mRNA_P-littoralis_Contig801.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5KMW0_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW0_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.950e-52 Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = -1
Query: 1 SAPPQSLLAPRPKLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKNPSVKALAAEGAVVVH 351
S+ PQ L APRPK+GD FS S LR+A+ERAML R++++D R GGH ++YRCSGAIIEKG KTTGGCQ+HVKANKRADKHFYVTS +DHQNCAGG K PSV+A+AAEGAVVV
Sbjct: 13 SSTPQPLYAPRPKIGDCFSSSVELRVASERAMLRDNRTMIADARGGGGHAKLYRCSGAIIEKGSKTTGGCQAHVKANKRADKHFYVTSVCYDHQNCAGGTKKPSVRAMAAEGAVVVR 129
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5K387_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K387_9PHAE) HSP 1 Score: 176 bits (446), Expect = 7.080e-52 Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = -1
Query: 1 PQSLLAPRPKLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKNPSVKALAAEGAVVVH 342
PQSL PK GD+F+ + LRIA ERAML +GR++VSDHRVTGGH R+YRCSGAI+EKG K TGGCQ+HV+ANKR DKHF+VTSASF+HQNC GGKK PSV ALAAEGA VVH
Sbjct: 16 PQSLTVTPPKFGDAFACTRSLRIAAERAMLASGRTLVSDHRVTGGHQRLYRCSGAIMEKGTKNTGGCQAHVRANKRRDKHFHVTSASFEHQNCVGGKKKPSVAALAAEGAAVVH 129
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5JMR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR7_9PHAE) HSP 1 Score: 147 bits (371), Expect = 4.940e-42 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = -1
Query: 1 SERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKNPSVKALAAEGAVVVH 291
S LR+A+ERAML R++++D R GGH ++YRCSGAIIEKG KTTGGCQ+HVKANKRADKHFYVTS +DHQNCAGG K PSV A+AAEGAVVV
Sbjct: 53 SVELRVASERAMLRDNRTMIADARGGGGHAKLYRCSGAIIEKGSKTTGGCQAHVKANKRADKHFYVTSVCYDHQNCAGGTKKPSVGAMAAEGAVVVR 149
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5JAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT0_9PHAE) HSP 1 Score: 131 bits (329), Expect = 4.410e-34 Identity = 66/120 (55.00%), Postives = 91/120 (75.83%), Query Frame = -1
Query: 1 SSNSAPPQSLLAPRPKLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKNPSVKALAAEGAVVVH 360
+S++AP SL A PK+GDSF+ + LR+ ERA+L GR++VSD R G H +++RCSGA+I KG+++TGGCQ ++ANKR DKH+Y+T ++H +CAGGKK PSV ALA EG VVV+
Sbjct: 13 TSSAAP--SLSATLPKVGDSFACTRSLRLGRERALLSQGRTLVSDFRKGGSHAKLFRCSGAVIVKGQQSTGGCQVLIRANKRKDKHWYITETQYEHSSCAGGKK-PSVAALAKEGEVVVN 129
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5JDI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI5_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.700e-29 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = -1
Query: 97 SAPPQSLLAPRPKLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFY 351
S+ PQ L APRPK+G+S S LR+A+ERAML R++++D R GGH ++YRCSGAIIEKG KTTGGCQ+HVKANKRADKHFY
Sbjct: 13 SSTPQPLHAPRPKIGES---SVELRVASERAMLRDNRTMIADARGGGGHAKLYRCSGAIIEKGSKTTGGCQAHVKANKRADKHFY 94
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5JX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX21_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.290e-9 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = -1
Query: 46 KLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKN 315
+ G FS S + A ER M+ T R D RV+GG G+++RC+GA+I K T GC +A K D + VT DH C G N
Sbjct: 28 RYGQIFSSSREFKRAIERCMISTSRQCRLDKRVSGGRGKLHRCTGAVING--KATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGN 115
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 3.840e-9 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = -1
Query: 46 KLGDSFSGSERLRIATERAMLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAGGKKN 315
+ G FS S + A ER M+ T R D RV+GG G+++RC+GA+I K T GC +A K D + VT DH C G N
Sbjct: 28 RYGQIFSSSREFKRAIERCMISTSRQCRLDKRVSGGRGKLHRCTGAVING--KATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGN 115
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Match: D7FZQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ7_ECTSI) HSP 1 Score: 53.1 bits (126), Expect = 5.500e-6 Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = -1
Query: 16 MLVTGRSIVSDHRVTGGHGRMYRCSGAIIEKGKKTTGGCQSHVKANKRADKHFYVTSASFDHQNCAG--GKKNPSVKALAAEG 258
M+ R D RV+GG G+++RC+GAII K T GC + K+ D + VT DH C G G K + EG
Sbjct: 1 MISQSRQCRLDKRVSGGRGKLHRCTGAIING--KATSGCPVRARGCKQTDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEG 81 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig801.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig801.13.1 >prot_P-littoralis_Contig801.13.1 ID=prot_P-littoralis_Contig801.13.1|Name=mRNA_P-littoralis_Contig801.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp VDDHRAFGGEGLYAGVLLTAGAVLVIEGSAGDVEVLIGALVGFDVRLASSback to top mRNA from alignment at P-littoralis_Contig801:99940..100332- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig801.13.1 ID=mRNA_P-littoralis_Contig801.13.1|Name=mRNA_P-littoralis_Contig801.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig801:99940..100332- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig801:99940..100332- >mRNA_P-littoralis_Contig801.13.1 ID=mRNA_P-littoralis_Contig801.13.1|Name=mRNA_P-littoralis_Contig801.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig801:99940..100332- (Pylaiella littoralis U1_48)back to top |