mRNA_P-littoralis_Contig84.28.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig84.28.6 vs. uniprot
Match: D7G3Y1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y1_ECTSI) HSP 1 Score: 860 bits (2221), Expect = 1.710e-256 Identity = 1328/2889 (45.97%), Postives = 1522/2889 (52.68%), Query Frame = 1
Query: 2398 RSWXXXXXXXXXXXXXXXGFGGPLPSPVPEESXXXXXXXXXXXXXXXXXXSG----RTKSSNSRGFVRPVRARRAASSATKD----AATLSDDSNGXXXXXXXXAAIVDNSSEMDLLDPARWGATPPGAAGVNEPISPASRLFNSLAISVRQAAADGVGG----GGDAMLRRAAAALNNADETPDRGGVVGVGVGNNNNFGRRVLVQRQDTNRRWPAGPKNFSQGSSIFDSVASGELDQQEXXXXXXXXXXXXXLVKQRTLEEVASNSEGSDASAELNSLGTTDAGSSPLSASPDHSGARGTN----------PSAASVLGHSSGSPMRVAISALEEEEEGGDVVGGDNEVGSGDLAGGGTGRSRR-HSRDGGSIS---FDAQGSGSTTPANESSSSTASLRA-DSVPDKWNWHKSFGTAESVNQPQLGMSSGGNTS-PVTTPKSASSPRSETSNDDSARQRPAPLQVQRSP----PVGRLEQSPLLHGSWERKPPRGSTTASPRVVTPMAVAHEREGEXXXXXXXSAGEG-------DSVEVVSFGDEVLSALTTPAPTWRQPTWSSEPKQSAMAQDSKEDPADFAVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSRAKKLMASPLKKSWLSKSLGIFS---RGGRQLQSNRKVAVGQGDDKEEMHEXXXXXXXXXXXXXXXXXXXXXXXXXEEQAATVQGAKDATAAAVTADEPQLHGEEKRELHQGVSPPGAEAAVAKGAGEAEATVIDVAADVGEAAIDAAGGEVAAGVNIAGEGEAEVIDXXXXXXXXXXXXXXXXXXXXXXXXXRKEVEAANAXXXXXXXXXXVAREKPKQGELELNGPLNGPLDRQQSAXXXXXXXXXXXXXXXXXXXXXXXXXERKVKELQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEVEEMLRQAEAAKEE--------------------------ATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVDSQGSESQQDGKLPGKTSSQESPPELEQLSSGVEXXXXXXXXXAP-------------SSLLQKLTG---WLPKKQETSSNATATSELDVETAAVDDGGVSCCGDGGDGGEDQLCRPLHREXXXXXXXXXXXXXXXXXXXGGEIAGRPVPTVAAQPKAMAAVETPQKETESRAAEVQQQVGKSVADEPVAAQQPPAEANNAEHHQQSVLAGVAWQPPSISPQMPPPLLHQLSQRGEHELRKKEEREXXXXXXXXXXXXXXXXXXXXXAPPAVRILAKPRAAEQPSRTASPPGRPSPEVSPPKLSQLVQKRNGHTPQQXXXXXXXXXXXXXXXXXXXXXXLTLDLPKERIEQQKQ-----PAVKPRPSARVRLLPSPQELARRRAARALQLQKLLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKTPPQLKESVLGQAHAQQDEEQQNQPLPAPQNLEGKMHEVEPLLSPRPAPFPRPALPAAIATLASPLGGGSSSEDTPTGSGGEMEVAARVPIAAGELRQEQQQKPGEDESRLMNTLSVERDVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKEALAGVPRLSSTPWAVGEAEAADIARAATAAALSAVXXXXXXXXXXXXXXXXXXXPDRQDSNAEGSGGGSAVGGDRSTGISGGDDADGNTSSSSRKNIIGSVEAGSLMSAPDQEAVRAWLKRGVTVKKWTAGGSGTRKRKLWLE---------SADESALSLGVAGGRRGAEEDQGSPWLAWAKEGLLNGAGXXXXXXXQEPWEGEDGALVLVLQSDKGDDTAHRLRNLRAVAEDAGDKSVTLSFE--GSGDRAEGKMKLSFQTDKPVVLFFRQVVANSERHARITRAAKTSLSAIEAVASARAVSAAAQDTSSRWRRSSYLEEMEEACMNGDVVESQVNSSAAAASHLEDSRAAREEIEGVVNVLTRFDHGLKPSPAVVLSNAEDIEEEANRRFRGDVRRVLSVVKLAVACRGAKEAAEFCRKLKHHQQVSAVMWETPSVASIVKSSNGGFPGIKAFVKLKASKHVVEVELQSEKFHTTAGMDYKALEWARALRKPVPSIDPCVRFDQLRGPVQQRMVDLARQDWMGLRRVLPQLLRATGDVAEAEQILRQNASEEKAVCVLAGTVGD------ARTASVVALASARTELAGLLHEQGKLLEAEELYRSALDLRTAALGMEHPSVGLSATXXXXXXXXXXXXXXXXXXXXXXMNIAASPPRLPQXXXXXXXXXXXXXXXXXPWSHSALMVSRXXXXXXXXXXXXXXXXXXXXXDDHDGXXXXXXXXXXXXXXXXXXXGADEVGIMVMARATSSRRAPNPPMASPPVGDVLLDDKAAPKNPPASSAVPVPLSALSASPFSVKSDGGDTRGFVDAGHIRGDNDYTTVAAVGPSTAAXXXXXXXXXXXXXXXXXVTAVDPTAXXXXXXXXXXXXXXXXXXXAGVDAKTATXXXXXXXXXXXXXXXXXXXLTTLEQSVEVK---MVAAKEKEMVEEEKSGRDWELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLEFLARMAIQSGKTFTEMEGLINRLVEVREACLTKSNAPPAVEGRRQVGSVMSDLALALRQQRQEQATRAFPLFR 10737
RSW GFGG LPSPVPE S XXXXXXXXX + K++NSRGFV+PVR R+ S + AA ++ ++G A A GA V+ PISP SR+FN +A S+++A A G G GDA L RA AAL +A G GN N+ RRVL++RQDT RRWP+GPK+FSQGSSIFDSV E AS+++GS + EL SLGTT+AGSSPLS D G+ PSAASV+ S + R A++ALEE++ G+V GG+ VGSGDLAGGGTGRSRR H R G S S FDAQ S STTPAN+S SS AS + D +KW SFGTA P++G SSG +++ P+ TP+S+++ D AR R A +R P R EQSP L PP+ PR+ + + + +G + E F +EVLS + P P PK + K A E XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX A +P+K SWL+KSLG RG RQ XXXXXXXXXXXXXXXXXXXXXXXXX E + A AA+A+ E E X XXXXXXXXXXXXXXXXXXXXXXX K E +E+ + EL+ ++Q++A XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EAE EMLRQ + A + XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S G +SQ S Q SPP+L+QLSS V XXXX S L+KLT W P+ ++ S GG D + H+ XXXXXXXXXXXXXXXXXXX + V +E AQ PA+ + Q AWQ P +SPQ+PPP+L QLSQR E ++ XXXXXXXXXXXXXXXX A S TA P + SP+VSPP+L QL Q +Q K R+E+ ++ P K R +RLLPSP E+A+RR+A Q XXXXXXXXXXXXXXXXX KTP Q KE V QAHAQQ +EQ+ LP P++LEG+M E EPL SPRPAP PR AG +R P +R AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+A +P L+ TPWAVGEAEAADIARAATA AL A R+ S A SGG +G + GSV +GS ++ DQ+ V AWL+ GVTVKKWTAGG+GTRK +A ES L+ GG A + G PW WA+ G+ + G E +GE G +LVLQSDKG D AHRL NLR V+EDA +KSVTLSF+ G GDR KM+LSF T+ PV +FRQV + +ITRAAKT+L A+E A+ARA+SAAA+DT+SRW S LEEMEEAC+ GDV+E+Q + + AASHL+DSR AREEIEG+V LTRF+HGLKP PA+VL+ EDIEEEA R +GDVRRVL+VVKL V RGAKEAAEFCRKLK+H QV AVMWE + +VK+SN GF GIKA V+L+AS HVV VELQSEKFH+TAGMDYKALEWARAL+ PV + PCVRFD++R PVQQRMV LARQDWMGLRRVLPQLLRATG+V EAE++LRQNASEEKAV VLAG GD ART S VALASAR+ELAGLLHEQGKLLEAEELYRSALD+RTAALG+EHPSVGLSA+XXXXXXXXXXXXXXXXXXXXX MNI ASPP LPQ XXXXXXXXXXXXXX P D VGIMV +ATSSR PNPP+A+PPVGD+LLDDKAAPKN P S VP S +S G V G R +D XXXXXXXXXXXXXXXXX XXXXXXXXXXXX L +EQ +E++ A+E EEKSGRDWELAHSVAVASLNNLAVLLSEQGDAEQAE FHRRALRAREVVHGPDHPD+PLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFLARMA+QSGKT+TEMEGL+ RL REA LT SNAPPA+EGRRQVGSVMSDLALALRQQ+QEQATRAFPLFR
Sbjct: 9 RSWGRSNSSSSSARGSSLGFGGLLPSPVPEGSEGSGGSXXXXXXXXXGGFGREDRPKAKNNNSRGFVKPVRVRKVMSKNARPENDAAAAAANGASGAADFKNAWGAAQLGGXXXXXXXXXXXPAAGAGA-DVSTPISPESRMFNDVAESLKRAVAGGASGVRSSEGDAKLLRAIAALESAAVPAAAATDGNRGFGNGNS--RRVLLERQDTRRRWPSGPKHFSQGSSIFDSV------------------------------EAASSADGSLLNVELYSLGTTEAGSSPLS---DFDSGHGSGEASQTGGAVYPSAASVIDDSKPAARR-AMAALEEDDSSGEVNGGNQGVGSGDLAGGGTGRSRRRHRRIGSSSSNFKFDAQQSDSTTPANDSCSSAASTKGGDGYSEKWALQNSFGTA-----PEMGSSSGNSSATPMMTPESSAA--------DEARLRQASFGYRRDSTSDQPAPRHEQSPRLP---RVPPPQQQQADQPRLTSSKELESSSSKDVPMPGVEEEEDGVDGGSFEEDEEGARFANEVLS-VEMPMPMV--------PKGRRWGEKEK------AAAEVXXXXXXXXXXXXXSNPPSAAATPTASGASAAKRLSQGTPAPAPRLDDPPTMVQDTKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAPKKAPMK-SWLTKSLGSLGKLQRGSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEAT---------------AAAAMAR--------------------------------------ELEEXXXVXXXXXXXXXXXXXXXXXXXXXXXLKLKEGRELDSDEDKGGPERLQEEHELMELQ---------NKQRAAAAEADEASAIAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAE--EMLRQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKAXXXXMLRQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVGYQVQERPEALDEEERRLQQESLAPVKGDDDASEDSSMGEDSQSRAGDLSDPSPQVSPPQLKQLSSAVAVAVAPXXXXXXXXXXXXSTPARPEKSFLRKLTEKLEWFPQNEQXXXXXXXXXXXXXXXXXXXVKEESV------GGTDAVPHD-HKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNE------------------------DGVQEEQAVAQ--PAK----DKDDQLAPTDEAWQTPGVSPQVPPPILDQLSQREGFESQRTPAPTAKPXXXXXXXXXXXXXXXXLPA----------------SSTADVPAKVSPQVSPPQLQQLSQAVGRVLHRQPSQE------------------------KPRLEEAEEKAXXXPRAKQRRPGGMRLLPSPHEMAKRRSASLQQXXXXXXXXXXXXXXXXXXXXXXXXRLLLQLPKPQASQEEVVPGA--------------------------KTP-QSKERV--QAHAQQQQEQRAHDLPGPRSLEGEMQEAEPLRSPRPAPSPRAP----------------------------XXXXXXXXXGAGWMRM----TPRRXXXXXXXXXPGDRRRSAADAEGAPGLKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------AVATMPDLNRTPWAVGEAEAADIARAATADALCAKEAEEHAARQ------------RRRSGAADSGG------------------EGEAGQEAHALGSGSVGSGSWLTVTDQDRVHAWLRGGVTVKKWTAGGTGTRKXXXXXXXXXXXXXSLAAQESQLA--APGGSSVATDGGGMPWSTWAQGGVTDSNGSSAG----ETLDGELGGWMLVLQSDKGKDVAHRLSNLREVSEDAVEKSVTLSFDDGGEGDR---KMRLSFPTELPVANYFRQVQETRTQEEKITRAAKTALVALETGANARAISAAARDTASRWTTHSSLEEMEEACLGGDVIETQPSLAVGAASHLKDSRPAREEIEGIVKGLTRFNHGLKPLPAIVLTTVEDIEEEAKRYHQGDVRRVLNVVKLVVVSRGAKEAAEFCRKLKYHTQVKAVMWERLPQSPVVKTSNIGFTGIKASVELEASNHVVAVELQSEKFHSTAGMDYKALEWARALKVPVSTSGPCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQNASEEKAVRVLAGRAGDGEDGDLARTQSAVALASARSELAGLLHEQGKLLEAEELYRSALDMRTAALGVEHPSVGLSASXXXXXXXXXXXXXXXXXXXXXSMNITASPPSLPQQXXXXXXXXXXXXXXPAPGR------------------------------------------------------GDTVGIMVTTKATSSRATPNPPVATPPVGDLLLDDKAAPKNSPLDSLVPAGCSPFGSS------------GVVGGGDARAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGNSSG---------------------------LLVVEQELEIRGQQQREAEESPRTSEEKSGRDWELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRAREVVHGPDHPDVPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFLARMALQSGKTYTEMEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSDLALALRQQKQEQATRAFPLFR 2477
BLAST of mRNA_P-littoralis_Contig84.28.6 vs. uniprot
Match: A0A6H5KHL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL0_9PHAE) HSP 1 Score: 865 bits (2236), Expect = 1.980e-254 Identity = 1518/3651 (41.58%), Postives = 1749/3651 (47.90%), Query Frame = 1
Query: 682 SPPSSSPERSRSLTRPRLTVASALAGRSQSLT-------------LASDSINNDVTVGGTVRRRGGLATPYSKQQR--SGLHRRCVSFSDDVVXXXXXXXXXXXXXXXXXXXDIYGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXGEGDAGEVVSPVESTSSSNLPDSLLMVPTXXXXXXXXXXXXXXXGXXXXXXXQRGR-ETSVADWQQLGIASRTAPRGSQSASAVPGGGDGRRGVEIDQXXXXXXXXXXSEAGTSVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHEPYATVDIAANLPPDSNRKTRKAAXXXXXXXXXXXXXXXXXXXXXXXXXEAVRGA--RASSGQIVSRSQRQQQLQPARSRSLDNHERGSRSSGSXXXXXXXXXXXXXXXXXXERRASTTVSHSRXXXXXXXXXXXX-------DALTKQHKSKFEIWREAEQMDASGTRPERAQXXXXXXXXXXXXXXXXXXXSGSIDPASGPWPLWAHANIVNSKGVSSSGGGSXXVGRAXXXXXXSNLSITRSS-----------------------SWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSWXXXXXXXXXXXXXXXGFGGPLPSPVPEESXXXXXXXXXXXXXXXXXXSG-------RTKSSNSRGFVRPVRARRAASSATKDAATLSDDSNGXXXXXXXXAAIVDNSSEMDLLDPARWGATPPGAAG-----------------VNEPISPASRLFNSLAISVRQAAADGVGG----GGDAMLRRAAAALNNADETPDRGGVVGV-GVGNNNNFGRRVLVQRQDTNRRWPAGPKNFSQGSSIFDSVASGELDQQEXXXXXXXXXXXXXLVKQRTLE----EVASNSEGSDASAELNSLGTTDAGSSPLSASPDHSGARGTN-------PSAASVLGHSSGSPMRVAISALEEEEEGGDVVGGDNEVGSGDLAGGGTGRSRRHSRDGGSIS----FDAQGSGSTTPANESSSSTASLRA-DSVPDKWNWHKSFGTAESVNQPQLGMSSGGNTS--PVTTPKSASSPRSETSND------DSARQRPAPLQVQRSPPVGRLEQSPLLHGSWERKPPRGSTTASPRVVTPMAV--AHEREGEXXXXXXXSAGEGDSVEV----VSFGDEVLSALTTPAPTWRQPTWSSEPKQSAMAQDSKEDPADFAVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSRAKKLMASPLKKSWLSKSLGIFS---RGGRQLQSNRKVAVGQGDDKEEMHEXXXXXXXXXXXXXXXXXXXXXXXXXEEQAATVQGAKDATAAAVTADEPQLHGEEKRELHQGVSPPGAEAAVAKGAGEAEATVIDVAADVGEAAIDAAGGEVAAGVNIAGEGEAEVIDXXXXXXXXXXXXXXXXXXXXXXXXXRKEVEAANAXXXXXXXXXXVAREKPKQGELELNGPLNGPLDRQQSAXXXXXXXXXXXXXXXXXXXXXXXXXERKVKELQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEVEEMLRQAEAAKEEATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNVDSQGSESQQDGKLPGK------------------------TSSQESPPELEQLSSGVEXXXXXXXXXAPS-------------SLLQKLTG---WLPKKQETSSNATA-------TSELDVETAAVDDGGVSCCGDGGDGGEDQLCRPLHREXXXXXXXXXXXXXXXXXXXGGEIAGRPVPTVAAQPKAMAAVETPQKETESRAAEVQQQVGKSVADEPVAAQQPPAEANNAEHHQQSVLAGVAWQPPSISPQMPPPLLHQLSQRGEHELRKKEEREXXXXXXXXXXXXXXXXXXXXXAPPAVRILAKPRAAEQPSRTASPPGRPSPEVSPPKLSQLVQKRNGHTPQQXXXXXXXXXXXXXXXXXXXXXXLTLDLPKERIEQQKQPAVKPRPSARVRLLPSPQELARRRAARALQLQKLLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKTPPQLKESVLGQAHAQQDEEQQNQPLPAPQNLEGKMHEVEPLLSPRPAPFPRPALPAAIATLASPLGGGSSSEDTPTGSGGEMEVAARVPIAAGELRQEQQQKPGEDESRLMNTLSVERDVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKEALAGVPRLSSTPWAVGEAEAADIARAATAAALSAVXXXXXXXXXXXXXXXXXXXPDRQDSNAEGSGGGSAVGGDRSTGISGGDDADGNTSSSSRKNIIGSVEAGSLMSAPDQEAVRAWLKRGVTVKKWTAGGSGTRKRKLWLE---------SADESALSLGVAGGRRGAEEDQGSPWLAWAKEGLL--NGAGXXXXXXXQEPWEGEDGALVLVLQSDKGDDTAHRLRNLRAVAEDAGDKSVTLSFE--GSGDRAEGKMKLSFQTDKPVVLFFRQVVANSERHARITRAAKTSLSAIEAVASARAVSAAAQDTSSRWRRSSYLEEMEEACMNGDVVESQVNSSAAAASHLEDSRAAREEIEGVVNVLTRFDHGLKPSPAVVLSNAEDIEEEANRRFRGDVRRVLSVVKLAVACRGAKEAAEFCRKLKHHQQVSAVMWETPSVASIVKSSNGGFPGIKAFVKLKASKHVVEVELQSEKFHTTAGMDYKALEWARALRKPVPSIDPCVRFDQLRGPVQQRMVDLARQDWMGLRRVLPQLLRATGDVAEAEQILRQNASEEKAVCVLAGTVGD------ARTASVVALASARTELAGLLHEQGKLLEAEELYRSALDLRTAALGMEHPSVGLSATXXXXXXXXXXXXXXXXXXXXXXMNIAASPPRLPQXXXXXXXXXXXXXXXXXPWSHSALMVSRXXXXXXXXXXXXXXXXXXXXXDDHDGXXXXXXXXXXXXXXXXXXXGADEVGIMVMARATSSRRAPNPPMASPPVGDVLLDDKAAPKNPPASSAVPVPLSALSASPFSVKSDGGDTRGFVDAGHIRGDNDYTTVAAVGPSTAAXXXXXXXXXXXXXXXXXVTAVDPTAXXXXXXXXXXXXXXXXXXXAGVDAKTATXXXXXXXXXXXXXXXXXXXLTTLEQSVEVK----MVAAKEKEMVEEEKSGRD--WELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLEFLARMAIQSGKTFTEMEGLINRLVEVREACLTKSNAPPAVEGRRQVGSVMSDLALALRQQRQEQATRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEVMTALGKLPQAEELHRRALKIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSASRSRGRNFISASGRSGSSSWGSKEW 11088
S P+ +PERSRSLTRP TVASALAGRS SLT RRRGGLATP S R HRRCVSFSDDVV XXXXXXXX + GE D +SP S +SS L SL XXXXXX XXX RGR +SV +WQ LGIA S XXXXXX S+AG+S A XXXXXXX E V IAAN PPDSNR+TRKAA XXXXXXXXXXXXXXXXXXX VR A R SSG R XXXXXXXXXXXXXXXXXX VSHSR XXX +A++ +H+S ++W E MDA+GTRPER +GS+DPA PWP+ HA+I + GVSS S GR XXXXXX S SW XXXXX XXXX XXXXXXXXXXXXXXXX XXXXXXXX GFGG LPSPVPE S XXXXXXXXXXXXXXXX G + K+ NSRGFV+PVR R S K+A SD A + D + WGA PG +G V+ PISP SR+FN +A S+++A A G GG GDA LRRA AAL +A P G G GN N+ RRVL++RQ+T RRWP+G K+FSQGSSIFDSVAS ELDQ++ XXXXXXXXXXXX + AS+++GS +AEL SLGTT+AGSSPLS + G+ + PSAASV+ S + R A++ALEEE+ G+V G+ VGSGDLAGGGTG R GS S FD Q S STTPAN+S SS AS + D +KW SFGTA P++G SS NTS P+ TP+S+++ + DS +PAP Q SP RL + P PR+ + + + ++ +G S E F +EVLS + W + K +A + XXXXXXXXX XXXXXXXXXXXXXXXXXXX + A+ KSWL+KSLG RG RQ XXXXXXXXXXXXXXXXXXXXXXXXX E + A AA+A+ E E XXXXXXXXXXXXXXXXXXXXXX K E +E+ + EL+ ++Q++A XXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EAE EMLRQ + XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX +D + QQ+ P K S Q SPP+L+QLSS V + S L+KLT W P+ ++ T+ +V+ +V GG ++Q P+ G A P V AVETP E R E + P+A QP + ++ Q VAWQ P +SPQ+PPP+L QLSQR E ++ P ++P+ S TA P + SP+VSPP+L QL Q +Q XXXXXXXXXXXXX K R R+RLLPSP E A+RR+A Q Q+ E XXXXXXXXXXXXXXX KTP Q KE V QA+AQQ EQ+ + P++LEG++ E EPL SPRPAP PR A+A G G AA A G L+ +Q ED + N L+ DV A+ XXXXXXXX +A +P L+ TPWAVGEAEAADIARAATA AL A XXXXXXXXXXX SGGG DG + + GSV +GS ++ DQ+ V AWL+ GVTVKKWTAGG+GTRK +A ES L+ GG A G PW WA+ G+ NG+G + +GE +LVLQSDKG D AHRL NLR V+ED +KSVTLSF+ G GDR KMKLSF T+ PV +FRQV + +ITRAAKT+L A+E A ARA+SAAA+DT+SRW S LEE+EEAC+ GDV+E+Q + + AASHL+DSR AREEIEG+V LTRFDHGLKP PA+VL+ E IEEEA R +GDVRRVL+VVKL V CRGAKEAAEFCRKLK H QV AVMWE + I+K+SN GF GIKA V+L+ASKHVVEVELQSEKFH TAGMDYKALEWARAL+ PV + DPCVRFD++R PVQQRMV LARQDWMGLRRVLPQLLRATG+V EAE++LRQNASEEKAV V+AG GD ART S VALASAR+ELAGLLHEQGKLLEAEELYR A+ T + P A+++S +D + XXXXXXXXXXXXXXXXXX PP G+ GG L +EQ +E+K EEKSGRD WELAHSVAVASLNNLAVLLSEQGDAEQAE FHRRALRARE+VHGPDHPD+PLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFLARMA+QSGKT+TEMEGL+ RL REA LT SNAPPA+EGRRQVGSVMS+LALALRQQ+QEQATRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAE+MTAL KLPQAEELHRRALKIR XXXXXXXXXXXXXXXXXXXXX IRS +RSRGR S S RS SSWGSK+W
Sbjct: 34 STPTFTPERSRSLTRPATTVASALAGRSSSLTGGGXXXXXXXXNXXXXXXXXXXXXXXAPPRRRGGLATPSSPSTRRSKNAHRRCVSFSDDVVGGEEEDADXXXXXXXXEVMEYVRFDDD-----------------------------GEDDDYPDISPQGSVTSSTLSGSLASX-----------XXXXXXXXXXHRRLDRGRGASSVVNWQSLGIAG-------LSVDDXXXXXXXXXXXXXXXXXXXXXYDGVSDAGSSSAPSVATPRKKRGKMRWKYASSYSSXXXXXXXS------------------EERTVVHIAANEPPDSNRRTRKAARKLAEDXXXXXXXXXXXXXXXXXXXXXVREACARRSSGSGGVRXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHSRSSGGSGGVGXXXXXXXXXXEAISTRHRSPAQMWGAVEPMDATGTRPERTTARQNRGQRGRGARPGSEGATGSVDPAGVPWPV-VHASIAS--GVSSLSATSTISGRGXXXXXXXXXHHRNGSADLGGGGSXXXXIRXXXXXXXXVSWGXXXXXSDYSSXXXXSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXSARGSSLGFGGLLPSPVPEGSEXXXXXXXXXXXXXXXXGWGFGREDRPKAKNKNSRGFVKPVRVRTVVS---KNARPESD----------AAAEAGTGGTAADFKN--TWGAAQPGGSGXXXXXXXXXPAAGAGADVSTPISPESRMFNDVAESLKRAVAGGTGGVRSSEGDAKLRRAIAALESA-AVPAAAATDGSRGFGNGNS--RRVLLERQETGRRWPSGSKHFSQGSSIFDSVASQELDQRDEXXXXXXXXXXXXXXXXXXXXXXXXDAASSADGSLLNAELYSLGTTEAGSSPLSGVDNGHGSGEADQTGSAVYPSAASVIDDSKPAARR-AMAALEEEDSSGEVNEGNEGVGSGDLAGGGTGXXXXXXRRIGSSSRNFKFDGQQSDSTTPANDSCSSAASTKGGDGYSEKWALQNSFGTA-----PEMGSSSA-NTSATPMMTPESSAADETRLRQASFGYRRDSTSDQPAPRHEQ-SP---RLPRVPXXXXXXXXXXXXXXXAGRPRLASSKELESSSSKDVPMPGVEVKDGVDGGSFEEDEEGARFANEVLSVEMPMPMVPKGRRWGEKEKAAA----------EVXXXXXXXXXXXXXSNPPSAAATPTASGASVSGASAAKRLSQGTPPPAPRLDDPPTMVQDSKEXXXXXXXXXXXXXXXXXXXGAKGDLATAAAETAPKKVPMKSWLTKSLGSLGKLQRGSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEAT---------------AAAAMAR--------------------------------------ELEEXXKVKXXXXXXXXXXXXXXXXXXXXXXLKLKEGRELDSNEDKGGPERLQEERELMELQ---------NKQRAAAAEADEASAVAERALAAAHXXXXXXXXXXXXXXXXXXXXXAAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAE--EMLRQHQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKAXXXXXXXXXXXXXXXXXXXXXXXXXLDEFLREQRLKERQAELERQKQAEKAAAILLSQSRNQVGYQVHERPEALDEEEWRLQQESLAPVKGNDDASEDSSVEEDSQSRAGGLSDPSPQVSPPQLKQLSSAVAVAVAPPQEAVAAPPAAASTPARPEKSFLRKLTEKLEWFPQNEQQRXXXXXXXXXXXKTTSPEVKEESV--GGTGAVPHDHKSQQEQAAEPVEA---------------------GPAATAGAPQVXXXXXXXXAVETPM---EDRVQE----------EHPIA--QPAKDKDD-----QLARTDVAWQTPGVSPQVPPPILDQLSQREGFESQRT--------------------PAPTAKPEPEPATSQPQQQLPASSTADVPAKVSPQVSPPQLQQLSQAVGKVMHRQRSQEXXXXXXXXXXXXXNTR-------------------AKQRRPGRMRLLPSPHEFAKRRSASLQQGQQSTEPSPDAXXXXXXXXXXXXXXXLLQLPKPQASQEEVVPDA--------------------------KTP-QSKERV--QAYAQQQREQRAHDVLGPRSLEGEIQEAEPLRSPRPAPSPRAPQQQAVAGWMRMTPGRRXXXXXXXQPGDGRRSAADAEGAPG-LKPPEQADEKED-AVAANALAAAGDVPASKXXXXXXXX----------------------------------------------------VATMPDLNRTPWAVGEAEAADIARAATADALHAKAAEEQXXXXXXXXXXXD------------SGGG-----------------DGEAGREAHALVSGSVGSGSWVTVADQDRVHAWLRGGVTVKKWTAGGTGTRKXXXXXXXXXXXXXSLAAQESQLAATAPGGSSVAAGGGGMPWSTWAQGGVTDSNGSGAG------DTLDGELDGWMLVLQSDKGKDVAHRLSNLREVSEDVVEKSVTLSFDDGGKGDR---KMKLSFPTELPVANYFRQVHETRTQEEKITRAAKTALVALETGAHARAISAAARDTASRWTTHSSLEEIEEACLGGDVIETQPSLAVGAASHLKDSRPAREEIEGIVKGLTRFDHGLKPLPAIVLTTVEAIEEEAKRYHQGDVRRVLNVVKLVVVCRGAKEAAEFCRKLKCHTQVKAVMWERLPQSPIMKTSNFGFTGIKASVELEASKHVVEVELQSEKFHNTAGMDYKALEWARALKVPVSTSDPCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQNASEEKAVRVIAGRAGDGEDGELARTQSAVALASARSELAGLLHEQGKLLEAEELYRHAM---TVPEHSQRP-------------------------------------------------------------FDAVLLS------------------FLDDEDEESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGN----------------------------------SGG-----------------------------------------------------------------------------------------------------LLVVEQELEIKGQXXXXXXXXXXRASEEKSGRDRDWELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFLARMALQSGKTYTEMEGLVIRLANAREARLTVSNAPPAIEGRRQVGSVMSELALALRQQKQEQATRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEIMTALNKLPQAEELHRRALKIRQYTLGEDXXXXXXXXXXXXXXXXXXXXXHAGDLLLRRAGEIRSPARSRGR-MKSYSRRS--SSWGSKDW 3080
BLAST of mRNA_P-littoralis_Contig84.28.6 vs. uniprot
Match: A0A6H5KEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH7_9PHAE) HSP 1 Score: 252 bits (643), Expect = 3.470e-71 Identity = 179/208 (86.06%), Postives = 189/208 (90.87%), Query Frame = 1
Query: 10207 EEKSGRDWELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSLEFLARMAIQSGKTFTEMEGLINRLVEVREACLTKSNAPPAVEGRRQVGSVMSDLALALRQQRQEQATRAFPLFRRVFLSDEKILGCYHPLVAEDVVNLAEVMTAL 10830
EEKSGRDWELAHSVAVASLNN+AVLLSEQGDAEQAE FHRRALRARE+VHGPDHPD+PLLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FLARMA+QSGKT+TEMEGL+ RL REA LT +APPA+E VGSVMSDLALALRQQ+QEQATRAFPLFRRVFLSD KILGCYHPLVAEDVVNLA +MTAL
Sbjct: 78 EEKSGRDWELAHSVAVASLNNVAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLARMALQSGKTYTEMEGLVIRLANAREARLTGCDAPPAIE----VGSVMSDLALALRQQKQEQATRAFPLFRRVFLSDAKILGCYHPLVAEDVVNLA-IMTAL 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.28.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig84.28.6 >prot_P-littoralis_Contig84.28.6 ID=prot_P-littoralis_Contig84.28.6|Name=mRNA_P-littoralis_Contig84.28.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=3527bp MAQESGWQHKGIRRDRRHFSSDAATAAAAALAFGSAGSPPSSSPERSRSLback to top mRNA from alignment at P-littoralis_Contig84:143840..180918- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig84.28.6 ID=mRNA_P-littoralis_Contig84.28.6|Name=mRNA_P-littoralis_Contig84.28.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=37079bp|location=Sequence derived from alignment at P-littoralis_Contig84:143840..180918- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig84:143840..180918- >mRNA_P-littoralis_Contig84.28.6 ID=mRNA_P-littoralis_Contig84.28.6|Name=mRNA_P-littoralis_Contig84.28.6|organism=Pylaiella littoralis U1_48|type=CDS|length=10581bp|location=Sequence derived from alignment at P-littoralis_Contig84:143840..180918- (Pylaiella littoralis U1_48)back to top |