Frame = 2
Query: 173 SPAESLRRGEWFKLICGASFEDLPAVRDLALVYTLAGADCIDVAAEEAVIEAARDGVLAAVGVAEAIGKPMLDAPWLMMSVNDDEEDPHFRKAAFDPTLCPTDCPRPCETVCPADAVVFPDSAPPPAQRAAMVDELFGASAGGGVLGPRCYGCGRCIAVCPPGIIRAEKYKRSPSVVRELLEKVDGVEIHTK-GDLARFRDLWEGCIASAASRSGFKVVAVSFPD 844
+P +SLR G WFKLICGASF+ LPA+R+L L Y LAGADC+DVAA+ AVI AA++G+ AA+ +G L PWLM+S+ND E DPHFRKA FDP CP DCPRPCET+CPA A+ F SA GV+ RCYGCGRC+ +CP I + +P ++ LL +VD VEIHT+ G L+ FR LW+ IA AASR ++VA+S PD
Sbjct: 32 TPLQSLREGRWFKLICGASFQHLPAIRNLTLAYALAGADCVDVAADPAVIHAAQEGLQAAL----RLGCDRL--PWLMVSLNDGE-DPHFRKAVFDPARCPADCPRPCETICPAQAITFDRSA----------------DGHSGVIASRCYGCGRCLPLCPIQQITTQATAITPGMIPALLAEVDAVEIHTQVGRLSEFRRLWQA-IAPAASR--LRLVAISCPD 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig859.9.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig859.9.4 >prot_P-littoralis_Contig859.9.4 ID=prot_P-littoralis_Contig859.9.4|Name=mRNA_P-littoralis_Contig859.9.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp MMPLSCGSPSSSSSSSSSSVVSVSTARAEGWRKAVLPFLPPERCRSASPAback to top mRNA from alignment at P-littoralis_Contig859:28229..37159- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig859.9.4 ID=mRNA_P-littoralis_Contig859.9.4|Name=mRNA_P-littoralis_Contig859.9.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=8931bp|location=Sequence derived from alignment at P-littoralis_Contig859:28229..37159- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig859:28229..37159- >mRNA_P-littoralis_Contig859.9.4 ID=mRNA_P-littoralis_Contig859.9.4|Name=mRNA_P-littoralis_Contig859.9.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1020bp|location=Sequence derived from alignment at P-littoralis_Contig859:28229..37159- (Pylaiella littoralis U1_48)back to top |