mRNA_P-littoralis_Contig858.8.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: D7G8A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A1_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 3.450e-141 Identity = 206/225 (91.56%), Postives = 219/225 (97.33%), Query Frame = 3
Query: 27 MASQKSVGIFLQEAFGSFALLLMVFPFNSFLGDTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTGEGMAWEFGSTLALILIVYAAATQIGLPGQRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDSSVTMDAQWFLVYWVAPCAAAVAGTLLWKSLEPKPKAKTD 701
M+SQ+++GIFLQE FGSFALL+MVFPFNSFLGDTWS+WIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWND+SSL++R+V QMVGGFYAFPIMAKLLPSYAT+SMGGPTLAAGASTG+GMAWEFGST ALILIVY AATQIGLPGQRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYD SVTMD QWFLVYWVAPCAAAVAGTLLWK+LEPKPKAKTD
Sbjct: 1 MSSQRTLGIFLQETFGSFALLMMVFPFNSFLGDTWSAWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDQSSLVVRIVGQMVGGFYAFPIMAKLLPSYATSSMGGPTLAAGASTGQGMAWEFGSTFALILIVYVAATQIGLPGQRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDKSVTMDQQWFLVYWVAPCAAAVAGTLLWKALEPKPKAKTD 225
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A835Z8P0_9STRA (Aquaporin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8P0_9STRA) HSP 1 Score: 250 bits (639), Expect = 2.070e-74 Identity = 123/217 (56.68%), Postives = 156/217 (71.89%), Query Frame = 3
Query: 33 SQKSVGIFLQEAFGSFALLLMVFPFNSFLGDTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTGEGMAWEFGSTLALILIVYAAATQIGLPGQRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDSSVTMDAQWFLVYWVAPCAAAVAGTLLWKSLEPK 683
S K VG+FLQE F SF +L+++FPF SFLGDTW W HFF VM+ D+ GG+QVNPA+S+ T YGWN +S +R+ Q+VGG AFP++A++LP Y MGGP L S +G AWEFG T AL+++VY AATQIGLP QRP+IA GIR LI+ GGKTGPAMNPMIA +WA Y + +++ FLVYWV+ A A+A TLLWK++EPK
Sbjct: 2 SAKMVGVFLQECFASFLMLVLLFPFGSFLGDTWMGWTAHFFCVMLHDWITGGSQVNPAVSIATTLYGWNTPASAAVRIAGQLVGGLAAFPVVARVLPPYV--KMGGPMLNT-TSVADGCAWEFGLTFALLILVYVAATQIGLPAQRPIIAGGIRTLIYY----GGKTGPAMNPMIALSWAYYAAPASINMDHFLVYWVSSTAGAIAATLLWKAVEPK 211
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: K8YV92_NANGC (Aquaporin sip1-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV92_NANGC) HSP 1 Score: 178 bits (452), Expect = 1.210e-47 Identity = 104/226 (46.02%), Postives = 139/226 (61.50%), Query Frame = 3
Query: 45 VGIFLQEAFGSFALLLMVFPFNSFLGDTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTGEGMAWEFGSTLALILIVYAAATQIGLPGQRPVIATGIRALIHLSAVKGGK-TGPAMNPMIATAWAVY-DSSVTMDAQWFLVYWVAPCAAAVAGTLLW-----KSLEPKPKAKTD 701
VG +QE FG+ + L+++PF LGDTW++W+ HFF VM+ D +GG+QVNP++SV F +G ++R++AQ+ G A+P++ KL PSY +GGP L G ST G EF T AL+ ++Y A T IG PGQRP+IA GIR LI V G TGPAMNPMIA WAV D+ T D +LVYW+AP AV T+L+ L+ + K K D
Sbjct: 13 VGAAIQEFFGALLMFLVLWPFVGVLGDTWTAWVAHFFFVMLCDIVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGVVAYPLLQKLSPSYV--GVGGPCLQDGVSTTTGALAEFTLTFALLTLIYLAITIIGAPGQRPIIAAGIRCLI----VAGTPYTGPAMNPMIAFGWAVQSDAYKTFDH--YLVYWIAPTVGAVLATVLFAVFQASFLDERKKNKAD 230
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A7S1VVQ9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVQ9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.150e-19 Identity = 70/224 (31.25%), Postives = 104/224 (46.43%), Query Frame = 3
Query: 54 FLQEAFGSFALLLMVFPFNSFLG--DTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTG---EGMAWEFGSTLALILIVYAAATQIGLPG-----QRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVY---DSSVTMDAQWFLVYWVAPCAAAVAGTLLWKSLEPKP 686
F E GS ++ F ++G +W+ HF V+ DY GG VNPA+++ + G + +RV AQ+ GG AFPI + + GGP E EF +T L++++Y + ++ + A GIRALI + GPAMNPM+ATAWA + +S D ++VYW+AP AAV +L W + P
Sbjct: 54 FRHEFVGSLLMIAFTFSAGKWIGKESVNVAWVSHFLGVIAADYFGGGPHVNPAVTLSMWSLGKCSYTEGYVRVAAQLGGGLVAFPIFHAISVALDWEPFGGPEFNMDDDEEHAVEAFMSEFCATFLLMILIYLVNWVLNFGTFHYWIKQSLTALGIRALIEIFPT----AGPAMNPMLATAWATFGTGNSQFPEDMDHYIVYWLAPGLAAVLASLCWALYDGGP 273
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A6U3A8R8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3A8R8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.240e-18 Identity = 66/213 (30.99%), Postives = 101/213 (47.42%), Query Frame = 3
Query: 63 EAFGSFALLLMVFPFNSFLG--DTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGAS--TGEGMAWEFGSTLALILIVYAAATQIGLPGQRPVI-----ATGIRALIHLSAVKGGKTGPAMNPMIATAWAVY---DSSVTMDAQWFLVYWVAPCAAAVAGTLLW 665
E G+ +++ F ++G D +W+ H V+ DY GG VNPA+++ + G + +RV QM GG AFP+ + + GGP + E EFG+T L+ +VY +I +I A +RALI GPA+NPM+AT WAV+ D S+ + VYW +PC AAVA ++++
Sbjct: 45 EFIGTLLMVVCTFSAGKWIGQDDMNIAWLSHAAGVVAADYFGGGQHVNPAVTMSMWALGKCSYTESYVRVSGQMAGGLVAFPLFHAVADALQMPPFGGPEFNTEDEDHSREAFLSEFGATFLLLWVVYLVNWEINFGTYHYLIKQTLTAAAVRALIEFFPT----AGPAINPMLATTWAVWGSGDMSMPSHFMHYFVYWASPCLAAVAASIIY 253
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A7S3LB05_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LB05_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.400e-18 Identity = 68/220 (30.91%), Postives = 101/220 (45.91%), Query Frame = 3
Query: 45 VGIFLQEAFGSFALLLMVFPFNSFLGDT--WSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTG--EGMAWEFGSTLALILIVYAAATQIGLPGQRPVI-----ATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDSSVTM----DAQWFLVYWVAPCAAAVAGTLLW 665
V F QE G+ +++ F ++G + +W H V+ DY GG QVNPA++VG + G + +R+ AQ+ GG AFP+ + +Y GGP G E EF +T L+ ++ + +I A IRALI GPAMNPM+AT+WAV+ D + VYW++PC A+V L+
Sbjct: 39 VQAFRQEFVGTLLMVMCTFSAGKWVGKASMYQAWGAHALGVISADYIGGGPQVNPAVTVGMWSLGKVTYTEGFVRIAAQLGGGLIAFPLFHAVAEAYDLEPFGGPEFDIGDKNAAIEAFLSEFCATALLMWAIFLLNWEFHFGKYHYIIKQSLTAVAIRALIEFFPT----AGPAMNPMLATSWAVFGVGEKFNYPDDFMHYFVYWISPCMASVFACALY 254
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A7R9WQP2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQP2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.740e-17 Identity = 66/219 (30.14%), Postives = 100/219 (45.66%), Query Frame = 3
Query: 39 KSVGIFLQEAFGSFALLLMVFPFNSFLG--DTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTG-EGMAWEFGSTLALILIVYAAATQIGLPGQRPVI-----ATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDSS----VTMDAQWFLVYWVAPCAAAVAGTL 659
K + ++ E GS ++ F ++G D + +W H V+ DY GG QVNPA++ + G + +RV QM GG +FP+ + S+ GGP ++ E EF ST L+ +Y ++ +I A IR LI + GPAMNPM+ATAW + + D Q + VYWVAP AA+ ++
Sbjct: 37 KHIKVYFDEFVGSILMIAFTFSAGKWIGQDDMYVAWGFHAVGVIAADYFGGGQQVNPAVTASMWALGECSYTEAFVRVAGQMGGGLVSFPLFQAISESFEMTPFGGPEFSSTRDEPVEATLSEFFSTYILLWAIYILNWRMHFGKHHYLIKQFLTAVAIRVLIEVYPT----AGPAMNPMLATAWDTFGVGNKYEMPSDHQHYFVYWVAPVVAAILASI 251
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A7S2SJE7_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJE7_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.500e-17 Identity = 67/230 (29.13%), Postives = 107/230 (46.52%), Query Frame = 3
Query: 60 QEAFGSFALLLMVFPFNSFLG-DTWS-SWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAA---GASTGEGMAW-EFGSTLALILIVYAAATQIGLPG-----QRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDSSVT-----------------MDAQWFLVYWVAPCAAAVAGTLLW 665
QE G+F ++ F ++G DTW +W+ H V+ D GG VNPA+SV + G + + +R+ QM GG AFP+ + S+GGP + G A+ EF +T+ L ++Y ++ ++ + A GIR LI + GPAMNPM+ T WAV++S+ DA+ + VYW++P A+ + L+
Sbjct: 41 QEFVGTFLMIAFTFSAGKWVGVDTWQVAWLAHAVGVIAADRIGGGPHVNPAVSVSMWSLGKCTYTEMYVRIAGQMGGGLLAFPLYRFFSNTLGWNSLGGPEFSLLDDDVDDGSDAAFSEFFATILLCFLIYLVNWELNFGKYHYWIKQTLTAFGIRYLIEVFPT----AGPAMNPMLGTTWAVFNSAFDSGADLDSEIWENMGTFPQDAEHYFVYWISPICGALTASFLY 266
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: B7FQU2_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQU2_PHATC) HSP 1 Score: 93.2 bits (230), Expect = 4.120e-17 Identity = 63/214 (29.44%), Postives = 101/214 (47.20%), Query Frame = 3
Query: 54 FLQEAFGSFALLLMVFPFNSFLG--DTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTG---EGMAWEFGSTLALILIVYAAATQIGLPGQRPVIATGIRALIHLSAVKGGKT-GPAMNPMIATAWAVYDSSVTM----DAQWFLVYWVAPCAAAVAGTLLW 665
F E FG+ ++ F ++G +W H V+ DY GG VNPA+++ + G + +RV AQ+ GG +FP+ + + GGP T E E+ +T+ L+ +Y ++ +I + A+ S ++G T GPAMNPM+ATAW V+ T D Q + VYW+AP AA+ ++L+
Sbjct: 42 FRHEFFGTMLMIGATFSAGKWIGKESLRMAWTSHGLGVIAADYLGGGPHVNPAVTMSMWCLGKVSYTEAFVRVAAQLGGGLISFPLYHAISNAMDLEPFGGPEFNIPDDTKHATEAFLSEYVATMLLMFTIYILNWEMNFGTYHYLIKQSLTAIAIRSLIEGFPTAGPAMNPMLATAWDVFGVGSTFEYPSDFQHYFVYWIAPWMAAITASMLY 255
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Match: A0A7S2PTV5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PTV5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.190e-17 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 3
Query: 39 KSVGIFLQEAFGSFALLLMVFPFNSFLG--DTWSSWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDRSSLMIRVVAQMVGGFYAFPIMAKLLPSYATASMGGPTLAAGASTGEG--MAW--EFGSTLALILIVYAAATQIGLPGQRPVIATGIRAL-IHLSAVKGGKTGPAMNPMIATAWAVYDS---SVTMDAQWFLVYWVAPCAAAVAGTLLW 665
K I+ E G+ ++ F ++G + + +W+ H V+ D GG VNP +SV + G S + +R+ + GG AFP+ K S + ++GGP A S+ E MA+ EF + L++ +Y ++ Q I + A+ I V GPA+NPM+ T+WAV+DS S+ D +++YWVA +A +++
Sbjct: 41 KYASIWKDEFVGTLLMIFFTFSPGKWVGVDNEYFAWVCHAIGVVAADKIGGGQHVNPTVSVTMYSLGKCSFSEMYVRICGAIAGGLVAFPLFLKFSDSLSLNALGGPAFDAETSSDEDFDMAFLSEFLAAFILLIAIYFLNWEVNFGAQHYWIKQTLTAVVIRYLIVVFPAAGPAINPMLGTSWAVFDSGAASLPTDTAHYVIYWVASILGGIASAIVY 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig858.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig858.8.2 >prot_P-littoralis_Contig858.8.2 ID=prot_P-littoralis_Contig858.8.2|Name=mRNA_P-littoralis_Contig858.8.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=226bp MASQKSVGIFLQEAFGSFALLLMVFPFNSFLGDTWSSWIQHFFSVMITDYback to top mRNA from alignment at P-littoralis_Contig858:13080..22395- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig858.8.2 ID=mRNA_P-littoralis_Contig858.8.2|Name=mRNA_P-littoralis_Contig858.8.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9316bp|location=Sequence derived from alignment at P-littoralis_Contig858:13080..22395- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig858:13080..22395- >mRNA_P-littoralis_Contig858.8.2 ID=mRNA_P-littoralis_Contig858.8.2|Name=mRNA_P-littoralis_Contig858.8.2|organism=Pylaiella littoralis U1_48|type=CDS|length=678bp|location=Sequence derived from alignment at P-littoralis_Contig858:13080..22395- (Pylaiella littoralis U1_48)back to top |