mRNA_P-littoralis_Contig80.72.22 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: D7FSL6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL6_ECTSI) HSP 1 Score: 541 bits (1394), Expect = 8.440e-175 Identity = 288/364 (79.12%), Postives = 308/364 (84.62%), Query Frame = 1
Query: 1171 NSALTRSWRAFPQKNPQGVLLEAPVSAGTCDCLEFGDYADVLFVHKLDEQ---VGVLVSRAWGSSLLSAKSTASPEGWFTRWLWMTTGGSVVYALWAGLTSAVSCRCCRSPAHDDELNNVEKGLGPTSADMPARVTSVVASFDAWLFADSKVLWAVLISEIFKQVEEHDCFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGAAAGLAGEHIANMQEQLEQVAAAAALAAVPISLLLWICKILPVVFKGQGELILRQAQSMG-ESVGTAHLGFMADVQDELQVLLGMLERKSTKEHRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDKVNAAVILAMDPRVIIAAIEEDMGEGMRRE 2250
N L+RS R FP K+ QGVLLEAPVS+ DCLEFGDYADVL D VGV V WG+ + T SPE WF RWLW TTGGSVVYALWAGL SAVSCRCCRSPA DD +N+VE GLG TSAD PARVTSVVASFDAWLFADSKVLWAVLISEIF QVEEH CFGKGAVRATRVRHAVTSSTC+DWCLVIFTAV+VAGV AAA LA E IANMQE LEQV A A LAAVPISLLLWI K+LPVVFKGQGELI+ +AQSMG ESVG AHLGFMADV+DEL+VLLGMLE+KSTKE RYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKD VN AV+LA+DPRVIIAAIE+DMGEG+R+E
Sbjct: 271 NIGLSRSSRPFPTKDHQGVLLEAPVSSEGPDCLEFGDYADVLVERMTDPAAWPVGVGVYAQWGAG--KSAPTPSPEWWFIRWLWTTTGGSVVYALWAGLASAVSCRCCRSPARDDRVNDVEDGLGSTSADQPARVTSVVASFDAWLFADSKVLWAVLISEIFHQVEEHPCFGKGAVRATRVRHAVTSSTCSDWCLVIFTAVIVAGVVAAAKLAAEQIANMQEVLEQVVATAGLAAVPISLLLWIFKVLPVVFKGQGELIVEEAQSMGDESVGIAHLGFMADVRDELEVLLGMLEQKSTKEDRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDNVNVAVMLALDPRVIIAAIEQDMGEGIRKE 632
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6H5JLB7_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB7_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 6.460e-129 Identity = 313/742 (42.18%), Postives = 398/742 (53.64%), Query Frame = 1
Query: 1240 PVSAGTCDCLEFGDYADVLFVHKLDEQ---VGVLVSRAWG---SSLL-------SAKSTASPEGWFTRWLWMTTGGSVVYALWAGLTSAVSCRCCRSPAHDDELNNVEKGLGPTSADMPARVTSVVASFDAWLFADSKVLWAVLISEIFKQVEEHDCFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGAAAGLAGEHIANMQEQLEQVAAAAALAAVPISLLLWICKILPVVFKGQGELILRQAQSMGESVGTAHLGFMADVQDELQVLLGMLERKSTKEHRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDKVNAAVILAMDPRVIIAAIEEDMGEGMRREVSGAEYLDKIIHWPFCIPSGTETERLSLLRSWLPSQDSESPPDTLGTDDVDP-DQPREERPSQGDNDANPNREPIETEEVQNRLSRPV----------EPRNAT------------PPVGG---HTEPLDSEDSSGAVSDGNDTESEEKETDAGTSTGVGTPGSS----VGGDRAPFAAGGEAAPPLQRQTSNYAMHTKEEVEELEKMIKAIVTTPRKAKRIYNIYSIQRALARKRASKDNAYDFSRDSARKLLRWTILSEFWPFHTACLVAVVKNTKDT---------GTLFHLYETEGAEFLSDMLNGKRSSNADLDSMTDSNNPFRAEARRLMGFEEADEDFVRVLSFTPDLLVQDFDE--DKLGLLRLSFNLNPAMVARVVAWKRSNW 3303
P S D L+F YA+VL D V + + WG SSLL + S F R+L GSV WAGL + C P DD + +P VT ++ASFDAWLFADS VLWA L+S+IF QVE H CFGKGAVR+ R+R + T C AV+V G+ A GL E + L + A LA VPIS++LW K LP VF+GQGE+IL +A+SM ESVG+A LGFMADVQ+E+Q+LL M+ +ST++ ++ LVVSIDNLDRCPHR IVKVLEAVHLLLE+D+ N VILA+DPRVII+AIE D+G +R+EVSG+EYLDKIIH PFC+P GT+ +RL+L+ SWL + D G+ ++ D PS G R I T +V+ R +PR + VGG H + + SD + E++ T + +S+ T + V GD T + H E +E + K IVTTPRK KRI NIY IQRALA+++ S DF SARKLLRW L EFWPF TACLV K DT L +Y ++ + MLN + +D S R+E RRL+G +E+D+ F+RVL TP L V DF E D LGLLR SFNLNPAMVA V AW RS +
Sbjct: 157 PSSLELQDKLDFDKYAEVLVERLRDPDTWPVSLGIYAQWGAGKSSLLRLILERFERITKVSEPSCFVRFLRSNILGSVFLEAWAGLRGCCVAKLC--PPTDDTVP------------VPVPVTCILASFDAWLFADSDVLWAFLVSKIFDQVEAHPCFGKGAVRSFRLRKTSSEITMERLCFAAMGAVIVVGLAVALGLIIEATGGLDNVLTKALAFVGLAGVPISIVLWTIKALPAVFQGQGEVILNKAKSMHESVGSARLGFMADVQEEIQILLDMITDRSTEKMKFALVVSIDNLDRCPHRNIVKVLEAVHLLLERDQTNVVVILALDPRVIISAIEADLGPEVRKEVSGSEYLDKIIHVPFCVPFGTQKQRLTLIDSWLGVTKGVTKSDENGSKTLEGGDGSSLCEPSSG------KRPEIGTGDVRAASERAALMGDGSAAGGDPRGSAIGASVGGTCSMPEEVGGRAAHQRSAEQIVNPNPRSDSKTPDLEDQTTLSRSSSTAATDSRNSLRNVAGDD------------QVDSTGSSPFHIPGETDEFHMLCKEIVTTPRKMKRILNIYGIQRALAKEQTS-----DFRSTSARKLLRWAALCEFWPFRTACLVGSAKLAIDTREEDLGDKSAPLQFVYMERTSKVMKTMLNETQK----VDDEPRSGGFSRSEVRRLLGMDESDQAFLRVLQATPLLCVGDFMEGQDCLGLLRFSFNLNPAMVATVGAWVRSEF 857
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: D7FSL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL5_ECTSI) HSP 1 Score: 239 bits (610), Expect = 2.630e-69 Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 2836 YSIQRALARKRASKDNAYDFSRDSARKLLRWTILSEFWPFHTACLVAVVKNTKDTGTLFHLYETEGAEFLSDMLNGKRSSNADLDSMTDSNNPFRAEARRLMGFEEADEDFVRVLSFTPDLLVQDFDEDKLGLLRLSFNLNPAMVARVVAWKRSNW 3303
YSIQRALAR+RA K+N + F+RD ARKLLRWTILSEFWPFHTACLVAV K +K+TGTL +LYET+GA+FLSDML KRSS+ D SMTD+N FRAEARRLMGFEE+DE FVRVL F PDLLV+DFDEDKL LLR SFNLNPAMVARVVAW R+ W
Sbjct: 7 YSIQRALARRRADKNNGFKFTRDRARKLLRWTILSEFWPFHTACLVAVAKKSKETGTLANLYETKGAKFLSDMLTDKRSSDGDQASMTDANTSFRAEARRLMGFEESDEAFVRVLGFAPDLLVEDFDEDKLMLLRHSFNLNPAMVARVVAWDRARW 162
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6H5K326_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K326_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.340e-55 Identity = 135/317 (42.59%), Postives = 187/317 (58.99%), Query Frame = 1
Query: 1393 WFTRWLWMTTGGSVVYALWAGLTSAVSCRCCRSPAHDDELNN------VEKGLGPTSADMPARVTSVVASFDAWLFADSKVLWAVLISEIFKQVEEHDCFGKGAVRATRVRHAVTSSTCTDWCLVIFTAVVVAGVGAAAGLAGEHIANMQEQLEQVAAAAALAAVPISLLLWICKILPVVFKGQGELILRQAQSMGESVGTAHLGFMADVQDELQVLLGMLERKSTKEHRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDKVNAAVILAMDPRVIIAAIEEDMGEGMRREVSGAEYLDKIIHWPFCIPSGTETER 2325
WF RW+W G L T+ ++ + + DD +N +EK + T VVASFDAWL+AD+++LWA L+ +F +VE FGK +VR RVR+A T D C A ++ VGA A + + E V VP ++L + KG+GE IL QA+SMG+SVG++HLGFMA+V++ELQ+LL M++ T++ ++ LVVSIDNLDRCPH IV+VL+AVH LLEK N +ILA+D RV+IAAI M + +R+ VSG+EYL+KII+ PF IP GT +R
Sbjct: 22 WF-RWIWRFFGRFAHGVLLGDQTALLNIVRNKLRSDDDGNDNDQSSTDIEKQQTKRPRSDGKKTTCVVASFDAWLYADTQLLWARLLCGVFVKVEAR--FGKFSVRRARVRNAFRDPT-LDVCAAAALATLL--VGAVAQAIADEVG-----WEDVGNVLGYGGVP--------RVLYIAIKGRGENILAQARSMGKSVGSSHLGFMAEVEEELQLLLDMIKDMGTEKEKFALVVSIDNLDRCPHDDIVQVLQAVHFLLEKPGANFILILALDSRVVIAAIGAGMDDLVRQRVSGSEYLEKIIYVPFFIPDGTMEDR 319
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6H5KKB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB9_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.950e-45 Identity = 87/118 (73.73%), Postives = 96/118 (81.36%), Query Frame = 1
Query: 2950 PFHTACLVAVVKNTKDTGTLFHLYETEGAEFLSDMLNGKRSSNADLDSMTDSNNPFRAEARRLMGFEEADEDFVRVLSFTPDLLVQDFDEDKLGLLRLSFNLNPAMVARVVAWKRSNW 3303
PFHTACLVAV K +K+TGTL +LYET+GA+FLSDML KRSS+ M D+N FRAEARRLMGFEE+DE FVRV F PDLLV+DFDEDKL LLR SFNLNPAMVARVVAW R W
Sbjct: 5 PFHTACLVAVAKKSKETGTLANLYETKGAKFLSDMLTDKRSSDGSPAFMIDANTSFRAEARRLMGFEESDEAFVRVSGFAPDLLVEDFDEDKLMLLRHSFNLNPAMVARVVAWDRGRW 122
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI) HSP 1 Score: 106 bits (264), Expect = 7.830e-21 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 1 MPSTDRDALVALYNATDGANWTNNGNWDKGADLSLWHGIKMNDQGRVVELRLPENNLRGPIPPELGDLAALEYLIL 228
MP TDRDALVALY+A G NW NNGNW+ ADLS WHGI +NDQGRVVE+ L NNL+G IP LG L+ LE L L
Sbjct: 51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERLWL 126
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.260e-19 Identity = 45/72 (62.50%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 MPSTDRDALVALYNATDGANWTNNGNWDKGADLSLWHGIKMNDQGRVVELRLPENNLRGPIPPELGDLAALE 216
M TDRDALVALY AT G NW + NWD ADL WHG+ +NDQGRVV+L+L +NNL G IP LG LA L+
Sbjct: 1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 2.630e-19 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 MPSTDRDALVALYNATDGANWTNNGNWDKGADLSLWHGIKMNDQGRVVELRLPENNLRGPIPPELGDLAALEYL 222
M + DR AL+AL+ +TDGANW N NWD A+L+ W G+++ND+GRVV+L LP+NNL GPIP LG L L +L
Sbjct: 1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHL 74
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6P5A1I9_BRABE (kinase D-interacting substrate of 220 kDa-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A1I9_BRABE) HSP 1 Score: 105 bits (262), Expect = 4.310e-19 Identity = 83/278 (29.86%), Postives = 139/278 (50.00%), Query Frame = 1
Query: 1540 TSADMPARVTSVVASFDAWLFADSKVLWAVLISEIFKQVEEHDCFGKGAVRATRVRH-AVTSS-----TCTDWCLVIFTAV---VVAGVGAAAGLAGEHIANMQEQLEQVAAAAALAAVPISLLLWICKILPVVFKGQ-GELILRQAQSMGESVGTAHLGFMADVQDELQVLLGMLER-KSTKEHRYMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDKVNAAVILAMDPRVIIAAIEEDMGEGMRRE-VSGAEYLDKIIHWPFCIPSGTETERLSLL 2337
T+ P V + F+AW ++ LWA +++++ +VE G R R H TSS T W ++ T + V+ + G +G++ + + +V AA AL A +S I L + Q L+ R + + LGFMA V+ E+ V+ +L +S + +Y ++V +D+LDRCP +++KV+EAV +LL + +LA+DPR+++ +IEE GE M+ ++G EYL K++ P C+P ER L
Sbjct: 623 TNLPNPGHVKIIHVQFNAWEYSGCSALWAGIVTKLCDEVEGE--IGPWTTRLYRAIHDKFTSSERPPVTGRLWFKLLVTVILGTVLIVLAVVFGFSGDNPIAIATSIVEVLAAVALGAGMLSNATKIWSFLRKMAVSQTARLVARTTKPNFDQ----ELGFMAKVKTEVNVITYLLRYFESARRKQYRVIVVVDDLDRCPKDKVIKVIEAVGILLSDPNSHFISLLAVDPRIVVKSIEESFGEVMKNSNINGYEYLKKMVQLPICLPDPGAQERKRFL 894
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 8.650e-19 Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 1 MPSTDRDALVALYNATDGANWTNNGNWDKGADLSLWHGIKMNDQGRVVELRLPENNLRG 177
M STDRDALVALYNAT+G W+ N NW+ GA LS WHG+ +NDQGRVV L L ENNL+G
Sbjct: 1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQG 59 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.72.22 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig80.72.22 >prot_P-littoralis_Contig80.72.22 ID=prot_P-littoralis_Contig80.72.22|Name=mRNA_P-littoralis_Contig80.72.22|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1102bp MPSTDRDALVALYNATDGANWTNNGNWDKGADLSLWHGIKMNDQGRVVELback to top mRNA from alignment at P-littoralis_Contig80:510476..539105- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig80.72.22 ID=mRNA_P-littoralis_Contig80.72.22|Name=mRNA_P-littoralis_Contig80.72.22|organism=Pylaiella littoralis U1_48|type=mRNA|length=28630bp|location=Sequence derived from alignment at P-littoralis_Contig80:510476..539105- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig80:510476..539105- >mRNA_P-littoralis_Contig80.72.22 ID=mRNA_P-littoralis_Contig80.72.22|Name=mRNA_P-littoralis_Contig80.72.22|organism=Pylaiella littoralis U1_48|type=CDS|length=3306bp|location=Sequence derived from alignment at P-littoralis_Contig80:510476..539105- (Pylaiella littoralis U1_48)back to top |