mRNA_P-littoralis_Contig85.132.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: D8LLV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV0_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 2.910e-136 Identity = 203/298 (68.12%), Postives = 218/298 (73.15%), Query Frame = 1
Query: 1 SRVKRQAYIHKGDVIVCDLDGVVKQNLVNDRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAWHKL 894
S V AYIHKGDV++ LDGV++Q LVND GVRAME+ WSSDG+RLIYFFDAK AP S DDGG+FTQGI MVP GR FIVGCSDGDVFAFQAKTG QGEACELTATLRGH QP+TCA ADSECCVSGDAGGT+IVW+IAKHLERECSFDGDG L IEIAAHSR INA+DLHPSSMLLATVGEDLFLNVWEL +CGQEGP GQVGL+ATSR DNRLLTGV+FL DGS+RIIGLAYDCD L WHKL
Sbjct: 26 SSVSTFAYIHKGDVLIYGLDGVLRQTLVNDGGVRAMEI---------------------WSSDGRRLIYFFDAKAAPGSSTVDDGGNFTQGIAMVPRGRNFIVGCSDGDVFAFQAKTGPQGEACELTATLRGHCQPITCAAADSECCVSGDAGGTVIVWSIAKHLERECSFDGDGT------------------------------LAIEIAAHSRTINAMDLHPSSMLLATVGEDLFLNVWELPKCGQEGPSGQVGLVATSRVDNRLLTGVQFLVDGSHRIIGLAYDCDHLQIWHKL 272
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: A0A7S2FDR9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDR9_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.980e-34 Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 1
Query: 247 DDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGT--VVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAWHK 891
+ G F +G +V A + VGCS+GD+ FQ + L T++ H P++ + SGD G + +WN +++ F G+G P T L + +VA ++ G +RI R + +E+AAHSR I A+D+HP+ + TV ED ++ VW L + ++ +V L+ R ++R LTGV+F DGS RI+ AYD LL W +
Sbjct: 22 NSGMPFMRGAAVVDATQDVCVGCSNGDIAVFQMAANSN---ARLQRTVKCHEAPISTMTGGGDLVASGDDEGQVCLWNA--QFDQQAIFPGEGLPCTCLGMHNDADALVAGFAHGVLRIVQLSTREVTVEVAAHSRCIMALDVHPTQPIFTTVSEDTYMKVWALPD-SEDKSASEVALIYEERVEDRFLTGVQFTRDGSERILAAAYDSKELLVWDR 232
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: UPI00145501AA (WD repeat-containing protein 54-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145501AA) HSP 1 Score: 132 bits (332), Expect = 9.810e-33 Identity = 73/270 (27.04%), Postives = 133/270 (49.26%), Query Frame = 1
Query: 85 NDRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFD-AKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAWHK 891
N + ++ C + LV+ G+Q++ DG L+++ + + P+S G F +GI + + VG S G + F + +G + +L GH P++ D S D G I+VW + + R C +G G +++C DG V+ Y +GH+R+F+ K +LV EI AH++ I++ID+ P++ LL + ED F+ VW +++ +G Q+ L+ + LTG +F I YD + ++ +++
Sbjct: 67 NPQSTVILQAKFCQLPNRTLLVLCYQRGIQMFEPDGSALVFWHAISHIDPSS-----GMAFARGIAALHENYI-AVGISSGQILIFNIPS--RGTNVMFSESLSGHSYPISAIAGDGSIMASADDSGCIMVWQAGQKINRVCRINGGGVSCSSVCLFDGLVIGGYGSGHIRVFDAMKGVLVSEICAHAKWIHSIDIAPTAGLLLSTSEDTFVRVWSIAK---DGDVTQIQLMFAETVSDTQLTGAQFTNKSGRNFILSGYDLNEVVCYNQ 325
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: UPI00106D036C (WD repeat-containing protein 54-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D036C) HSP 1 Score: 122 bits (306), Expect = 5.460e-29 Identity = 79/265 (29.81%), Postives = 125/265 (47.17%), Query Frame = 1
Query: 97 VRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAWHK 891
V M+ C D LV+A GVQ++ DG +I++ ++ E +F +GI + +G G + F + QG L TL H +T + + VS D G I+VW + +++ G G P T+L +G ++A+YS+GH+RI++ +L IEI AHSR IN++D+ S LL +V ED F+ VW L + +V L+ + + L G RFL D YD ++ + K
Sbjct: 67 VTVMQAKWCHVSGRDILVIASAKGVQMYEQDGSIMIFWHS--VSQQQLENKSFSYFARGI-CSTLNKYLCIGTCTGSILVFDIPS--QGTTITLHKTLDHHNVGITDLASVKDKLVSADEDGNIVVWQCDQTMKKITEIRGSGTPCTSLALWNGFILAAYSSGHIRIYDLALGILKIEICAHSRCINSLDIASESCLLLSVSEDSFVRVWALPKDSSN----KVELVFQAPVSDSQLCGGRFLDDAGQSFGVSGYDLAEIVVFGK 322
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: A0A2D4BSA3_PYTIN (Dynein light chain 2B putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSA3_PYTIN) HSP 1 Score: 116 bits (290), Expect = 1.140e-26 Identity = 99/301 (32.89%), Postives = 151/301 (50.17%), Query Frame = 1
Query: 22 YIHKGDVIVCDLD----GVVKQNLVNDRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDG-GHFTQGIGMVPAGRLFI-VGCSDGDVFAFQAKTGAQGEA---CELTATLRGHG---QPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATAL-CARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAW 885
Y H DV+V D V K +V V +V LC +D F+V A + G Q++ S G++ + F+ L + +DG F +GI + + R I +G + G +F + ++ + ++ L H Q + C+ A+ S D GTI++ N E GD PAT+L GT++ Y TG +R+F + + EIAAHSRA+ AID+ S L+ +VGED F+NVWELS +E P ++ L+++ N LLTGV F+G S ++ AYD L W
Sbjct: 34 YAHMDDVVVVDTTQSPYAVHKLPIVEKSLVX--QVQLCVLQDTAFVVAATDLGAQIYDSKGEKRV--FELSLKEHVGAVEDGTALFCRGIAAIDSNRPAIAIGSAVGKIFILAKEKSSKATSDHDFDVVEKLSEHKDAIQSLACS-ANGGLLASCDDSGTILIRNPEDAFEVXHRIPGDNFPATSLRFTPSGTLLGGYLTGLLRVFRSTDFHVHAEIAAHSRAVTAIDV--SDDLVVSVGEDTFMNVWELSG-KKEAP--RIQLVSSHCVSNDLLTGVVFVGAKS--VMTAAYDTTHLKLW 322
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: K3X7I0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7I0_GLOUD) HSP 1 Score: 115 bits (288), Expect = 2.260e-26 Identity = 96/299 (32.11%), Postives = 141/299 (47.16%), Query Frame = 1
Query: 19 AYIHKGDVIVCDLDGV--VKQNLVNDRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGR-LFIVGCSDGDVFAFQAKTGAQGEAC---ELTATLRGHGQPVTCAGA--DSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALC-ARDGTVVASYSTGHVRIFNTQKRM-LVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAW 885
AY H DV+V + + L +V +C+ + F+VVA + GVQ++ G++ +Y K A + PE + F +GI + IVG S G +F + A+ + +L TL H ++C + D G I+V N + E +GDG P T+L D ++ Y TG +RIF + L E+AAHSRAI A+D+H + ATV ED FLNVWEL+ +V L+++ N LLTGV F G S I+ A+D L W
Sbjct: 33 AYAHMDDVVVVNTAQTPCITHKLPITEKSFIHQVRICALQSNVFIVVASDNGVQIFDDKGEQSLYELALKDALDVPE-EGVALFCKGIAAINLDNPSLIVGTSLGKLFILGNEKSAKATSSTEFDLLETLNEHKDAISCIDSTKSGSLVACADDSGLILVRNPDGNFEILHRIEGDGFPVTSLSMTMDHWLLCGYLTGRLRIFKKENNFQLHAEVAAHSRAITALDVHDHQV--ATVSEDTFLNVWELTSSKTST---KVKLVSSQCVQNDLLTGVAFAGAKS--IVTAAFDTTHLKLW 323
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: C3Y3W9_BRAFL (Uncharacterized protein n=4 Tax=Branchiostoma TaxID=7737 RepID=C3Y3W9_BRAFL) HSP 1 Score: 115 bits (287), Expect = 2.610e-26 Identity = 72/243 (29.63%), Postives = 116/243 (47.74%), Query Frame = 1
Query: 19 AYIHKGDVIVCDLDGVVKQNLVNDRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVT---CAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSE 738
A +H+ V + + G V + + C + LV+ GVQ++ DG ++++ A + + F +G+ V AG L VG S G+V F +G LT T++GH +T G + V+ D G IIVW K +E G NPA +C TV+A+YSTGH+R+F + + E+ AH+R I+++D+ P S LL + ED + +W+L +
Sbjct: 35 AVVHRSAVNLVTVSGPVTGE--GQQNFHHRQAKWCQLATRNLLVITSQKGVQIFEQDGAIMVFWHALGAAESVSGYST---FARGVAPV-AGNLICVGTSSGNVLCFNIPP--KGPNVTLTETMKGHSSAITDITSTGHTGDTVVTADDSGNIIVWKGPKFVE-VTRISGSRNPACCVCLWKDTVIAAYSTGHIRLFGAETGNIHAEVCAHARWISSLDMLPESGLLISASEDSYARIWQLKK 268
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: A7S438_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S438_NEMVE) HSP 1 Score: 112 bits (281), Expect = 2.190e-25 Identity = 73/247 (29.55%), Postives = 119/247 (48.18%), Query Frame = 1
Query: 19 AYIHKGDVIVCDL--DGVVKQNLVNDRGVRA------MEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAKHLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELS 735
A +HK V + ++ + Q V+ +G A ++ C + + LV+A GVQ++ DG ++++ + P + F++GI V + VG SDG + F A+G +L TL H + + VS D G +I+W H + G GNP +++ V+ Y TGH+R+FN L+IE+ AH+R INA+D+ P + LL +V ED F+ VW +S
Sbjct: 35 AVVHKAFVCLTNVAKGSIPTQRQVSCKGEGAHSSSSVLQAKWCELPNRNVLVIASVKGVQMFDPDGSIMVFW---QSLPPCEATEVYSQFSRGICAV-GDKYICVGSSDGGIMVFDVP--ARGTGVKLQETLSSHNGAICDLVSHGGKMVSSDESGHMIIWQSGGHFTQLSQIKGFGNPCSSIALLRNLVIGGYGTGHIRVFNGATGKLLIEVCAHARWINALDVAPDAGLLLSVSEDTFVRVWLIS 275
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: T0Q2G5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q2G5_SAPDV) HSP 1 Score: 111 bits (278), Expect = 6.300e-25 Identity = 90/304 (29.61%), Postives = 148/304 (48.68%), Query Frame = 1
Query: 19 AYIHKGDVIVCDLDGVVKQNLVN--DRGVRAMEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGG-HFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACE-----LTATLRGHGQPV----TCAGADSECCVSGDAGGTIIVWNIAKH-LERECSFDGDGNPATAL-CARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCG-QVGLLATSRADNRLLTGVRFLGDGSYRIIGLAYDCDRLLAW 885
A+ DV+V + K N V+ ++ V + L+C+ E LV+A +G Q+W G+ L +F L P +G HF +GI + +VG S G ++ + + + L +T++GH V T A VS D GT+IVW + LE++ G P T+L C + V+ +TG +R+ + ++ ++ AHSR ++A+D+H + ATVGED +L+VW+L + G G + L + RA + L+TGV F S +I+ +YD + AW
Sbjct: 30 AFASMEDVVVFNTTTNAKPNKVSLVEKTV-VYQALVCAFEREQLLVIANESGCQIWDLLGEHL--YFSLALTKEPPSGSEGEYHFCRGICAETTTKSILVGSSLGKLYMLSQTAAGEAKGRDHSEFHLQSTVKGHNAAVQAVATNGSAKEPLAVSSDDDGTLIVWGVEPSGLEKKQVIQGTSFPTTSLRCFQTRWVLTGDTTGKLRLVDMHDGVISADVGAHSRHLSALDVHNDRV--ATVGEDGYLHVWKLKD--DAGATGLRFELEHSHRAGDDLMTGVAFAS--STKILTTSYDSTLIKAW 324
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Match: UPI000719EA49 (WD repeat-containing protein 54-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719EA49) HSP 1 Score: 107 bits (268), Expect = 1.650e-23 Identity = 78/284 (27.46%), Postives = 135/284 (47.54%), Query Frame = 1
Query: 4 RVKRQAYIHKG--DVIVCDLDG----VVKQNLVNDRGVRA----MEVLLCSGEDFDFLVVALNTGVQVWSSDGKRLIYFFDAKLAPNSPEFDDGGHFTQGIGMVPAGRLFIVGCSDGDVFAFQAKTGAQGEACELTATLRGHGQPVTCAGADSECCVSGDAGGTIIVWNIAK-HLERECSFDGDGNPATALCARDGTVVASYSTGHVRIFNTQKRMLVIEIAAHSRAINAIDLHPSSMLLATVGEDLFLNVWELSECGQEGPCGQVGLLATSRADNRLLTGVRF 822
R + +HK ++I DG + +Q +V + G M++ C + +V+A G+Q++ SDG ++Y+ + P S E + +GI + L I G G + F+ +G L +L+ H P++C + SGD G II+W + + L DG G+P + + + +VA+Y +GH+R+F + E+ AH+R INAID+ + ++ TV ED F +W+L +EG ++ L++ N LL G F
Sbjct: 30 RTQSYGVVHKSVANIITIAADGANVLMQRQVIVKEPGGHGSTIVMQMKYCEFPERSLMVMACQRGIQIYESDGSVMLYWHSL-VNPESNEVSKA--YARGICTLQDSMLCI-GTDSGTILVFEIPP--KGTNILLKESLKEHVLPISCLHSHGLVLASGDDSGCIILWRVEESQLHPYKRIDGLGSPCSGVRLWNELLVATYGSGHIRLFKVISGHMCAEVTAHARWINAIDVVHRNGMVLTVSEDSFAKIWQL----KEGDAPEIEHLSSECVQNVLLCGAAF 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig85.132.1 >prot_P-littoralis_Contig85.132.1 ID=prot_P-littoralis_Contig85.132.1|Name=mRNA_P-littoralis_Contig85.132.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp SRVKRQAYIHKGDVIVCDLDGVVKQNLVNDRGVRAMEVLLCSGEDFDFLVback to top mRNA from alignment at P-littoralis_Contig85:500909..510526- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig85.132.1 ID=mRNA_P-littoralis_Contig85.132.1|Name=mRNA_P-littoralis_Contig85.132.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9618bp|location=Sequence derived from alignment at P-littoralis_Contig85:500909..510526- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig85:500909..510526- >mRNA_P-littoralis_Contig85.132.1 ID=mRNA_P-littoralis_Contig85.132.1|Name=mRNA_P-littoralis_Contig85.132.1|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig85:500909..510526- (Pylaiella littoralis U1_48)back to top |