mRNA_P-littoralis_Contig857.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig857.16.1
Unique NamemRNA_P-littoralis_Contig857.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 9.250e-40
Identity = 126/381 (33.07%), Postives = 156/381 (40.94%), Query Frame = 1 
Query:  217 TGERPRRGLGFPFFVIGFGSLMSLVFILGDLINRRGFHPVSTGFFLLSTSYCVAIWRRHREITGAAVALSGQPSVLTKEARETLLTYFIFAH------QTVAADAAEGKVGQPQLQXXXXXXXXXXXPSSAALLDSSSGSRRWR----WERNAGSGRETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPATPVPSXXXXXXXXXXXXXXXXTAFI-AHAGRELLEDXXXXXXXXXXXXXXASRDQSCDRPSAAA-----GDLAQSRSETGEWSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLAESSSTRNGNAAAGGTGDGGAVGPDV----------QAVELTGDNAV 1281
            T  R   G   PF   G   ++S +FILGDL+N+R  HP S   FLLS SYCVA+ RR    TG      G+ +  TKEAR+ L+TYF+F            A A  GK G    Q            S   L  S + SRRWR               X                                   GP +P P                  A + A  G                       D + ++ SAAA      D  +++S++GEWST  ACIVCFGDY  GDRL  LPCRHVYHA+CI EWLDRA++PSCPLCKT+L  A     R+ + +  G                     + VE TGDNAV
Sbjct:   74 TTPRALEGSSLPFLA-GLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTR-EGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGA-----SGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXGAGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAATPTGPELPRATGEDAAEEQASAAAKAAAEDDPTRAQSDSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSISTAGXXXXXXXXXXXXXXXXXXXXXERVEFTGDNAV 447
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 3.220e-37
Identity = 108/313 (34.50%), Postives = 132/313 (42.17%), Query Frame = 1 
Query:  226 RPRRGLGFPFFVIGFGSLMSLVFILGDLINRRGFHPVSTGFFLLSTSYCVAIWRRHREITGAAVALSGQPSVLTKEARETLLTYFIFAHQTVAADAAEGKVGQPQLQXXXXXXXXXXXPSSAALLDSSSGSRRWRWERNAGSGRETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPATPVPSXXXXXXXXXXXXXXXXTAFIAHAGRELLEDXXXXXXXXXXXXXXASRDQSCDRPSAAAGDLAQSRSETGEWSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNL 1164
            R R G   P  + G  ++MS++FILGDL+N+R  HPVSTG FLLS SYCVA+ RR    TG      G  +  TKEARE L+TYF+F           G  G P               +         G+R  + ER  G+                                                                      +G EL                 + R+Q     +AA  D      ++GEWST  ACIVCFGDY  GDRL RLPCRHVYHA+CI EWLDRA+LPSCPLCKT+L
Sbjct:   95 RGREGSSLPL-LSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTR-EGCNNSFTKEAREELITYFVFG---------AGPEGLPT-----------EAGAXXXXXXXKKGNRPKQQERGNGA----------------------------------------------------------------------SGDEL----------QLLRLVLSYREQPVKVKAAAEEDDPARACDSGEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDL 305
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.360e-27
Identity = 67/108 (62.04%), Postives = 71/108 (65.74%), Query Frame = 1 
Query:  994 ETGEWSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLA-------ESSSTRNG-----NAAAGGTGDGGAVGPDVQAVELTGDNAV 1281
            +TGEWST  ACIVCF DY  GDRL RLPCRHVYHA+CI EWLDRA+LPSCPLCKT+L  A        S ST  G     NAA  G G GG  G     VE TGDNAV
Sbjct:  149 DTGEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSISTVGGAGTSVNAARVGGGSGGGEG-----VEFTGDNAV 251
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.230e-18
Identity = 45/88 (51.14%), Postives = 55/88 (62.50%), Query Frame = 1 
Query: 1006 WSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLAES--SSTRNGNAAAGGTGDGGAVGPDVQAVEL 1263
            WS   +CI+CFG+YA+GD LCRLPCRH YHAECI  WLD      CPLCK++LLL     +S+ NG  A GG  +      D  A +L
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSEPRNSSENGETADGGGTNASTTSADSNAEQL 159
[Close]
BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.140e-14
Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 1 
Query: 1006 WSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLAESSSTRNGNAAAGGTG 1221
            WS+  +CI+CFG+YA+GD LCRLPCRH YHAECI  WLD      CPLCK++LL        + N   GG G
Sbjct:  452 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNGSDNDEIGGAG 523
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A6V7Q3M8_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q3M8_ANACO)

HSP 1 Score: 67.4 bits (163), Expect = 6.030e-10
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 1 
Query:  973 DLAQSRSETGE-WSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCK 1155
            D  + R E G  W  + AC +C  ++ +G RLC++PC H +H EC+  WL+R+RL  CPLC+
Sbjct:   64 DRMRYRDEEGRGWCRERACSICMDEFEEGARLCKIPCSHAFHEECLTRWLERSRL--CPLCR 123
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A6P5G894_ANACO (uncharacterized protein LOC109721570 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5G894_ANACO)

HSP 1 Score: 67.8 bits (164), Expect = 6.730e-9
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 1 
Query:  973 DLAQSRSETGE-WSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNL 1164
            D  + R E G  W  + AC +C  ++ +G RLC++PC H +H EC+  WL+R+RL  CPLC+ ++
Sbjct:  212 DRMRYRDEEGRGWCRERACSICMDEFEEGARLCKIPCSHAFHEECLTRWLERSRL--CPLCRYSI 274
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-8
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1 
Query:  994 ETGEWSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLA 1173
            E GE   +L C +C  D+A GD+L RLPCRH +H  CI EWL R  +  CP+CK +L  A
Sbjct:   61 EEGEEGAEL-CTICLDDFAKGDQLRRLPCRHHFHVTCIDEWLGRRSM--CPVCKHDLSRA 117
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A7S4DFB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFB0_HETAK)

HSP 1 Score: 65.1 bits (157), Expect = 1.190e-8
Identity = 31/55 (56.36%), Postives = 35/55 (63.64%), Query Frame = 1 
Query: 1006 WSTDLA-CIVCFGDYADGDRLCRL-PCRHVYHAECIHEWLDRARLPSCPLCKTNL 1164
            W  DL  C +C GDY  G+RLC L PCRHV+HA CI EWL   +   CP CK NL
Sbjct:   81 WMQDLKDCPICLGDYQTGERLCALAPCRHVFHAGCIDEWLKSHQ--ECPNCKVNL 133
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BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Match: A0A7S1W4K0_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W4K0_ALECA)

HSP 1 Score: 67.8 bits (164), Expect = 2.510e-8
Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 1 
Query:  961 AAAGDLAQSRSETGEWSTDLACIVCFGDYADGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLAESSSTRNGNAAAGGTG--DGG 1230
            +AAG   + RS+     T   C+VC  ++ADG+ L +L C H++H EC+ EWL R+  P+CP+CK ++    SSS+  G A  G +G  DGG
Sbjct:  340 SAAGRTVEWRSQERIGETQEQCMVCLTEFADGECLRQLGCDHLFHRECVDEWLQRS--PACPICKQSV----SSSSSRGGAGRGRSGADDGG 425
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig857.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ1_ECTSI9.250e-4033.07RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI3.220e-3734.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE3.360e-2762.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE1.230e-1851.14RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI1.140e-1454.17RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6V7Q3M8_ANACO6.030e-1043.55RING-type domain-containing protein n=1 Tax=Ananas... [more]
A0A6P5G894_ANACO6.730e-941.54uncharacterized protein LOC109721570 n=2 Tax=Anana... [more]
A0A7S0QVM1_9CHLO1.190e-850.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S4DFB0_HETAK1.190e-856.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1W4K0_ALECA2.510e-841.30Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig857contigP-littoralis_Contig857:61653..71509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRQ1
PFAMsPA,zf-RING_11,zf-RING_2
Model size1591
Max annot lvl2759|Eukaryota
KEGG koko:K03257,ko:K15694
KEGG Pathwayko03013,map03013
KEGG ModuleM00428
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.76e-41
EggNOG OGsKOG4628@1|root,KOG4628@2759|Eukaryota
EC2.3.2.27
Descriptionprotein modification by small protein conjugation or removal
Cds size1284
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03019,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig857.16.1prot_P-littoralis_Contig857.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig857 61653..71202 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791725.998331-CDS-P-littoralis_Contig857:61652..619311680791725.998331-CDS-P-littoralis_Contig857:61652..61931Pylaiella littoralis U1_48CDSP-littoralis_Contig857 61653..61931 +
1680791726.0099308-CDS-P-littoralis_Contig857:68505..686261680791726.0099308-CDS-P-littoralis_Contig857:68505..68626Pylaiella littoralis U1_48CDSP-littoralis_Contig857 68506..68626 +
1680791726.021902-CDS-P-littoralis_Contig857:69379..699311680791726.021902-CDS-P-littoralis_Contig857:69379..69931Pylaiella littoralis U1_48CDSP-littoralis_Contig857 69380..69931 +
1680791726.0330727-CDS-P-littoralis_Contig857:70341..704901680791726.0330727-CDS-P-littoralis_Contig857:70341..70490Pylaiella littoralis U1_48CDSP-littoralis_Contig857 70342..70490 +
1680791726.0434697-CDS-P-littoralis_Contig857:71019..712021680791726.0434697-CDS-P-littoralis_Contig857:71019..71202Pylaiella littoralis U1_48CDSP-littoralis_Contig857 71020..71202 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791726.0532823-UTR-P-littoralis_Contig857:71202..715091680791726.0532823-UTR-P-littoralis_Contig857:71202..71509Pylaiella littoralis U1_48UTRP-littoralis_Contig857 71203..71509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig857.16.1

>prot_P-littoralis_Contig857.16.1 ID=prot_P-littoralis_Contig857.16.1|Name=mRNA_P-littoralis_Contig857.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=428bp
MSAAVSQAPALPVHDIEAPLPTAVVGAAAAAAAAAAGTNGRQPQGHEHQA
TAAVEVEAEPDAGAGAGDGSSATGERPRRGLGFPFFVIGFGSLMSLVFIL
GDLINRRGFHPVSTGFFLLSTSYCVAIWRRHREITGAAVALSGQPSVLTK
EARETLLTYFIFAHQTVAADAAEGKVGQPQLQQQQQQPQGKGLPSSAALL
DSSSGSRRWRWERNAGSGRETGRESGASSGGGGRQDNHTGTNTDTDETPV
STPIASPGPATPVPSEQQPHPHGAAAAAAAATAFIAHAGRELLEDEEDDK
EDEEVGGGGASRDQSCDRPSAAAGDLAQSRSETGEWSTDLACIVCFGDYA
DGDRLCRLPCRHVYHAECIHEWLDRARLPSCPLCKTNLLLAESSSTRNGN
AAAGGTGDGGAVGPDVQAVELTGDNAV*
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mRNA from alignment at P-littoralis_Contig857:61653..71509+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig857.16.1 ID=mRNA_P-littoralis_Contig857.16.1|Name=mRNA_P-littoralis_Contig857.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9857bp|location=Sequence derived from alignment at P-littoralis_Contig857:61653..71509+ (Pylaiella littoralis U1_48)
ATGTCTGCTGCCGTTTCCCAGGCTCCGGCGTTGCCTGTCCACGATATCGA
GGCACCTCTACCCACAGCAGTAGTAGGAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCGGGCACCAACGGCCGACAACCGCAAGGACACGAACATCAGGCT
ACAGCAGCTGTAGAAGTTGAGGCTGAGCCGGATGCTGGTGCTGGTGCTGG
TGATGGTTCCTCCGCTACGGGCGAGAGACCACGAAGAGGACTAGGCTTCC
CTTTTTTTGTGATCGGGTTCGGCAGCTTGGTGAGAGGAAAATTCAAGTTT
GAATCCACACTTCGCCTGTCTCACCCACACACATTCAATTCCGGTGGTGG
TGCTGCTATTGTCAGGGAGCTTTTGCTGTGAGTTGTGGAGCGCCGTAAGT
GCTTGACGGGAGGCTACAACGGCAGTGTGCCCCGTACGGATTGTACAGGG
CAGGTGGCAGCAGGATACAGAAGCATTTCGTACTGTAGATGATTGTATGA
TATGTATCATAGACGAAGTACTTACCATATATCTTATCCTCTGCGAACAG
AAAAGATCGCACTCGCATACGGTAAAAAAATATACCGAAGTACTTCGTAC
TTCATCTATGTATAATTCGAGTATAATGCACTCCAATGATGGGCCCATAT
ATATTTTCATAATTATCCAATACTTGAAGAACGTTCACCCTCTCTTGTTG
CACTTGCAGTATTTGGTTTGTTGTTGTAACGGCGGATGCGTGTGTGTGTT
GTTGTTATTGTTGGTTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCC
GTGGTCACAAACCAGGCACATACTTCCTCTGTATCATAAGTCTGTGCCGT
GATGGGCGTGTAATTGTTTGCGCATCCATGCTGTTTCGATAATCCTATAG
TTAGGTTCGTTCGAAAGATGAATTCTCAAAGAAGCTGATGCAAAAAAAAA
AAGCAAAAAAAGCCTGTTGTTTTATACTCCGTACTAAAATGAAGTCAAAA
TATGCCCATTTTGGCCCATTTAAAGAATTTTGATTCCGCCAGATGTCTTG
GTTTTAGAGCATGAGTCCCACGTATCTTCGTTTTAGTGTAGTAAACCCAA
GTGTCTTGGTTTTAGGGTCGCGTCACTGTTATACTGATTTTAGTGAGGAG
GGACTCGACATGAATCTTTGAGGTAGGGGGGCTAGGTTCGGGGTTAGGGA
TAATTTTGGGGGTGATTGCATTGGTTTTTTTTTTTGCCCCCGCCCCCCCC
CTCCACCTCTGGAAAGGGTTAAACACGGCCATTTTTGGCCTGACTACTTT
TTTGTTAGCCGCTAGCCCATGCGCAGGGTAGGTAGTGCGCAAGAAAAAAA
ATATATACCCGGAGTATATGCGTTTCAACCCAAAAAACTCCGAAGATTTC
GAAAAAATTATCGACGAAGACATCGGACACCGTTGAGGGGGCGTAAAAAC
ATAACGGCACAGACTTATGATACAGAGGAAGTATCGCGCTAGGAGGAAAA
AAAATAAAATAAAATAAGCGGACTATGATCACCCACAGTCAAATCGGATA
TGGTACCGTTGGGGCACAGTACCATCTGTGGTGGCCAAAGTACCAAACAA
AATACAGAAAAAATAGCAGGTTCGAAAGAAAAAACAAAAATTGGAAACAG
TACGGCAAACAAAAAGTAACCAAGACAAACCTCAACCATAACCATATACT
TCGAAGTACTTCGTACATCGAACCAGGGCCCAGGGTCATGGCAGACCAAG
GCAAAGGCAAACCAGGGGGATGGTCCAGTAACTATATGATCAACAGACGA
AAGACAAAAAATTAACAAGAAGATACAGGGAGGGCACAAAGACTGAGGGA
GTGCACTCGTACACAAACACAACAAACAGGCCGCCAAACAAAGAGGAAGC
AGGGGAACGAAAAGGGAAAAGAAAAAAAAGAGACAAAGAGGAACAAAATA
CATGCATGGAGAGTGCAGAGGGAAGACTGGAAGTCAGTACCGGAAGTCGG
GGAGGGGGAGGGGGAGGTGATAAAAATAAAATAAAAGGCATGCAATCAAT
CACAAACATGCCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCA
GTCGCACTCATGCCTCCTGCTACTGGCACCACCGTACCCAGTTGTTTCTG
CCCCACATCTTTGGCAGCAGCTACGCCACCATTCCGCTTTACAGATTTTC
CACTCCGGCCACCCCGTAGCTTGGCTTTGGACTGCTTCTTCTTGTGCTGT
GCAACTCCAACCCCACTACTCCGCTGCCCTTGTGCCCCCCCGTACCCCTC
CTCTCGTTTATCCCCGCCATCCGTTCTCCCTCTTTTGGCCAAGGACTGCC
CCTCAGCCGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAAGTCT
CCCTCTTTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGAT
CCTGTCGTACCACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCCTCGT
TTTTGTCGACAACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCTC
AGCCAGTCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGTAATTC
TTCCAAAAGAGCAATTTTCGGGAGCCTCTCGTCTCTCATGCGCGCAACGA
ATCCTGCGAAGTACAGTCGCCGCTTGCGCACGGTGGCCTCAATGCTCTCG
TCGCAACCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGATCGGACTGT
TCTCTCCCTCTTTTTCCATTCGATGCAGCGAAGGAGGAAGAAGTGGTGGG
CTGACCGAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACAC
CCGTAGAGTAGGGTCTCCACGACTTCGGCTTGGAGGAGTCGTACTTTTAG
TCGAAGAGGGGCCCCCGGGCGGTTGTACATTGCCTGGCTGTTGCGCCGGA
AGCAGGCGTGCGCTCGCTGCACTCGGTGGTTAATCTCGCCCTCAATGCTA
CCGTCCTCACAAATCTTACCCCCGAGATAAACAAAGTATTTCTTCTGCTT
GAAGACCATCCCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCCCTT
TCGCAAGCATACACATGGTCTCCGTCTTGGGTTCTGACACCAACAGCCCA
AACCGCCCGGCCACACGTACGATGATCGACATCATCTTCTCCAGGCTCCC
AGGTGATTGAGAAACAATACAGGCGTCGTCGGCGTAGAGCATACCCCAGA
TGGACTTCACTGCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTCATG
ACCTTCCTCTTGACCTTGGCCATGTCCGCCATCACCTCCGCGTCCTTGCT
GATTTCGGCAAAGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGAACA
GCAGGGGCGCCAGATTGCATCCCTGTCGGAGTCCCTGCCCCACATCAAAC
CAGTCGGAGCACCTCCCGTCGTTCATCCGTACGCATGCTCTCATTCCGTC
GTGGAATTGGCGAATGACCGCAAGCATCTTGGGGGGCACTCCGAGCCGCT
TGAGCACCGACCACAGTAGTTCCCGGTCTACGGAGTCGTAGGCTTTCGTG
AGGTCAATGAAGCAGGCGTACAGTGGGGTTGACTTCTTCCGCGCAAGCTC
GTGTAGGCGTCGAACCACGAACATTATGTCAACCATTGAGCGGTTTGGTC
GGAAACCGCTCTGTTCCTCCGGCAGAATGCCCTCTCTTTCGCAGTAATCG
CTTGGTCGGGTGGCGACCAGCTTCAAGAGTACCTTGCCAGCGTGGGCCAC
AAGGGAGATGCCTCGGTATTTGCCGCATTCCGTCTTGTCCTTCTTCTTGT
GCAGCACCTTGATCGAAGCATCTTTCCACTGCTGTGGCACCCTTCCCGAT
TGCCAGATGTTGACGATGATACTGTAGAACTGCCGTCGGAGGACTTGGTT
TCCGTCAAGGAAGAGCTTGATAAGCTCCGCCGGTAGCTCGTCCGGGCCCA
CAGCTTTCATGTTGGCCATTCCCCGGATTGCTTCCTCAACCTCAAATAGC
GAAGGGACGTCATCAAGCGGTACGCACTGAGGCCAGGGCTCGATCTTCCC
ACCACTCTCGGATCCAGGGTCGGTGACTTGGTGTTGATCAGAGCATGGAA
CCACCTGGCCCACCGCTCGAGGATAAGTGCGGAGTCCCGAAGAAGATTTC
CATCCTCGTCCTTGATGTTCTGTGAGGTGAAGGCCCTCTTCCCCTCCACA
TCCAATCCCTTCATGTGCTTGTAGAAACCGGCCTGGTCCCCTTCGCGGCT
TTTCTTCTCGAGCTGACTCACAAATCCATCGAAGAACTCATTCACAGCAC
TGGCTCTAAGTCGATCAAGGTGCTTCCCGGCCGCCTTGAGGTTGCTCCTG
AGGGTGGGATCTTTCGGTGCGCCGCGAAGCTGCTTCCGGGCGTCCTCCCT
CTTGAGCCATGCCACGTGGATCTCCTGCTGCACTTCCTCACTGGCGCACC
AGCCACTTGGCAATCTCTTGCCCTTGGCCCGGGGGGCAACGTCAGCGGCG
GTGGACATCACAGCAGTGTGTGTGTGGTTGTTGTTGGTACTGCTGCTGTT
AGGCTCTTTCCAATCACCTCGCTTGATTACAACAAACGTTTGATTGGATT
CACTGAAAAGAGAAAAAATATTTCCGCGTTTCTAATCGTCTTGGGTATGA
TGCTTTTTCGTGAGAAATCCGAACAAACTACACTTCACAACACAGGGCAC
CAACGGAGCTTGGAGACCTCCCAAGTCCTGATTATTTCGAAACAGAAGTC
TCCATGATGGTGGCCCTCGATACCGCCACCGCTAAGCAGTTGTCACAGGT
TGTGTGAGGAGAAAAGAGGGTCGCAAGGAGAGGGTGTGTGTTGTTGATGC
GACCCCAAATTGAGAAGGTGATGTTTTTTGGTGCCAATCACAAACAATAA
TTCACGGCATCAGACAGCATCCGAGCTACAAAGCCCCCGAAGTCCCGATT
CTTTCGAAGCAGAGGTCTACGTGATAGTGGCCCTCGACAGCGCTCCCGCT
ACAAGGTTGTCACGGCTCGGTCGCTGGCTTAAAACGGGTTGCCAGAAGTG
GGTGTAGGTTGGTGCAGCAAGAAAAAGAGGCAGACAAGCGGCGAAATAAA
GGATTCCGATTCATGTGGTCGCTGTTGCTGTATATTTTCACCACACGTAT
CGCCACACCTGCTGGAATGCGCAGACCAGGGGTGGATTTGCTTGCCATAG
TGTTTGTCTTTGGTGCCCTGATCTTTCTTTGCCTGTCTACTCCGCTGTTG
CTGCTGATGGGCGAGGTAGGTGTGTAATAGGTATGTTTGAAAAAAAAACC
ACGATTGTTGTAATTGAATATCCGACGATTTTTTGGCGGCGTTCAATTCC
CACGATCGTTGTAAGAAAGCCTCCATAGTGTCCGACTTTACAACGTTTGT
TGTAAAATTACAACAAACGTTGGAATTTCGCGAGGTGATTGGAAAGAGCC
TACTGCTTGTTTAATGTCATACCCAGGTACAGCAGTACCAGGTGTTGTCA
TCACGATGAACATCCACTGCGATCTCTGCAGTATGTATCGCGTCGAGTAC
TACCGTAATACAAAGCACATCCGCAAACGAACATTTGTCCAAGGCTCCTG
TTTTGCTCCTTGTCAAAGAATGTTACACGCGCGACTCAGCAGGGTGCATT
TTTCCGAACGTGAAACGAACCAAGCTGATTGTCAAACCTCGAAATCACCC
TGTTATGCCGGAAAAGAGTGCCCGGGTGCACCCCGCGAAGGCTACTTTTC
TTCAGAACTACGCCCTGATTTTTGAAAAGCACCCTGTTGTGTCAAATGAG
ACCCCTCCACCGGGTATTCCTTCCGCAGGAATCACTTGCACGTCTCGCAC
ACGACGTGGAAGGTCGCCCTGTCGGCTGATGGACCGTTCTTGATGGAACG
ACCGGTCGAGGCAAGCTCGGTCTCTGCCGCAGTCCTCGCAGTGTCGCGAC
TGGGGAACAGTCGATCTTTGTCGATGGCCGGATCAGTAGGCAGGGACAGG
CCCGCCGCCGCAGCTGTCACCCCACTGGCCGCCCATTCCATACCTCCTTT
GTGTGTTGTGTGGCTACTTTGTCGTTCTGCGTTCTTCTTGTGTGCTCTAC
GAGTGTTTGCAGCAGGGCCAACAAATTGTTCTGTTTCGGGCTGGTGTCTG
CTGTCGGCGGATCTGCAGTTTATTTGCTGGCACGGCACTTTCTCTGATCT
GTTGGCACAGCACTGTGCCATTGTCTGTTTAGAGCCTAAAGAGTCGATGT
GGAGGGGTATGCGGTGGGTCAGTCGTGCCGGTCATCCTACAGTATGGTGT
TCCACCATTATATGCTTGGCGGTGGAAGATCTCATATTTGGTGCCCTTTG
GCTGGTGCAGAAAGTGATTCCTGCGGAAGGAACATCCGGTGGAGGGGTCT
CATTTACCGACACAACAGGGTGCTTTTCAAGAATCAGGGTGTAGTTCTGA
AGAATAATAGCCTTCGCGGGGTGCACCCGGGCACTCTTTTCCGGCTCAAC
AGGGTGATTTCGAGGTTTGACCAATCAGCTTGGTTCGTTTCACGCTCGGA
AAAGGTGTGCACCCTGCCGAGTCGCAGAATGACCAGGGTGCACCCTGATG
TGCCGTTTCCCCTAAATAAACCTGACCAGTGTTCAGCAAGCAAAGCCTAC
CCAATTGGTAGGTGTATAACATTGCTCACGTTCGTGTATTTTCTTTCGGT
GTTTCGGCACATATCATGTTGTGCCCACCAATAGTAATGTGCTCGTGTTG
AATCTCCTGTTTCTATGTGCCTGTGTCGTGCACTGTTGTTCCGCAAAACA
CAGATGTCGCTGGTTTTCATCCTGGGCGACCTCATTAACAGAAGAGGTTT
TCACCCCGTCAGTACGGGTTTTTTTCTGCTGTCGACAAGCTACTGCGTCG
CAATTTGGCGGCGGCACCGGGAGAGTCTCCAGGAGCAAGAAGGTGCGAAA
AAAAAAGAACGTTGAAAACCATAGTACAATACAGCGGTACTGACTTTTAC
GGTGAGAGTTCGGCACCTTGCTCAGGTGTGAATGACCGGCAAAAGCAAGC
ACACAAACGACAAAAAAACCAGACACAGGCAATCAAACTAAATTGAATGA
CAGCGATAAGAACAACGGACGACAGCAGCACAGCCGTTGAGACGGATCGT
GTGCTTGCTCCCTTGTTATGTACGGAAAATGGGGCAGTGCCATCTACACA
GGGAGCAGCAGCGATAACACACTTGGTGTGCACGTTTGATGCAAAGCATC
TAAATACATCAACAATAATACACGAAGACGTGCGGCGGCCGTGCGGAAGA
GGCACCGCTGTAGAGCAGTAGTACGATGCCCCTACAGGCCGACACGAGGA
AAAATCGAACCAACGGAACCTTCCTTGGACGTTGCAGTATTTCCCGCCAA
GGAAAATTATCCCTGCTCCCGCAATCACAAATGGTCGGAAAAGCTGTCAA
ACCCTGAGCACAGCCCGAGCACAAAACCCACAGCAGACGCCAAAACCGCG
GTGCCACCCACTCCCCGCATCATTTTTCTGTTCGCCATCAACTTCGACCG
TTCCGTTCTTACCAAGTGAACCACCACAAGTACCGCCAACATTATCAACC
ACCTTCGTCGCGACCATCACCACGATCGCCACAACAATCACCAACATTAC
CATTTATGGTGCTCTTATTTTGGGCAGTTACAGGCGCGGCGGTGGCGCTC
TCGGGGCAGCCCAGCGTCCTGACAAAGGAAGCACGAGAGACGCTGCTGAC
ATATTTCATATTTGCTCACCAAACGGTGGCGGCGGATGCCGCGGAAGGAA
AAGTGGGCCAACCACAACTGCAGCAACAACAGCAGCAGCCCCAAGGCAAA
GGGCTGCCCAGTAGTGCTGCCCTTCTTGACAGCAGCAGCGGCAGCAGAAG
GTGGCGATGGGAGAGGAATGCCGGCAGTGGCCGAGAGACTGGACGGGAGA
GCGGGGCCAGCAGCGGCGGTGGCGGGAGGCAGGACAACCACACCGGCACC
AACACCGACACCGACGAGACTCCTGTTAGCACGCCGATCGCTTCCCCCGG
CCCTGCTACCCCCGTGCCATCAGAACAACAGCCTCACCCGCATGGCGCTG
CTGCTGCTGCTGCTGCTGCGACCGCCTTTATTGCTCATGCTGGCCGCGAG
CTACTGGAGGACGAGGAAGACGATAAGGAGGACGAGGAGGTCGGAGGGGG
GGGAGCTAGCCGAGATCAAAGCTGTGATCGTCACCAGCTTCGGAGGGGCG
GTTCGGCACCGTTTGATAGCCGGAACCCCGTCGCCGTGCCCAACACCACT
ACTAGCGCTGCTCCTGCTCGTACCACTACCGGGACGTCCAGCGACAACGC
GGAAGAAACGCCTCCTACTGCAACGGCCAAGACAGGTATTGTTTATGGGG
GAGGGGGGAGGATTCTGATGCGTCAACCAAACCACGCAATGAAGGCGAAG
AAATTCTGGTTCATCATGACACTGGTACATGACAAATGTGTAAACAATAG
ACTTGATGTCCGACCTCACCAATAACGTTATCACACACAAACAAATCACG
ATCAGAACGAAAAAGAGAGTACGTTTTCGCACAACTGCTGTCTCTCATTT
GTGTTACACGTGCGCACCGACCACCGGGACCAACCGCAGGCCCTTCAGCA
GCGGCGGGTGACTTGGCCCAGAGCCGTTCCGAAACAGGAGAGTGGTCGAC
GGACTTAGCTTGCATCGTGTGCTTCGGCGACTACGCTGACGGAGATAGGC
TATGCCGGCTGCCTTGTCGACACGTCTACCACGCGGAGGTACGTGCTGAC
CGTAGTGATATCCCTGCCCTGACACCGAAAACTATTTATTCATTTATCCC
GTGTCCTCCCTCTCACATAAAAATATCGATTCAAAAGTCGATTTAATAAG
ATGTCGATGTAATTGGTAGTCCGTTAAAAACCACGCCAACATCCCGTAGG
GTACTTCGCCGTGTAGGTTTCTTGCCGAATATTTTCATGAAGTACGTACC
AGTTTGACAACGATACTTTTAAGAGCTAATTACCATGTGCTTCACCTGTG
TCATTTGAAAAGACACGTGAAGAGGTGGAACAGATCACTGTCAGAAGAAA
GCTCGCTTCCAGAGGGAAAAAAATGGGCGGCGGGCTGGAAAAGATACCAA
AAGTAGAGGGGAAACCTTATTTTGAGGCTTCGTACCATTCTCAACTTCGA
ACCGAAGTTTACGACTTGACAACTGGATCACGAACATCGAAAAACGTCAA
GCTAACGCTCTCTCCCCCCTTGTCCTTTTCCCCGTCAACAATCGGAATAC
TGACCGACGAACAACAGTGCATCCACGAGTGGTTGGACCGGGCAAGGCTT
CCTAGCTGCCCTCTGTGCAAGACCAACCTCCTCCTGGCCGAAAGTTCGAG
CACCCGAAATGGCAACGCAGCTGCTGGTGGGACTGGTGATGGTGGTGCTG
TTGGGCCTGACGTACAGGCAGTGGAATTGACCGGCGACAACGCGGTGTAA
TGGTTGATACATGTGGGTATGTACGAGAGGGCTTCCGGCTACTTCATGTT
ATGGGTCGAGATACACAGTAGAAACGTTGCGCGTGAATGTCATGGGGAGG
GATACGGCGCAGAAAGTTGTACGTCGATGTCATGAATAGAAATGCAGCGC
AGAAACGTTGTATCATACATGTCTCCTTTGAGCGTCATGCCAAGGAGTAC
GTGTCTGGTCTGGAGACGATGTACCCGAAGAACAAATGAAAAATTGCCTC
GGAGAAGCAAAGGGTGCGGTAAAAGTGCGAAGTAGAAGTAATATTTTTAC
GCGCGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig857:61653..71509+

>mRNA_P-littoralis_Contig857.16.1 ID=mRNA_P-littoralis_Contig857.16.1|Name=mRNA_P-littoralis_Contig857.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1284bp|location=Sequence derived from alignment at P-littoralis_Contig857:61653..71509+ (Pylaiella littoralis U1_48)
ATGTCTGCTGCCGTTTCCCAGGCTCCGGCGTTGCCTGTCCACGATATCGA
GGCACCTCTACCCACAGCAGTAGTAGGAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCGGGCACCAACGGCCGACAACCGCAAGGACACGAACATCAGGCT
ACAGCAGCTGTAGAAGTTGAGGCTGAGCCGGATGCTGGTGCTGGTGCTGG
TGATGGTTCCTCCGCTACGGGCGAGAGACCACGAAGAGGACTAGGCTTCC
CTTTTTTTGTGATCGGGTTCGGCAGCTTGATGTCGCTGGTTTTCATCCTG
GGCGACCTCATTAACAGAAGAGGTTTTCACCCCGTCAGTACGGGTTTTTT
TCTGCTGTCGACAAGCTACTGCGTCGCAATTTGGCGGCGGCACCGGGAGA
TTACAGGCGCGGCGGTGGCGCTCTCGGGGCAGCCCAGCGTCCTGACAAAG
GAAGCACGAGAGACGCTGCTGACATATTTCATATTTGCTCACCAAACGGT
GGCGGCGGATGCCGCGGAAGGAAAAGTGGGCCAACCACAACTGCAGCAAC
AACAGCAGCAGCCCCAAGGCAAAGGGCTGCCCAGTAGTGCTGCCCTTCTT
GACAGCAGCAGCGGCAGCAGAAGGTGGCGATGGGAGAGGAATGCCGGCAG
TGGCCGAGAGACTGGACGGGAGAGCGGGGCCAGCAGCGGCGGTGGCGGGA
GGCAGGACAACCACACCGGCACCAACACCGACACCGACGAGACTCCTGTT
AGCACGCCGATCGCTTCCCCCGGCCCTGCTACCCCCGTGCCATCAGAACA
ACAGCCTCACCCGCATGGCGCTGCTGCTGCTGCTGCTGCTGCGACCGCCT
TTATTGCTCATGCTGGCCGCGAGCTACTGGAGGACGAGGAAGACGATAAG
GAGGACGAGGAGGTCGGAGGGGGGGGAGCTAGCCGAGATCAAAGCTGTGA
TCGCCCTTCAGCAGCGGCGGGTGACTTGGCCCAGAGCCGTTCCGAAACAG
GAGAGTGGTCGACGGACTTAGCTTGCATCGTGTGCTTCGGCGACTACGCT
GACGGAGATAGGCTATGCCGGCTGCCTTGTCGACACGTCTACCACGCGGA
GTGCATCCACGAGTGGTTGGACCGGGCAAGGCTTCCTAGCTGCCCTCTGT
GCAAGACCAACCTCCTCCTGGCCGAAAGTTCGAGCACCCGAAATGGCAAC
GCAGCTGCTGGTGGGACTGGTGATGGTGGTGCTGTTGGGCCTGACGTACA
GGCAGTGGAATTGACCGGCGACAACGCGGTGTAA
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