mRNA_P-littoralis_Contig85.68.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig85.68.4
Unique NamemRNA_P-littoralis_Contig85.68.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A6H5JDG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDG3_9PHAE)

HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0
Identity = 603/966 (62.42%), Postives = 663/966 (68.63%), Query Frame = 2 
Query:  371 RHMEHENRYSAACLKPLRRRASALFRRMVDRQPEEEGGARRSVPERLGGYLYYTRRDDGKGFPVYVRRPVEGTLHDEQV----------------------VFDLNEIEEHGLRTGSGGHGGDHGGGGA----------------------KGDPDHVPPTPALGSMKLSPDQRMLACTIGVDGSDRFVLAVFDLLGGLGGEGRSGSGNAHRGPTAAVLSEDAIWDDVVGVEWGSSWPPT--SRGGGX----------GGRGDPEVSKYELYYTVPDELRRPWQVRRATLHRRTRTGYSGGXXXXXXXXXXXXXGWRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPS---GAGDGQNEAAT------GVGEYRLVRV--------RQPPGRRRGSAS----------SLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAAS--------DGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPS-----------ACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPGSPPFDGRDYSCYTVQVASHDEEMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVREQEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTGDAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            R  +HENRYSAA L+PL RRAS LFRRMVDRQPEEEGG  RSVPERLG +LYYTRRDDGKGFP+YVRRPVEGTL DEQV                      VFDLNE+EE GL        GD G G                          +     PTPALG+MKLSPDQRMLACT+ +DGSDRFVLAVFDLLGG G E   G G   +GPT A+L EDA+WDDVVGVEWGS+W P   +RGGGX          GG  D    +YEL+YTVPD LRRPWQVRR  +H+RT +  S G              W VDSA DR+VFEE++DAFFVDVG+TKDHSFVVINVHSKTTSEVYL+P +T               G+G  A       E   XXXXXXXXXXXXX                QGVEYYVDH+GDAFYIVTNSPPS   G GD    + T        GEYRLVRV              RRG             SLEGVAD PWEA+PCG    T+QEMDLFR HCVLYE+   SGCPRLRVVPLA S        DGT P  SPF VSPP AGG          S  G    N S   SR+       G +  S           ACTLRPGVNSWFEARTARFSLSSP APEDVYD+CLESGR++LLRRTEVPG+P FDGRDYSCYT ++ SHD EMVPLTIVHRR  ++DG N+L+LHGYGSYGMSLPIDY P  ACMLERGWVLAFAHVRGGGERGKAWH+ GRG +KWNSFWDF+ACA+HL++ GFTSPS +GA VNSAGGLLAG MAN RPGLFSAMVMKAPFLGVLSAMRD+SLPLTVHEFDEWGDPNSS EVEAMIRSYCPYENV EQEYPALLVT S+NDNRVNVWDPAKWVSRVRAANTG +PVLLRVS++DGHHGP NTLDGL+DSA+EM+FLEK+L+V
Sbjct:   24 RRTQHENRYSAAYLRPLHRRASELFRRMVDRQPEEEGGDSRSVPERLGDFLYYTRRDDGKGFPIYVRRPVEGTLDDEQVACMKGAKPGFVAQFSSTLVSAKVFDLNEVEERGL--------GDIGCGDRGXXXXXXXXXXXXXXXXXXXXXXXELGTAAPTPALGAMKLSPDQRMLACTLCMDGSDRFVLAVFDLLGGGGRE--DGDGGKRQGPTVALLREDAMWDDVVGVEWGSTWSPQDLARGGGXXXXXXXXXXEGGLRDC-TPEYELFYTVPDHLRRPWQVRRVVIHQRTSSAESAGRTDDACGGGGTGEDWTVDSASDRSVFEEEDDAFFVDVGKTKDHSFVVINVHSKTTSEVYLLPGSTSPI-----------AGRGGAAGV-----EGXXXXXXXXXXXXXXXAHEHECAGPTLLRRRRQGVEYYVDHSGDAFYIVTNSPPSKNGGVGDRHGRSGTPRSSAVDAGEYRLVRVPLQQQXXXXXXXXVRRGXXXXXXXXXXXXXSLEGVADVPWEAVPCGRHPGTVQEMDLFRDHCVLYETCPASGCPRLRVVPLAHSSPAPAAGGDGTLP--SPFVVSPPNAGG------HCGDSVGGSVVDNKSVSGSRNASGLVEQGASAASXXXXXXXXXSAACTLRPGVNSWFEARTARFSLSSPTAPEDVYDVCLESGRVELLRRTEVPGNPRFDGRDYSCYTTRIPSHDREMVPLTIVHRRGIELDGKNKLLLHGYGSYGMSLPIDYDPAQACMLERGWVLAFAHVRGGGERGKAWHSGGRGLDKWNSFWDFEACAEHLVSGGFTSPSLMGAQVNSAGGLLAGVMANHRPGLFSAMVMKAPFLGVLSAMRDSSLPLTVHEFDEWGDPNSSAEVEAMIRSYCPYENVVEQEYPALLVTTSLNDNRVNVWDPAKWVSRVRAANTGQSPVLLRVSESDGHHGPGNTLDGLKDSALEMAFLEKHLKV 954
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: D7FTR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR5_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 1.220e-199
Identity = 387/655 (59.08%), Postives = 425/655 (64.89%), Query Frame = 2 
Query:  341 MHDTGSEEMLRHMEHENRYSAACLKPLRRRASALFRRMVDRQPEEEGGARRSVPERLGGYLYYTRRDDGKGFPVYVRRPVEGTLHDEQVVFDLNEIEEHGLRTGSGGHG-GDHGGGGAK-----------GDPDH-----VPPTPALGSMKLSPDQRMLACTIGVDGSDRFVLAVFDLLGGLGGEGRSGSGNAHRGPTAAVLSEDAIWDDVVGVEWGSSWPPTSRGGGXGGR---------GDPEVS-KYELYYTVPDELRRPWQVRRATLHRRTRTGYSGGXXXXXXXXXXXXXGWRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAAS--------DGTRPGSSPFAVSPPAAGG----------CXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGV-ATPSACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPGSPPFDGRDY 2167
            MHD GSEE+LRH+EHENRYSA  L+PL RRAS LFR MVDRQPEEEGG  RSVPERLG +LYYTRRDDGKGFP+YVRRPVEGTL DEQVVFDLNE+EE GL    G  G GD GGGG             G+ D         TPALG+MKLSPDQRMLACT+ +DGSDRFVLAVFDLLGG  G    G G   +GPT A+L EDA+WDDV+GVEWGS+W P       GG          G  E S +YEL+YTVPD LRRPWQVRR  +HRRT +  S G             GWRV+SA DR VFEEKNDAFFVDVG+TKDHSFVVINVHSKTTSEVYL+P +T              VG G  A      E ++  XXXXXXXXXXXXX               QGVEYYVDH+GDAFYIVTNSPPS  G        GVG+            R G +     VAD PWEA+PCG    T+QEMDLFR +CVLYE+   SGCPRLRVVPLA S        DG  P  SPF VSPP AGG           XXXXXXXXX   G  S +   E          G   A+ +ACTLRPGVNSWFEARTARFSLSSP APEDVYD+CLESGR++LLRRTEVPGSP FDGRDY
Sbjct:    1 MHDIGSEEVLRHLEHENRYSATYLRPLHRRASELFRLMVDRQPEEEGGDSRSVPERLGDFLYYTRRDDGKGFPIYVRRPVEGTLDDEQVVFDLNEVEERGL----GDIGCGDRGGGGDSRNEEGTSSYCGGEEDEEELGTASSTPALGAMKLSPDQRMLACTLDMDGSDRFVLAVFDLLGG--GRREDGDGGKRQGPTVALLREDAMWDDVIGVEWGSTWSPQDLARDGGGXXXXXXXXEGGLKECSLEYELFYTVPDHLRRPWQVRRVVIHRRTSSAESAGRTDDACGGGGTGEGWRVESASDRAVFEEKNDAFFVDVGKTKDHSFVVINVHSKTTSEVYLLPGSTSPK-----------VGSGGAAGV----EGKAATXXXXXXXXXXXXXHEHECAGPTLLRRRRQGVEYYVDHSGDAFYIVTNSPPSKNG--------GVGD------------RHGQS-----VADVPWEAVPCGRHPGTVQEMDLFRDYCVLYETCPASGCPRLRVVPLAHSSPAPAAGGDGRVP--SPFVVSPPNAGGRCGDSVXXXXXXXXXXXXXXXXXGSLSASGPVEQGEPAASAAAGAATASSAACTLRPGVNSWFEARTARFSLSSPTAPEDVYDVCLESGRVELLRRTEVPGSPRFDGRDY 607
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: D7FTR4_ECTSI (Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR4_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 3.750e-146
Identity = 214/252 (84.92%), Postives = 235/252 (93.25%), Query Frame = 2 
Query: 2207 MVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVREQEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTGDAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            MVPLTIVHRR  ++DG NRL+LHGYGSYGMSLPIDYHP  ACMLERGWVLAFAHVRGGGERGKAWHA GRG +KWNSFWDF+ACA+HL++ GFTSPS +GA VNSAGGLLAG MAN RPGLFSAMVMKAPFLGVLSAMRD+SLPLTVHEFDEWGDPNSS EVE+MIRSYCPYENV EQEYPA+LVTAS+ND RVNVWDPAKWVSRVRAANTG +PVLLRVS++DGHHGP NTLDGL+DSA+EM+FLEK+L+V
Sbjct:    1 MVPLTIVHRRGIELDGKNRLLLHGYGSYGMSLPIDYHPAQACMLERGWVLAFAHVRGGGERGKAWHAGGRGLDKWNSFWDFEACAEHLVSGGFTSPSLMGAQVNSAGGLLAGVMANQRPGLFSAMVMKAPFLGVLSAMRDSSLPLTVHEFDEWGDPNSSAEVESMIRSYCPYENVVEQEYPAMLVTASLNDKRVNVWDPAKWVSRVRAANTGQSPVLLRVSESDGHHGPGNTLDGLKDSALEMAFLEKHLKV 252
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A1V9ZTT9_9STRA (Prolyl endopeptidase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTT9_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.170e-95
Identity = 228/602 (37.87%), Postives = 300/602 (49.83%), Query Frame = 2 
Query: 1169 DRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVA---DAPW-EALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPSACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPGSPPFDGRDYSCYTVQVASHDEEMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVREQEYPALLVTASVNDNRVNVWDPAKWVSRVRAAN--TGDAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYL 2956
            D  VF E + + ++DV  TKD  FV+IN +SK +SEV+ +  +  TA                                                              Y+ DHAGDAFYIVTN+         N A      Y+++R              L+ VA    APW E LP   D   I +MDLFR H VLYE     G PR+RV PLAA     P  S     PP                                           + C+L PG+N  F A   RFSLS+P+ PE VY   L S  + +L+ T+  G+  FD RDY C  V+V       VPLT+VH +D + DG+N  +L GYG+YG +L + Y  E   +L R WVLAFAHVRGGGE G  WHA GR   K NSF DF+ACA++L+A+G+TSP+ L A   SAGGL+ G +AN  P LF A+V+  PF+ +++ M+D SLPLT+HE+DEWG+PN     + M+ SY P +NVR+  YP +LVTA++ND RV  W+P K V  +RA +  T    V LRVS+  GH G    LD L+ +A+E  FL + L
Sbjct:  206 DALVFVEHDPSVYLDVVLTKDQKFVLINGNSKQSSEVHALDASDPTA-------------------------------------------------LPVLLRSRTAHTHYFADHAGDAFYIVTNA---------NNAVN----YKIMR--------------LDDVAVGTSAPWIEVLPDQSD-VKIDDMDLFRDHLVLYERH--DGLPRIRVCPLAA-----PTESHVVPLPP-----------------------------------------DHACCSLIPGINRDFGAGAVRFSLSTPLVPEIVYHYDLASRALTVLKETKPGGA--FDRRDYVCTRVRVGQ-----VPLTLVHHKDVKPDGANPTLLLGYGAYGANLELGYEVEQLSLLARKWVLAFAHVRGGGELGLRWHAQGRQLAKKNSFEDFRACAEYLVAQGYTSPAKLAAKGTSAGGLIMGFVANNHPDLFGALVLNVPFVDLVATMQDESLPLTIHEYDEWGNPNDPATRDYML-SYSPCDNVRDHAYPPMLVTAAMNDMRVQYWEPIKLVHLIRARSKATPADSVWLRVSEDGGHFGGGGRLDQLQSAAIEQVFLHRAL 674
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A835Z9Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z8_9STRA)

HSP 1 Score: 329 bits (843), Expect = 2.260e-92
Identity = 291/969 (30.03%), Postives = 410/969 (42.31%), Query Frame = 2 
Query:  320 GDDEYRWMHDTGSEEMLRHMEHENRYSAACLKPLRRRASALFRRMVDRQPEEEGGARRSVPERLGGYLYYTRRDDGKGFPVYVRRPV---EGTLH--------DEQVVFDLNEIEEHGLRTGSGGHGGDHGGGGAKGDPDHVPPTPALGSMKLSPDQRMLACTIGVDGS-DRFVLAVFDLLGGLGGEGRSGSGNAHRGPTAAVLSEDAIWDDVVGVEWGSSWPPTSRGGGXGGRGDPEVSKYELYYTVPDELRRPWQVRRATL----HRRTRTGYSGGXXXXXXXXXXXXXGWRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPS--GAGDGQNEAATGVGEYRLVRVRQPPGRRR-------GSASSLEGV---------------ADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGT--RPGSSPFAVSPPAAGGCXXXXXXXXXSSDGE----SSTNISSESSRDCDFKGRGGVATPSACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLES------------GRMDLLRR-------------TEVPGSPPFDGRDYSCYTVQVASHDEEMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLI------------------AEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVREQEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTGDAP----VLLRVSDTDGHHGPDNTLDGLRDS-AMEMSFL 2944
            G  +  W+ D     +      EN  +   L       + L + ++ R P +      ++PER+G +LYY+R D   G P++ R+P    + + H         E VV DLN++E  G                            ALG MKLS D R LA T+   G+ D   L + DL      +G        R P    L        V   EWG             G    +   Y LYYTVPD+L RP  V R  L      R      GG                        V  E + A+FVDV RTKD + + ++ +SKT SEV++             GGG + + +      G+ D   +                                VEYYV+H     +I+TN+P    G+ DG+   A+      L     PP   R       G+  ++E                 A  PW A+     G  +++MD+F  H  LYE + ++G PRLR + L+A+DG       + FA  PPAA             +       + +++ S S       G GG                  A +                +  +                 L R+              EVPG PPF   DY+CY +   S D   VP+T+ H R+  +DGS  LVL GYG+YG SLP+DY PEH  +LERGWVLA+AHVRGG E GK WH  GRG +K N+FWD +A A+ L                    EG++SP  + AH +SAG L+AG +AN RP LF AMVM++PFL   + + +  LPLT+HE+DE+GDP + EEV   ++ Y P +NV+ Q YPA+LVT +++D RV  W+  KW +R+R            VLL+V+   GH G  + +DG  D+ AME++FL
Sbjct:   23 GSGDLAWLRDPSDRRVAALAAAENGRTEQALAHTAELQATLKKEIISRTPPDL-----NLPERIGPWLYYSRPDAHGGAPIFYRQPAPAGDSSHHLLPPEPSPKETVVLDLNKLETGG----------------------------ALGMMKLSADHRFLAATVDTAGAGDAHELLLVDLAAAAASDG------TPRPPLGPPLGH------VHACEWG-------------GETLADDGHYALYYTVPDDLGRPCAVHRVRLVPSPPPRRAAALLGGAP--------------------ELVLSEPDPAYFVDVARTKDGALLTVSCNSKTASEVHVARAR---------GGGGLHLIR--AREPGELDHPAATMFVVPLLWGTSSGPASQA------------SVEYYVEHCRGTLHIITNAPSGIPGSSDGEYHLASMPLAAALATPPVPPASPRXXXXXXXGAVPAVEAALSNDAALADLAPETPAPPPWRAVLPPPRG-RLEDMDVFTQHIALYEVT-VAGRPRLRALALSAADGAVDADADARFAPLPPAARRGAALRAGANRDAGARRVRFALSSVLSPSEELAFDMGGGGAEVLXXXXXXXXXXXXXXAESPXXXXXXXXXXXXXXXVAADERAXXXXXXXXXXXXXXLARQQELPFDMXXXXGGAEVPGEPPFGADDYACYRLTAHSWDGAPVPITVAHARNIPLDGSRPLVLFGYGAYGQSLPLDYSPEHLPLLERGWVLAWAHVRGGREMGKVWHEHGRGLHKMNTFWDSEARAEDLCWLAMXXXXXXXXXXXXXXDEGYSSPPLMTAHTHSAGALIAGYIANNRPDLFRAMVMRSPFLDPANTLMERDLPLTIHEYDEFGDPRN-EEVLRYLKEYSPCDNVQRQRYPAMLVTTALDDMRVGYWEAFKW-ARLRGXXXXXXXXXXCVLLKVAHEGGHRGAVH-MDGHIDNVAMELAFL 885
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A5D6YEZ7_9STRA (Prolyl endopeptidase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEZ7_9STRA)

HSP 1 Score: 312 bits (800), Expect = 3.200e-88
Identity = 232/657 (35.31%), Postives = 307/657 (46.73%), Query Frame = 2 
Query: 1157 DSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAP-----WEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATP---SACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPGS------PP-----------------------------------FDGRDYSCYTVQVASHDE--EMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVRE-QEYPALLVTASVNDNRVNVWDPAKWVSRVRAA-----NTGDAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYL 2956
            D+     V+ E +D+FFVDV +TKD  FV+IN +SKTTSE++ +                             SD+ R+                               G  Y+ DHAGD F+IVTN+         ++AA     Y++V            +S+   V D P     W           I+++DLFR   VLYE  A    PR+RV  LA      PG+SP                   X      S  ISS             V  P   + C + PGVN  F A++ RFS+S+P+ PE VYD  + S  + +L+   V  +      PP                                   FD   Y+C  V V S       VPLT+VHRR    DG N  +L GYG+YG +L  D+  EH  +LERGWV+A AH RGGGE G  WH AGRG  K N+F D+ +CA HL+    T P  L     SAGGL+ G MAN  P LF A+V+K PFL +L+ MRD SLPLTVHE++EWGDP     +   IRSY P EN+R  Q YP++LVT  ++D RV  W+P KWV ++R       +T    +LL++S+ DGH G    L+ L++SAMEM+FL K L
Sbjct:  161 DAQTQELVYAEPDDSFFVDVSQTKDGRFVLINCNSKTTSEIHALA----------------------------SDDARAAPRLLRAREP---------------------GTAYFADHAGDRFFIVTNA---------DDAAN----YKIVTA----------SSATCDVPDVPASSGQWTRFLPEAPDVKIEDVDLFRDFLVLYERVA--SVPRIRVCALA------PGASPAXXX---------------XXXXXXXSPEISSHV-----------VPLPPEHAICRISPGVNRDFAAQSVRFSVSTPLVPEIVYDYDMGSRALQVLKEVPVESAQAAAPAPPRHHTXXXXXXXXXXXRQTQRTPTRXXXXXXXXTQQFDPALYTCERVLVPSRTSLGVDVPLTLVHRRGLARDGQNPTLLLGYGAYGTNLEADFELEHLSLLERGWVVALAHARGGGELGLRWHHAGRGLRKRNTFDDYLSCALHLLDTQVTRPERLAGKGASAGGLVMGVMANEHPALFRALVLKVPFLDILATMRDPSLPLTVHEYEEWGDPRDPT-IGDYIRSYAPCENLRAGQAYPSMLVTGGMHDQRVQFWEPVKWVYKLRQLRAAQKSTNQQLLLLKMSEDDGHFGGGGRLEQLQESAMEMAFLYKVL 710
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: W2PPQ4_PHYPN (Prolyl endopeptidase n=12 Tax=Phytophthora TaxID=4783 RepID=W2PPQ4_PHYPN)

HSP 1 Score: 311 bits (798), Expect = 1.220e-87
Identity = 218/702 (31.05%), Postives = 317/702 (45.16%), Query Frame = 2 
Query:  920 VVGVEWGSSWPPTSRGGGXGGRGDPEVSKYELYYTVPDELRRPWQVRRATLHRRTRTGYSGGXXXXXXXXXXXXXGWRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPSACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPG-------------SPPFDGRDYSCYTVQVASHDE--EMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVRE-QEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTG-----DAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            +  VEW S+ PP                K   YYT  D   RP+ V R                            + + +     ++EE+++AFFVDV +TKD  FV+IN +SK TSE+Y +             G  +D  Q     K ++                                    G  Y+ DHA   F+IVTN             A G   Y++   +       G++ +   +    WE L    +   I+++DLF ++ VLYE   +   PR+RV  L   +   P   P                                                   C + PGVN  ++A   RF +S+P+ PE VYD  +++ ++ +L+ TE+                  FD   Y C    V S       +PLT++HRRD  ++G N  +L GYG+YG +L  D+  EH  +LERGWV+A AHVRGGGE G  W+ AG+G  K ++F D+ +C  HL+  GFTSP  L     SAGGL+ G +AN  P L+ A++MK PF+ +   M+D +LPLTVHE+DEWGDP   + V   I+SY P ENVRE Q YPA+ VT S+ND RV  W+PAKW+ ++R             +LL++++ +GH G    L+ L +SAME++FL + L +
Sbjct:  204 IKNVEWSSAPPP----------------KRVFYYTKVDAHGRPFAVYR----------------------------YNLATHAQELIYEEQDEAFFVDVSQTKDARFVLINCNSKNTSEIYALD------------GQHIDA-QPQLLRKREA------------------------------------GTLYFADHAAGQFFIVTN-------------ADGALNYKIATCQ-------GNSDAKSSIGQ--WETLVPEHEDVKIEDVDLFENYLVLYER--VHSVPRIRVCTLGEQNDDTPHYIPLPKE--------------------------------------------HEICRVSPGVNRDYDAHRVRFQVSTPLVPEIVYDYDMKNRKLHVLKETELTDRSLDIKRHTGKTTKSSFDPEQYICQRCYVPSMSSLGVKIPLTLIHRRDITLNGQNPTLLIGYGAYGTNLEADFELEHLSLLERGWVIALAHVRGGGELGLQWYQAGKGMEKRHTFDDYVSCTHHLLDVGFTSPKRLAGKGVSAGGLIMGYVANEYPQLYQALIMKVPFVDIFGTMQDPTLPLTVHEYDEWGDPTGPK-VREYIQSYAPCENVRENQVYPAMFVTGSLNDQRVQFWEPAKWMYKMRKVQASLPKRDKRLMLLKMTEDEGHFGGGGRLEQLEESAMEIAFLYQALNL 743
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A225X261_9STRA (Prolyl endopeptidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225X261_9STRA)

HSP 1 Score: 311 bits (797), Expect = 1.670e-87
Identity = 205/632 (32.44%), Postives = 303/632 (47.94%), Query Frame = 2 
Query: 1148 WRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPSA---CTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVP----------------GSPPFDGRDYSCYTVQVASHDE--EMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVRE-QEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTG-----DAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            + +++     ++EE+++AFFVDV +TKD  FV+IN +SK TSE+Y +                   GQ   A                                         G  Y+ DHA   F+IVTN             A G   Y++   +          + +   +   WE L    +   I+++DLF ++ VLYE   ++  PR+RV  L   +                              D +SST+                +  P     C + PGVN  +EA   RF +S+P+ PE V+D  +   ++ +L+ TE+                     F+   Y+C    V S       +PLT++HRRD  +DG N  +L GYG+YG +L  D+  EH  +LERGWV+A AHVRGGGE G  W+ AG+G  K ++F D+ +C  HL+  GFT+P  L     SAGGL+ G +AN  P L+ A+VMK PF+ +L+ M+D +LPLTVHE+DEWGDPN  +  E  I+SY P EN+RE Q YPA+ VT S+ND RV  W+PAKW+ ++R             +LL++S+ +GH G    L+ L ++AME++FL + L +
Sbjct:  230 YNLETHSQELIYEEQDEAFFVDVSQTKDARFVLINCNSKNTSEIYALD------------------GQNVHATP-------------------------------QLLRKRETGTLYFADHAAGQFFIVTN-------------ADGALNYKITTCKWN--------TEIVESSVGQWETLVPEHEDVKIEDVDLFENYLVLYER--VNSVPRIRVCNLTEQN------------------------------DVDSSTHY---------------IPLPKEHEICRVSPGVNRDYEAHRVRFQVSTPLVPEIVFDYDMIDRKLHVLKETELTDRSLKLDFNRDKGGRTSKSSFEPEQYTCQRCYVPSMSSLGVKIPLTLIHRRDITLDGQNPTLLIGYGAYGTNLEADFELEHLSLLERGWVIALAHVRGGGELGLQWYQAGKGMQKRHTFDDYVSCTHHLLDAGFTNPKRLAGKGVSAGGLIMGYVANEYPQLYQALVMKVPFVDILATMQDPTLPLTVHEYDEWGDPNGPKAHE-YIQSYAPCENIRENQVYPAMFVTGSLNDQRVQFWEPAKWMYKMRKVQASLPKRDKRLMLLKISEDEGHFGGGGRLEQLEENAMEIAFLYQALNL 743
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A3F2RFS9_9STRA (Prolyl endopeptidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFS9_9STRA)

HSP 1 Score: 306 bits (784), Expect = 3.170e-86
Identity = 203/620 (32.74%), Postives = 302/620 (48.71%), Query Frame = 2 
Query: 1178 VFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPS---ACTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPG--------------SPPFDGRDYSCYTVQVASHDE--EMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVRE-QEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTG-----DAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            ++EE ++AFFVDV +TKD  FV+IN +SK+TSE++ +                        AAK      R                                G  Y+ DHA D F+IVTN             A G   Y++   +      + ++ S+       WE L    +   I+++DLF+ + VLYE   ++  PR+RV  L                                    E + N +SE            +  P     C + PG+N  +++   RF +S+P+ PE+VYD  +    + LL+ TE+                   F+   Y+C    V S       +PLT++HRR   ++G N  +L GYG+YG++L  D+  E+  +LERGWV+A AHVRGGGE G  W+ AG+G  K ++F D+ +C  HL+  G+T+P  L     SAGGL+ G MAN  P L+ A++MK PF+ +L+ M+D +LPLTVHE+DEWGDP   +  E  I+SY P ENV+E Q YPA+ VT S+ND RV  W+PAKW+ ++R             +LL++S+ DGH G    L+ L +SAME++FL + +R+
Sbjct:  193 IYEENDEAFFVDVSQTKDTRFVLINCNSKSTSEIHALDGH-------------------DVAAKPQLLRPREA------------------------------GTLYFADHAADQFFIVTN-------------ADGAFNYKIATAKT-----KATSPSI-----GQWETLVPEHEDVKIEDVDLFKEYLVLYER--VNSVPRIRVCKL-----------------------------------DEQNANDASELHY---------IPLPEEHEVCRVLPGINRDYDSHHVRFQISTPLVPENVYDYDMMHKELRLLKETEITDHSMKERYNSAGKLMKSSFEPELYTCQRCYVPSMSSLGVRIPLTLIHRRGITLNGQNPTLLIGYGAYGINLEADFELEYLSLLERGWVIALAHVRGGGELGLQWYQAGKGMQKRHTFDDYVSCTHHLLDAGYTNPKRLAGKGVSAGGLIMGYMANEYPQLYQALIMKVPFVDILATMQDPTLPLTVHEYDEWGDPTGPKAHE-YIQSYAPCENVQENQVYPAMFVTGSLNDQRVQFWEPAKWMYKIRQVQASLPKKDKRLMLLKMSEDDGHFGGGGRLEQLEESAMEIAFLYQAMRL 693
[Close]
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Match: A0A6G0R5H3_9STRA (Prolyl endopeptidase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R5H3_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.680e-85
Identity = 207/622 (33.28%), Postives = 301/622 (48.39%), Query Frame = 2 
Query: 1178 VFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEVYLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEAATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMDLFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCXXXXXXXXXSSDGESSTNISSESSRDCDFKGRGGVATPSA---CTLRPGVNSWFEARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEV----------------PGSPPFDGRDYSCYTVQVASHDE--EMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHACMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAEGFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDTSLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVRE-QEYPALLVTASVNDNRVNVWDPAKWVSRVRAANTG-----DAPVLLRVSDTDGHHGPDNTLDGLRDSAMEMSFLEKYLRV 2962
            ++EE+++AF+VDV +TKD  FV+IN +SK TSE+Y +                   GQ       D D    +                              G  Y+ DHA   F+IVT+             A G   Y++   +        ++SS+       WE L    +   I+++DLF  + VLYE   ++  PRLRV  L                                  DG+S      ++  D  +     +  P     C + PGVN  + A   RF +S+P+ PE V+D  +++ ++ +L+ TE+                P    FD   Y+C    V S       +P+T++HRRD  ++G N  +L GYG+YG +L  D+  EH  +LERGWV+A AHVRGGGE G  W+ AG+   K ++F D+ +C  HL+  GFT+P  L     SAGGL+ G +AN  P L+ A+VMK PF+ +L+ M+D +LPLTVHE+DEWGDP   +  E  I+SY P ENVRE Q YPA+ VT S+ND RV  W+PAKWV ++R              LL++ + DGH G    L+ L +SAME++FL + L +
Sbjct:  248 IYEEQDEAFYVDVAQTKDARFVLINCNSKNTSEIYALD------------------GQ-------DIDARPQLLRPREA------------------------GTLYFADHAAGQFFIVTD-------------ADGALNYKIATSKWNAQASEPTSSSV-----GRWETLVPEHEDVKIEDVDLFEKYLVLYER--VNSVPRLRVCSL----------------------------------DGQS------DADSDAHY-----IPLPKELEICRVSPGVNRDYVAHRVRFQVSTPLVPEIVFDYDMKNRKLHVLKETELTDRSIKHERKRDAGQKPTQSTFDPALYTCQRCYVPSMSSLGVKIPMTLIHRRDITLNGQNPTLLIGYGAYGTNLEADFELEHLSLLERGWVIALAHVRGGGELGLQWYQAGKAMQKRHTFDDYVSCTHHLLDAGFTNPKRLAGKGVSAGGLIMGYVANEYPHLYQALVMKVPFVDILATMQDPTLPLTVHEYDEWGDPRGPKAHE-YIQSYAPCENVRENQAYPAMFVTGSLNDQRVQFWEPAKWVYKMRKVQASLPKRDKRLALLKMGEDDGHFGGGGRLEQLEESAMEIAFLYRALHL 754
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.68.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDG3_9PHAE0.000e+062.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTR5_ECTSI1.220e-19959.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTR4_ECTSI3.750e-14684.92Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosu... [more]
A0A1V9ZTT9_9STRA1.170e-9537.87Prolyl endopeptidase n=1 Tax=Achlya hypogyna TaxID... [more]
A0A835Z9Z8_9STRA2.260e-9230.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6YEZ7_9STRA3.200e-8835.31Prolyl endopeptidase n=1 Tax=Pythium brassicum Tax... [more]
W2PPQ4_PHYPN1.220e-8731.05Prolyl endopeptidase n=12 Tax=Phytophthora TaxID=4... [more]
A0A225X261_9STRA1.670e-8732.44Prolyl endopeptidase n=2 Tax=Phytophthora TaxID=47... [more]
A0A3F2RFS9_9STRA3.170e-8632.74Prolyl endopeptidase n=3 Tax=Phytophthora kernovia... [more]
A0A6G0R5H3_9STRA1.680e-8533.28Prolyl endopeptidase n=2 Tax=Phytophthora fragaria... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:297430..312971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTR5
PFAMsPeptidase_S9_N
Model size3952
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons12
Evalue1.59e-204
EggNOG OGsCOG1505@1|root,KOG2237@2759|Eukaryota
Descriptionserine-type exopeptidase activity
Cds size2934
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791717.3007295-UTR-P-littoralis_Contig85:297429..2981561680791717.3007295-UTR-P-littoralis_Contig85:297429..298156Pylaiella littoralis U1_48UTRP-littoralis_Contig85 297430..298156 -
1680791717.3120353-UTR-P-littoralis_Contig85:298209..2984211680791717.3120353-UTR-P-littoralis_Contig85:298209..298421Pylaiella littoralis U1_48UTRP-littoralis_Contig85 298210..298421 -
1680791717.458903-UTR-P-littoralis_Contig85:312892..3129711680791717.458903-UTR-P-littoralis_Contig85:312892..312971Pylaiella littoralis U1_48UTRP-littoralis_Contig85 312893..312971 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791717.3294406-CDS-P-littoralis_Contig85:298421..2986501680791717.3294406-CDS-P-littoralis_Contig85:298421..298650Pylaiella littoralis U1_48CDSP-littoralis_Contig85 298422..298650 -
1680791717.3395817-CDS-P-littoralis_Contig85:299245..2994391680791717.3395817-CDS-P-littoralis_Contig85:299245..299439Pylaiella littoralis U1_48CDSP-littoralis_Contig85 299246..299439 -
1680791717.354349-CDS-P-littoralis_Contig85:299991..3001291680791717.354349-CDS-P-littoralis_Contig85:299991..300129Pylaiella littoralis U1_48CDSP-littoralis_Contig85 299992..300129 -
1680791717.3640406-CDS-P-littoralis_Contig85:300743..3009181680791717.3640406-CDS-P-littoralis_Contig85:300743..300918Pylaiella littoralis U1_48CDSP-littoralis_Contig85 300744..300918 -
1680791717.376515-CDS-P-littoralis_Contig85:301164..3012721680791717.376515-CDS-P-littoralis_Contig85:301164..301272Pylaiella littoralis U1_48CDSP-littoralis_Contig85 301165..301272 -
1680791717.3861902-CDS-P-littoralis_Contig85:301625..3027401680791717.3861902-CDS-P-littoralis_Contig85:301625..302740Pylaiella littoralis U1_48CDSP-littoralis_Contig85 301626..302740 -
1680791717.3979318-CDS-P-littoralis_Contig85:303010..3031551680791717.3979318-CDS-P-littoralis_Contig85:303010..303155Pylaiella littoralis U1_48CDSP-littoralis_Contig85 303011..303155 -
1680791717.4121997-CDS-P-littoralis_Contig85:303847..3041491680791717.4121997-CDS-P-littoralis_Contig85:303847..304149Pylaiella littoralis U1_48CDSP-littoralis_Contig85 303848..304149 -
1680791717.424662-CDS-P-littoralis_Contig85:304865..3050901680791717.424662-CDS-P-littoralis_Contig85:304865..305090Pylaiella littoralis U1_48CDSP-littoralis_Contig85 304866..305090 -
1680791717.4359536-CDS-P-littoralis_Contig85:305801..3059281680791717.4359536-CDS-P-littoralis_Contig85:305801..305928Pylaiella littoralis U1_48CDSP-littoralis_Contig85 305802..305928 -
1680791717.4490805-CDS-P-littoralis_Contig85:312716..3128921680791717.4490805-CDS-P-littoralis_Contig85:312716..312892Pylaiella littoralis U1_48CDSP-littoralis_Contig85 312717..312892 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.68.4prot_P-littoralis_Contig85.68.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig85 298422..312892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig85.68.4

>prot_P-littoralis_Contig85.68.4 ID=prot_P-littoralis_Contig85.68.4|Name=mRNA_P-littoralis_Contig85.68.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=978bp
MAASCFSVWAVRAARNVRLLRPRVRPRGQIPTAALRWRSTSTPPSSAAER
SSAVAINERSTRAQKPPTPRRLPPDTSRRGGDDEYRWMHDTGSEEMLRHM
EHENRYSAACLKPLRRRASALFRRMVDRQPEEEGGARRSVPERLGGYLYY
TRRDDGKGFPVYVRRPVEGTLHDEQVVFDLNEIEEHGLRTGSGGHGGDHG
GGGAKGDPDHVPPTPALGSMKLSPDQRMLACTIGVDGSDRFVLAVFDLLG
GLGGEGRSGSGNAHRGPTAAVLSEDAIWDDVVGVEWGSSWPPTSRGGGGG
GRGDPEVSKYELYYTVPDELRRPWQVRRATLHRRTRTGYSGGGGEEPEGG
DAGGGGWRVDSAGDRTVFEEKNDAFFVDVGRTKDHSFVVINVHSKTTSEV
YLIPTATGTAGASDAGGGRVDVGQGTTAAKGDSDEERSVVNGGNSDGAAP
RGHHHHRAGPALLLRRRQQGVEYYVDHAGDAFYIVTNSPPSGAGDGQNEA
ATGVGEYRLVRVRQPPGRRRGSASSLEGVADAPWEALPCGGDGCTIQEMD
LFRSHCVLYESSALSGCPRLRVVPLAASDGTRPGSSPFAVSPPAAGGCSG
GGGNTGASSDGESSTNISSESSRDCDFKGRGGVATPSACTLRPGVNSWFE
ARTARFSLSSPVAPEDVYDLCLESGRMDLLRRTEVPGSPPFDGRDYSCYT
VQVASHDEEMVPLTIVHRRDTQVDGSNRLVLHGYGSYGMSLPIDYHPEHA
CMLERGWVLAFAHVRGGGERGKAWHAAGRGPNKWNSFWDFQACADHLIAE
GFTSPSALGAHVNSAGGLLAGAMANFRPGLFSAMVMKAPFLGVLSAMRDT
SLPLTVHEFDEWGDPNSSEEVEAMIRSYCPYENVREQEYPALLVTASVND
NRVNVWDPAKWVSRVRAANTGDAPVLLRVSDTDGHHGPDNTLDGLRDSAM
EMSFLEKYLRVQAKNGASSATPAQQYK*
back to top

mRNA from alignment at P-littoralis_Contig85:297430..312971-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig85.68.4 ID=mRNA_P-littoralis_Contig85.68.4|Name=mRNA_P-littoralis_Contig85.68.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=15542bp|location=Sequence derived from alignment at P-littoralis_Contig85:297430..312971- (Pylaiella littoralis U1_48)
CTGGGTTGTCCAGTGGTCTTGCTTGACACGACGACTACAGCGGCTAGCTT
GGCCGACTGGTATCAGTGGTCTCGGGGACATGGCGGCCTCGTGTTTCTCT
GTGTGGGCGGTGAGAGCAGCACGGAACGTGAGGTTGCTTCGACCTCGTGT
TCGACCGCGCGGACAAATACCAACAGCGGCCCTGCGGTGGCGGTCGACGA
GCACACCACCCTCCTCTGCTGCTGAAAGATCTAGTGCCGTTGCCATCAAC
GAGAGGTTCGGACATTGCTGTACACTAGGGTTTGTTCGTTCTTGCGTGGA
GGCCTGTTCAAGTGTTGCGTTCATTTTCAGCACCCAGTAGCACAGCAAGT
GAATCCTCATGATAAATGCCAAATCGAGAAATCCATAACGTATCATATCA
TATCTACACATACAAGGTATTTCGGCGGCTGACGCCGCCACGGTCATGAC
CGAATCCAAGACTAAGTGGGAGGGTGTGACACAGAAGATCGAACATGTAA
CGTACGTACGTGTGTGTGTACAGCGCGACCGACATGCACGAACGGTTGCG
CCAAACATGTACCCGTAAGTGCAGGGGGGGACGGGCCTGGTCATATCAAC
CAAGTGGTTCGGACACGAAGGAGGGAAGAATGAAAAGTCTCGCGAATACG
AAGATGAAGATGAAATATTTATTCGCGACCATATCCATAAAGGGGTTTCC
AAGATGGCGTGACGCACATGCCGTGCGAGCAACGACAGAGGCCTGGTAGC
AAAATTTATCGCAAGCCAAACTGTGTGCAGCAAGTGCGCACACCGCGGAC
AACGCGAAAAAATAAGGGAAAAAAAAGCAAAACGTAAATAAATTGGACAG
CCCCACATCATCATGGTTTTTTTCAGCCCTATCATGCACAGGTGGCCACT
GGGACACTTTGTCGCAGGTTATGCATATGGCCCAACCTAGGAAGGTTGTG
GAAGGTTGGGGGTGGTTATGGGAGGACGGAATCGACCTGAACCCTATATT
TTTTCTTTGAACCCAACAATATTAGTACTAATATTTTTGATGCAACCAAC
AGGGCGGGCTGGCAGCACAGAAAAAAAGGTTTCAGGTCGATTCCGTCCTC
CCACAATCACCCCACAACCCTTCACAACCTCTGTGCGTTGTGAAAAATGA
TTAGCTGCCATAACGTGTCCCGTGGCCACCTGTACTGTGTGACATGCACA
CACCGTGAAAGCAACGACAGAGATCCAGGAGCAAAACAAAAAAATCTGAA
AAGCCAACAACGTGGCCAAACCAGGAAGGAGGCAAAGCACAAGCTTTATC
AAAAGTCAGAAGCCCGGAGGCCAGTCACACCACCGCTGGTTGGTAGGCAC
GGAAGAACGAAGGCTCGTTACACCAAGAATCACGCCACAAATAATAATGC
AAGAAGATAAGCAGACAAAAAAAGGCAAAGAGGCCAACACCTGACCCAAC
TGTTGTGAATATGGAGGCCACACCAGAGGGAAGGCAACGCACGGTCCTAT
TGAAACATTCGAGAACAGCGACGCCGTCGGAAGACACGAACGAAAGAACG
ATGAATCGGAAAGACGCGGAAATACCGGCAATATCCTACTACTCCTCACA
GACCGCACGTTATGGAAGCCAAATATTTTTCTTGATATTGAGTTTTGGTG
GGGGCGAGGGTGATCCAAGAAAACTTTCTCCGTGTACACCTGGCACGGGG
ACAAAAAGTCGCCTTGGAATCTTGAAATTTTTTGGATCGAGATATCGGGA
TCGCGAGGCTGGGTATTTGGGAAAGTTGGACAGATTTTTTGGGCGAGCCA
CACCTCCTCGAAAACTCTACAAGTAGATGAGAGGATTATTTTCAATTCAG
GTGATGCAGCGGCTGCGTTGCGAACGCCAATCCAAAACTTGTTTGGAGGG
GGGGGGTCGATTGTGCCGCTCCGCACACATGCACACATCACACGTACATG
CTGCTGGAGACACAATCATCGACAACACAAGAAATATACAGAACGTAGCG
CGCTCATCAAGGGCTCGGAGCAACCCTTCGTGCATTGCCTTGCCAACCTG
GCCACTGGCCGGTGGCGGTCGTTCTTGAGGTGTGCGAATAAAACATTTGA
CCACAGGCATGAAGCTGGAGATGTCAAGCAGCATTTTTGAGGCCCACTGA
ACTGAACCAAAAAAGACAGCTTTTCAACAGACACCCGAGCACACCACACT
CGATTTCTCGCTGCACAGAGCACATATCACGCCGAAACCTGGAAGGGTAA
GAGCTCCACTCACTATGTACGGCCGATACGGCTTTGGTTTGGCGGTGGGA
TCATTCAATCAGTAGCAGCGTTGTGTATCGAACATCTGTTCGGAACATGA
TTTTCAAGGCAGCAGACGAAGCCCTCTATTTTCAAGAGAGAAAAAAAAGA
CAGATTCTGTTTTTTTTTAAGCTCACGCCCTCGAGCGCTGCTACTCCTTG
CTGGTTGAATGACCCCACCGCCAACCCAACGCTCTGCTGGCGGTAAGCAG
TTAGTGGAGATCCCACCCTTCTAAGTTTCAGGTTGGTTTGTGCTCGATGG
AGCGAGAAATCGAGTGTGGTGTGAACGGATGTCTGTCGAAAAGTTGTCTT
TTTTGTTCTGTGGGCCTCAAAAAGGCTGTTTAACATCTCCAGCTTCCAGC
CTGTGGTCAAATGTTTTTTTTGCACGCCTGAAGAACGACAGCTGGCTACC
GTCCAGCGGCCAGTTGGGCAAGGCAGTGTTCGTAGGGCTGTGCCGAGCCC
TGGATGGGCGCACCACGTTCGCTACTTGTGGTGTAATAATGGGTGGCTAG
TCAGAGTGCGATGAGATGGGCCACTCATTCATGCCACCCTTCTACAACAT
CAAGATATATTATATATACTCCTACAGCAAGTGGTAGTAGATTCCTGGAC
GAGAAGCAGCACGGACAGACAAACGCTAATTTTGGAAATGCAGAGCCCAA
ATCTTTGGGGGGGGGTACGGAAAGATTAAGAAAAATATTTGGCTGCCATA
ACGTGCGGTCTCACGTGGAAAAATTAGTCCTGAAGAAACTGTTTGATGTA
TACGACACATGAATATGAACAATATGGAACGACTCGTATTGTTCCTGACG
TGCACGAGAGGTATACACGTACTTTTCACGGGTGAGGGGTATCAATATGG
CTTTCGCATGCCTAATTACGGGTGAGGGGTATCATTATGGCTTTCGCATG
ACTAACTGGTAGGGGGTATACACGTATATTGTTACGTGTTAAGGGGTAAA
TAATATGGTTTTGATTCTTCGTGACATGTCGGGGGTGGATTATAGTGGCC
TGTTGCCCTGCTGTGAGTGAAATAAATAGAAGAGAGGTCGTCAGGTCTGG
TCGCAAGGAGCCTGCTTGGAAAATATCGTGCCTTGGAATTTGTTTTTCGC
GTGATCCATATGTTTGAGGTGAGATTGAATATAGAGGACTACACCAACTC
TTGACACAATGTCGTGTGTTATTTCTATATGCTGTGACGCTGCCGTGAAG
GGCATGCTGTGTAAGGCGTACTGCCCTGTATATATCCTTGCTGTGGAGGT
CGGGGATATCTCTATCTGCTGTGAGGGATACACGGTATATATCAAATAAT
AATGGTGAGCTGTGAGTTGGGTCACATGAACCACGACTTCATCTGCGAAA
ATTTGGAAGCTCGCGAAATATGGGTGAAATTGCAGCGTTCTTTGATCAAG
TAAAAAATGAGATGCAGACATTGATTGAGCTCGTATCTGACTCCTGTGAA
GGGTATACCGCTCCTGTATATCCATGCTTGCTGTGAAAGAAGGTTCTCAC
TGTGAAGGGAGTGGCTGTGCCTTGATGGGCATTATTGAGGCAGGCTGAGG
AATGCTGTCATGGTGAGCTGTGAGTTGGGTCGCATGAACCACGACTTCAT
CTGCGAAAATTTGGAAGCTCGCGAAATATGGGTGAAATTGCAGCGAGCTT
TGATCAAGTAAAAAATGGGGTGCAGACATCGAGCTCGTATCTGACTCCTG
TGAAGGGCATACCGCTGCTGTATTTCTATGCTTGCTGTGAAAGGTCCTTA
CTGTGAAGGGAGGTAGGTGGCCGTGCCGTGATGGGCATCATTGAGGCAGG
CTGAGTGAGGCATGCTGTCATGGTGAGCTGCGAGTTGAGTCGCACGAACC
ACGACTTCTGCGAAAATTTGGAAGCTCGCGAAAAATGGGATGCAGACATT
GAGCTCGCCTGAGCGTCCCAGCGGAAAGCACACGTGGTCCCGCCCCAGTC
TAATTTCAAGTGAAAATGGAATGGAGGCCTCTCAGCGATCGGAATGCTGC
GATATGGGAGAATTCGTAATGCGTATAATAGCTATGATATGACGTTTTAC
AAGTTCTCCCATCTGAAGATCGCATTTCAAGAGATACTACACGCCCGCTG
GACCAATTCACAAAGCTCCGTTACTCCTAGAGCAGAGCAGAAAGAATACT
GTTCCGGTGCCGAAAAAGAGCGGCATCGGAACCAGCCATCTCGCCAAGAG
CTTTCCGAGCACGTGCTTGTTGGTGCTTCCATAATCTTCTGATTGTTGTA
TAGGAATAATCGAGCTTTGAAAATCGATCTAAGGGATCCCGCGGTATCTT
CGTCACATCCGGTACGGATGTACTTGTACGCATCGTGTATGATATCCCAA
ATTGTCTTGTTGAGCCTGACAACCTCAGCGGAGCTGCAACAGTAGTTCTT
CATCTGATGAGTTGTAGAAACACAGGCAGATACATTTCTCTCTGTGATCG
GTGCTAATTTACGCTACTCTAGATCCTCGCCCAGAGCGAGGCGAACTCAT
TGATGTCTCTGCAGGAAAAAAAAAAGAAAAAGCGGTCCAGGGGTCCCGCG
GTATCGTACGTCACATTCACGCATCCATACGTATGATGTTCGCTCGCAAG
ATCGGTCCACACTCACTCTCTGACGCCCGGACCGAAAAACTCACGTTCGT
TCCCGTAGCTTACTCTACTGCTGACTCGTAGTGCCCAAAATTCATGTCCG
CCATCCACAGCAAGATCGATCGACGTCCTTTTCGTGAGAGCAATCATGAA
TCATGACGCCCTGCCTCTGACGCTCTCTCTATCTCTCTCTCTCTCTCTCT
CTCACACACACACACACACGCACACACAAGGCGGCAGGTATGCATGATAT
TGTGAAGAAAAAGAGCACGGCATTGAAGGTATCTTGCCTTTGAAACATGC
TGTGCACCTGTGTGAAATCTTCAAATCTTCAAAATTTTCGAAATTTTCAA
CGTCCTTTGAACAACAGCAACCTGCAGTTTGTCCTGGCGAAACATCAGCA
CCAATACTGAGCATTGAGCATGTGTCTGCACGGGAAGAAAACATGATTAA
TGATCATGGATATTGATACCGGTAACAACTGATAACGATTGGCATTTAAG
ACCAACGAAATCATCCGCCGACAAAATGGACCCGCACAAACCAGGCATGA
GATTGATTTTGATTTTGGTCACAGCACTCGAACAGACAAACACACTATTC
TCTACGCATCATACGACACGTATAGTGTGGGACCTGACATTAGAGACACC
ACCCCCCGGTGATACCTGGTACTATTTTTTGGGGGTTTCGAAAAATATTA
CCCGGGGTGGTTTCTAACAGAAGAGTTGGGGGGGGGTATACTGCTGTAGT
ATCTACTTGTAAGGCAACCCGAACACTGGATCTGAGACTGCTTCTCCTAT
TCGGATGCATTTCGAGCCATCAAAAGAGAATCAACCGGTGTGGTTTTTTG
CAGGGATGGTTGGGGGGGGTGATTTCGTACAGCATGCGACCGACGTGATG
TGTTTAATCCAAACTAGAGTAAAGTACTGCTGCTGCACTGCTGTACGTAC
ATTTACTCAGAAAAAAGAAGAGACCTCAGCTTGGGAGCTGCCCTGCTCCT
TTCGCAGTCCCGGCAATGGGAGCCATGGGAAACGAATATGGCGCTCCTGC
CATACTTGCCCTAGCACACCAGTAGCTGCGTGGGCTCGCTGGCGGGTTGG
GGGTGGCACCGGCAGCTATGTAGTAAGGCTGGTTTCGATACCGTTGCTGT
TGTTGTTGTTGCTGCTGCTGCGGCGGCGGCGGCGGCGTTGATGCACCGAG
GGATGGAACCGCTTGTTGATTGGTGTATCAGCGCGGGCGTCCATCGAGGA
CGATGTAGCTTGCGCGACGTCGGCCTGCTGGTAACCCTGTTCATTCTACT
CGCTGGTTCGCCCATGCTTGCTAACTCGGTCAAGCCCTAGGAGGTGCTTT
AAACGCGTCTCTTTCTGTGAGGTTGTGCCTCTTGCGCCAGCGTCAATGTG
GTTGTCAGGTGCCCAACGAACAGCCCACGTGGCACCCTAAACTTGTTCCG
ATTCGCAGTTGGTCATTGGCCCGAATAACAAAAAAATACTTTGTTTGAAA
CATGCGTACTTCGTATATCGTACCCTCAACAGAATACCCTACCCCAACGG
CTTTGCAACTATGTTCACAATGTCGTGTTGCTTCCATAGTTATCCATAGT
ACTTTTTGACATACCTCCCCATTTTTGCTCCCAGGTTGTTTTTTGTGTGC
GTGTTCGTGATATTTCGTGATTTCCGTATGGTATGTACTCGTAGATATAT
CAGGTGCTGTTGTGCATCATGAAAATAGATAATATGCAAAACCAGCAGTC
TGCCAAAAGTTCAGGTCCTGCGACTGTGTTCCTGTATGAGGGCTGAGTCT
ACTAGTTCGCAACATATACTGTAGGGTTTCCCCGACTCTATATGCTGCTT
GACCTGGCAGAGCTATGCGGGGGAATTACTGTAATGTTCCTGTGTGTTTT
TACACGTGCTTTTGTTCCCCTCTATCCAAAACTCGACGCACCCCTCAGAG
TCCCGTCTGTTTTCGGGTGGATGTTCCTTCTCGACTGTTTTTCTGATTTT
TCGTAGGACGCAAACGTGAGTGCGTCGATGTCCGACGGCGCAAAGTATTT
AGTATATCATTCATTTCGACGGCACGACAGTGATGAATCTCTCTTTCTCT
TGTGCCCGCTCTCTCTCTCTCTCTTCTCTCTCTCGACTTGCAGAAGTACT
CGAGCACAGAAGCCTCCGACCCCACGTCGGCTACCGCCAGACACCAGCAG
GAGGGGAGGGGACGATGAGTACCGATGGATGCACGACACCGGCAGCGAAG
AGATGCTCAGGCACATGGAGGTGCGTCCGTCCCCGAGCTTCACTGACTGA
CTGCGACCCACCGAGTGAACCTGAGTAAAATCGCGCCTTGACTTCATTCG
AAGGAAGCCCTTCAGGGAGCAGGAACAGGCGCGGTCGGTCAGATTGCTCT
TCTCAAGAGCGAAGGCGAGTCGAACGTAACGCAAGGATGATACCAGGCTC
GATTGGCCGCTCGTGCGCGGCAAGCATGGCCGCTCTGGAAAGGTGTGACA
CGCGCCGTGGTTACGCATTGCACGTGCTCGCGGACAAGCACCGGCGGCGA
AGTCATGCCACAGTAGGAGCAGTGCAAAATATTTTTTTATCACTACTTCC
TGCTGTGCCATCATCGGCCGCAAGTGTTGGCAAGGCCCATTGCCATTACA
GCAGTAGTGTCGTCGCTTCTTGTATCCTACCCGAACCCGGCGCTCATTCG
TCGTCAGGCTTCAAGCTTTGTTTGGGCGACTAGATTGGGTGGAAAACGGG
TAGGGCCAGAAGGAGGGGAGGCGGGAGGGGCGCGGTGCAGGTACCCCAGT
ACAGCAACAGGTCCTCATGGGAAGTGCCGCTTCGAAATAAAATAATGGGG
GAGTGAAACGGGAAAAGGGGACAGGTGGGCGGGACAACATCCATCCCCAC
CGCCCCTTTCCCTTTTCCCCTGCCCCGCCCGCTGCCGTGAACGCCTGCTG
TACATCCAACTTGACACAATTATTCACGCAGCACGAGAATCGTTATTCCG
CCGCGTGTTTGAAACCGCTCCGCCGACGCGCGAGCGCGCTGTTCCGGCGC
ATGGTGGACCGCCAGCCGGAGGAGGAGGGTGGAGCCAGGCGCAGCGTTCC
CGAGCGTCTGGGGGGCTACCTGTACTACACGAGGCGAGACGACGGGAAAG
GGTTTCCTGTGTACGTCAGGCGGCCTGTGGAGGGTACGCTCCACGATGAA
CAAGTGGTGTGTGGCGACGAGGATCGGGGGGGGGGCGAGGATGTGCTGTT
TCGCTGATTGGTTGCCCTTTATACACTTGAGTCGGTTCGGGGTGTCACAC
CTGACGAGGGCGGTTTTGGCGCGTATGTTCGGTGTTCCAGAGTTCCAGAA
GATGCGAACGAAATGTGTGTCCCACATTGCAGAAAGTCATTTTGGAAATG
GTCTCGGTTCGTTCGTGTAGAGATGAAACAAGGTTTGTCGCTCCAACCAT
CTGGGCAGACGTGGAGTGACGCCGCCACACGAACCAACTCTTGGTTTCGG
TGACCGCCCCTTAATCGCACGCTCCTCGAGGGACGGACGGACGAAATCAC
GGGTTTCCCTCGACTTTTCCCGCCGCAAGAAACACCGCCATTCGCCGGCA
ATATCTGCGCAGCCCAGCGACGTGTGCCTCTATGTAGCAGGGAGACTACC
GTGCAGCAGCAGTAGCACCTCGCAGCACCTTGCACCCCGCGCGCCTGCAC
AGTGGTAGTGCGGACAGTGTGGGAAAAACAGGCGAGCACCGCAAAACGTT
CCGCTAACGCGCGTACGCCGGTGGGACAGCAGCCACGGCAAAGATTGCGC
TCTTGCCCATGCAAACACACCGGTGTTTATTTGTTGGTTAGCGGGGGGTG
CACTCGGAAACCCCCGTCAACCTGTCTGTGTGCGTCGCCCCCCACCTTTC
TCCTCCTCCTTCCCCTCGTCAGGTGTTTGACCTGAACGAGATCGAAGAGC
ACGGTCTCCGCACCGGCAGCGGCGGGCACGGCGGTGACCATGGTGGCGGC
GGCGCGAAGGGAGACCCCGACCATGTGCCCCCGACGCCCGCGCTGGGCTC
CATGAAGCTCTCGCCCGACCAGCGGATGCTCGCGTGCACGATCGGCGTGG
ACGGGAGTGATCGGTTCGTGCTGGCGGTGTTCGACCTTCTCGGGGGGCTT
GGAGGGGAGGGGAGGAGCGGCAGCGGTAACGCGCATCGGGGGCCGACAGC
GGCTGTGCTGTCGGAGGATGCCATGTGAGTTGGGCGGGCGAGAGGTGTGA
ATGGAGCGTTTCTCTTTGTGTGTGTGTTTTGTATGGGCAAGGAGCTGTTT
GTTCGTTCGTTCGTTCGTTCGTTTGTTTGTTTGTTCGTTTGTTTGTTTGT
TTGTTTGTTTGTTTGTTTGTTTGTTTTCCCGTGGCTCTACACACGTTTTG
TTGTTGCCCGGGTGACGATCGGTTCTGTTTCTCGCAGAGTGTGCCAGGCA
TGGTTCGGAGAATTTTTTCAGCTGAAACTATCGGTCGGCGGTTGCACGCG
CGTGCAGGGAGTGATGTACTTCGAGTACGTTTGATAGGCATTTACTGCAG
AAATGTTGTTTTCCCCCTACCGGAAGGCCGACACTTTTTTTTAAGTCGAC
AAGTGCCGAGCTCCAGCTGGTCGCGCAGCCCCGTTCATTCTATTTCCCCG
CTGGACCTGGTGGAAAGTTGCACAGCACGATGATCTGAGTCTGTTGGTCT
GATTGTTTCCTGCATAGCGCCCTCCCACGTCCGCGCTTCTGCCGGGAGGT
CCGCCGGCTGAGCGTCGAACCTATATCGATGCTTGGCATGACCGTCGCTT
TTTATTTTGTCGGCACCTTTGCTTGCTGTGCTTTCCCGCTCACAAAATTC
GCCCCCCAACTATGTATGCCATCCATGTGTCGTCGGCGGCGGCGCATCGC
GCGGCTGTTGTTTTAGCTGGGATGACGTCGTGGGTGTCGAGTGGGGATCG
AGCTGGCCGCCTACCTCCCGGGGCGGCGGCGGCGGCGGCAGGGGCGACCC
CGAAGTTAGCAAGTACGAGCTGTACTACACGGTGCCTGACGAACTCCGAC
GGCCGTGGCAGGTGCAACGCCGCAAGCGCAACGTGTGCTCCGTTTTTAGA
CCTCCTCGACAAACGAGAGAGCCCTTTTCGAGCCCATGTACTGCGTTGAC
CTAAGGGCCACGACGACCCCGTGCAAGCAAGCCTGTTTTGATTGACGTGC
TGTACGTGCATAGCACATACTATATGGAGCTCCCTCCGTTTCAGCACAGC
AGTTCGATCGGCCGGCTGATATGTTTCATCTTCCGTATGCCCGGCGACGG
CGCATTTTTACATGGACGGACCTTGGAATAGGTTCGGCGTGCCACACTAC
ATCGGAGGACGAGAACAGGCTATTCAGGAGGAGGTGGGGAAGAGCCTGAA
GGTGGGGATGCAGGTGGTGGGGGCTGGAGGGTAGACTCTGCGGGCGACCG
CACCGTTTTCGAGGAGAAAAACGACGCCTTTTTCGTGGACGTTGGGAGAA
CCAAGGACCACTCCTTCGTTGTGATCAACGTGCATTCCAAGACCACTTCA
GAGGTTTACCTTATCCCGACGGCGACGGGTACCGCTGGTGCCAGCGACGC
AGGGGGCGGACGCGTCGACGTAGGGCAAGGGACAACGGCGGCGAAGGGCG
ACAGCGACGAAGAACGCAGCGTGGTGAACGGCGGGAACAGCGACGGCGCT
GCTCCTCGTGGACACCATCACCACCGTGCTGGTCCCGCGCTGCTGCTTCG
CAGGAGGCAGCAAGGCGTGGAGTACTACGTCGATCACGCTGGCGACGCCT
TTTACATTGTTACCAACTCTCCGCCATCCGGAGCTGGAGACGGGCAGAAC
GAAGCGGCGACCGGTGTGGGCGAGTACCGTCTCGTCCGTGTGCGGCAGCC
GCCGGGACGACGGCGGGGGAGCGCCTCGTCCCTCGAAGGCGTCGCCGACG
CACCGTGGGAGGCACTTCCGTGCGGAGGAGACGGGTGCACGATCCAAGAG
ATGGACCTGTTTCGGAGCCACTGCGTTCTCTACGAGTCCTCCGCGCTTTC
CGGGTGCCCTCGCCTGAGAGTGGTCCCGCTTGCGGCCTCCGACGGCACGC
GTCCCGGCTCGTCGCCGTTCGCCGTCTCCCCTCCCGCCGCCGGTGGATGT
AGCGGCGGCGGCGGCAACACCGGTGCCAGTAGTGATGGCGAAAGCAGCAC
CAATATCAGCAGTGAAAGCAGTAGGGATTGTGACTTTAAGGGCCGGGGTG
GGGTGGCGACGCCGAGCGCGTGCACGCTAAGACCGGGGGTAAACTCGTGG
TTTGAGGCTCGAACGGCGCGGTTTTCGCTGTCGTCGCCCGTGGCGCCGGA
GGATGTCTACGACCTGTGCTTGGAGTCTGGGAGGATGGATCTGCTCAGAC
GGACAGAGGTGCCCGGTAGCCCGCCCTTCGACGGCCGTGACTACAGGTAG
GCATGCGCCAAAAGATTTGGGCGGGACTGCCGGGAGCGGTAATCAATATG
GAGTATTTTTTTTCAGAAATGTCGTTTTTATGAGCGAAAAGTTTTCGATT
TACCGTTTCTGAAATGACGACGAGATTCCTCCAAATGGGCTGCTGCCCTG
CAAAGCTTTGTAATATTTCCTTTCGGGCAGTCCGGTCTTGACCGGCGACT
GCGTGCTCCGAGTGCTCAAGCGATTGGCTCTCCCTTTTTTTTTTGCCGGC
GGCGTGTACGATCGGTCTGCTTCGGTGCTGTCGGCAATACGGGGGTGTGA
TGGTATTTTTTTTTACAACGCACCCCTTTTGATCGTTTTTTTTGCTCAGC
TGCTACACTGTCCAAGTCGCTTCCCACGACGAGGAGATGGTTCCTCTGAC
GATCGTCCACCGGCGAGACACGCAGGTGGACGGGAGCAACAGGCTGGTCT
TGCACGGGTGAGTTACTTTGCTCGTGGTGAGGTTGTGCCTGGCAACAAGT
GCTTCCGGATTTAGAGGGACGGTTTTGAGGCGCTGCAAGTATGAAATCGA
CTCAAACCCCTTTAGCAGATTTACCACGAGATCTGTATGTTTGGCAAGCA
CCATTCCGCGTTCTACTACCCACACCAACAACTCACCTCACCGCCACCTC
AATACCCCCCCCCCACTCTGCGCCAAAAACGATGTACCTGCGATTGATAA
CAGTTACGGATCGTATGGCATGTCGTTGCCCATCGATTACCACCCTGAAC
ACGCGTGCATGCTCGAGAGGGGTTGGGTTTTGGCCTTCGCACACGTGAGG
GGCGGGGGGGAGCGGGGCAAGGCTTGGCACGCGGCAGGGCGGGGGCCCAA
CAAATGGAACAGCTTCTGGGACTTCCAGGTGTGTGGTGCGCGCGTCAAGC
AGTGCAGTGTAGCCCCGCCGAGACGCTCCTGGAACTATATCCGACCAACA
CCGTGCGCAGGTTGGAAGGCTGGAAGGCTGGAATGCTGCTGCTGCTGGCT
GCTGCTGCTGCTGGCTGCTGCTGCTGCTCGTGCTCTGAGTGAATATTTTA
TGTTATTGTTTGGTGTCTGTCTACCTGCGTCCCTCCGTCCGTGTGGAGCG
AGCATACCCTCTTGTAAAGCTTTTGCTGTGGTAACGACGGAATGAGTTTC
CCCGGGGCGCGGGGTGGGGGTGTGTCATTTGCTCTCGTCCCTCGCCGCGC
CCCTTCCGGTTGATCCCGCTCGCAAACCTACCACAAGCTGAGTTGTCGTC
ATACGTTCACTCTTCTGCACCCTATCTGCAACCCATTTTTCCGTTTCGTG
ACCAGGCGTTCTTTCACCCCCGTGAATGACGCTCTTCTTCGTGGTATGGC
ATGGCATGGCATGGGATGGCATGGCATGGCATGGCATGACATGGCTTTGA
CCTTTTTGGTTTGTTTGTTTTGTGCTCCTTTTTTCTTTTTTTTTGGTGTT
GGCCATGGTGCGTCCTCGTCTGCGGCGTGTGTGTCCGAACAGGCGTGTGC
GGACCACCTGATAGCGGAAGGGTTCACGAGCCCTTCGGCCCTGGGGGCGC
ACGTGAACAGCGCCGGCGGCTTGCTGGCGGGGGCGATGGCCAACTTTCGG
CCAGGCCTGTTCTCGGCGATGGTAATGAAGGTGCGCTTGCGGTGAGAAAG
AGGGGAGAGACAAGACAGCCGTATGATACTGTATAACCGTGTAAAGAGCC
CCAAGACAAGGGCAGGAGATTTGTTCGGCGAAAGATGAGACGACGAAACG
ACAAGACGAGAAGCGGGAGATCTCCGGTTCTTTGCTGTCGACACGATGCC
GCAGGCGAAGCGCGCAAGGTGATATGATACAGTAGCGCGATACGGGATCG
CGACGGGATCGCGACGGCACGGGGCGTGATGCTGCGCACACGCATCTTTT
GCTGCGAGACGGACGGTAGAACAAAACACGCACGTTCACTGAGTTTTGGA
CCCACCCCCCCCCAGCCTGTTTTTCCCCGCATACCCTTCCCATGTAAGAT
ATGATACGGCAAAAACGCAACGAGGGCTTGAATGTTGGTGTGGTGGTGAC
CCCTTTGGGGGTAGGAACGGTGCTGCTTCCGTCCCGAAAAAGGCTGTATG
ATATGCGTGAAGTGAATTACTGAGGGAAGCAACAAATGCGTACGCCCCCC
CCTCCCCCTTCCCCTCCCGCTGGCATCTTCAGGCCCCCTTCTTGGGGGTG
CTTTCCGCCATGCGTGATACTTCCCTGCCGCTCACGGTGCACGAGTTTGA
CGAGTGGGGCGACCCGAACAGCAGTGAGGAGGTGGAGGCGATGATCCGAT
CATACTGTCCCTACGAAAACGTTCGGGAGCAGGAGTACCCGGCGTTACTG
GTGACGGCTTCCGTTAACGATAATAGGTGAGGGGGGTAGGGGGTAGGGGG
GGGTAGCGCACAGGGCAAGGGAGGGCCGGGCAGGGTCGGTTGAAAACGCG
CTGGCAGACTCGTGCTTGCTTTGCCGCATTGGCGTTCCGTTGAAACGTTG
GTGTGCACGACCAATCTCTTGTGTAGGTGAGCTGCCTCCAACGGCAGTAA
TAACTATTGCCAATGCGTAAACCATGATCTTTGAGTGCCCTCCTGACTGT
CATATTTTGGTTTCGACGCATCAACAGGCTCGACTTCGTACAGCGGGCTC
GCCTCTCATCCCTGAAGAGTACTGGCGGGCGCCGCGCAATTCAGTTTTGC
GCCCCCACCCCCACGCACTGCGGATAAAATACGTATTGCCAATGCCATCA
TATCAAGCATGCGTCCGGATGGTAGCCGGATGCATTTATTTCCGACCACC
AAACGAGTGTTTCGGCACCGCGTCCACCGCTCCGCCCGGTTCCTAGCCAA
GACGCCGGATTTGAGGTGCGCTGTCAAAAGGAGATGAACCTACCCTCCTA
GCCCTGCCCTAGCCTTCACGTAGCCCACCTGCGCTTTTGCTTTGTGTACT
GCCCCCGCTGCCGCTAAACAGGGTTAACGTGTGGGACCCGGCGAAGTGGG
TGTCACGGGTCCGTGCGGCGAATACCGGCGACGCCCCTGTGCTGCTGCGC
GTGAGCGACACCGACGGGCACCACGGCCCGGACAACACACTGGATGGGCT
CCGGGACTCGGCCATGGAGATGTCATTTTTGGAGAAATATCTGAGAGTAC
AGGCGAAGAACGGGGCGTCTTCTGCAACACCAGCACAGCAGTACAAGTAG
TATGTATGATGGTGTGCAACAGCAGCGCTGCTGAGTGTCTCCCTTCTTTT
TTTTTTCCGTCATGCTGCAGCCGCCCATGGCCAGCAACAGCTTCGCATAC
GATACGCGGTGAGCCCGTCGCCCATCGTTGGTACCACTCTGATCACGAGT
AAAGTAGCCGGTACGGACCAAATGATTCATATCTATTGCCCACGAAGAAC
ATTTTAAACGCGGGTTCGAGCCCCGGAATCGCGGTGTTTTTTTTCGTCCA
TTTTTCCAGTTTTTGTTTTTTCACCTTTTTTTTTCGACTTTTTGTTTCGA
CTTTTTTTTTCGTTTTTGGAGCTCTTTTATTTTTTTCCTTCGGTGTGATA
ACCAGCTAATTAAAATCTTCAAAGTAAGGGTTTCAATATCTTGCTGGAAC
ACTCATTAACCACAGCAAAAAGCCCGGAGTGAAAAATATCGTGTTTCGCG
TTCGGGGCGGTGGGTCCAAAATACCCTAATATTTGCAAGTTTTGCACCAA
AAACCCAGGACCATCCTTGGGCGGAGCCCGGGAGGGGGCGTTTGAAAGCC
ATCCCCGGGGTATTCCATCCAATTTCTCTTCTTTGTTTCATCCCCCGAGT
GCCTCCAGTGATAAGTAGCAGTTTTGTTTGCAATAGCATCTATGCAATGG
CTCGTTTGTGAAACCGGCCACTTATTCATGATCAGAGTAGTACTGTAGCT
GGGAAGGTTTGACCTTTGAGACTTTTTTTTCTGAAATTTATCCTAGTTGC
GTATGTATTATACATTTGCTGCTATACTACAATTGAGCTCCATTCATGCG
CATCACGCTCGAAAAACAGGCGAAATATGCCCGTTTTCTGCTTATAGTCG
GCACTTATGCTTGCACATGCTCTCAAGATAAAGGGCCTTAGAAACGCGGG
TATGCTATCATAGTACTCTGAAAGGTCAAACCCTAGTAGCTGGCACCCTC
TTCTGTGCGAGATGGTGCGCAGCGGCCTCAATTCACTCGACG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig85:297430..312971-

>mRNA_P-littoralis_Contig85.68.4 ID=mRNA_P-littoralis_Contig85.68.4|Name=mRNA_P-littoralis_Contig85.68.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2934bp|location=Sequence derived from alignment at P-littoralis_Contig85:297430..312971- (Pylaiella littoralis U1_48)
ATGGCGGCCTCGTGTTTCTCTGTGTGGGCGGTGAGAGCAGCACGGAACGT
GAGGTTGCTTCGACCTCGTGTTCGACCGCGCGGACAAATACCAACAGCGG
CCCTGCGGTGGCGGTCGACGAGCACACCACCCTCCTCTGCTGCTGAAAGA
TCTAGTGCCGTTGCCATCAACGAGAGAAGTACTCGAGCACAGAAGCCTCC
GACCCCACGTCGGCTACCGCCAGACACCAGCAGGAGGGGAGGGGACGATG
AGTACCGATGGATGCACGACACCGGCAGCGAAGAGATGCTCAGGCACATG
GAGCACGAGAATCGTTATTCCGCCGCGTGTTTGAAACCGCTCCGCCGACG
CGCGAGCGCGCTGTTCCGGCGCATGGTGGACCGCCAGCCGGAGGAGGAGG
GTGGAGCCAGGCGCAGCGTTCCCGAGCGTCTGGGGGGCTACCTGTACTAC
ACGAGGCGAGACGACGGGAAAGGGTTTCCTGTGTACGTCAGGCGGCCTGT
GGAGGGTACGCTCCACGATGAACAAGTGGTGTTTGACCTGAACGAGATCG
AAGAGCACGGTCTCCGCACCGGCAGCGGCGGGCACGGCGGTGACCATGGT
GGCGGCGGCGCGAAGGGAGACCCCGACCATGTGCCCCCGACGCCCGCGCT
GGGCTCCATGAAGCTCTCGCCCGACCAGCGGATGCTCGCGTGCACGATCG
GCGTGGACGGGAGTGATCGGTTCGTGCTGGCGGTGTTCGACCTTCTCGGG
GGGCTTGGAGGGGAGGGGAGGAGCGGCAGCGGTAACGCGCATCGGGGGCC
GACAGCGGCTGTGCTGTCGGAGGATGCCATCTGGGATGACGTCGTGGGTG
TCGAGTGGGGATCGAGCTGGCCGCCTACCTCCCGGGGCGGCGGCGGCGGC
GGCAGGGGCGACCCCGAAGTTAGCAAGTACGAGCTGTACTACACGGTGCC
TGACGAACTCCGACGGCCGTGGCAGGTTCGGCGTGCCACACTACATCGGA
GGACGAGAACAGGCTATTCAGGAGGAGGTGGGGAAGAGCCTGAAGGTGGG
GATGCAGGTGGTGGGGGCTGGAGGGTAGACTCTGCGGGCGACCGCACCGT
TTTCGAGGAGAAAAACGACGCCTTTTTCGTGGACGTTGGGAGAACCAAGG
ACCACTCCTTCGTTGTGATCAACGTGCATTCCAAGACCACTTCAGAGGTT
TACCTTATCCCGACGGCGACGGGTACCGCTGGTGCCAGCGACGCAGGGGG
CGGACGCGTCGACGTAGGGCAAGGGACAACGGCGGCGAAGGGCGACAGCG
ACGAAGAACGCAGCGTGGTGAACGGCGGGAACAGCGACGGCGCTGCTCCT
CGTGGACACCATCACCACCGTGCTGGTCCCGCGCTGCTGCTTCGCAGGAG
GCAGCAAGGCGTGGAGTACTACGTCGATCACGCTGGCGACGCCTTTTACA
TTGTTACCAACTCTCCGCCATCCGGAGCTGGAGACGGGCAGAACGAAGCG
GCGACCGGTGTGGGCGAGTACCGTCTCGTCCGTGTGCGGCAGCCGCCGGG
ACGACGGCGGGGGAGCGCCTCGTCCCTCGAAGGCGTCGCCGACGCACCGT
GGGAGGCACTTCCGTGCGGAGGAGACGGGTGCACGATCCAAGAGATGGAC
CTGTTTCGGAGCCACTGCGTTCTCTACGAGTCCTCCGCGCTTTCCGGGTG
CCCTCGCCTGAGAGTGGTCCCGCTTGCGGCCTCCGACGGCACGCGTCCCG
GCTCGTCGCCGTTCGCCGTCTCCCCTCCCGCCGCCGGTGGATGTAGCGGC
GGCGGCGGCAACACCGGTGCCAGTAGTGATGGCGAAAGCAGCACCAATAT
CAGCAGTGAAAGCAGTAGGGATTGTGACTTTAAGGGCCGGGGTGGGGTGG
CGACGCCGAGCGCGTGCACGCTAAGACCGGGGGTAAACTCGTGGTTTGAG
GCTCGAACGGCGCGGTTTTCGCTGTCGTCGCCCGTGGCGCCGGAGGATGT
CTACGACCTGTGCTTGGAGTCTGGGAGGATGGATCTGCTCAGACGGACAG
AGGTGCCCGGTAGCCCGCCCTTCGACGGCCGTGACTACAGCTGCTACACT
GTCCAAGTCGCTTCCCACGACGAGGAGATGGTTCCTCTGACGATCGTCCA
CCGGCGAGACACGCAGGTGGACGGGAGCAACAGGCTGGTCTTGCACGGTT
ACGGATCGTATGGCATGTCGTTGCCCATCGATTACCACCCTGAACACGCG
TGCATGCTCGAGAGGGGTTGGGTTTTGGCCTTCGCACACGTGAGGGGCGG
GGGGGAGCGGGGCAAGGCTTGGCACGCGGCAGGGCGGGGGCCCAACAAAT
GGAACAGCTTCTGGGACTTCCAGGCGTGTGCGGACCACCTGATAGCGGAA
GGGTTCACGAGCCCTTCGGCCCTGGGGGCGCACGTGAACAGCGCCGGCGG
CTTGCTGGCGGGGGCGATGGCCAACTTTCGGCCAGGCCTGTTCTCGGCGA
TGGTAATGAAGGCCCCCTTCTTGGGGGTGCTTTCCGCCATGCGTGATACT
TCCCTGCCGCTCACGGTGCACGAGTTTGACGAGTGGGGCGACCCGAACAG
CAGTGAGGAGGTGGAGGCGATGATCCGATCATACTGTCCCTACGAAAACG
TTCGGGAGCAGGAGTACCCGGCGTTACTGGTGACGGCTTCCGTTAACGAT
AATAGGGTTAACGTGTGGGACCCGGCGAAGTGGGTGTCACGGGTCCGTGC
GGCGAATACCGGCGACGCCCCTGTGCTGCTGCGCGTGAGCGACACCGACG
GGCACCACGGCCCGGACAACACACTGGATGGGCTCCGGGACTCGGCCATG
GAGATGTCATTTTTGGAGAAATATCTGAGAGTACAGGCGAAGAACGGGGC
GTCTTCTGCAACACCAGCACAGCAGTACAAGTAG
back to top