mRNA_P-littoralis_Contig855.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: D7FXY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY6_ECTSI) HSP 1 Score: 498 bits (1281), Expect = 1.050e-149 Identity = 417/787 (52.99%), Postives = 475/787 (60.36%), Query Frame = 1
Query: 1 LNSVAALPGKSVAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFGLRPKSDGQGGGDRPSGGGEAGRGFGKAGGVGGGSPKHSSKTETRSRHDMTIFVSVYRRRAQEEFEQSVKGGFERILPPSQTAPNARASYGKVLRLAERVFASLSTCHSPIHSPRSTSPPLSPNRGGKGGNLTPPSVVSPRSAEAPPQTHPPAASPRVTFSLQ-PRRSSSGSDLNPSAGVSVAFERSEDVXXXXXXXXXXXDAPPA-GPNRK-EGGLDSSPVAAETRDAAGPYVSVGRAASTAAXXXXXXXXXXXXXXXXXXXXXXVVGAAGEREEFTTGNETDQDCGGNGVNGRNNGDIVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDWEXXXXXXXXXXXXXXXXXXXXXXXXXAEVDDRGFDHFGEGGRGKTWHHG-AGEEVVAYPGEGRESR-AGRYHDRKESMVDLGGPQQYLQQXXXXXXXRW--RPWGEVESLEFQQS-YNQSVLWPTARDRAPIAVDQRFAGGYACRGMGGILPVNHSTVS-RGQGAAAE---GLPSGCGLR 2325
L+SVAAL GKSVAQRYL+NP+LIDGYKFDLRLYVLVTSV+PMRIFLF DGLVRICTEAYEAP ESNINKTTMHLTNYSVNK S NFTSDDMGE GFKRSVKWFKKWLDEQGHDSAALWARLADACVKT +TVGPMLRREYN ANP PGGFA+ XXXXXXXXXXXX RS CFTIVG+DLM+DDEL+PWIIEINHLPSFRTETGMDYRIKK+LVFNTLSLLDVRVG REEWQ E+E +KRIRLFGL PK GQ P GGGE SPK+SSK + RSR + V RA+EEFEQ+VKGGFERI PPS+T+P+ RASY K A + H RS SPP SP+RG + G+ P S + + +P Q+ +A PR + + + P S + D + G S + +S DA GP R+ E S+ AA + A G +S G R EF G+ +D GG +GD + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RDWE A ++ + + G GG G+ + G G E P G + R GR+ D +ESMVDL GP Q L QXXXXXXX R W E+LEFQQS Y +S WPT GY RGMG I+ N+ + RG G AA G P GCGLR
Sbjct: 733 LSSVAALQGKSVAQRYLTNPLLIDGYKFDLRLYVLVTSVNPMRIFLFEDGLVRICTEAYEAPAESNINKTTMHLTNYSVNKTSSNFTSDDMGESGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTFLTVGPMLRREYNAANPPPGGFASXX-------------XXXXXXXXXXXXXXRSTCFTIVGVDLMVDDELDPWIIEINHLPSFRTETGMDYRIKKQLVFNTLSLLDVRVGEREEWQTEMERVKRIRLFGLPPKDGGQSPVSGPGGGGEXXXXXXXI------SPKNSSKKKNRSR----LAVG----RAREEFEQAVKGGFERIFPPSETSPDPRASYTKP---ASGWMHQMDEIHGGAVF-RSASPPPSPSRGNRPGSEQPRSSLV-GAKNSPEQSAQHSAPPRASLATESPPVSRATVDHSDGRGESGSGRKSSGALPGAIPPPVVIDATATTGPGREAEIKAGSTAPAAGAAEEACSQDGDGEDSSPPPRTDSVPGGDGGSRGGGDLPE----GRKQRRVEFVEGDTSDHGSGGFA-----SGDATSPSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-CRDWEKEAKRRKKLFKKAARLAAEAAA---AAIEGKAIMNSGVGGEGRENNGGHLGGEETGTPTAGCDERWGGRHQDGRESMVDLEGPHQDLHQXXXXXXXXXQSRQWSATENLEFQQSVYTRSAGWPTT--------------GY--RGMGSIVRTNNEPGAWRGTGGAAGTMGGFPVGCGLR 1458
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A6H5JML2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML2_9PHAE) HSP 1 Score: 337 bits (864), Expect = 1.160e-95 Identity = 171/216 (79.17%), Postives = 181/216 (83.80%), Query Frame = 1
Query: 1 LNSVAALPGKSVAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFA---ATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFR 639
L+SVAAL GKSVAQRYL+NP+LIDGYKFDLRLYVLVTSV+PMRIFLF DGLVRICTEAYEAPTE NINKTTMHLTNYSVNK S NFTSDDMGE GFKRSVKWFKKWLDEQGHDSAALWARLADACVKT +TVGPMLRREYN ANPTP GFA A+KGK + PPRS CFTIVG+DLM+DDEL+PWIIEINHLPSFR
Sbjct: 739 LSSVAALQGKSVAQRYLTNPLLIDGYKFDLRLYVLVTSVNPMRIFLFEDGLVRICTEAYEAPTEININKTTMHLTNYSVNKTSSNFTSDDMGESGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTFLTVGPMLRREYNAANPTPRGFASVAASKGKAA----------------TPTPPPPRSNCFTIVGVDLMVDDELDPWIIEINHLPSFR 938
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A8C1HMB6_CYPCA (Tubulin tyrosine ligase-like family, member 7 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1HMB6_CYPCA) HSP 1 Score: 194 bits (492), Expect = 5.780e-51 Identity = 103/251 (41.04%), Postives = 144/251 (57.37%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAR--EEWQKEIETLKRIRLFGLR 780
+ Q YL P L++GYKFDLR Y+LVTS P+R+FL+NDGLVR+ TE Y P ESN+N+ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ NTL LL++R A EW + L + RL +R
Sbjct: 70 IVQEYLDKPFLMEGYKFDLRFYILVTSCDPLRVFLYNDGLVRMGTEKYHTPNESNLNQLYMHLTNYSVNKHNENFERDETVDKGSKRSIGWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSA---------------------SICFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNTLKLLNIRYEAMLSPEWYFQRAKLDKERLAQVR 290
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A8C1DDL7_CYPCA (Tubulin tyrosine ligase-like family, member 7 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DDL7_CYPCA) HSP 1 Score: 194 bits (492), Expect = 1.980e-50 Identity = 103/251 (41.04%), Postives = 144/251 (57.37%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAR--EEWQKEIETLKRIRLFGLR 780
+ Q YL P L++GYKFDLR Y+LVTS P+R+FL+NDGLVR+ TE Y P ESN+N+ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ NTL LL++R A EW + L + RL +R
Sbjct: 117 IVQEYLDKPFLMEGYKFDLRFYILVTSCDPLRVFLYNDGLVRMGTEKYHTPNESNLNQLYMHLTNYSVNKHNENFERDETVDKGSKRSIGWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSA---------------------SICFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNTLKLLNIRYEAMLSPEWYFQRAKLDKERLAQVR 337
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A421F1Y5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F1Y5_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.660e-50 Identity = 106/266 (39.85%), Postives = 155/266 (58.27%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFT---SDDMGEGGFKRSVKWFKKWLDEQGHDSA--ALWARLADACVKTLITVGPMLRREYNMA--------------NPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
VAQ+Y++ P+LIDG KFDLR+YVL+TS P+R+++F DGLVR+CT Y AP N+ + MHLTNY+VNK S NF DD G KRSV+WF WL E D ALW R+ D C+K +++V P L +EY NP PG + G S G PP S CF+++GMD+++D++L+PW++E+NHLPSF ++ +D+ +K+ L+ T LL++ ++ +Q + + RL+G
Sbjct: 162 VAQQYVARPLLIDGKKFDLRIYVLITSCSPLRVYIFKDGLVRMCTADYVAPNADNLEQRFMHLTNYAVNKHSNNFEVHKGDDADGKGSKRSVRWFFSWLREIYPDEQVDALWERIGDICLKAILSVQPTLAQEYRSTFAKYLRRNEAGGGKNPRPG--SVNDGVDSDGDSMSDVGGDSNSSASTPSSPP-SCCFSLLGMDVLVDEQLKPWLLEVNHLPSFGCDSPLDWSVKEPLISQTFDLLNLSPNDKDNYQADQARALQRRLYG 424
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A7N6ANU5_ANATE (Tubulin tyrosine ligase-like family, member 7 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7N6ANU5_ANATE) HSP 1 Score: 192 bits (487), Expect = 3.440e-49 Identity = 98/247 (39.68%), Postives = 145/247 (58.70%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
+ Q YL P L++GYKFDLR+Y+LVTS P+RIFL+NDGLVR+ TE Y AP+E+N+++ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ N L LL++R ++ + + + RL+G
Sbjct: 127 IVQEYLDKPFLMEGYKFDLRIYILVTSCDPLRIFLYNDGLVRMGTEKYHAPSEANLSQLYMHLTNYSVNKHNENFERDETVDKGSKRSISWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSD---------------------SVCFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNALKLLNIRASDKKRNLAQQKAEAQRRLYG 343
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A8C1EL33_CYPCA (Tubulin tyrosine ligase-like family, member 7 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EL33_CYPCA) HSP 1 Score: 192 bits (487), Expect = 4.830e-49 Identity = 99/247 (40.08%), Postives = 141/247 (57.09%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
+ Q YL P L++GYKFDLR Y+LVTS P+R+FL+NDGLVR+ TE Y P ESN+N+ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ NTL LL++R + + + RL+G
Sbjct: 167 IVQEYLDKPFLMEGYKFDLRFYILVTSCDPLRVFLYNDGLVRMGTEKYHMPNESNLNQLYMHLTNYSVNKHNENFERDETVDKGSKRSIGWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSA---------------------SVCFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNTLKLLNIRASDKRRNLARQKAEAQRRLYG 383
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A674N1X4_TAKRU (Uncharacterized protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A674N1X4_TAKRU) HSP 1 Score: 192 bits (488), Expect = 5.190e-49 Identity = 98/247 (39.68%), Postives = 144/247 (58.30%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
+ Q YL P L++GYKFDLR+Y+LVTS P+RIFL+ DGLVR+ TE Y APTE+N+++ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ N L LL++R ++ + + + RL+G
Sbjct: 132 IVQEYLDKPFLMEGYKFDLRVYILVTSCDPLRIFLYKDGLVRMGTEKYHAPTEANLSQLYMHLTNYSVNKHNENFERDETVDKGSKRSISWFTEFLRSNDYDVAKFWGDISELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSD---------------------SVCFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYNVKKGVLLNALKLLNIRASDKKRNLAQQKAEAQRRLYG 348
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A667ZQ75_9TELE (Tubulin tyrosine ligase like 7 n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZQ75_9TELE) HSP 1 Score: 191 bits (485), Expect = 7.400e-49 Identity = 98/247 (39.68%), Postives = 145/247 (58.70%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
+ Q YL P L++GYKFDLR+Y+LVTS P+RIFL+NDGLVR+ TE Y AP+E+N+++ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ N L LL++R ++ + + + RL+G
Sbjct: 187 IVQEYLDKPFLMEGYKFDLRIYILVTSCDPLRIFLYNDGLVRMGTEKYHAPSEANLSQLYMHLTNYSVNKHNENFERDETVDKGSKRSIGWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSD---------------------SVCFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNALKLLNIRASDKKRNLAQQKAEAQRRLYG 403
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Match: A0A671YSK8_SPAAU (Tubulin tyrosine ligase like 7 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A671YSK8_SPAAU) HSP 1 Score: 192 bits (487), Expect = 1.190e-48 Identity = 98/247 (39.68%), Postives = 145/247 (58.70%), Query Frame = 1
Query: 34 VAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGLVRICTEAYEAPTESNINKTTMHLTNYSVNKASRNFTSDDMGEGGFKRSVKWFKKWLDEQGHDSAALWARLADACVKTLITVGPMLRREYNMANPTPGGFAATKGKPSGGGXXXXXXXXXXXXXXXXXXPPRSKCFTIVGMDLMIDDELEPWIIEINHLPSFRTETGMDYRIKKELVFNTLSLLDVRVGAREEWQKEIETLKRIRLFG 774
+ Q YL P L++GYKFDLR+Y+LVTS P+RIFL+NDGLVR+ TE Y AP+E+N+++ MHLTNYSVNK + NF D+ + G KRS+ WF ++L +D A W +++ VKTLI P + Y M P G+P G S CF ++G D+++D +L+PW++EIN PSF T+ +DY +KK ++ N L LL++R ++ + + + RL+G
Sbjct: 146 IVQEYLDKPFLMEGYKFDLRIYILVTSCDPLRIFLYNDGLVRMGTEKYHAPSEANLSQLYMHLTNYSVNKHNENFERDETVDKGSKRSISWFTEFLRTNDYDVAKFWGDVSELVVKTLIVAEPHVLHAYRMCRP---------GQPPGSD---------------------SVCFEVLGFDIILDRKLKPWLLEINRAPSFGTDQKIDYDVKKGVLLNALKLLNIRASDKKRNLAQQKAEAQRRLYG 362 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig855.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig855.7.1 >prot_P-littoralis_Contig855.7.1 ID=prot_P-littoralis_Contig855.7.1|Name=mRNA_P-littoralis_Contig855.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1183bp LNSVAALPGKSVAQRYLSNPMLIDGYKFDLRLYVLVTSVHPMRIFLFNDGback to top mRNA from alignment at P-littoralis_Contig855:23089..33809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig855.7.1 ID=mRNA_P-littoralis_Contig855.7.1|Name=mRNA_P-littoralis_Contig855.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10721bp|location=Sequence derived from alignment at P-littoralis_Contig855:23089..33809+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig855:23089..33809+ >mRNA_P-littoralis_Contig855.7.1 ID=mRNA_P-littoralis_Contig855.7.1|Name=mRNA_P-littoralis_Contig855.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3549bp|location=Sequence derived from alignment at P-littoralis_Contig855:23089..33809+ (Pylaiella littoralis U1_48)back to top |