mRNA_P-littoralis_Contig854.13.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI) HSP 1 Score: 983 bits (2541), Expect = 0.000e+0 Identity = 780/1292 (60.37%), Postives = 829/1292 (64.16%), Query Frame = 2
Query: 287 VLQLKQGGHGVGASSSAVDGGGVRFVASAESVSSQAEITLDSMSSHIARIESAIRAHILDHEEDFLGSVGGVSELSRRTEEFRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLRSQEEVLGLDAAAVXXXXXXXXXXXXXXXXXXXXXXXXVVAVAGGAADLRELAKAAQSLQELEGTLRDPEVSELDVVGRERAYVEACGAAVRRMSADSLARGMKALNQTDIGGALQVFFNLECLPARVRACVVHLADEAEDAVSEALQPRALADALSSXXXXXXXXXXXXXXXXXAEHRPKSPTRXXXXXXXXXXXXXXXXXXXXXXXXSAR----------MRAHAGKLAAALYGTSMEAWGLQRVLDKKRDPTTRALLDATVRADRSGGG-GGLSLSAGAYRAYWDGLCRVIRAVVERALEADGVGRGSGGGXXXXXXXXXXEYGVGGSG----AALVAMYPFLRSSFLRLIKRLEEGTARHQGSSAVRRSDGGXXXXXXXXXXXXXXXAL----LWSKAGVNTAGSSTGSGQQPGGRGGVLGGSRWLSLALEID-DDLSLDSSXXXXXXXXXXXXXRRGGGAEAGAGPTSNGGAAYGRRGFGLRGSSGAAGTNAGDGDR-------SDSVRLLEALAPLRDLFLARSLERLTTPVEQMFPQFDGYMATVPSKHDLASFVRSIHAELALAVPAGSI-TARQGGGLAPSSEAEXXXXXXXXXXXEADLSLLPILMKGVVQAVRLFCAKVEAMQSVEQGAYAFGGXXXXXXXXXXPDDDMTSGGDMSGMSTAGG----ASIEAWAPTAEQKHNLQLLELVVKLREALLGIPALVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPD------------------ELSSPHVFRGMSEQAYVTWLLGGGAAHEGKAREKGADXXXXXXXXXXXXXXXXXXXXDSVTHGGSAATYTERSTLSPDTSYMAEFGAWGVVQSCLDEYHQRRSVSVGVDVGDGXG-KKKRASMASSLPRAVALLPEAGPALLSGYETRG 4009
+ +L+QGG G+G SS+ G ASAESVSSQAEITLDSMSSHIARIE+AIR+HILD+EEDFLGSVGGVSELSRRTEEFRDG +RLR QE+VLGL+AA XXXXXXXXXXXX XXXXXXXXXX AADLRELAKAAQSLQELE TLRDPEV+EL+VV RERAYVEACGAAVRRMSADSLARGMK+LNQTDIGGALQVFFNLECLPARV+ACV HLA EA++A SEALQP ALADA S XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX + R MRAHAGKLAAAL+GTSMEAWGLQRVLDKKRDPTTR LLDATVRADRS GG GGLSL AGAYRAYWDGLCR +R VERALEADG VGG ALVAMYPFLR +FLRLI RLEE TA XXXXXXXXXXXXXXX W + G GQQ GG+LGGSRWL+LALE D ++LSLD S R GAEAGAGP S GRR GLRG SD RLLEAL PLRDLFLARSLERLTTPVEQMFPQFDGYMA VPSKHDLASF RSIHAEL+LAVPAGS+ +A G XXXXXXXXX EAD SLLPIL+KGVVQA RLFC KVEAMQSVE+GAY FGG XXX A +EAWAPT EQ+HNLQLLELVVKLREALLGIPALV P A G ECRERVA+ V+ LD+ A+ VFLEPYLSGVARA SKMHRENFGPG S XXXXXX SLFL ELQ ALAALQADHF RIAALRTP AEA LRSLA R+LRAYV+HCALIRPLSE GKAR+AQDMATLEIALSPLARVSELGAVY E RAFRTLLFVDD +DE D N+Q RGRDSR F + T V Y AP+ E + H RGMS+QAYVTWLLGGGAA E XXXXXXXXXXXXXXXXXXX GG A YTERSTLSPDTSYMAE GAW VVQ+CLDEYHQRRSV+V G+ G A LPRAV LLPEAGPALLS YE RG
Sbjct: 32 ITKLQQGGDGLGNSSN-----GXXXAASAESVSSQAEITLDSMSSHIARIEAAIRSHILDNEEDFLGSVGGVSELSRRTEEFRDGVRELRRSFARVQREVSEPHEAVRVRTQQLKNLHDATRLLKRALRFLSALRRLRGQEDVLGLEAAXXXXXXXXXXXXXXVGXXXXXXXXXXXXX----AADLRELAKAAQSLQELESTLRDPEVAELEVVARERAYVEACGAAVRRMSADSLARGMKSLNQTDIGGALQVFFNLECLPARVKACVTHLAQEADEATSEALQPEALADATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRRSPATRDAGARRRTASMRAHAGKLAAALHGTSMEAWGLQRVLDKKRDPTTRTLLDATVRADRSAGGPGGLSLRAGAYRAYWDGLCRAVRGSVERALEADGA--------------------VGGXXXXXXVALVAMYPFLRKAFLRLISRLEEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFWQRPGA--------VGQQQRLAGGILGGSRWLALALEDDYNNLSLDPSAAGDEEQERQWDRR---GAEAGAGPAS------GRRVLGLRGGKXXXXXXXXXXXXXXXXXXXSDGARLLEALGPLRDLFLARSLERLTTPVEQMFPQFDGYMAAVPSKHDLASFFRSIHAELSLAVPAGSVGSAAATGSXXXXXXXXXXXXXXXXXSLEADFSLLPILLKGVVQAARLFCTKVEAMQSVEKGAYTFGGGSNAALGXXXXXXXXXXXXXXXXXXXXXXXXXXAPMEAWAPTLEQEHNLQLLELVVKLREALLGIPALVLPSPPTPAAA---------------------------------------AYGVECRERVAKAVRALDDLASRVFLEPYLSGVARAXXXXXSKMHRENFGPGVSAMAASEHXXXXXX-----SLFLHELQRALAALQADHFTRIAALRTPSAEAALRSLAARVLRAYVTHCALIRPLSEGGKARMAQDMATLEIALSPLARVSELGAVYLESRAFRTLLFVDD-ADDEGGDSNNQXXXXXXRGRGRDSRGFRGQK-------TDVTVYRSGAAPEHGRERRTRCWPSTQADGHERMAVHKSRGMSQQAYVTWLLGGGAAEE----------XXXXXXXXXXXXXXXXXXXXDRASGGKA--YTERSTLSPDTSYMAEAGAWSVVQACLDEYHQRRSVAVATGSGNADGGSAATAGSTEMLPRAVGLLPEAGPALLSAYEARG 1213
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: W7U1N2_9STRA (Conserved oligomeric Golgi complex subunit 5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N2_9STRA) HSP 1 Score: 229 bits (584), Expect = 2.200e-57 Identity = 279/1058 (26.37%), Postives = 386/1058 (36.48%), Query Frame = 2
Query: 839 DLRELAKAAQSLQELEGTLRDPEVSELDVVGRERAYVEACGAAVRRMSADSLARGMKALNQTDIGGALQVFFNLECLPARVRACVVHLADEAEDAVSEALQPRALADALSSXXXXXXXXXXXXXXXXXAEHRPKSPTRXXXXXXXXXXXXXXXXXXXXXXXXSARMRAHAGKLAAALYGTSMEAWGLQRVLDKKRDPTTRALL--------DATVRADR------------SGGGGGLSL------SAGA---------------YRAYWDGLCRVIRAVVERALEADGVGRGSGGGXXXXXXXXXXEYGVGGSGAALVAMYPFLRSSFLRLIKRLEEGTARHQGSSAVRRSDGGXXXXXXXXXXXXXXXALLWSKAGVNTAGSSTGSGQQPGGRGGVLGGSRWLSLALEIDDDLSLDSSXXXXXXXXXXXXXRRGGGAEAGAGPTSNGGAAYGRRGFGLRGSSGAAGTNAGDGDRSDSVRLLEALAPLRDLFLARSLERLTTPVEQMFPQFDGYMATVPSKHDLASFVRSIHAELALAVPAGSITARQGGGLAPSSEAEXXXXXXXXXXXEADLSLLPILMKGVVQAVRLFCAKVEAMQSVEQGAYAFGGXXXXXXXXXXPDDDMTSGGDMSGMSTAGGASIEAWAPTAEQKHNLQLLELVVKLREALLGIPALVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPL-ARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWLLGGGAAHEGKAREKGADXXXXXXXXXXXXXXXXXXXXDSVTHGGSAATYTERSTLSPDTSYMAEFGAWGVVQSCLDEYHQRRSVSVG 3886
+LR++AKAAQ L E+E L DP ++EL +V ER YV + G +RR SL M ++NQ D+ ALQVF NL+ L V C+ + E +A AL P AL ++ A R+R H + A L +S++ W LQR L K D T L D ADR + G G S SAG Y YW L +IR+ ERA R S V A +V YP S + L + T++ Q S ++ + G AL V G T S Q G +E +++ GP S L SS + G + EAL LRDL+L +SL+RL P+EQMFP +GY A +PSKHDL + +R + E+ A+ +GG L LLP +++G+V+AV LFCAK+EAM + +GA + W E++HNLQLL+LV L L +P + P +G C + VAE V L+ A + PY+ +A L +++MH EN+ P S F+ Q A+ AL+ H R L+ ++LAGR+LR YVSH AL+RPL+EAGKA++ DMA LE AL L +++ELGA Y E +AFR L F D+ + L E A+LRP+++ LF+RAP ELSSPH+ + S + V LL + +E GA A+ + D AE W +VQ CLD Y QR S + G
Sbjct: 220 ELRDIAKAAQHLHEVEAILEDPALAELSLVTAERPYVASLGLGLRRTGMASLKAAMLSMNQADLDPALQVFHNLQHLAPVVLKCLAAMVAEGAEATRLALDPGALEAVVAPDSSVPRLSSTAPTSSPPASTATSQ------------RQGSGEMEAIALRQRQVRIRDHCDRWATVLLQSSLKVWSLQRALHMKTDAATNQDLLSIVLQSSDFARAADRVMALPSVASSSAAKGRTGSSENNTHIESAGVRDRARGWAPSGVGALYWLYWLELTAIIRSTTERASR-----RAS------SVVAAPSSLAV----APIVNSYPHFLRSLTDALDSLVDSTSK-QCHSLLQGAPHGVLSRSQERGNPAALLAL------VEALGEGTSSEAQTG--------------LIEGEEE----------------------------HGPMSE----------RLSPSSLSLAPETAGGSHEERTVGAEALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEVVSALA-------EGGPL-----------------------LLPHVLQGMVKAVYLFCAKIEAMINTGEGARKL-------------------------------YPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPAFR---------------------------------------------VGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLENYAP------LPQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLELKAFRELCFFGDEQNPLTV------------------KGLLKERFTANLRPSTLLDALFARAPLELSSPHILQRCSARTLVEELLSIYYMDKRVLQEGGA--------------------------AEDEASMENLPSKRRDPRMAAESAHWQMVQLCLDAYAQRTSATQG 1034
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A836CDX3_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX3_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.480e-47 Identity = 133/405 (32.84%), Postives = 189/405 (46.67%), Query Frame = 2
Query: 2159 LLEALAPLRDLFLARSLERLTTPVEQMFPQFDGYMATVPSKHDLASFVRSIHAELALAVPAGSITARQGGGLAPSSEAEXXXXXXXXXXXEADLSLLPILMKGVVQAVRLFCAKVEAMQSVEQGAYAFGGXXXXXXXXXXPDDDMTSGGDMSGMSTAGGASIEAWAPTAEQKHNLQLLELVVKLREALLGIPALVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQE 3373
+L ALAP+RD +L SL RLT PVEQMF DGYMA VPSKHDLASFV+++ AE A+A A GG +SL P++M+G +AV+LFC+KV + ++ S A+ WA TA+Q HN+QLL L+ +LR A++ +P++V P E V +K +D AT L PYLS A ALE ++ MH+++F S ++++LQ A+ +Q++H +AAL P A+ LR L R++R++VSH AL+RP+ EAGK ++A+DMA LE+ LS +A V+ LGA Y E
Sbjct: 1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDA------VGG----------------------HVSLAPLVMRGAAKAVKLFCSKVSRL--------------------------------LASRSVRDRAN---WAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQC---------------------------------AQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFA---------NLEGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAE 300
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A7S2B2D8_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D8_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.300e-44 Identity = 148/496 (29.84%), Postives = 207/496 (41.73%), Query Frame = 2
Query: 2156 RLLEALAPLRDLFLARSLERLTTPVEQMFPQFDGYMATVPSKHDLASFVRSIHAELALAVPAGSITARQGGGLAPSSEAEXXXXXXXXXXXEADLSLLPILMKGVVQAVRLFCAKVEAMQSVEQGAYAFGGXXXXXXXXXXPDDDMTSGGDMSGMSTAGGASIEAWAPTAEQKHNLQLLELVVKLREALLGIPALVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEA-GLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWLLGGGA 3640
+LL AL P+R F+A+SLE L PVEQMFP +GY +PSKHD+ S +R + AELA A +LSL+P++++ +V+AVR KVE M A +G D MTS T EQ HN+QLLE +V L L GI V ++ V L+ A L P +SG+A LE ++K+H +NFG G S FL + AL L+ +H R+ T G LR LA R+ R++VS+ AL+RPLSEAG+ R+A+DMA E+ LS + LG ++E RA R LLF+ ++G A D L+ LRP++ ++ +S AP L+SPH +S++AYV WL+ G A
Sbjct: 100 QLLSALVPMRQRFMAKSLEALMRPVEQMFPNVEGYSNAIPSKHDVQSLMRIVDAELARATD--------------------------------ELSLMPLILRNLVKAVRFLSTKVEGMVYTSTSALVYG-------------DKMTS------------------QLTVEQDHNMQLLEFIVNLTSQLKGIVGAVLKGANVEPQEGDMKRFELC---------------------------------------ISPAVSALESLAKHQILRPAMSGMATTLEKHLAKVHDDNFGEGQPSEVPEDGT----------SKFLSDFDAALQVLRREHLSRLPRDTTTGVVGESLRDLARRLARSFVSNIALVRPLSEAGRLRLARDMAAFEMYLSSFYNLKGLGRSHEELRALRQLLFLGEEGHTPTAAD------------------VLSHDLCRSLRPSTALNHCYSTAPQTLTSPHGQCKVSQRAYVEWLVAGTA 465
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: I2CR59_NANGC (Conserved oligomeric Golgi complex subunit 5 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR59_NANGC) HSP 1 Score: 155 bits (392), Expect = 9.530e-38 Identity = 123/404 (30.45%), Postives = 174/404 (43.07%), Query Frame = 2
Query: 2165 EALAPLRDLFLARSLERLTTPVEQMFPQFDGYMATVPSKHDLASFVRSIHAELALAVPAGSITARQGGGLAPSSEAEXXXXXXXXXXXEADLSLLPILMKGVVQAVRLFCAKVEAMQSVEQGAYAFGGXXXXXXXXXXPDDDMTSGGDMSGMSTAGGASIEAWAPTAEQKHNLQLLELVVKLREALLGIPALVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGAECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPL-ARVSELGAVYQE 3373
EAL LRDL+L +SL+RL P+EQMFP +GY A +PSKHDL + +R + E+ A+ +GG L LLP +++G+V+AV LFCAK+EAM + +GA + W E++HNLQLL+LV L L +P + P +G C + VAE V L+ A + PY+ +A L +++MH +N+ P S F+ Q A+ AL+ H R L+ ++LAGR+LR YVSH AL+RPL+EAGKA++ DMA LE AL L +++ELGA Y E
Sbjct: 29 EALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEVVSALA-------EGGPL-----------------------LLPHVLQGMVKAVYLFCAKIEAMINTGEGARKL-------------------------------YPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPAFR---------------------------------------------VGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLKNYAP------LPQEQEQGDKGQTMNSRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLE 319
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A5D6XQT0_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQT0_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.090e-22 Identity = 93/308 (30.19%), Postives = 125/308 (40.58%), Query Frame = 2
Query: 2966 LEPYLSGVARALEDIVSKMHRENFG---PGASXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWLLGGGAAHEGKAREKGADXXXXXXXXXXXXXXXXXXXXDSVTHGGSAATYTERSTLSPDTSYMAEFGAWGVVQSCLDEYHQRRSVS 3880
L YL G+ LE I +KMH E+F P ++ S ++ E GA + +H R+ R G + R++ ++ H AL+RPL E+GK R+A DMA LE+ L L + LGA Y E RAFR ++F+D S + L +A + +RPT+VWH+L SRAP EL PH + S YV WL A E +A A D T+ AE AW V CLD Y QR S S
Sbjct: 1594 LGTYLQGLCAILESIFAKMHDESFADLPPVSASSTGATAAATGASAKSGGSRYMAEFNGAFHVVLDEHIRRLPNARFAGRC--VSDFVARLISVFLRHAALLRPLEESGKLRLANDMAQLELRLEQLLPLKALGAPYDELRAFRHMVFLD-------------------------SGAVLRDATVDKIRPTNVWHHLISRAPVELQLPHHMKRWSAAKYVEWL-DKSAGVEDRASPPAAATAEPLLLSITQVPLGYPCLKDR------------------RTALRAEKEAWKEVSKCLDAYAQRVSAS 1855
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A484EC71_BRELC (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC71_BRELC) HSP 1 Score: 115 bits (289), Expect = 3.720e-22 Identity = 92/338 (27.22%), Postives = 131/338 (38.76%), Query Frame = 2
Query: 2906 CRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXX-------SLFLVELQGALAALQADHFGRI--AALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWLLGGGAAHEGKAREKGADXXXXXXXXXXXXXXXXXXXXDSVTHGGSAATYTERSTLSPDTSYMAEFGAWGVVQSCLDEYHQRRSVSVGVD 3892
C+ER+ E L YL +A LE I +KMH E+FG G S ++ E+ A + +H R+ AAL P L R++ +V H AL+RPL+E GK R+A DM LE+ L + + + GA Y+E RAFR +LF++ + L +A + +RP++VWH+L SRAP EL PH R + Y+ WL D +TH P + E AW V+ CLD Y QR S+S +
Sbjct: 610 CQERI--------ENLQYALLGSYLQTLAGLLEPIFAKMHNESFGLGTDALKEASVKETIQSRSNVQTAQGTRGSKYMQEVSHVFAVILDEHLRRLPKAALVMPC----LVDFVERLMSTFVRHAALLRPLTERGKLRLANDMTQLELRLEQVVPLRKNGAPYEELRAFRHMLFLE-------------------------NHEILRDATIDKIRPSNVWHHLISRAPAELQLPHRLRNWTATKYIEWL----------------DTCAAIDQSSLPSTSVVASSEKVLTHSWRDVPLGMACLKDPQLALQVEKQAWKVILECLDAYSQRASISTNAE 894
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A8K1C6A0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A0_PYTOL) HSP 1 Score: 111 bits (277), Expect = 9.770e-21 Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 2
Query: 2900 AECRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGA-SXXXXXXXXXXXXXXXXXXSLFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWL 3625
A C E++ E L T L PYL +A LE I +KMH E+F S S ++ E + +H R+ ++ P + + R++ ++ H AL+RPL E GK R+A DMA LE+ L + + LGA Y E RAFR L+F++ S S L ++ + +RP++VWH+L SRAP EL PH + S YV WL
Sbjct: 618 APCHEQIQE----LQYT----ILGPYLQALAGVLESIFAKMHDESFADQTTSRDARGANAPIPATNPTGGSRYMSEFSSVFNVIIEEHIRRMPSV--PCVTTSVSAFIARLMSVFIRHAALVRPLEENGKLRLANDMAQLELRLESVLPLRSLGAPYDELRAFRHLIFLE-------------------------SHSILRDSMVDKIRPSNVWHHLISRAPLELQLPHHMKRWSAARYVEWL 825
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A662XB50_9STRA (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB50_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.350e-20 Identity = 93/344 (27.03%), Postives = 140/344 (40.70%), Query Frame = 2
Query: 2906 CRERVAEGVKVLDETATTVFLEPYLSGVARALEDIVSKMHRENFGPGASXXXXXXXXXXXXXXXXXXS------LFLVELQGALAALQADHFGRIAALRTPGAEAGLRSLAG---RILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWL-----LGGGAAHEGKAREKGADXXXXXXXXXXXXXXXXXXXXDSVTHGGSAATYTERSTLSPDTSYMAEFGAWGVVQSCLDEYHQRRSVSVGVDV 3895
CRE +A+ L L YL +A LE I +KMH E+FG S S F+ E A A + +H R+ P AE + LA R++ ++ H +L+RPL+E+GK R+A DMA LE+ L + + LG VY+E RAFR ++F++ + L ++ + +RP++VWH+L SRAP EL PH + + Y+ WL LG A+ + +V+ +P + AE AW V CLD Y QR S + ++
Sbjct: 643 CREMIADLEYAL--------LGYYLQALATLLEGIFAKMHGESFGDQTSASAVSASGDGPRSGSFRSSHGTSGSKFMQEFSNAFAVILEEHLRRL-----PIAEFATKCLADFVERLISVFIRHASLLRPLTESGKLRLANDMAQLELRLEHVLPLRNLGTVYEELRAFRHMIFLE-------------------------NGEILRDSTIDKIRPSNVWHHLTSRAPAELQLPHQMKHWTASKYIDWLDTRVALGAHASSPSSTLHPSSGKA------------------SAVSFSWQELPLGYPCLKNPRLALHAEKEAWKEVVKCLDAYTQRVSAAANAEL 930
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Match: A0A7S2B2G7_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2G7_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.130e-20 Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = 2
Query: 3107 SLFLVELQGALAALQADHFGRIAALRTPGAEA-GLRSLAGRILRAYVSHCALIRPLSEAGKARVAQDMATLEIALSPLARVSELGAVYQECRAFRTLLFVDDDGEDEEADDNSQGAGGRRGSRGRDSRSFLTEACMAHLRPTSVWHYLFSRAPDELSSPHVFRGMSEQAYVTWLLGGGA 3640
S FL + AL L+ +H R+ T G LR LA R+ R++VS+ AL+RPLSEAG+ R+A+DMA E+ LS + LG ++E RA R LLF+ ++G A D L+ LRP++ ++ +S AP L+SPH +S++AYV WL+ G A
Sbjct: 16 SKFLSDFDAALQVLRREHLSRLPRDTTTGVVGESLRDLARRLARSFVSNIALVRPLSEAGRLRLARDMAAFEMYLSSFYNLKGLGRSHEELRALRQLLFLGEEGHTPTAAD------------------VLSHDLCRSLRPSTALNHCYSTAPQTLTSPHGQCKVSQRAYVEWLVAGTA 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig854.13.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig854.13.4 >prot_P-littoralis_Contig854.13.4 ID=prot_P-littoralis_Contig854.13.4|Name=mRNA_P-littoralis_Contig854.13.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1324bp MTSISSSNSSSSSTASEILGRIENDAVFRGFLEAGFDPAAFASKIVRADVback to top mRNA from alignment at P-littoralis_Contig854:55794..69443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig854.13.4 ID=mRNA_P-littoralis_Contig854.13.4|Name=mRNA_P-littoralis_Contig854.13.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=13650bp|location=Sequence derived from alignment at P-littoralis_Contig854:55794..69443+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig854:55794..69443+ >mRNA_P-littoralis_Contig854.13.4 ID=mRNA_P-littoralis_Contig854.13.4|Name=mRNA_P-littoralis_Contig854.13.4|organism=Pylaiella littoralis U1_48|type=CDS|length=3972bp|location=Sequence derived from alignment at P-littoralis_Contig854:55794..69443+ (Pylaiella littoralis U1_48)back to top |