mRNA_P-littoralis_Contig856.8.11 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: D7G0G4_ECTSI (ATP binding / ATP-dependent helicase/ DNA binding / DNA-directed DNA polymerase/ helicase/ nucleic a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0G4_ECTSI) HSP 1 Score: 1457 bits (3772), Expect = 0.000e+0 Identity = 808/1074 (75.23%), Postives = 864/1074 (80.45%), Query Frame = 2
Query: 2468 DRISTTPPEVRFETARQQLYKNTRSGTTGRGGRGRXXXRAXXXXXXXXXXXXXXAPRPAQDALVGVWRTEPAKKKGERGTRFYLTLSGQKLTGREATRAAEEDKKAVNKGVGPAAKDRSMIMSRIGQVVEAESCEEACG-EKYLHEDALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCPHNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTG--AQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKA-ERPRPVC-PTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKGGGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILEGVLHKACDSAVEFLLKHNFVVKSGGSGKE-CMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFREEYLACSKDDPVRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRG----RTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSVGWDESVERHRAKQARLLAENIIRLASAEVVRQIRRQLANSVS 5659
D TPPEVRFE A QQLYKN+RSGTTGRGGRGRXXX XXXXXXXX APRPAQDALVGVWR+ PAKKKGERGT+FY++LSGQKL+GREATR A ED+K V +G+GP KDRS IM RIGQ E SC+EA G EKYLHEDALKL TY IPEQLVESYAK SAPTSGGKTLVAELLLLRALLKH+GTMALLVVPYVALALEKRDY RDVWSPLQLN+QAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRL ALSAVVVDEMHLIGD ARGFLLELMLTKQR+LCP+NVQL+CLSATLPNIECLAKWLDASLYRT YRPVELRH+VC+GRAVYRP+RIRGTG A G DE +LEK VVGG IK+VGGTSP +DPDGVVDLVKDALARDMSVLVFCSTKKWCQQTA LLAKE+L DRNRAA EG KA ER R PTTAD VRE+LRQTPVGLDA+LSYLVG GIAFHHSGLVVEERSILE+AFR GSIRVLVATSTLAAGVNLPAHRVIIRSPS+GIGLLDSTRYHQMAGRSGRAGV RG EGG+A QG+D A GESFLILPKNVKFTLSDAS LISAPLPKLESALR A+GGGLERALLEV+VS TVTS+ GARRF +TLLAAQI E + KACDSA+ +LLKHNFVV+ GG E C DY++APTQLGRATFFSGLSPSAAVDVF SLDKACQNFAVAS+LHALVLVTPL+GIEPNW RFREEYLACS DDPVRVVG LIG+ELGVLV AAG+T PKYG+R Y++SRG R VDLQPYRRLYGAMLLQQAVEEVPVRNMA RLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARAL +AGYPSP EL TA+A+RVADVLLRCAPFRS GWDESVER+RAKQA LA+N+I LASAEV+RQI R+LA++ +
Sbjct: 570 DGSCKTPPEVRFEVAHQQLYKNSRSGTTGRGGRGRXXXXXXXXXXXXXAKRGSTAPRPAQDALVGVWRSMPAKKKGERGTQFYISLSGQKLSGREATRVAAEDQKRVKEGLGPVTKDRSAIM-RIGQGKEPPSCQEAHGGEKYLHEDALKLGTYKIPEQLVESYAK------------------------------SAPTSGGKTLVAELLLLRALLKHSGTMALLVVPYVALALEKRDYLRDVWSPLQLNIQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLAALSAVVVDEMHLIGDRARGFLLELMLTKQRLLCPNNVQLICLSATLPNIECLAKWLDASLYRTAYRPVELRHFVCQGRAVYRPTRIRGTGGGAAGGDDEGTLEK--VVGGDIKRVGGTSPSADPDGVVDLVKDALARDMSVLVFCSTKKWCQQTATLLAKEVLSDRNRAA-------------------------------------------------------------------------------EGGKATERRRGASSPTTADDVREKLRQTPVGLDADLSYLVGTGIAFHHSGLVVEERSILEEAFRQGSIRVLVATSTLAAGVNLPAHRVIIRSPSVGIGLLDSTRYHQMAGRSGRAGVSRGEEGGKAVQGVDTARGESFLILPKNVKFTLSDASKLISAPLPKLESALRDAEGGGLERALLEVIVSMTVTSREGARRFSCKTLLAAQIPEDEVLKACDSAMAYLLKHNFVVQRGGDSVEGCADYDVAPTQLGRATFFSGLSPSAAVDVFESLDKACQNFAVASDLHALVLVTPLDGIEPNWGRFREEYLACSTDDPVRVVGELIGVELGVLVGAAGNTAPKYGQRSYEVSRGSNHHRMVDLQPYRRLYGAMLLQQAVEEVPVRNMAGRLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALLKAGYPSPLELATADASRVADVLLRCAPFRSAGWDESVERYRAKQASRLAQNVIHLASAEVMRQIHRRLASTTT 1531
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: UPI001BB0EC4D (DNA polymerase theta-like isoform X1 n=7 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0EC4D) HSP 1 Score: 447 bits (1151), Expect = 3.550e-123 Identity = 334/975 (34.26%), Postives = 486/975 (49.85%), Query Frame = 2
Query: 2903 DALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCP---------------HNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSD-ASSLISAPLPKLESALRGAKG----GGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILE---------GVLHKACDSAVEFLLKHNFVVKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPL--EGIEPNWERFREEYLACSKDDPVRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRS---VGWDESVERHRAKQARLL-AENIIRLASAEVVRQIRRQLANSVSAEKVT*FASEWGLAGSLAEDD 5722
D L L ++G+P+ +++ Y R GI +F WQ CL G L GGNLVY+APTS GKTLVAELL+L+ +L+ AL+++P+V++ EK Y + ++S + V + G G + ++A+CT+EKANS++NRL EEK + L VVVDE+H+IGD+ RG+LLEL+LTK R + + +Q++ +SATLPN++ LA WLDA LYRT +RPV L +V G+ V+ PS + K R V + G D D V L + +A+ VLVFC TK WC++ ++A+EI ++N S GFV+A ++ P + + V E+LR+TPV ++ + G+A+HH+GL +ER I+E AFRHG +++LVATSTL++GVNLPA RVIIRS ++D Y QM GR+GR +G+D G ES L+ K T D AS L+ + LP ++S L +G L+RA+LE++ S +S + + S TLLAA + E A S V FL ++ F+ ++ M + PTQLG+AT S LSP+ A+ VF L KA +NF + +ELH L VTP+ +G +P+W +F + S D R V L+G+E L+ A+ Y R ++ + + +RR Y ++LQ+ V EVP+ +AA+ G LQ+LQ+ AS F GMV FC L W L +L FQ RL + + EL LVR+S L RAR L +AGYP+ + T + V +L PFRS +++ E +Q R + A L AE R I + V AE G+AG D+
Sbjct: 500 DKLLLSSWGLPDVVLQQY-HRSGITSMFPWQVECLGT--GRVLEGGNLVYAAPTSAGKTLVAELLVLKKVLETK-KKALIILPFVSVTREKMFYLQSLFSEAGVRVDGFMGSHSPPGG-LASTDIALCTIEKANSLINRLLEEKSIDQLGIVVVDELHMIGDSHRGYLLELLLTKIRFVTATTLKTSGNSGGERQSNPIQIIGMSATLPNLDLLANWLDADLYRTDFRPVPLTEHVKIGKTVFDPS---------------MSKVREVKPPFEIKG------DEDQVFSLCFETVAKGNGVLVFCPTKNWCEKLCEMMAREIYRMHQG------------DVHTNQS------------GFVKASNML------------------------------------------------PLKLDHASLRDVMEQLRRTPVSINTVFRKTIPYGVAYHHAGLTFDERDIIEGAFRHGFLKILVATSTLSSGVNLPARRVIIRSIMFNRKVIDPLTYKQMIGRAGR-------------KGVDTEG-ESILVC----KTTERDKASKLMRSELPAVQSCLVKREGDDLSNSLKRAILEIIASGVASSPTEVQAYASSTLLAASLSEIRSKGQGSEVNTESAVLSCVRFLEENEFIRLQNVESEDGMVEKYCPTQLGKATLSSALSPNEALHVFAELQKARKNFVLENELHILYQVTPIYDQGFQPDWYQFVCTWEKMSSDQ--RRVAELVGVEESFLMRASQGL-VSYASRSANVQKSIAI----HRRFYTTLVLQELVNEVPLPTVAAKYNCGFGQLQSLQQSASTFAGMVTVFCSRLGWWNLELLLAQFQSRLNFGIQRELCDLVRISL-LNAQRARLLYDAGYPTVAAVATCDPDDVEMLLRNSVPFRSGRQAHGEDAFEAVERQQTRCIWATGRKGLTEAEAARLIVSEARAIVQAE--------LGVAGVAWSDE 1342
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A6P4YMI4_BRABE (DNA-directed DNA polymerase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YMI4_BRABE) HSP 1 Score: 445 bits (1144), Expect = 1.810e-122 Identity = 342/968 (35.33%), Postives = 482/968 (49.79%), Query Frame = 2
Query: 2900 EDALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCPHN----------VQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKG----GGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILEGVL-HKACDSAV----EFLLKHNFV---VKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFREEYLACSKDDP--VRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSVGWDESVERHRAKQAR----LLAENIIRLASAEVVRQIRRQLANSVSAEKVT*FASEWGLAGSLAED 5719
++ L L ++G+PE +++ Y R I LF WQA CL+ G L G NLVYSAPTS GKT+VAELL+L+ +L+ + ++P+V++A EK Y + + + V Y GG+ G V+VA+CT+EKANS+VNRL E+ + L VVVDE+H++GD+ RG+LLEL+LTK R + N VQ+V +SATLPN++ LA+WLDA LY+T +RPV L V G VY +EK R I G D D VV L + ++ SVLVFC TK WC++ A +A+E + NR V +K + G SK S L +V+ L+D V E+LR+TPVGLD L +V G+AFHH+GL +ER I+E AFR G +RVLVATSTL++GVNLPA RVIIR+P +LDS Y QMAGR+GR +G+D+ G ES L+ + + S A++LI + L + S L G ++RA+LE++ S A R+ S T+LAA + + + + DSA+ +FLL+H F+ + E PTQLG AT S LSP A+ VF L +A ++F + +ELH L VTP+ PN + + +YL + P +R V L+G+E G L A P + + L ++R Y A++LQ +EVP+ + + +G LQ+LQ+ A+ F GMV FC L WH L +L FQ RL + + EL+ LVR+S L RAR L AG+ + L AE V VL APF+S + + AK+ L AE RQI ++ V + +W S ED
Sbjct: 136 QNPLLLSSWGLPESVLQCYHDNR-ITQLFEWQAECLQT--GEVLAGRNLVYSAPTSAGKTMVAELLMLKRVLETQ-KKGIFILPFVSVAREKMFYLKKLLFDAGVKVDGYMGGQSPAGG-FSSVDVAVCTIEKANSLVNRLIEDGKTDQLGIVVVDELHMVGDSHRGYLLELLLTKIRYVTSKNRTDNKAATNPVQIVGMSATLPNLDLLARWLDAELYQTDFRPVPLTECVKVGTTVY---------------NSQMEKVRDFHSVINVRG------DEDQVVGLCYETVSDGHSVLVFCPTKNWCEKLAETIAREFY-NINR-------VPPEEKL-----TEGFSK--LSELPYVQLNRQVLQD--------------------------------------------------------VVEQLRRTPVGLDHMLGRVVPYGVAFHHAGLSFDERDIVEGAFRQGHLRVLVATSTLSSGVNLPARRVIIRTPLFHGRVLDSLTYKQMAGRAGR-------------KGVDSQG-ESVLVCKERER---SKATTLIRSGLSPVHSCLHRETGQDVSSSMKRAILEIIAGGVARSPADVERYASCTMLAAGMSDVTSDNTSTDSAIHACIQFLLEHEFIRLQEVQAEADTPSPSQEYQPTQLGSATLSSALSPDEALVVFADLQRAMKSFVLENELHILFQVTPIYTDWPNLDWY--QYLCLYEKLPTHMRRVAELVGVEEGYLARAVNGRVPVKTPK-------QLRQLAVHKRFYTALVLQDLTQEVPLPVVVKKYSCTKGVLQSLQQSAATFAGMVTVFCSRLGWHNLELLLAQFQSRLTFGVQRELVELVRISL-LNGLRARTLFNAGFHTVAMLAAAEVRDVEVVLRNAAPFKSGRKADDETEYEAKERETSRCFWVTGKAGLTEAEAARQIIQEAKELVQQDAAL-MGIDWQPPVSSEED 978
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A8K0EBF4_BRALA (POLQ protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EBF4_BRALA) HSP 1 Score: 443 bits (1140), Expect = 7.430e-122 Identity = 336/964 (34.85%), Postives = 487/964 (50.52%), Query Frame = 2
Query: 2900 EDALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRML----CPHN-----VQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKGG----GLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILEGVL---HKACDSAVEFLLKHNFV-VKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFREEYLACSKDDP--VRVVGRLIGIELGVLVSAA-GHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSVGWDESVERHRAKQAR----LLAENIIRLASAEVVRQIRRQLANSVSAEKVT*FASEWGLAGSLAED 5719
++ L L ++G+PE +++ Y R I LF WQA CLR G+ L G NLVYSAPTS GKT+VAELL+L+ +L+ + + ++P+V++A EK Y +++ + V Y GG+ G V+VA+CT+EKANS+VNRL E+ + L VVVDE+H++GD+ RG+LLEL+LTK R + C +N VQ+V +SATLPN++ LA+WLDA LY+T +RPV L V G +Y R +D S+ R D D VV L + ++ SVLVFC TK WC++ + +A+E + NR V K+ + G +K S L +V+ + L+D V E+LR+TPVGLD L +V G+AFHH+GL +ER I+E AFR G++RVLVATSTL++GVNLPA RVIIR+P +LDS Y QMAGR+GR +G+D+ G ES L+ + + S A++LI + L + S L G ++RA+LE++ S R+ S T+LAA + + + A + ++FLL+H F+ ++ S + E PTQLG AT S LSP A+ VF L +A ++F + +ELH L VTP+ N + + YL + P +R V L+G+E L A G K ++ ++ ++R Y A++LQ +EVP+ + + +G LQ+LQ+ A+ F GMV FC L WH L +L FQ RL + + EL+ LVR+S L RAR L AG+ + L AE V VL APF+S + + AK+ L AE RQI + V + +W S ED
Sbjct: 413 QNPLLLSSWGLPESVLQCYHDNR-ITHLFEWQAECLRT--GDVLAGKNLVYSAPTSAGKTMVAELLMLKRVLETH-KKGIFILPFVSVAREKMFYLKNLLFEAGVKVDGYMGGQSPAGG-FSSVDVAVCTIEKANSLVNRLIEDGKTDQLGIVVVDELHMVGDSHRGYLLELLLTKIRYVTSKTCSNNKETNPVQIVGMSATLPNLDLLARWLDAELYQTDFRPVPLTECVKVGSTMYNNEMKRV------RDFHSVINVR---------------GDEDQVVGLCYETVSEGHSVLVFCPTKNWCEKLSETIAREFY-NINR------VPPEEKR------TEGFTK--LSELPYVQLQRQVLQD--------------------------------------------------------VLEQLRRTPVGLDHMLGRVVPYGVAFHHAGLSFDERDIIEGAFRQGNLRVLVATSTLSSGVNLPARRVIIRTPLFHGKVLDSLTYKQMAGRAGR-------------KGVDSKG-ESVLVCKERER---SKATTLIRSGLSPVHSCLHRETGNDVSSSMKRAILEIIAGGVARSPTDVERYASCTMLAAGMTDVTTDNTNNAIHTCIQFLLEHEFIRLQEVQSEDDSPSQEYQPTQLGSATLASALSPDEALVVFADLQRAMKSFVLENELHILFQVTPIYNDWSNLDWYH--YLCLYEKLPTHMRRVAELVGVEESYLARAVRGRVPVKTPKQLRQLA--------VHKRFYTALVLQDLSQEVPLPVVVKKYSCTKGVLQSLQQSAATFAGMVTVFCNRLGWHNLELLLSQFQSRLTFGVQRELVELVRISL-LNGLRARTLFNAGFHTVAMLAAAEVRDVELVLRNAAPFKSGRKADDETEYEAKERETSRCFWVTGKAGLTEAEAARQIINEAKELVQQDAAL-MGIDWQPPVSTEED 1250
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: UPI00077A6539 (DNA polymerase theta-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6539) HSP 1 Score: 431 bits (1107), Expect = 7.040e-121 Identity = 342/965 (35.44%), Postives = 486/965 (50.36%), Query Frame = 2
Query: 2909 LKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGE---GGDGSDMEGVNVAICTMEKANSIVNRLAEEKR-LQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCPHN-------------VQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSK-KGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAK-GGGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILEGVLHKACDS------AVEFLLKHNFV-----------VKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFR-EEYLACSKDDP--VRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSV---GWDESVERHRAKQARLL----AENIIRLASAEVVRQIRRQLANSVSAE 5665
L+L ++G+P +++ Y + GI +F WQA CLR G L GGNLVYSAPTS GKT+VAELL+L+ +L+ AL ++P++++ EK Y + ++ + V + G GG GS V+VA+CT+EKANS++NRL EEK+ L +L VVVDEMH+IGD RG+LLEL LTK R + +Q+V +SATLPN++ LAKWL A LY T +RPV L + G ++ + +L K R + GG + D D V+ L K+ + SVLVFC TK WC++ A +A+ F S+ L++ + + K +GEG A+ L T V + KE V E+L++T VGLD+ LS LV +AFHH+GL +ER I+E AFR GS+RVLVATSTL++GVNLPA RVIIR+P L+D+ Y QMAGR+GR +G+DA G ES LI + +SL+++ L ++S L G + GG++RALLEV+ S VT R+ T A+ L+ +A D+ V FL+++ FV K G + + PTQLG AT S LSP A+ VF + KA + F + SELH + VTP+ I+ W +YL + P +R V L+GIE L A RF + + +RR + A+ LQ V EVP+ +A R G RG LQ+LQ A+ F GMV FC+ L W + +L FQ RL + + EL LVR+S L RAR L AGY + L +A + ++L APF S G + E +AR++ + + A+A+V+ +QL + A+
Sbjct: 241 LELSSWGLPPVVLKRYHEM-GITRMFDWQAECLRT--GKVLTGGNLVYSAPTSAGKTMVAELLMLKRVLETK-RKALFILPFISVTREKMFYLQRLYQEAGVRVDGFMGSHAPLGGVGS----VDVAVCTIEKANSLLNRLLEEKKALSSLGIVVVDEMHMIGDPHRGYLLELFLTKIRYISGFTGDTRNEDSDTSPAIQIVGMSATLPNLDMLAKWLSADLYFTDHRPVPLTEMIKIGSTLF---------------DGNLTKIREISGG-------TVAGDEDHVIPLCKETITEGHSVLVFCPTKNWCEKLAESIARH---------------------------------------FAEIGSLGLQE---------DRNGKDQGEGFVKASALITFDYVAL----KE-----------------VIEQLKRTQVGLDSVLSRLVPHAVAFHHAGLTFDERDIIEGAFRQGSVRVLVATSTLSSGVNLPARRVIIRTPIFHGKLVDALVYKQMAGRAGR-------------KGVDALG-ESVLICKPAER---QKVTSLLNSQLKAVKSCLLGKEDNGGIKRALLEVISSGVVTRPLDVERYAGCTFFASVPLQ---QEADDTDAVIKETVTFLVENEFVRLQKCDENTEDKKQEGVEGQLDEQRYVPTQLGMATLASALSPDEALVVFAEVQKARKCFVLESELHVIYQVTPIY-IQDQWPNIDWYQYLRIWERLPANMRRVADLVGIEEAFLARAVRG-------RFLTRTDQQRQSFAVHRRFFAALALQDLVREVPLNVVARRYGANRGMLQSLQGSAATFAGMVTVFCQKLGWTNMELLLSQFQSRLSFGVERELCDLVRISL-LNAGRARMLYNAGYHTVASLASAPHPDIENILHNAAPFVSGLKRGQETEAEVRERSEARVIWVAGRKGLTERAAAKVIINEAKQLLQADVAQ 1077
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: UPI0016014999 (LOW QUALITY PROTEIN: DNA polymerase theta-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016014999) HSP 1 Score: 438 bits (1126), Expect = 3.360e-120 Identity = 335/966 (34.68%), Postives = 480/966 (49.69%), Query Frame = 2
Query: 2900 EDALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCPHN---------VQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKG----GGLERALLEVVVSKTVTSKAGARRFCSRTLLAA---QILEGVLHKACDSAVEFLLKHNFVVK---SGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFREEYLACSKDDP--VRVVGRLIGIELGVLVSAA-GHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSVGWDESVERHRAKQAR----LLAENIIRLASAEVVRQIRRQLANSVSAEKVT*FASEWGLAGSLAED 5719
++ L L ++G+PE + + Y R I LF WQA CLR G+ L G NLVYSAPTS GKT+VAELL+L+ +L+ + + ++P+V++A EK Y + + + V Y GG+ G V+VA+CT+EKANS+VNRL E+ ++ L VVVDE+H++GD+ RG+LLEL+LTK R + VQ+V +SATLPN++ LA+WLDA LY+T +RPV L V G +Y ++K R I G D D VV L + ++ SVLVFC TK WC++ A +A+E + NR V K+ + G +K S L +V+ L+D V E+LR+TPVGLD L +V G+A+HH+GL +ER I+E AFR G++RVLVATSTL++GVNLPA RVIIR+P +LDS Y QMAGR+GR +G+D+ G ES L+ + + S A++LI + L + S L G ++RA+LE++ S R+ S T+LAA + A S ++FLL+H F+ G +Y+ PTQLG AT S L+P A+ VF L +A ++F + +ELH L VTP+ N + + YL + P +R V L+G+E G L A G K ++ ++ ++R Y A++LQ +EVP+ + + +G LQ+LQ+ A+ F GMV FC L WH L +L FQ RL + + EL+ LVR+S L RAR L AG+ + L AE V VL APF+S + + AK+ L AE RQI + V + +W S ED
Sbjct: 412 QNPLLLSSWGLPESVFQCYHDNR-ITQLFEWQAECLRT--GDVLAGKNLVYSAPTSAGKTMVAELLMLKRVLETH-KKGIFILPFVSVAREKMLYLKTLLFEAGVKVDGYMGGQSPAGG-FSSVDVAVCTIEKANSLVNRLIEDGKIDQLGIVVVDELHMVGDSHRGYLLELLLTKIRYVTSKTGTDNKETNPVQIVGMSATLPNLDLLARWLDAELYQTDFRPVPLTECVKVGSTMY---------------NNEMKKVRDFHSVINVRG------DEDQVVGLCYETVSEGHSVLVFCPTKNWCEKLAETIAREFY-NINR------VPPEEKR------TEGFTK--LSELPYVQLNRQVLQD--------------------------------------------------------VVEQLRRTPVGLDHMLGRVVPYGVAYHHAGLSFDERDIIEGAFRQGNLRVLVATSTLSSGVNLPARRVIIRTPMFHGKVLDSLVYKQMAGRAGR-------------KGVDSQG-ESVLVCKERER---SKATTLIRSGLSPVHSCLHRETGHDVSSSMKRAILEIIAGGVARSPTDVERYASCTMLAAGMSDVTTDNTDSAIHSCIQFLLEHEFIRLREIQAEDGSPTQEYQ--PTQLGSATLASALAPDEALVVFADLQRAMKSFVLENELHILFQVTPIYNDWSNLDWYH--YLCLYEKLPTHMRRVAELVGVEEGYLARAVRGRLPVKTPKQLRQLA--------VHKRFYTALVLQDLTQEVPLPVVVKKYSCTKGVLQSLQQSAATFAGMVTVFCSRLGWHNLELLLSQFQSRLTFGVQRELVELVRISL-LNGLRARTLFNAGFHTVAMLAAAEVRDVELVLRNAAPFKSGRKADDETEYEAKERETSRCFWVTGKAGLTEAEAARQIINEAKELVQQDAAL-MGIDWHPPVSSEED 1249
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A6P8IVB3_ACTTE (DNA-directed DNA polymerase n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IVB3_ACTTE) HSP 1 Score: 437 bits (1125), Expect = 4.260e-120 Identity = 332/932 (35.62%), Postives = 477/932 (51.18%), Query Frame = 2
Query: 2903 DALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTK----------------QRMLCPHNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSK-DGASP-LGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALR-GAKGGGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILE-GVLHKAC--DSAVEFLLKHNFV----VKSGGS-GKECMDYEL---APTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPLEGIEPNWERFR-EEYLACSKDDP--VRVVGRLIGI-ELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRS----VGWDESVERHRAKQARLL 5584
D L L ++G+P +++ Y GI +F WQA CLR GN L GGNLVYSAPTS GKT+VAELL+L+ +L+ AL ++PYV++A EK Y + ++ + V+ + G G V++A+CT+EKANS++NRL EE ++ L VVVDEMH++GD RG+LLEL LTK + + +Q+VC+SATLPN++ LA+WL A LY T YRPV L V G VY + K ++ A VV D D V+ L K+ ++ SVL+FC TK WC++ A +A+ +S GLSK DG +P GFVRA + D A KE V E+L++TPVGLD+ + ++ +A+HH+GL V+ER I+E AFR G+IRVLVATSTL +GVNLPA RVIIR+P+ ++D Y QMAGR+GR +G+D G ES L+ + A++L+ + L ++S L K GGL+RALLEV+ S VT R+ T A+ E V C + FL+ + F+ VK S G+E ++ + PTQLG AT S LSP A+ VF L KA + F + SELH + VTP+ +E W ++L+ + P +R V ++GI E+ + +++ G R + + L+ +RR + A+ LQ V+EVP+ +A R G RG +Q+LQ AS F GMV FC+ L W L +L FQ RL + + EL LVR+S L RAR + AG+ + L +A+ + ++ PF S +G + RHR ++AR++
Sbjct: 322 DVLSLSSWGLPPSVLQRYHDM-GITHMFEWQAECLRT--GNVLRGGNLVYSAPTSAGKTMVAELLMLKRVLETK-RKALFILPYVSVAREKMFYLQRLFQEASVRVEGFMGSHNPAGG-FAAVDIAVCTIEKANSLLNRLLEENKVSTLGVVVVDEMHMLGDPHRGYLLELFLTKILFIGGQGKVKDGQNNEEKVTETAIQIVCMSATLPNLDMLARWLKADLYFTAYRPVPLTEMVKVGPTVYDNTM---------KKIRDIDPAAVVA------------HDDDHVIPLCKETISGGHSVLIFCPTKNWCEKQAEAIARH---------------------FSTIGHLGLSKNDGKTPKCGFVRASDLIAFDVEAI---------------------------------KE-----------------VLEQLKRTPVGLDSVMRRIIPYSVAYHHAGLTVDERDIIEGAFRQGTIRVLVATSTLCSGVNLPARRVIIRTPTFHGKMVDPLVYKQMAGRAGR-------------KGVDDRG-ESILVCKATERHK---ATTLMKSELKAVKSCLLLKEKNGGLKRALLEVIASGVVTRLRDVERYAGCTFFASSSSETDVTGSKCAITETISFLVDNEFIRVQSVKEKRSDGEEEVEESIDRYVPTQLGTATVASALSPDEALVVFAELQKARKCFVLESELHIIYQVTPIY-VEAQWPDIDWSQFLSIWERLPSHMRRVADIVGIKEVYLALASRG--------RIPTSTPQQRQQLRVHRRFFAALALQDLVQEVPLNFVARRYGATRGMIQSLQGSASTFAGMVTVFCQRLGWQNLDLLLSQFQSRLSFGVERELCDLVRISV-LNAARARIVYNAGFQTIASLASAKVEDIESIMSNAVPFISGRKHMGETDLEVRHR-REARVI 1128
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A7M7PEQ8_STRPU (DNA-directed DNA polymerase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PEQ8_STRPU) HSP 1 Score: 437 bits (1125), Expect = 4.900e-120 Identity = 334/964 (34.65%), Postives = 486/964 (50.41%), Query Frame = 2
Query: 2903 DALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCP--------------HNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIK-KVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSD-ASSLISAPLPKLESALRGAKG----GGLERALLEVVVSKTVTSKAGARRFCSRTLLAAQILE--------GV-LHKACDSAVEFLLKHNFV----VKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPL--EGIEPNWERFREEYLACSKDDPVRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQP----YRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRS---VGWDESVERHRAKQARLL-AENIIRLASAEVVRQIRRQLANSVSAE 5665
D L L ++G+P+ +++ Y R GI +F WQ CL G L GGNLVY+APTS GKTLVAELL+L+ +L+ AL+++P+V++ EK Y + ++S + V + G G + ++AICT+EKANS++NRL EEK + L VVVDE+H+IGD+ RG+LLEL+LTK R + + +Q+V +SATLPN++ LA+WLDA LYRT +RPV L +V G+AV+ + S+ K R V + KV D D V L + +++ VLVFC TK WC++ ++A+EI Y+ + GFV+A ++ P + + V E+LR+TPV +++ L + G+ +HH+GL +ER I+E AFRHG +++LVATSTL++GVNLPA RVIIRS ++D Y QM GR+GR +GID G ES L+ K T D AS L+ A LP ++S L ++G L+RA+LE++ S +S + + S TLLAA + E GV A S V+FL ++ F+ V+ G E + PTQLG+AT S LSP A+ VF L KA +NF + +ELH L VTP+ +G +P+W +F + S D R V L+G+E L+ A+ + S R+ ++Q +RR Y ++L + V EVP+ +AA+ G LQ+LQ+ AS F GMV FC L W L +L F++RL + + EL LVR+S L RAR L +AGYP+ + T V +L PF+S +++ E KQ R + A L AE + I + V E
Sbjct: 530 DQLLLSSWGLPDVVLQQY-HRAGITKMFPWQVECLGA--GRVLEGGNLVYAAPTSAGKTLVAELLVLKKILETK-KKALIILPFVSVTREKMFYLQSMFSEAGVRVDGFMGSHSPPGG-LASTDIAICTIEKANSLINRLLEEKTIGQLGIVVVDELHMIGDSHRGYLLELLLTKIRYVTATTLKSPGDVSPSLSNPIQIVGMSATLPNLDLLARWLDADLYRTDFRPVPLTEHVKIGKAVF---------------DSSMSKVREVKPPFEVKV-------DEDQVFSLCLETISKGNGVLVFCPTKNWCEKLCEMMAREI--------------------YNMHQGQVTTNQ----TGFVKASNML------------------------------------------------PLKLDHASLRDVVEQLRRTPVSINSVLRKTIPCGVGYHHAGLTFDERDIIEGAFRHGFLKILVATSTLSSGVNLPARRVIIRSIMFNRKVIDPLTYKQMIGRAGR-------------KGIDTEG-ESILVC----KTTERDKASKLMRAELPPVQSCLIKSQGDDLSNSLKRAILEIIASGVASSPTEVQAYASSTLLAASLSEVKTDDQGSGVNTGSAVLSCVKFLEENEFIRLQNVECEGETTE----KYCPTQLGKATLSSALSPGEALQVFAELQKARKNFVLENELHILYQVTPIYNQGFQPDWYQFVCTWEKMSSDQ--RRVAELVGVEESFLMRAS---------QGLVSSASRSANVQKSIAIHRRFYTTLILHELVNEVPLPTVAAKYSCGFGQLQSLQQSASTFSGMVTVFCSRLGWWNLELLLAQFKNRLNFGIQRELCDLVRISL-LNAQRARLLYDAGYPTVAAVATCNPDDVETLLRNSVPFKSGRQAHGEDAYEAVERKQTRCIWATGRKGLTEAEAAKLIVSEARQIVQVE 1360
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A6I9N0I4_9TELE (DNA polymerase theta-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9N0I4_9TELE) HSP 1 Score: 420 bits (1080), Expect = 5.750e-120 Identity = 318/969 (32.82%), Postives = 474/969 (48.92%), Query Frame = 2
Query: 2903 DALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCP---------HNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADTVRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKGGGLE----RALLEVVVSKTVTSKAGARRFCSRTLLAAQI--------LEGVLHKACDSAVEFLLKHNFVVKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPL--EGIEPNWERF--REEYLACSKDDPVRVVGRLIGIELGVLVSAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSVGWDESVERHRAKQARLLAENIIRLASAEVVRQIRRQLANSVSAEKVT*FASEWGLAGSLAEDDSVSA 5734
+ L L ++G+P+ ++E Y K G+ +F WQA CL V G L GGNLVYSAPTS GKTLVAELL+L+ +L+ AL ++P+V++A EK Y + V+ + V+ Y G G + ++VA+CT+EKANS+VNRL EE + L VVVDE+H++GD+ RG+LLEL+LTK R + VQ++ +SATLPN+ LA WL A LY+T YRPV L + G +Y S +S+ + IK D D +V L + + SVL+FC +K WC++ A+ +A+E RN +GE P A +L V V +LR+TP GLD L V G+AFHH+GL +ER +LE AFR ++RVL ATSTL++GVNLPA RVIIRSP+ +LD Y QMAGR+GR +G+D G ES L+ + + +L++ L + S L +G G+ RA+LE++V ++ R + +LLAA I E A +++VE+L+++ F+ KE + PTQLG AT S LSP A+ +F L +A + F + ++LH L L+TPL E +W +F E L+ S ++ V L+GI+ G L + TG + + + + ++R + ++L V EVP+ +A++ RG LQ+LQ+ AS + GMV FC+ L WH + +L FQ RL + + EL+ LVR+S L RARA+ G + EL A A V L PF+S RA++ R +N++ + + + + ++ + + +V AG ED ++A
Sbjct: 280 EKLLLCSWGLPKPVLERYQKH-GVTHMFEWQAQCLTV--GQVLQGGNLVYSAPTSAGKTLVAELLMLKRVLETK-RKALFILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTSAAGGFSK-LDVAVCTIEKANSLVNRLIEEDNMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYISQKQNTTGSLSEGVQIIGMSATLPNLSLLAGWLGAELYQTDYRPVPLLEHFKVGCNIYDKS-------------LSVVRKFTPLPHIK--------GDDDHIVSLCYETVREGRSVLLFCPSKNWCEKLADSIAREFYNLRNAGG-------------------------------------------------------QGEAEPQAVRLDRDGLVDVV------------------------AQLRRTPAGLDPILQRTVPWGVAFHHAGLTFDERDVLEGAFRQCTVRVLAATSTLSSGVNLPARRVIIRSPTFNGHMLDPLTYKQMAGRAGR-------------KGVDTIG-ESVLVCKEIER---QKGITLLTGTLQPISSCLVRREGEGVTTSMLRAILEIIVGGVASTPQDVRSYALCSLLAASIKCDGKKESTEDTNKGAIEASVEWLMENEFI----SIQKEGQEERYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYAEWTTIDWYQFFCLWEQLSSS----MKRVAELVGIQEGFLARSV--TGKLVAK-----TEKQRRQMAIHKRFFTTIVLHDLVNEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQFQTRLSFGVQRELVDLVRVSL-LNATRARAVYAQGLCTVAELARATVADVEKALRNAIPFKSF---------RAEEQRQTGKNVLFIWACRCISKEKKPIGRYIGRVEVN-------PAGPHCEDIEINA 1094
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Match: A0A672JB02_SALFA (DNA-directed DNA polymerase n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JB02_SALFA) HSP 1 Score: 436 bits (1120), Expect = 1.070e-119 Identity = 317/924 (34.31%), Postives = 464/924 (50.22%), Query Frame = 2
Query: 2903 DALKLRTYGIPEQLVESYAKRRGIRGLFRWQAHCLRVDDGNPLGGGNLVYSAPTSGGKTLVAELLLLRALLKHNGTMALLVVPYVALALEKRDYFRDVWSPLQLNVQAYHGGEGGDGSDMEGVNVAICTMEKANSIVNRLAEEKRLQALSAVVVDEMHLIGDTARGFLLELMLTKQRMLCP---------HNVQLVCLSATLPNIECLAKWLDASLYRTQYRPVELRHYVCKGRAVYRPSRIRGTGAQQGKDEMSLEKARVVGGGIKKVGGTSPISDPDGVVDLVKDALARDMSVLVFCSTKKWCQQTANLLAKEILLDRNRAAAMASVVAAAKKCYSNSSSPGLSKDGASPLGFVRAKSIALEDAGAAAAKSTELHSKKGEGMPSAAQLGTGATVTVTPAGKEGSKAERPRPVCPTTADT--VRERLRQTPVGLDAELSYLVGAGIAFHHSGLVVEERSILEDAFRHGSIRVLVATSTLAAGVNLPAHRVIIRSPSIGIGLLDSTRYHQMAGRSGRAGVCRGNEGGEAAQGIDAAGGESFLILPKNVKFTLSDASSLISAPLPKLESALRGAKGGGLE----RALLEVVVSKTVTSKAGARRFCSRTLLAAQILEGVLHK--------ACDSAVEFLLKHNFV-VKSGGSGKECMDYELAPTQLGRATFFSGLSPSAAVDVFLSLDKACQNFAVASELHALVLVTPL--EGIEPNWERF--REEYLACSKDDPVRVVGRLIGIELGVLV-SAAGHTGPKYGRRFYDISRGRTVDLQPYRRLYGAMLLQQAVEEVPVRNMAARLGIERGALQALQKEASVFCGMVVCFCRHLQWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPFRARALREAGYPSPKELVTAEAARVADVLLRCAPFRSV--GWDESVERHRAKQARL 5581
+ L+L ++G+P+ ++E Y K G+ +F WQA CL V G L GGNLVYSAPTS GKTLV+ELL+L+ +L+ AL ++P+V++A EK Y + ++ + V+ Y G G ++VA+CT+EKANS++NRL EE + L VVVDE+H+IGD+ RG+LLEL+LTK R + VQ+V +SATLPN+ LA WL A LY+T YRPV L ++ GR +Y + SL R + G D D +V L + ++ SVL+FC +K WC++ A+ +A+E + + GE P +PVC + V +LR+TP GLD L V G+AFHH+GL +ER +LE AFR G+IRVL ATSTL++GVNLPA RVIIR+P+ LLD Y QMAGR+GR +G+D G ES L+ + + SL++ L + S L +G G+ RA+LE++V +S R + S +LLAA + +K A ++ VE+L+++ F+ ++ G+G PTQLG AT S LSP A+ +F L +A + F + ++LH L L+TPL E +W +F E L+ S ++ V L+G++ G L S G K ++ ++ ++R + ++LQ V+EVP+ +A++ RG LQ+LQ+ AS + GMV FC+ L WH + +L +Q RL + + EL+ LVR+S L RARAL G + EL A V L PF+S DES E A++ RL
Sbjct: 45 EKLRLSSWGLPKPVLECYQKH-GVTQMFEWQAQCLAV--GQVLNGGNLVYSAPTSAGKTLVSELLMLKRVLETK-RKALFILPFVSVAKEKMHYLQSIFEEAGVRVEGYMGSTSAAGG-FAALDVAVCTIEKANSLINRLIEEDSMSLLGMVVVDELHMIGDSGRGYLLELLLTKIRYITQKQNTSGSLSEGVQVVGMSATLPNLSLLASWLGAELYQTDYRPVPLHEHLKVGRNIY---------------DKSLSVVRQFTPALSVKG------DDDHIVSLCYETVSEGRSVLLFCPSKNWCEKLADTIAREF------------------------------------------------------------YHRDGEAEP--------------------------QPVCLQQEELLDVVAQLRRTPAGLDPILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGAIRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGR-------------KGVDTTG-ESVLVCKEVER---QKGISLLNGTLQPISSCLVKREGEGVTTSMLRAILEIIVGGVASSPQDVRLYASCSLLAASMKHESKNKSNEESNKGAIEACVEWLMENEFISIQKDGAGNSTTGMRYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLYAEWTTIDWYQFFCLWEQLSSS----MKRVAELVGVQEGFLARSVNGKLVAKTEKQHRQMAI--------HKRFFTTLVLQDLVKEVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQRELVDLVRVSL-LNATRARALYAQGLCTVAELARAAVTDVEKALRNAVPFKSSKRAVDES-EMEAAERRRL 825 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig856.8.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig856.8.11 >prot_P-littoralis_Contig856.8.11 ID=prot_P-littoralis_Contig856.8.11|Name=mRNA_P-littoralis_Contig856.8.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1867bp MKRTYPAIKFVRPRSTSSGKPAASTGSEKYPPPLPPEKATVHPASAKRKRback to top mRNA from alignment at P-littoralis_Contig856:92079..108648- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig856.8.11 ID=mRNA_P-littoralis_Contig856.8.11|Name=mRNA_P-littoralis_Contig856.8.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=16570bp|location=Sequence derived from alignment at P-littoralis_Contig856:92079..108648- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig856:92079..108648- >mRNA_P-littoralis_Contig856.8.11 ID=mRNA_P-littoralis_Contig856.8.11|Name=mRNA_P-littoralis_Contig856.8.11|organism=Pylaiella littoralis U1_48|type=CDS|length=5601bp|location=Sequence derived from alignment at P-littoralis_Contig856:92079..108648- (Pylaiella littoralis U1_48)back to top |