mRNA_P-littoralis_Contig82.15.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 3.180e-140 Identity = 227/281 (80.78%), Postives = 251/281 (89.32%), Query Frame = 1
Query: 1573 HAAAVALQRAWRQRRRYMIAKELKQYKFCHQQREEMRAGLHVDCDACASAGKKSADMRARFLKKAYKDTDELLFKGMARVQMSDRGDNWNERWQEALSLPNGSNMERGYRRSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGVGLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAE 2415
HAAAVALQRAWR+R Y+ K+LKQ K C R+EMRAGLHVDC+AC+SAGKKSAD+++R KKA+KDTDELLFKGMARVQMSDRGDNWN+RWQEALSLPN + M+ Y+R SLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGG+AGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYL TGVGLC+PPMCLLDYKGFRMLAQAHLPLG SLKMGT+DGG+TVLND P LD++ A AAKALGLRAH+ G + WV ++ E
Sbjct: 12 HAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI--GPRDWVGVQEEE 290
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.560e-67 Identity = 133/258 (51.55%), Postives = 164/258 (63.57%), Query Frame = 1
Query: 1798 GMARVQMSDRGDNWNERWQEALSLPNGSNMERGYRRSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPA-----LDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPEDP 2553
G+ RV++ D GDNWN +QEA +LP + MER Y+ L VY DF AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y GV GL PMC+LDYKGFRM+ A LPLGA +L G+ DGG V+ A L+E AAR L LR H G +++ ADVE H+G D +Y+LDLAR+ PPEDP
Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVGVGDAEVARVLEEAAAR----LRLRPHPCRG------------------------TTVYSGADVEVHKGLDGNLYMLDLARSMPPEDP 248
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 232 bits (592), Expect = 2.440e-59 Identity = 152/345 (44.06%), Postives = 194/345 (56.23%), Query Frame = 1
Query: 1783 ELLFKGMARVQMSDRGDNWNERWQEALSLPNGSNMERGYRR-SSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPEDPDATPHLSGMLSVSAKVIVRKEGQKAKAGTVTKA------HDTLVDYDILYQ---DGTMEKATPA-HLLRDLRLFIFYRLLRPEFVR 2781
EL+F + G NWNE +Q AL LP + ++ YR+ L V DF TAVTYG+TIISEYFL KS++ K LGGVAGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP+ SL+ G+ +GGKTV N+ +L +K AAK L LR H V + +++A D+EGH G YLLD AR FPPE P HLS +LS V V G + G + H+ Y I+YQ D + E + D +++R+LRPEFV+
Sbjct: 231 ELVFPDDMEQAYRETG-NWNELFQSALDLPEET-PDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTHRVNDKD------------------------MYSACDIEGHVGEGDSHYLLDFARTFPPESPKKVEHLSDILSDMTPVYVHI-GDPPEKGIILSVTVPLDMHNLARKY-IMYQVQLDSSNEVIEVCGDKVSDRHQSVYWRMLRPEFVK 547
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 208 bits (529), Expect = 6.790e-57 Identity = 121/243 (49.79%), Postives = 152/243 (62.55%), Query Frame = 1
Query: 1834 NWNERWQEALSLPNGSNMERGYRR-SSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPEDP 2553
NWNE +Q AL LP + ++ YR+ + V DF AVTYG+TIISEYFL KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL + GL CL+DYKGFRM AQA LP+ + +L+ G+ D G+TV NDS L +K AK L LR H WV ++ +++A D+EGH G YLLD AR+FPPE P
Sbjct: 10 NWNELFQSALDLPEDT-PDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH-------WVNDKE-----------------MYSACDIEGHVGEGGSHYLLDFARSFPPESP 227
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.290e-49 Identity = 108/217 (49.77%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 1909 SLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARS-LKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPEDP 2553
+L A+ DF+ AVTYGRTIISEYFL E KSV P +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA ++L+GA +K + GL L+DYKGFRM AQA LPL +R+ L+ G+ D G TV++ AL K A L L+AH R GG L DVEGH GTD +Y++D AR FPPE P
Sbjct: 22 ALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAH-----------------------RGRGGAELQLGCDVEGHRGTDGNLYVIDAARVFPPESP 215
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: D7G5H0_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H0_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.400e-39 Identity = 103/259 (39.77%), Postives = 147/259 (56.76%), Query Frame = 1
Query: 5839 PLSPDALTAFSNGDPEAKERNREVTEATKLLVTVLVPATAKLLCSMPRHHLMKINLAQELHKYGVNVRHIGLLRAYVTPSKGGASSYAVSXXXXXXXXXAGKSSKTSAGIMRDRALVEVVVRTLKLVLRSFQRQWMKSEQSSSEQGMHMLVAQFLNLVTGQHERSRLFWHEYVTTGVCQRFGTVALTDSERAGLWTVCSDRPDLLLTMVKELVKVTGVRFKESVNKQLRSKSAKTVIVGFKFSLNDIRDIEAVVTPMAI 6615
PLSPDALT F+ G + ERN+E+ +AT ++ VP + L S+P+ ++L ELH++GVNVRH+G +R + + +K +++D L E++ RTLK +LR FQR WMK+E+S+SEQGM MLV +FLNLVTG H S FW + V TGV QRFG V+LT SER + + S P +L V +L ++ GV E + S VGF+F ++DI +I+ +V M I
Sbjct: 171 PLSPDALTFFTKGSTDRAERNQEIHDATAAMLEAAVPNVVEKLTSLPQDVQKTLHLDVELHRHGVNVRHLGRVRYLLM-----------------------EQNKPENELLKDMMLTEMIARTLKNILRCFQRTWMKAERSTSEQGMRMLVVRFLNLVTGAHVNSATFWKKNVLTGVLQRFGLVSLTTSERRDVQKI-SRNPCVLQDCVFKLTEMQGVELTEDAKAHFYADSP----VGFEFMVSDIHEIKPIVRYMHI 401
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.730e-39 Identity = 109/288 (37.85%), Postives = 154/288 (53.47%), Query Frame = 1
Query: 1837 WNERWQEALSLPNGSNMERGYRRSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGVG-LCVPPMCLLDYKGFRMLAQAHLPL-------GARSLKMGTDDGGKTVLN----DSPALDEKAA-------------------RAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLH------AAADVEGHEGTDSRMYLLDLARAFPPEDPDATPHLSGMLSV 2589
WNER+Q L LP+GS+ E+ +R + L A Y+DFV TA TYG +ISE FL+E +K++ + + G+AGG+KY +RGI FKLA G + PYGG AA+KA GHEL+GA+ Y + V L +P L+DY+G+R+LAQ LP+ +LK+G+ + V + + P AA RA AL + A+ + A +A + + + Q AA DVEGHEG D Y++D ARAFPPE P+ + SV
Sbjct: 30 WNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPIKPGKSLENPGTLKVGSAKACEVVFSVEQEEEPTAPPIAATKPGRYPQPYPLLPREPLRRAGSALLMPAN-----ERIFALMEAASNELNIAPHQVFCQTTRKPVKVPAAFDVEGHEGMDGLFYVVDFARAFPPEAPNLAEQMHESASV 311
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: A0A2P6NJP1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJP1_9EUKA) HSP 1 Score: 167 bits (422), Expect = 3.820e-37 Identity = 102/241 (42.32%), Postives = 140/241 (58.09%), Query Frame = 1
Query: 1837 WNERWQEALSLPN--GSNMERGYRRSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGVG-LCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPED 2550
WN+++Q+ L N ER S L + DFVH A TYG+ IISE +L + K++KP +GG AGG KY+ +GILFKLA S G YG SD AAAK AG++L+G +Y G+ L P M L+DY GFR+ A + LP+ + ++ GT +GG+TV + + + K A K LGL H VG +Y K + L++ AD+EGH+G D R YL+D AR+FPP D
Sbjct: 702 WNQQFQQILENLNLCDDAQERSTIYSQLSNLAQDFVHYAKTYGKLIISELYLPDDQKTIKPNDIGGFAGGVKYVVKGILFKLAVDSHGLYG-SDMAAAKVAGNDLKGLVQYFNLGISRLHFPLMALVDYMGFRIQALSLLPINSDTIIYGTANGGRTVFDKNLKFNAKMRLAGKKLGLSPHTVG---------------LYPKTS----KTLYSCADMEGHDGKDGRFYLIDFARSFPPID 922
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: A0A6H5KFE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE7_9PHAE) HSP 1 Score: 159 bits (402), Expect = 5.200e-36 Identity = 88/171 (51.46%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 2044 KYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPEDP 2553
K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP+ SL+ G+DDGGKTV ND +L +K AAK L L H V + +++A D+EGH G D YLLD AR FPPE P
Sbjct: 2 KFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSDDGGKTVHNDDESLAKKLKAAAKKLNLCTHRVNDKD------------------------MYSACDIEGHVGEDGSHYLLDFARTFPPESP 148
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Match: Q54YP3_DICDI (Clu domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54YP3_DICDI) HSP 1 Score: 161 bits (407), Expect = 1.940e-35 Identity = 99/238 (41.60%), Postives = 139/238 (58.40%), Query Frame = 1
Query: 1837 WNERWQEALSLPNGSNMERGYRRSSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGVAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLKTGV-GLCVPPMCLLDYKGFRMLAQAHLPLGARSLKMGTDDGGKTVLNDSPALDEKAARAAKALGLRAHVVGGRQAWVAFRDAETGSVYKKKRNLGGQVLHAAADVEGHEGTDSRMYLLDLARAFPPE 2547
WN +Q + +N GYR L + DFV+TA YG+ IISE L ++K++KP +GGVAGG KY+ GILFKLA SQG Y G D+ A KAAGHEL+G Y V GL P M L+DY+G+R++A + LP+ + ++ G+ DGG +V N ++K +AK L ++ H+VG K ++ L L++ D+EGH G+DS+ YLLD AR FPP+
Sbjct: 393 WNAEFQNLVY----NNKIEGYRE--LSKLAHDFVYTAKIYGKVIISELTLPLHLKTIKPINIGGVAGGHKYIALGILFKLALDSQGLYVG-DQNAMKAAGHELKGLMSYYNCRVEGLHHPLMALIDYRGYRLVAMSLLPINSDTIVYGSSDGGISVHNSDEDFNQKMIESAKILNIKGHMVG-----------------KDEQKL----LYSCGDIEGHIGSDSKRYLLDFARVFPPQ 602 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.15.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.15.4 >prot_P-littoralis_Contig82.15.4 ID=prot_P-littoralis_Contig82.15.4|Name=mRNA_P-littoralis_Contig82.15.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1668bp MIAKELKQYKFCHQQREEMRAGLHVDCDACASAGKKSADMRARFLKKAYKback to top mRNA from alignment at P-littoralis_Contig82:98677..129343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.15.4 ID=mRNA_P-littoralis_Contig82.15.4|Name=mRNA_P-littoralis_Contig82.15.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=30667bp|location=Sequence derived from alignment at P-littoralis_Contig82:98677..129343+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:98677..129343+ >mRNA_P-littoralis_Contig82.15.4 ID=mRNA_P-littoralis_Contig82.15.4|Name=mRNA_P-littoralis_Contig82.15.4|organism=Pylaiella littoralis U1_48|type=CDS|length=5004bp|location=Sequence derived from alignment at P-littoralis_Contig82:98677..129343+ (Pylaiella littoralis U1_48)back to top |