mRNA_P-littoralis_Contig85.88.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig85.88.2
Unique NamemRNA_P-littoralis_Contig85.88.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: D7FTR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTR9_ECTSI)

HSP 1 Score: 568 bits (1464), Expect = 1.200e-193
Identity = 343/576 (59.55%), Postives = 368/576 (63.89%), Query Frame = 1 
Query:  133 MVPLGDHGHSRAVVICFCGVAIRIGLALSGLQPTLAGAMELVVPSTSWERAQEGQFLGTLGLSHYAGGAFSGSPLMLAAVALCAMLPAAVQALAAATLFAAVDLASGLLLRAICVRAVAVESGDWETQLEEWMDDDSKPPTARPSQTASKGTAXXXXXXXXXXXXXXXXXGNGDMPPYGKGNSTGGSSAGGGGAAWDLPDIVLAAYVLNPVIAAQCAALSGDVLGRVLPLAALAAAGSRRPGVTAAALAAAACLWRFYAAPLILPAALMLGNKNCSGNIDGLLGGGLTGKGGTSSASWGRSADDFGRADGNGSERQKTVSKGRRGRSQDPPNSMVDAQSTGGDDGVATAGNIDGGATAEEPAFDPRYFELDGMAFLRLSAAFAAWCAFILGACWAATSGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKALTVAFKKRIRA 1860
            M P+  HG  RAV IC  G+A+RIGL+LSGLQP LAGAMELVV STSWERAQEG FLGTL                                                                 ETQLEEWMD+DSKPPT  P  +    T+                 GN  +    +GN TG SSAG GG AWDLPD+VLAAY+LNPVIA QCAALSGDVLGRV PLAALAAAGSRRPGVTA ALAAAACLWRFYAAPL+LPAALMLG  +C                                                                  G  G AT  N  GG  A   AFDPR  ++DG AFLRLSAAFAAWCA ILG CW ATSGSWAFL AA  GQLLCE+LTPNIGLYWYFFAEVFPRFRGFF+VLFLS PYVYVLPATLRLGMFPEAL SL++AIFGLFQPYPT+ DP+LAGCLFLC+PRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTV LNVLLAVFVLQFAAALVKRRKALT+AF+KR +A
Sbjct:    1 MSPVRGHGVHRAVGICCFGLAMRIGLSLSGLQPMLAGAMELVVSSTSWERAQEGYFLGTL-----------------------------------------------------------------ETQLEEWMDEDSKPPTDDPISS----TSIAVESNLAGGANTKRQTGNAAVS---RGNPTGVSSAGAGGVAWDLPDVVLAAYLLNPVIAGQCAALSGDVLGRVFPLAALAAAGSRRPGVTAGALAAAACLWRFYAAPLLLPAALMLGTFSC------------------------------------------------------------------GSAGAAT--NKAGGKKAA--AFDPRSLKVDGKAFLRLSAAFAAWCAAILGVCWLATSGSWAFLWAAARGQLLCEDLTPNIGLYWYFFAEVFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEALASLVLAIFGLFQPYPTLVDPMLAGCLFLCHPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVGLNVLLAVFVLQFAAALVKRRKALTMAFEKRRKA 434
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A836CN19_9STRA (GPI transamidase subunit PIG-U n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN19_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.020e-42
Identity = 172/557 (30.88%), Postives = 215/557 (38.60%), Query Frame = 1 
Query:  196 IRIGLALSGLQPTLAGAMELVVPSTSWERAQEGQFLGTLGLSHYAGGAFSGSPLMLAAVALCAMLPAAVQALAAATLFAAVDLASGLLLRAICVRAVAVESGDWETQLEEWMDDDSKPPTARPSQTASKGTAXXXXXXXXXXXXXXXXXGNGDMPPYGKGNSTGGSSAGGGGAAWDLPDIVL----AAYVLNPVIAAQCAALSGDVLGRVLPLAALAAAGSRRPGVTAAALAAAACLWRFYAAPLILPAALMLGNKNCSGNIDGLLGGGLTGKGGTSSASWGRSADDFGRADGNGSERQKTVSKGRRGRSQDPPNSMVDAQSTGGDDGVATAGNIDGGATAEEPAFDPRYFELDGMAFLRLSAAFAAWCAFILGACWAATSGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALV-----PALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKALTVA 1839
            +R  L  SGL P L+ A+ELVVP  SWERA EG FL   G+S Y GGAF+GSP +L    L    P    +   + LF A D+A+ LL+ A+     A E    E QL+  M +D +P  AR    A                                                  PD+V     AAY+LNPV+AAQCAA SG+V  R   L A+A A           L A+A ++  Y A L+LP AL+  +   S                       R+A                            P                                                                     W FL AA + QL   + TP +GL WY   + F   RG+F VL   H  V+  P  LRLG  P  L    +A   LF   PT+  P L  CL L +  T AR+R     G AALV     P  LLP +   WL+AGTGNAN+ YFQ +A N   AV VLQF AA V+RRKAL +A
Sbjct:    1 MRALLLHSGLVPMLSSALELVVPHVSWERALEGVFLKARGVSPYTGGAFTGSPALLLLAQLARRRPQRTWSALTSALFIAFDVAAALLIYAVARAVRADEPSPRERQLQAQMPEDHRPRAARARLLA--------------------------------------------------PDLVAHTAAAAYMLNPVLAAQCAARSGEVPARAALLLAVALAHGXXXXXXXXXLGASAVVFNLYDATLLLPLALLAAHARAS-----------------------RAAAPL------------------------TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXWRFLRAAADAQLWQRDATPGVGLRWYLTQQAFASVRGYFAVLLAGHALVHAAPLALRLGALPRPLAEASLAAAALFGAPPTLGAPCLVACLMLPHACTLARVR-----GGAALVVLGGAPLALLPVVARAWLRAGTGNANYLYFQALAANAAAAVGVLQFVAATVRRRKALVMA 443
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A1V9ZIX6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIX6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.410e-29
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 1 
Query: 1318 ATSGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKAL 1830
            AT+GSWAFL       L   +LTPN+G++WYFF E+F RFR +F  L   HPY+YVLP  +RL   P A T++L+ +F LFQ YP++ D  L     L +PR+   M+         +V + LLP M +LWL  G+GN+NF+Y QT+         V++F  A ++R K L
Sbjct:  249 ATTGSWAFLDHTYLWVLEYPDLTPNVGIFWYFFMELFDRFRAYFLFLLHVHPYLYVLPIYIRLHARPLAATAVLLGVFALFQAYPSVGDLGLFVASCLIHPRSVLGMQHKFITATGLVVASALLPVMWYLWLFPGSGNSNFFYNQTLVYQFFGVRLVIEFLTATMRRDKQL 419
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: T0RX85_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RX85_SAPDV)

HSP 1 Score: 129 bits (323), Expect = 3.400e-28
Identity = 70/168 (41.67%), Postives = 94/168 (55.95%), Query Frame = 1 
Query: 1327 GSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKAL 1830
            G W FL A     +   +LTPNIG++WYFF E+F RFR +F  L   HP +YVLP  LRL   P A T +L+ IF +F  YP + D  L G   L +PR+   MR    +     V  +LLP M +LWL  G+GN+NF+Y QT+   +     V +F  A ++R K L
Sbjct:  249 GGWGFLDATYLWVVRYPDLTPNIGIFWYFFMELFDRFRNYFLFLLHVHPLLYVLPVYLRLQCRPLAATGVLLGIFAIFVAYPALGDFGLFGTSLLLHPRSLIGMRHTFVLATGLAVATVLLPVMHYLWLFPGSGNSNFFYNQTLVFQLFGVKVVAEFLTATLRRDKQL 416
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A4Y9ZZ47_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZZ47_9AGAM)

HSP 1 Score: 127 bits (319), Expect = 9.280e-27
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 1 
Query: 1324 SGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNV 1770
            +GSW+++G       +  +LTPN GL+WYFF E+F  FR FF ++F  H  +YV P  ++    P   T LL+ +  LF+PYPT+ADP L   L   +P + A +R      +  L  ALLLP   HLW +AGTGNANF+Y  T+ L +
Sbjct:  484 AGSWSWIGNTWGAGFILPDLTPNPGLWWYFFTEMFDHFRPFFLMVFSVHLLIYVAPLCIKFQHDPLYATFLLLGVLALFKPYPTLADPGLFTSLLALFPESYAHLRHAPVTFLLHLHAALLLPLFHHLWTRAGTGNANFFYASTLVLGI 632
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A485LLY8_9STRA (Aste57867_23077 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.420e-26
Identity = 70/178 (39.33%), Postives = 99/178 (55.62%), Query Frame = 1 
Query: 1327 GSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLC---YPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKALTVAFKKR 1851
            GSW FL A     L   +LTPNIG++WYFF E+F RFR +F  L   +P++YVLP  +RL   P    ++L+A+F +FQ YP   D    G +F C   +P +   M+    +    +V ++L+P M  LWL  G+GNANF+Y QT+         + QF  A ++R K L   FK R
Sbjct:  259 GSWVFLDATYLWVLRYPDLTPNIGVFWYFFMELFDRFRNYFLFLLHLNPFLYVLPLYIRLRTRPLVYATVLLALFSIFQAYPAFGD---VGFVFTCCIMHPASILGMQNKFVLATGVVVTSVLMPVMAFLWLYPGSGNANFFYNQTLIFQYFYVRGIAQFVTATLRRDKQLDEYFKLR 433
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: T0LYL3_COLGC (GPI transamidase subunit PIG-U n=1 Tax=Colletotrichum gloeosporioides (strain Cg-14) TaxID=1237896 RepID=T0LYL3_COLGC)

HSP 1 Score: 118 bits (296), Expect = 3.210e-26
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 1 
Query: 1321 TSGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLL-PTMRHLWLQAGTGNANFYY 1746
            T  SW FL +    QL   +LTPN+GL+WYFF E+F  FR FF  +F  H   YVLP T+R+   P  + +LL+ IF +F+PYP++AD  L   +   +      MR    VG A ++ A  L P   HLW+ AG+GNANF+Y
Sbjct:   64 TGASWEFLSSTYGAQLTLNDLTPNVGLWWYFFIEMFDSFRSFFLAVFWLHLSSYVLPLTIRIRSQPLVVLTLLLGIFAIFKPYPSIADTSLFLAMLPLFRHIFPLMRYTF-VGAATIMYASFLGPAFYHLWIYAGSGNANFFY 205
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A5C3QSB6_9AGAR (GPI transamidase subunit PIG-U n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QSB6_9AGAR)

HSP 1 Score: 123 bits (308), Expect = 3.450e-26
Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 1 
Query: 1258 LRLSAAFAAWCAFILGACWAATSGSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTV 1758
            L L A F A+ A ++GA  A TSG W+++G  V   +L  +LTPN GL+WYFF E+F  FR FF ++F  H  +Y+ P  ++    P   T LL  I G F+ YPT+ADP L   +   +P   + +R  I   +  +  ALLLP   HLWL  G GNANF+Y  T+
Sbjct:  229 LPLFAEFFAYIAVLVGAS-ALTSGGWSWVGQNVFAGVLLPDLTPNTGLWWYFFTEMFDHFRPFFLMVFTMHLLIYIAPICVKFQHDPLFATLLLQGILGTFKAYPTLADPGLFIAMVSVFPEIYSHLRHPIVTTLLHIHAALLLPLFNHLWLAHGAGNANFFYASTL 394
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BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: W4GVM2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVM2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.540e-26
Identity = 71/169 (42.01%), Postives = 98/169 (57.99%), Query Frame = 1 
Query: 1330 SWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARM--RLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAVFVLQFAAALVKRRKAL 1830
            +W FL A         +LTPNIG++WYFF E+F RF+ +F VL   HPY+YVLP  +RL   P A   +L+A+  +FQPYP++ D   A   FL +P +   M  + V+  G+   V  +LLP M  LWL  G+GNANF+Y QT+         + QF AA ++R K L
Sbjct:  262 TWDFLRATYVWMHEYPDLTPNIGIFWYFFMELFDRFQSYFLVLLHLHPYLYVLPLFIRLRARPLAFACVLLALVSIFQPYPSLGDIGFALPCFLLHPSSIIGMPTKFVLAAGLG--VATVLLPVMGFLWLYPGSGNANFFYNQTLVFQYFYLRGIGQFLAATLRRDKQL 428
[Close]
BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Match: A0A8K0UU84_9AGAM (PIG-U-domain-containing protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UU84_9AGAM)

HSP 1 Score: 121 bits (304), Expect = 7.160e-26
Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 1 
Query: 1327 GSWAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVYVLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSARMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNV 1770
            GSW+++G +    L   +LTPN+GL+WYFF E+F  FR FF ++F  H  +YV+P  ++       +  L+  +   F+PYPT++DP L   +F  +P T   +   +   +  L  ALLLP   HLWL  GTGNANF+Y  T+   V
Sbjct:  230 GSWSWVGQSWGATLTLPDLTPNVGLWWYFFTEMFDHFRPFFLMVFSVHLLIYVVPVCIKFQHDMLYVVFLMAGVLAAFKPYPTLSDPGLFVSMFALFPETYPYLHHPLVTALLHLHSALLLPLFHHLWLSQGTGNANFFYASTLVFGV 377
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.88.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTR9_ECTSI1.200e-19359.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN19_9STRA1.020e-4230.88GPI transamidase subunit PIG-U n=1 Tax=Tribonema m... [more]
A0A1V9ZIX6_9STRA4.410e-2942.11Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0RX85_SAPDV3.400e-2841.67Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A4Y9ZZ47_9AGAM9.280e-2742.28Uncharacterized protein (Fragment) n=1 Tax=Hericiu... [more]
A0A485LLY8_9STRA2.420e-2639.33Aste57867_23077 protein n=1 Tax=Aphanomyces stella... [more]
T0LYL3_COLGC3.210e-2643.36GPI transamidase subunit PIG-U n=1 Tax=Colletotric... [more]
A0A5C3QSB6_9AGAR3.450e-2641.92GPI transamidase subunit PIG-U n=1 Tax=Pterula gra... [more]
W4GVM2_9STRA3.540e-2642.01Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A8K0UU84_9AGAM7.160e-2639.19PIG-U-domain-containing protein n=1 Tax=Cristinia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:350717..355316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTR9
Preferred namePIGU
PFAMsPIG-U
Model size2459
Max annot lvl2759|Eukaryota
KEGG koko:K05293
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009966,GO:0009987,GO:0010646,GO:0012505,GO:0016020,GO:0016021,GO:0016255,GO:0019538,GO:0019637,GO:0023051,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0042765,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046425,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0048583,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:0071944,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1902531,GO:1903509,GO:1904892
Exons5
Evalue2.6e-198
EggNOG OGsKOG2552@1|root,KOG2552@2759|Eukaryota
Ec32 ortholog descriptionGPI transamidase subunit PIG-U
Ec32 orthologEc-14_001080.1
Descriptionattachment of GPI anchor to protein
Cds size1788
COG categoryS
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.88.2prot_P-littoralis_Contig85.88.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig85 350849..354777 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791717.9024653-UTR-P-littoralis_Contig85:350716..3508481680791717.9024653-UTR-P-littoralis_Contig85:350716..350848Pylaiella littoralis U1_48UTRP-littoralis_Contig85 350717..350848 +
1680791717.9797366-UTR-P-littoralis_Contig85:354777..3553161680791717.9797366-UTR-P-littoralis_Contig85:354777..355316Pylaiella littoralis U1_48UTRP-littoralis_Contig85 354778..355316 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791717.9212773-CDS-P-littoralis_Contig85:350848..3509031680791717.9212773-CDS-P-littoralis_Contig85:350848..350903Pylaiella littoralis U1_48CDSP-littoralis_Contig85 350849..350903 +
1680791717.93211-CDS-P-littoralis_Contig85:351635..3517591680791717.93211-CDS-P-littoralis_Contig85:351635..351759Pylaiella littoralis U1_48CDSP-littoralis_Contig85 351636..351759 +
1680791717.9445555-CDS-P-littoralis_Contig85:352137..3523321680791717.9445555-CDS-P-littoralis_Contig85:352137..352332Pylaiella littoralis U1_48CDSP-littoralis_Contig85 352138..352332 +
1680791717.9576585-CDS-P-littoralis_Contig85:352850..3538711680791717.9576585-CDS-P-littoralis_Contig85:352850..353871Pylaiella littoralis U1_48CDSP-littoralis_Contig85 352851..353871 +
1680791717.9692328-CDS-P-littoralis_Contig85:354384..3547771680791717.9692328-CDS-P-littoralis_Contig85:354384..354777Pylaiella littoralis U1_48CDSP-littoralis_Contig85 354385..354777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig85.88.2

>prot_P-littoralis_Contig85.88.2 ID=prot_P-littoralis_Contig85.88.2|Name=mRNA_P-littoralis_Contig85.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=596bp
MVPLGDHGHSRAVVICFCGVAIRIGLALSGLQPTLAGAMELVVPSTSWER
AQEGQFLGTLGLSHYAGGAFSGSPLMLAAVALCAMLPAAVQALAAATLFA
AVDLASGLLLRAICVRAVAVESGDWETQLEEWMDDDSKPPTARPSQTASK
GTAPPNSSPAAAKSKGKTPAGNGDMPPYGKGNSTGGSSAGGGGAAWDLPD
IVLAAYVLNPVIAAQCAALSGDVLGRVLPLAALAAAGSRRPGVTAAALAA
AACLWRFYAAPLILPAALMLGNKNCSGNIDGLLGGGLTGKGGTSSASWGR
SADDFGRADGNGSERQKTVSKGRRGRSQDPPNSMVDAQSTGGDDGVATAG
NIDGGATAEEPAFDPRYFELDGMAFLRLSAAFAAWCAFILGACWAATSGS
WAFLGAAVNGQLLCENLTPNIGLYWYFFAEVFPRFRGFFQVLFLSHPYVY
VLPATLRLGMFPEALTSLLVAIFGLFQPYPTMADPVLAGCLFLCYPRTSA
RMRLVIPVGMAALVPALLLPTMRHLWLQAGTGNANFYYFQTVALNVLLAV
FVLQFAAALVKRRKALTVAFKKRIRAKTGDRNGEDRTAAGTQEGS*
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mRNA from alignment at P-littoralis_Contig85:350717..355316+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig85.88.2 ID=mRNA_P-littoralis_Contig85.88.2|Name=mRNA_P-littoralis_Contig85.88.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4600bp|location=Sequence derived from alignment at P-littoralis_Contig85:350717..355316+ (Pylaiella littoralis U1_48)
CGCGAAGAGCGGCACGACGAAGTCAACAGTCCCGCCGTGCGGACACCGAC
GGGGGGGTAAAAGCGAGAAAAGAGAAGCACGACACCATTCAGAGCACAGA
GCTATCAGAGCACAGAGCCAAGGCGGGCTACTATGGTACCCCTCGGAGAT
CATGGCCACAGTCGGGCGGTGGTGATCTGCTTTTGTGGTGAGTCGCTCGG
TCGGTTGTCCGTTTCCTCAGTTGTCCGCGATCTTGGTTCTCGTTTGTTCC
GTGTCCTTGGTTGATCACTGCTGTGGATGTCTTAGTGCGAAGTACTGCTG
TATCAAGTCCCCGTTTTTAGACCGTTGTTCATCATCAGGTCTTGATCTTG
ACTTTTTCTGACCCTACCTCTGAACATCATCAGCTCACCGCACATATTGA
ATCAAGATTCTTGTTTGACCATGTATGTTGTGCGCTCCTGGTCTCAACGG
TGTGGCCCTTCTCATCGCACTCTGGTGATGGTCGCTGTTTCATGTACGAA
ATAATGATACAGCAAGTAGGAAGATACAAAGTGGCGCGCTCGTCAAGGGC
TCCGAGCAGCACTTGGTGCATTGCCTTGCCAGCCTGGCCGCTGGCTGCTG
GCCGCTGGCGATCGCTCTGCAGGCGTGCGAAAAAAAGAAGAAGTTTCCGA
CACCCCATGTTCCACAACATTGAGATCAGGGAGTACTACTGCTGTAAATT
CCTACGCACTACTTGTAATGCACGGTCGAGCAAACATCTCAATTCGATAA
ACGGCAGCAGGCGCGGGCGATGAGCTGAATGTCGCGGGGGGGGGGGGTCA
GAAAAAAACAAGATCCAGATCTGCCTTCAGTACAACAACGCTCTTGTGCA
TACGTACTGCATACGGCTGTCCCCCCAACGCAAACAACATCGGGTATAAA
AAACGATGATACGACACAGGTGTTGCGATAAGAATCGGGCTGGCTCTCTC
TGGCCTGCAGCCGACGCTGGCGGGTGCAATGGAGCTCGTCGTGCCTTCCA
CGTCCTGGGAGCGAGCGCAAGAGGGACAATTCTTAGGAACCCTGTGAGCA
ATCCGGTAGCTTTCATGACGGAACAATAAAGAAGTGCCGTAAAAATTTTC
CCCAAGCCTTTCGTCAAGCATATTACAACGATTTCACGCGGTCCATTAGC
GGCACTTATGAGGAGCCGCACGCTACAGCAGTAATAAAAGTATTGGTGCG
GTTTCTGTGCCCCCTCCTCCCCGGGTCGTGTGCTACGTTCTTGCTGCCAC
GATCTCCTTGCTCCTGTGTAACCTCAACGTACCAACTACGCTTCCTGATT
GGGACAGAAGAAGCCAACAATCCGGCCAACAAATCTACATGTACCCAAGC
CAACATCCGCTGCACTTCTGACGCGTGCTCTCCTTCCTTTCCTCTTCCCG
GACAACTGCTGCAACGCGAAGGGGGTTGTCGCACTATGCCGGGGGCGCTT
TTTCCGGATCACCGCTGATGCTGGCGGCGGTTGCTCTCTGCGCGATGCTG
CCCGCCGCCGTGCAGGCTCTAGCCGCAGCAACCCTGTTCGCCGCCGTCGA
CCTCGCGAGCGGCTTGCTGCTCCGAGCGATATGCGTGCGCGCGGTTGCTG
TGGAGTCCGGTGATTGGTGAGAGGGATGCGTACAGATCCGCACTGCTGTC
GTGGATTCAACGTAAAGGGCATTTGGAGCCTTACTGCAGTGAGTCATTGT
TGCTCGTTCGCGCGATACATTGCTTGGCTTCGCGTGCTTCTTTCACGTCG
GCGTTAGTATTTTGTTCCGTTGCGTTAGGTGGAGCAGTCCGATCGGCGGG
CTTGCTGTGCGGCATAGAAAACACAAATACCGATAAAGAACTGCTCCCAC
ACCATTGCTGTTGTTTCCTCATCAAGAGTCTCCACCGCACCACATCCTCC
CTGCTTGCGTTGCTCAGCCAAATACACCACACAGCAGTAGTCTCTTTTTT
AGAAAGGAAGCGTCCATTATTCCAGAAAAAACAAGAAACGCTACTTTGGC
GAGGGCTGTACCGCATGAAGCGAGCGTAGGAGACATCGCTGTTTCCACGA
TTAAAATGGACTGTCTCTCTCAGGTGTCATATGCAGTACTGAGTTTGATC
GACCCTCCGTGCTTACCCACCCCTCTCCTCTCAGGGAAACACAGCTGGAA
GAATGGATGGACGATGATTCTAAGCCGCCGACGGCGAGGCCATCCCAAAC
CGCCTCGAAGGGGACCGCGCCGCCGAATTCTAGCCCCGCCGCTGCAAAGT
CGAAGGGGAAAACGCCCGCAGGAAACGGAGACATGCCTCCCTACGGGAAA
GGGAACTCCACAGGCGGCTCGTCAGCTGGCGGCGGCGGTGCCGCGTGGGA
CCTCCCCGACATCGTTCTCGCAGCGTACGTGCTGAACCCCGTAATTGCCG
CGCAATGCGCGGCTCTGTCCGGCGACGTGCTCGGGCGGGTGCTGCCCTTG
GCCGCCCTGGCGGCCGCTGGCTCTCGGCGACCGGGTGTCACCGCTGCGGC
ACTCGCCGCGGCCGCGTGCCTCTGGCGTTTTTACGCCGCACCGCTCATAC
TACCAGCGGCGCTGATGCTAGGAAACAAAAACTGCTCCGGGAACATCGAT
GGTCTGCTAGGTGGCGGCCTGACCGGGAAGGGTGGCACATCTTCTGCTTC
TTGGGGGAGAAGCGCGGATGATTTTGGACGCGCGGATGGTAACGGTTCGG
AAAGGCAGAAAACCGTGAGCAAAGGGCGCCGAGGGCGATCGCAAGACCCC
CCCAACAGCATGGTGGACGCGCAATCCACCGGTGGAGACGATGGCGTGGC
GACGGCAGGAAACATCGACGGTGGTGCGACAGCAGAAGAACCCGCGTTCG
ATCCGCGATACTTCGAACTCGACGGAATGGCCTTCCTTCGTCTTTCTGCG
GCGTTCGCGGCGTGGTGCGCTTTCATCCTCGGGGCGTGTTGGGCGGCCAC
GTCCGGTTCCTGGGCGTTCCTGGGCGCCGCGGTGAACGGCCAGCTTCTGT
GCGAGAACTTGACCCCGAATATCGGGCTGTACTGGTATTTCTTTGCGGAA
GTGTTTCCGAGGTTCCGTGGATTCTTTCAGGTCCTGTTCCTGTCTCACCC
CTACGTGTATGTCCTCCCGGCCACGTTGAGGCTCGGCATGTTCCCGGAGG
CTTTGGTGAGAGGAGAAACGTGTCCGGGCTGGAAGAGGAAGCGTTGAACA
TCTACTGTAATGATTGTTCGAATCCCCGAAGTAAAGGTCGTGTTTCACGG
GCGTTCGTATTTCTGGAGGGGCCCGATAGTAGCTGTTAGATGGTTTTGTT
CTGTTTTGTTTAGATCGGGCATGTTCATGAAGCCGATTCCATCTTTGTCG
AGTGCTAATGTGTCAGTCAATGCGGTTATTGAGTCGCTGTGCTCTTTGAA
GGAGGCGGCCCCACTTTGGTCTTTATTTCACTAACAGAAAGCATATTCTT
TTGTGGGTGCCCTCGGCGTGAACGTTTTGCTGCTGGGTGCCCGAAGACGT
TCTCATTACGCCCCCCCCCATGACGTCTTCAAAAGCAAGCATATTATTTC
ACGAATATCTATACCCCCGGCTCCCCAATGCCCTTTTGTCCAACCCCTTC
TTGCCCTTATTTCCCTCTCAAACTCGGTTGGATGCTGCACGTTTTTGCCG
CTGTGGTTCTCTTGGCAGACGTCGCTTTTGGTGGCCATCTTCGGGCTGTT
CCAGCCGTACCCTACCATGGCCGACCCGGTGTTGGCGGGATGCCTCTTCC
TCTGCTACCCTCGCACTTCTGCTCGCATGCGTCTCGTGATTCCCGTGGGG
ATGGCGGCCCTGGTGCCGGCCTTGTTGCTGCCGACCATGCGACACTTGTG
GCTGCAGGCGGGCACCGGCAACGCGAACTTCTACTACTTTCAGACGGTAG
CGTTAAATGTTCTACTCGCCGTGTTCGTGCTGCAGTTCGCCGCGGCGCTT
GTAAAGAGGCGGAAGGCGCTTACCGTAGCGTTCAAGAAGCGCATAAGAGC
GAAAACGGGGGATAGGAATGGCGAGGACCGAACAGCGGCAGGAACGCAGG
AGGGTTCGTGAGCAGCAGGAGGCGGCAAGCGGGGGAAAGACACCATCGTT
TTTGGCATGTTGTCCTCTCTCTGCTCTTTTCGGGCCCACTGCTGTGTCCT
GAAGGGTATTGGAAGCAGTTTTTTTTCGGGGGGGGGCTTGGGCAGAAATG
ACCTTCGTGGCCAACACCAGGATCCACAGATTACCCGAGGTTCACGTTTT
ACACCCAATTTTGGGATTTTGAACAGCAAGATATGTGCAACGAACTCCTT
GGGGTGGAACGACCGTTTGTCCGGCCTAGCCGTCAGTGGTCTGTCTTCCC
TGCTGTTCTCTTGATTGATTTTGGTTCTATGTGGCTCTAATCGGATTCAA
TTTTGTGCGCGCAGAGTCGCGAAGAAGACGCATCATGTGACGATACCCAA
CGAAGTCAATGCGCTCTGCGCTCGTCGCAAGTTTGAGGGTGGCTAAGGAA
CGGATCTTGACCATTTGATATCATGGAATCACCCCTGCATCCACATGTTT
TTGGTCTCGTCGTGTGTTTGGTACTTCTGCAAATGCGCAAGCAGTCTTAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig85:350717..355316+

>mRNA_P-littoralis_Contig85.88.2 ID=mRNA_P-littoralis_Contig85.88.2|Name=mRNA_P-littoralis_Contig85.88.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1788bp|location=Sequence derived from alignment at P-littoralis_Contig85:350717..355316+ (Pylaiella littoralis U1_48)
ATGGTACCCCTCGGAGATCATGGCCACAGTCGGGCGGTGGTGATCTGCTT
TTGTGGTGTTGCGATAAGAATCGGGCTGGCTCTCTCTGGCCTGCAGCCGA
CGCTGGCGGGTGCAATGGAGCTCGTCGTGCCTTCCACGTCCTGGGAGCGA
GCGCAAGAGGGACAATTCTTAGGAACCCTGGGGTTGTCGCACTATGCCGG
GGGCGCTTTTTCCGGATCACCGCTGATGCTGGCGGCGGTTGCTCTCTGCG
CGATGCTGCCCGCCGCCGTGCAGGCTCTAGCCGCAGCAACCCTGTTCGCC
GCCGTCGACCTCGCGAGCGGCTTGCTGCTCCGAGCGATATGCGTGCGCGC
GGTTGCTGTGGAGTCCGGTGATTGGGAAACACAGCTGGAAGAATGGATGG
ACGATGATTCTAAGCCGCCGACGGCGAGGCCATCCCAAACCGCCTCGAAG
GGGACCGCGCCGCCGAATTCTAGCCCCGCCGCTGCAAAGTCGAAGGGGAA
AACGCCCGCAGGAAACGGAGACATGCCTCCCTACGGGAAAGGGAACTCCA
CAGGCGGCTCGTCAGCTGGCGGCGGCGGTGCCGCGTGGGACCTCCCCGAC
ATCGTTCTCGCAGCGTACGTGCTGAACCCCGTAATTGCCGCGCAATGCGC
GGCTCTGTCCGGCGACGTGCTCGGGCGGGTGCTGCCCTTGGCCGCCCTGG
CGGCCGCTGGCTCTCGGCGACCGGGTGTCACCGCTGCGGCACTCGCCGCG
GCCGCGTGCCTCTGGCGTTTTTACGCCGCACCGCTCATACTACCAGCGGC
GCTGATGCTAGGAAACAAAAACTGCTCCGGGAACATCGATGGTCTGCTAG
GTGGCGGCCTGACCGGGAAGGGTGGCACATCTTCTGCTTCTTGGGGGAGA
AGCGCGGATGATTTTGGACGCGCGGATGGTAACGGTTCGGAAAGGCAGAA
AACCGTGAGCAAAGGGCGCCGAGGGCGATCGCAAGACCCCCCCAACAGCA
TGGTGGACGCGCAATCCACCGGTGGAGACGATGGCGTGGCGACGGCAGGA
AACATCGACGGTGGTGCGACAGCAGAAGAACCCGCGTTCGATCCGCGATA
CTTCGAACTCGACGGAATGGCCTTCCTTCGTCTTTCTGCGGCGTTCGCGG
CGTGGTGCGCTTTCATCCTCGGGGCGTGTTGGGCGGCCACGTCCGGTTCC
TGGGCGTTCCTGGGCGCCGCGGTGAACGGCCAGCTTCTGTGCGAGAACTT
GACCCCGAATATCGGGCTGTACTGGTATTTCTTTGCGGAAGTGTTTCCGA
GGTTCCGTGGATTCTTTCAGGTCCTGTTCCTGTCTCACCCCTACGTGTAT
GTCCTCCCGGCCACGTTGAGGCTCGGCATGTTCCCGGAGGCTTTGACGTC
GCTTTTGGTGGCCATCTTCGGGCTGTTCCAGCCGTACCCTACCATGGCCG
ACCCGGTGTTGGCGGGATGCCTCTTCCTCTGCTACCCTCGCACTTCTGCT
CGCATGCGTCTCGTGATTCCCGTGGGGATGGCGGCCCTGGTGCCGGCCTT
GTTGCTGCCGACCATGCGACACTTGTGGCTGCAGGCGGGCACCGGCAACG
CGAACTTCTACTACTTTCAGACGGTAGCGTTAAATGTTCTACTCGCCGTG
TTCGTGCTGCAGTTCGCCGCGGCGCTTGTAAAGAGGCGGAAGGCGCTTAC
CGTAGCGTTCAAGAAGCGCATAAGAGCGAAAACGGGGGATAGGAATGGCG
AGGACCGAACAGCGGCAGGAACGCAGGAGGGTTCGTGA
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