mRNA_P-littoralis_Contig8.100.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.100.1
Unique NamemRNA_P-littoralis_Contig8.100.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A7C3H372_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3H372_9CHLR)

HSP 1 Score: 277 bits (709), Expect = 7.740e-87
Identity = 150/260 (57.69%), Postives = 187/260 (71.92%), Query Frame = 2 
Query:   35 VLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALLLAADGRDGVEL 814
            + LKLGGSLI+DKT  EA+R +VL R+A E+++A     D  R+V+GHGSGSFGHVA A++GT  GV    QW GF EVS +A RLNRLVT ALL AG+PA+SLQP AS VC  G++ ++A  PI+AAL +G++PV+HGDVAFD   GGT+ STEE+   LV  + P WLLLAGETEGV    G  + +I PE+LP VE +LGGSRGTDVTGGMA+KVR ML+LV   P  R+RIFSGL P D+   +L   D   G E+
Sbjct:    4 IFLKLGGSLITDKTGVEAVRADVLTRLAEEIQQARQANPDL-RLVLGHGSGSFGHVAGAKYGTRQGVRTAQQWRGFAEVSAAALRLNRLVTEALLAAGVPAVSLQPCASVVCEDGRITAIAAHPIQAALTSGLLPVIHGDVAFDTVRGGTIVSTEEVMMALVETLRPSWLLLAGETEGVLDLAGQVIPRIMPETLPQVEAALGGSRGTDVTGGMAAKVRDMLALVTEQPAMRIRIFSGLTP-DLLPRVLAFPDTAVGTEI 261
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BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A0S8AVD4_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8AVD4_9CHLR)

HSP 1 Score: 271 bits (692), Expect = 2.810e-84
Identity = 142/250 (56.80%), Postives = 182/250 (72.80%), Query Frame = 2 
Query:   32 LVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALL 781
            L+ LKLGGSLI+DKTR E LR EVL+R+  E+REA+S   +  ++V+GHGSGSFGHVAA ++GT  G+    QW GF EVS +AARLN  V  +LL   +PA+SLQP+ASA CR G+++++ T  +KAA+EAG+VP+V+GDVAFD  LGGT+ STEEI +FL  ++ P WLLLAGETEGV   DG  +  IT  ++  ++  L GSRGTDVTGGMASKV  ML LVE  P   V IFSGL+ G++   LL
Sbjct:    6 LIFLKLGGSLITDKTREETLRVEVLNRLVSEIREALSSKPEL-QLVLGHGSGSFGHVAANKYGTRQGIHTQDQWKGFAEVSSAAARLNAQVRESLLVKNVPAVSLQPSASAECRKGRIVNMGTTQVKAAIEAGLVPIVYGDVAFDSVLGGTIISTEEILSFLAADLRPTWLLLAGETEGVLSDDGRIIPLITKSNIGQIQNQLSGSRGTDVTGGMASKVNQMLELVEKDPNLSVLIFSGLKGGNISGRLL 254
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BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A160T015_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T015_9CHLR)

HSP 1 Score: 270 bits (689), Expect = 7.170e-84
Identity = 145/245 (59.18%), Postives = 176/245 (71.84%), Query Frame = 2 
Query:   26 SRLVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPG 760
            S L+ LKLGGSL++DKT  EALR + L R+A E+  A +      R+V+GHGSGSFGHVA ARHGT  GV G AQW GF EV+D+AARLNR V AALL AG+PA+ L P+ASA+   G +  LA API+AAL AG+ PVV GDVAFD   GGT+ STEE+  +L   + P W LLAGETEGV   +G  +  IT  +LPS   +LGGSRGTDVTGGMA+KV  M++LVE+ PG  +RIFSGL PG
Sbjct:    2 SDLIFLKLGGSLLTDKTGTEALRADTLQRLAAEIAAARAA-DPQLRLVLGHGSGSFGHVAGARHGTRAGVVGPAQWAGFAEVADAAARLNRHVIAALLAAGVPAVGLPPSASALVSDGYIRELAVAPIQAALAAGVTPVVFGDVAFDAARGGTIISTEEVMDYLAARLRPAWFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKVAAMVALVEANPGLAIRIFSGLIPG 245
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A6L3F9Z2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F9Z2_9CHLR)

HSP 1 Score: 267 bits (682), Expect = 7.990e-83
Identity = 137/249 (55.02%), Postives = 179/249 (71.89%), Query Frame = 2 
Query:   32 LVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLAL 778
            L  LKLGGSLI+DKT  EA+R +VL R+ +E+ +   +     ++++GHGSGSFGHVAAA++GT  GVS  ++W GF EVS +AARLNR+V  AL  AG+PA++LQP+AS VC  G++  +AT PI+ AL+AG++PVVHGDVAFD   GGT+ STEE+   +   + P WLLLAGET GV   +GT + KIT ESLP +  +LGGSRGTDVTGGMASKV  ML L++      +RIFSGL  G ++  L
Sbjct:    4 LTFLKLGGSLITDKTSVEAVRFDVLTRLCQEIAD-FRQTNPEIKLLMGHGSGSFGHVAAAKYGTRQGVSSPSEWAGFSEVSSAAARLNRIVVDALQEAGVPALTLQPSASVVCENGRIAQIATTPIQHALDAGLLPVVHGDVAFDTVRGGTIISTEEVMMAVAETLQPSWLLLAGETAGVLDQNGTIIPKITRESLPEIASALGGSRGTDVTGGMASKVNSMLQLIDEHSQLNIRIFSGLNEGQLRTTL 251
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A2E0ZCB3_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZCB3_9CHLR)

HSP 1 Score: 267 bits (682), Expect = 2.120e-82
Identity = 140/253 (55.34%), Postives = 185/253 (73.12%), Query Frame = 2 
Query:   35 VLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALLLAAD 793
            + LKLGGSLI+DKT+ E +R +VL R+  E+ +A  E     R+V+G GSGSFGHVAAA+HGT  GV+  A W GF EVSD+AARLNR+V + LL  G+PA+SL P+AS  C  G++ ++A  P++AAL AG+VPVV+GDVAFD   GGT+ STEE+   LV E+ P WLLLAGET GV+  +   +S+I+  +   +E +LGGSRGTDVTGGMASKV+ ML+LV++ P   +RIFSGLEPG++   LL  A+
Sbjct:   31 LFLKLGGSLITDKTKVERVRHDVLTRLVEEIAQARRE-NPALRLVLGQGSGSFGHVAAAKHGTRHGVTDAAGWRGFAEVSDAAARLNRMVVSELLLVGVPAVSLSPSASVGCVDGRIQTIAVQPVQAALAAGLVPVVYGDVAFDSVRGGTIVSTEEVMMALVAEIRPSWLLLAGETTGVYDLEEQVISRISRANYAEIEAALGGSRGTDVTGGMASKVQSMLALVDAFPQLAIRIFSGLEPGNLAQTLLNPAE 282
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BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A3B0VP81_9ZZZZ (Isopentenyl phosphate kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VP81_9ZZZZ)

HSP 1 Score: 266 bits (680), Expect = 2.870e-82
Identity = 140/249 (56.22%), Postives = 181/249 (72.69%), Query Frame = 2 
Query:   35 VLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALL 781
            + LKLGGSLI+DKT  E++R +VL R+A E+ EA  + G + R+++GHGSGSFGHVAAA+HGT  GV+  A W GF EV D+AARLNRL+  ALL AG+PA+SL P+ASAVC+ G++  +    + AAL+AG++PVV+GDVAFD   GGT+ STEE+   +VG + P WLLLAGET GV+      +  I+  +   V   LGGSRGTDVTGGMASKV+GMLSL+E  P   +RIFSGLE  +V+  LL
Sbjct:   16 IFLKLGGSLITDKTEAESVRRDVLTRLAAEIAEARRKNG-SLRLLLGHGSGSFGHVAAAKHGTRQGVATPAGWRGFAEVGDAAARLNRLLMTALLAAGLPAVSLPPSASAVCKNGRIQQIGVENVAAALDAGLLPVVYGDVAFDSVRGGTIVSTEEVMMAMVGRLRPSWLLLAGETAGVYDRQQQVIPTISQTNYAEVATVLGGSRGTDVTGGMASKVQGMLSLLEQFPHLSIRIFSGLESNNVRQTLL 263
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A3M1ZMT5_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZMT5_9CHLR)

HSP 1 Score: 254 bits (650), Expect = 4.690e-78
Identity = 138/248 (55.65%), Postives = 174/248 (70.16%), Query Frame = 2 
Query:   35 VLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLAL 778
            + LKLGGSLI+DKT  EA+R +VL R+A E+ +A +       +++GHG GSFGHVAAAR+ T  GV   AQW GF EVS +  RLN  +    L+AG+PAI LQP+ASA+CR G+L+ L T  +  AL+AG+VPVVHGDVAFDE  GGT+ STEE+  FLV  + P WLLLAGETEGV   +G  +  I P++   +   LGGSRGTDVTGGMA+KV+ M++L   LPG +VRIFSGLE G V   L
Sbjct:    3 LFLKLGGSLITDKTAVEAIRRDVLQRLAAEIYQAKTLQ-PALELLIGHGGGSFGHVAAARYQTRQGVRTAAQWRGFAEVSAAMNRLNTELINTFLQAGVPAIRLQPSASAMCRDGQLVQLDTTAVLTALQAGLVPVVHGDVAFDEVRGGTIISTEEVMDFLVARIRPFWLLLAGETEGVLDDEGRVIPHIHPDNFAQIAPLLGGSRGTDVTGGMAAKVQAMVALAGRLPGLQVRIFSGLESGVVAQVL 249
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A7C1YTM8_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1YTM8_9CHLR)

HSP 1 Score: 254 bits (649), Expect = 8.570e-78
Identity = 142/249 (57.03%), Postives = 174/249 (69.88%), Query Frame = 2 
Query:   35 VLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALL 781
            + LKLGGSLI+DKTRP   R +++ R+ARE+REA  +  D  R++ GHGSGSFGH AAA +GT  GV    QW G+  VS +AARLNRLVT ALL AG+P +SLQP+ASA CR G L+ L T PI+ AL  G+VP+V+GDVA DE  GGT+ STE++FA+L G +SP+ +LL GE  GV    G  +S I P + P+V   L GSRG DVTGGMA KV  M+ LVE  PG  V I SGLEPG V  ALL
Sbjct:    7 LFLKLGGSLITDKTRPYTPRMDLIRRLAREVREAQEKEPDL-RLLAGHGSGSFGHQAAAPYGTRQGVHTPEQWQGYAYVSAAAARLNRLVTDALLEAGVPVLSLQPSASARCRSGVLLHLETDPIREALAHGLVPLVYGDVALDEVHGGTIVSTEDLFAYLAGILSPQRILLVGEAPGVLDEHGDVISFICPSTFPTVRPLLSGSRGVDVTGGMADKVARMVGLVEDRPGLIVHILSGLEPGLVCRALL 254
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A2G6GE47_9CHLR (Isopentenyl phosphate kinase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2G6GE47_9CHLR)

HSP 1 Score: 249 bits (637), Expect = 3.950e-76
Identity = 136/250 (54.40%), Postives = 170/250 (68.00%), Query Frame = 2 
Query:   32 LVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPGDVKLALL 781
            ++ LKLGGSLI+DKT  EA+R  VL R+ +E+  A  E     R+VVGHG GSFGHVAAA+  T  GV    QW  F EV  + ARLNRLV  ALL AG+PA+SLQP+A  +C  G++  + TAP+ AAL AG+VPV++GDVAFD E+GGT+ STEE+   L   + P WLLLAGE  GV    G  V KIT  +   ++ +LGGSRGTDVTGGM SKV+ ML+LVE      +RI +GLE G V+ ALL
Sbjct:    3 VIFLKLGGSLITDKTGVEAVREAVLGRVVKEIAAARRE-NPALRLVVGHGGGSFGHVAAAKSHTRQGVRTAEQWHDFAEVHAAMARLNRLVVEALLAAGVPALSLQPSAGVLCENGRIKQIETAPMLAALAAGLVPVIYGDVAFDSEIGGTIVSTEEVVMALADALQPTWLLLAGEVPGVLDGQGEVVPKITAVTFDDIKPALGGSRGTDVTGGMTSKVQSMLALVEKQAALSIRILTGLESGVVQGALL 251
[Close]
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Match: A0A399Z2D2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A399Z2D2_9CHLR)

HSP 1 Score: 249 bits (637), Expect = 4.360e-76
Identity = 136/245 (55.51%), Postives = 170/245 (69.39%), Query Frame = 2 
Query:   26 SRLVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTTRVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTAALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVAFDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITPESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPG 760
            S L+ LKLGGSL++DKT  EALR +VL R+A E+  A +E     R+V+GHGSGSFGHVA  +HGT  GV   AQW GF EV+D+AARLNR V AALL+ G+PA  L P+ASA    G++  L +  I+ +L+ G++PVV GDVAFD   GGT+ STEE+  FL G + P W L+AGET GVF      V++I   +   +  +LG SRGTDVTGGMASKV  M+ LV+S PG  VRIFSGLEPG
Sbjct:    3 SDLIFLKLGGSLLTDKTTKEALRADVLARLAGEIAAARAER-PAMRLVLGHGSGSFGHVAGKKHGTRQGVKTPAQWTGFAEVADAAARLNRHVIAALLKEGVPAFGLPPSASAQVMDGQVEFLMSEQIEKSLDVGLLPVVFGDVAFDAVRGGTIISTEEVMEFLSGGLRPAWFLMAGETTGVFDVHNQVVAEINRVNFQDILPALGASRGTDVTGGMASKVSSMIDLVQSQPGMTVRIFSGLEPG 246
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3H372_9CHLR7.740e-8757.69Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A0S8AVD4_9CHLR2.810e-8456.80Isopentenyl phosphate kinase n=1 Tax=Anaerolineae ... [more]
A0A160T015_9CHLR7.170e-8459.18Isopentenyl phosphate kinase n=1 Tax=Candidatus Pr... [more]
A0A6L3F9Z2_9CHLR7.990e-8355.02Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A2E0ZCB3_9CHLR2.120e-8255.34Isopentenyl phosphate kinase n=1 Tax=Anaerolineace... [more]
A0A3B0VP81_9ZZZZ2.870e-8256.22Isopentenyl phosphate kinase n=1 Tax=hydrothermal ... [more]
A0A3M1ZMT5_9CHLR4.690e-7855.65Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A7C1YTM8_9CHLR8.570e-7857.03Isopentenyl phosphate kinase n=1 Tax=Chloroflexi b... [more]
A0A2G6GE47_9CHLR3.950e-7654.40Isopentenyl phosphate kinase n=2 Tax=Chloroflexi b... [more]
A0A399Z2D2_9CHLR4.360e-7655.51Isopentenyl phosphate kinase n=1 Tax=Anaerolineae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:451657..458163 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog926550.CLDAP_05580
PFAMsAA_kinase
Model size1557
Max annot lvl200795|Chloroflexi
KEGG rclassRC00002
KEGG koko:K06981
KEGG ReactionR10093
KEGG Pathwayko00900,ko01110,ko01130,map00900,map01110,map01130
Hectar predicted targeting categoryother localisation
Exons7
Evalue6.51e-62
EggNOG OGsCOG1608@1|root,COG1608@2|Bacteria,2G6TH@200795|Chloroflexi
Ec32 ortholog descriptionaspartate/glutamate/uridylate kinase
Ec32 orthologEc-27_003730.1
EC2.7.4.26
DescriptionPFAM aspartate glutamate uridylate kinase
Cds size1386
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.100.1prot_P-littoralis_Contig8.100.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 451818..458153 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791636.1928978-UTR-P-littoralis_Contig8:451656..4518171680791636.1928978-UTR-P-littoralis_Contig8:451656..451817Pylaiella littoralis U1_48UTRP-littoralis_Contig8 451657..451817 -
1680791636.2966707-UTR-P-littoralis_Contig8:458153..4581631680791636.2966707-UTR-P-littoralis_Contig8:458153..458163Pylaiella littoralis U1_48UTRP-littoralis_Contig8 458154..458163 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791636.208272-CDS-P-littoralis_Contig8:451817..4523521680791636.208272-CDS-P-littoralis_Contig8:451817..452352Pylaiella littoralis U1_48CDSP-littoralis_Contig8 451818..452352 -
1680791636.21901-CDS-P-littoralis_Contig8:452443..4526191680791636.21901-CDS-P-littoralis_Contig8:452443..452619Pylaiella littoralis U1_48CDSP-littoralis_Contig8 452444..452619 -
1680791636.2299116-CDS-P-littoralis_Contig8:453183..4533311680791636.2299116-CDS-P-littoralis_Contig8:453183..453331Pylaiella littoralis U1_48CDSP-littoralis_Contig8 453184..453331 -
1680791636.2402735-CDS-P-littoralis_Contig8:454016..4541411680791636.2402735-CDS-P-littoralis_Contig8:454016..454141Pylaiella littoralis U1_48CDSP-littoralis_Contig8 454017..454141 -
1680791636.2537615-CDS-P-littoralis_Contig8:454444..4545591680791636.2537615-CDS-P-littoralis_Contig8:454444..454559Pylaiella littoralis U1_48CDSP-littoralis_Contig8 454445..454559 -
1680791636.2683253-CDS-P-littoralis_Contig8:454774..4549511680791636.2683253-CDS-P-littoralis_Contig8:454774..454951Pylaiella littoralis U1_48CDSP-littoralis_Contig8 454775..454951 -
1680791636.278909-CDS-P-littoralis_Contig8:458043..4581531680791636.278909-CDS-P-littoralis_Contig8:458043..458153Pylaiella littoralis U1_48CDSP-littoralis_Contig8 458044..458153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.100.1

>prot_P-littoralis_Contig8.100.1 ID=prot_P-littoralis_Contig8.100.1|Name=mRNA_P-littoralis_Contig8.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=462bp
MEEDRSRLVLLKLGGSLISDKTRPEALRGEVLDRIARELREAISEWGDTT
RVVVGHGSGSFGHVAAARHGTIDGVSGDAQWMGFCEVSDSAARLNRLVTA
ALLRAGIPAISLQPAASAVCRGGKLISLATAPIKAALEAGIVPVVHGDVA
FDEELGGTVASTEEIFAFLVGEMSPRWLLLAGETEGVFGADGTCVSKITP
ESLPSVEESLGGSRGTDVTGGMASKVRGMLSLVESLPGTRVRIFSGLEPG
DVKLALLLAADGRDGVELTPDRTSRGVSSGGNGGWLCPLAAKRLGELKIT
SRRPKYYLVQSLAGPAFFKMSYIRYDIAIYLNPRATAARRSSDFLRVVDS
ALDVCCPAIYTSSPSRFGNIGIVASLFAAAIPNLLNDEVTIANAYSRKTE
ISESPPFSRPVPLKATVLFMTAVRGRHVENIGERLFERVVCFDMTNSTSG
VLSGDPPREEE*
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mRNA from alignment at P-littoralis_Contig8:451657..458163-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.100.1 ID=mRNA_P-littoralis_Contig8.100.1|Name=mRNA_P-littoralis_Contig8.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6507bp|location=Sequence derived from alignment at P-littoralis_Contig8:451657..458163- (Pylaiella littoralis U1_48)
CTCAAACAAGATGGAAGAGGATAGATCGCGGTTGGTGCTTTTGAAGCTCG
GCGGAAGCCTAATCTCGGATAAAACAAGGCCAGAAGCTCTACGGGGAGAG
GTTCTGGACCGAATTGCCAGGTGCGTGTGACTGCAGCAAACTGGAAATAA
ACCCTGTCCTCCACACCTTTTCGTTCACGCATGTGTATACGGTATCTGGG
TGTTCAGGATCGTGTCGCGACCCCTTTGATGAGTGATTTATCTTCGGCGA
TGGGGTCGTTAGTTGTTTCTTGCCCCAAAATGTCTGCTGTATTCAAAACA
TCAGTGTACTGCTTTTGGGCATTGCCGTACACAGAGAGAGCCTATAGACT
ACGATGATATGATTCGATGTTCAGAATGTACTTCCCCAGGAGGGCAAAAA
ATTAGCCTCCCTCTTGTCGCCGCGGCTCTCGTCTCAAAATACCGGTATCG
CTATAAACGGTGCAAGTTGACCTCTGTTCAGTCCAGCCCACGTTTGGAAC
GCGCTTGTCTGGGTCTCGAGCTCCAATCGCCTATGACCATTGAAATCGTC
TCTCAACTCTCTTTGTATTGCGGACAAAGGAGAAAAATTAGACAATTTCA
GATCAAGGCAACGATGACAACACAACAAGATTCAAAACAACCCGTTAATA
CTCCGGAGTAATATTACTGTAATTCTTCGCCTTTTGCATCCATGTGACAG
CCATCTACGAGAGGGGCTCCGCGACGAAGGTGTCGCGGCACGAGGCTCGA
TTATCATCGTGATGCTGCTGTAACCCAACTCACGGCAACCCTCGATCCCC
CCCAAAATTATGACACCAGAAACGACGATATAAAGGGTTGTGAATCGATT
GGGTTTGTTCCTGTTTTAAACATCGATTATCCGAGCAGCCGAAATACCGA
TGTATCGAGCGCAGCGAGCGGATGAGTGAATGCGAGGGAGCTCGCTGTGC
GAGCCCCCCCGGCCCCCCCGGCTGGTGAGGGGGCCCCGCTGGAGGCGCCC
CGTCGGAGGCGAAAAAATTGGGCCATTTGGCTTCATTTCCCATCACAATC
CGTGCGAAATCGAAGGATTTAAAGGGACGCGTTTAGCCTAGGATTGATTA
AAACAAGAAATTAAAAGGTGGTTACCATGCAAAAATAAAATAAAAATGAA
GCTCGCAATATATATGCTGTGGAGGTGGGAAAGCCTTCACGGGTACCAGC
ACACATCAACAAACAGTACAGTGGCGCATAAATTATACTCCGAGTAAATT
ACTTGGAAGTATTAATTATTACGTGATCGACATGTCATTCCTCTCAAACG
TCTACGATGGAACTGCACAGCGAGTTGATATACTACGAGTGCAAAGGCTG
TGGTCAAGGACCGGCGTGGTTTACGGCGAGATACAGGGGTTGGGTCAGGG
TGCTCAGGGATGCTGCTGGCGCTGGGCATGCGGATGTGGTCATAACCTGT
CTAGATTCGTGGTGGGAGTATACGGATAGCATAACGCAGGCCGCTGCAAG
TGAGGGGCGATCGAACGTCATTGGTGCGTCGGAGAAGAGGGGCCACTCAT
GCACTCAAAGTATGCGCGAAGCGGCTCAGTCAGTTGCCGCTGACGGGGAT
GAGAATGATGGTTCATCTGTCATGGGAAAGTTTGACACGCCACGTTGTCC
ATGTGGGTGGGATGGCTTCCAATATGTGCAAGAGGGCGGAGGGGGGGGGT
TCGTCATAGACTCGAAGGTGCGTGTGTTTTTTTTCGGAAATTTCGTGAAC
ATTACACATTGAACATTAAAAATGTGGGGAGGCCTCTTCGTTTCGCCATT
TTACGCCCAATGATGATGAGAAGCAAAGCAGTGTTTTCTACTCCGGCGGT
CCCTCCTGCCAGACCCCTGGCCAGCCGGGGGGGGAGGGGTTGGGGAAATT
CCACAGCGACCCGCCACGTATTATCGTTCGATCGATCACTGTGCTCCATT
GGTCTCACTCATCCTCTTGCTGCGCTCGCTTTCGGCTTCGCCGAATTTAT
CGTCAAAAATGTCGTTGTCGGTCCCCAAGCTAGCCACAAGTTGTGTGTAT
TCAGTCATGTGTTCTCGCCACCCACGCGCCTAAACGTCCCAGGGCTCATT
ATCAAGCACGCATATGGTCTCATGCACTTGCGGGGAGCCCTGTGGCAGGT
CTGGAATGCCGTAAACGCCTTCGTAGAGGCTCCAAACGCCTAAATATCGG
CAAAACATCGAAAAAACATCGAAAAAACATCGACCCGATTCGTCGATACC
GATTAGTAAACATATATCGCGATGTAATCGGGTGAATCGATTTCGATTCA
CAACCCTAACGATATATCATCACAGTACTTCGTATTATACAAGCTGGTCC
GGCCAAGAAGCCCACATTGTGTCAGATGCTCGTAACTTTGCCGCCTTTAC
GATTCATCTCAAAGCAAAGACATTGCCGTGATCGGCAGACTCAGGCGCTG
ATGATGGAACTCTGTATCAGTTCATAGCGGAGGATTCTCCAATAGAAGCA
TATTTTGAGGCTTGAAACCGTCAAAAACCATCAACAATAAAAAAAAAATG
CGGCGAAATTACGCAATTCGGAGCGCATCAAGGCACATCACAGCAGCACA
CCTCTCTCGACAGCGCGCTGTGTATGGCTACGGACGCGCAGAACACCCAG
CGGTGGGAGAGTACCTCTGCCCCCGTGATAAATCATGACAAAAGTGCAGA
TCGTTGGCGACTCGAGCTGAACTATACCCCCAAGAAGAAAACTGCGAGGA
AGAGGTCCGCATGGTACACCACGCGCGAGGAGGCTGAAGTATTTCGCCCA
TTTTCCTCTCACGAAGGCAATTTTGAAAATCGACCACGCGCCGCTGGGTT
TTTCGAGTTAGAACTTAAAATTTTGAGACGTTATTTGAAACAATCTCATC
AAGACACCACCGGAAAACCCTAAGCGGTTTTTTTTTTTTCGCCGACTTAC
GCCCGTGTTTGTATTCCTGAAAAAGTGGAAGTTGGCCGTAACTCAGGAAA
AAAAAAAACAGTGCTTAGGGTTTTCCGGTGTCGTCTTGGGGAGAACATTC
CAAATCACGTCTCCAAAATTTAGGCTCTACCTCGAAAAACTCAGCGGCGC
GTGGCCGTATTGGCGAGTCCCAGCTGTCTTGGCCGGACCAGCTTGTATGT
ACGAAGTACTTTAGTATTTTGTGCGCCACTTACCAACATTACGGTCGTCC
TACTGTACGCAGGGAGTTACGAGAGGCCATCTCTGAGTGGGGTGACACAA
CAAGGGTTGTCGTGGGCCACGGGAGCGGTTCGTTCGGACATGTCGCCGCC
GCCAGGCATGGCACCATAGACGGCGTATCAGGGGATGCTCAGTGGATGGG
GTTCTGCGAAGTGAGCGATTCGGCGGCTCGCCTCAATAGGTACTTACACA
GTTTGTGTTCTGCTGCTGCTGCTGCCGCCGTTCCTTGCAAGGGTGACGAT
ACAGCTCCCAAGAACTAGGTGATATGTTCTGCTACTGCTGCTTCTACTGC
TGCTGGTGCTGTTTGTTTCATTGCAAGAGGTGACAGGGAAAGTCCCTTGC
AAACATGTGTCGGTTCATATGTGTACGTCGGTCGCCGCGCGCGGGAACGC
GCAGGTTGGTGACCGCGGCGCTGCTCAGGGCGGGGATTCCGGCGATAAGC
CTGCAACCGGCGGCATCAGCGGTTTGTCGGGGGGGCAAGCTTATTTCTCT
TGCGACGGCGCCGATCAAGGTACTGCTGTACAGTATGCACAATAGAAGAC
AGCACAAAGCAGACCTCGCCCTCTGGGACATCAATCGAGACCACAACTGT
TGGAGCGTTCGCTCTAGTAGTACAGAAATAACGAGCACGGTGTGATACTA
GTTATGTCTGTAAAACAAGAGGCCTGTTGTAGAAGAAGAACGACAGTGAA
GGACGTACTTTCGCAGCATGAAACACCTGTGACCTACCGTTTATTTTCAT
CGTCGATATTCTCGGTTGACTGCACGCTTATTGTGTGTCAAGACTACTGA
ACGCTTTCGTACATCAATTCAGGCGGCGTTGGAGGCGGGTATCGTTCCTG
TGGTGCACGGCGATGTTGCTTTCGATGAGGAGCTGGGGGGCACCGTGGCA
TCTACGGAGGAGATTTTCGCTTTTCTGGTGGGGGAAATGTCACCACGGTG
AGAAAGAGGGAAGAAAGGGAGACAATAGAGCGATCAGAAAGGAAGGAAGA
AAGAACGAAAGGAAGAAATTAATCAATCAACCAAGCAAGCAAAGAGAGAG
AGCTGACAGACGAGGGCGGGGACATACGGCAAGAGGCTGGGGGGGGAGAG
GGGGGGGGGGGGGGGGGCTAAGGACAAGCGAGGGAAGAGTGAGGCAGCGG
AAAATCAGCCTGAGGTGAAGATTGAGAGATATGACGTGGACGCTGCCCAA
ACTTTGATGATTTGTTGCTACTTTGCGCATGCATTGCGTCTTGCTGCATC
AGCGTTGTTACTTGGTTTTCATACCACATCCACTGCCACCCTGCACCCAC
CCCCCGCCCTCACTCTGTGCCTAACGCGGCCAGGCTGAACGGAGTGATGG
TGGCGTACGAGAGGAGCAATGCGCTCAAAACCGCTGTGAAGCATCCACCC
ACAAACAAGATGCACGCGGTTAAATGTTTGACGCTATCATTCTTCTATCG
CCTACCTTTCTTCTTCTTTTTCTTCTTCTTCCTCATCTCTCGTTCTCCGC
CCCGCGTCCTCCAACTCACGCAGCATTCACAGCAACATGCATGACAATAG
CAAGGTACTTACCCCTATACTTGGTATGTACGCACACACACATACACGCA
CACATGTTTCGCACGAAAAACCAACGCTGCAGGTGGTTGCTTCTCGCGGG
AGAGACGGAAGGAGTTTTCGGCGCGGACGGCACTTGCGTCTCTAAGATAA
CGCCCGAGAGCCTTCCATCCGTCGAGGAATCTCTAGGGGGCTCCAGGGGC
ACCGACGTGACGGGCGGCATGGCCTCCAAGGTGCAGCAGCACCAGTACCG
CTGACGCCAAATTTCAATAGACGCCGCGCGGTGCGGTTGCGCTTCCATTT
AAAGCTCGACGTCAATCGCGTAGAGTTTGTTGGTGCTGCCCCACTGGCCG
CCCCGCGTCGTCTGTTGTGTTGGGAGACCTCCTTGGCGTCACGAAGCGCG
AAACACCCACTCTTGTAAAACGAAATGCCCGGTCGGCGAGCAGAAAACGA
AGCACGTGATCGACCGAGCCTTTTTTCTCGTGTATTCAAGCGGGGTGCGT
AGGGCACGCCAACTGCGACACTTACAGTTGCTCTTTCATGAAATTGCTGC
CGAGGCCAAACGGGAAATTCGCAGCTACGAAACGAAAGCTGTGACGACGA
GCCTCGCGACGACCGCTGCGACTTCTTTTTACGAAATTAAGCCCTTTTAA
GCCCTTTTGTTTTCCTTTTCGCGACACGCTGAACGTATAATTGCCCCTTT
TCTCTCGTACCCTCCTCTTGCCCCCCCCCGAGTATCCCCACCCTCACCCC
CCCGCCACCTCGCCCGCTCGCCCGCTCCCCCCGCGAGCACGCAGGTCCGA
GGGATGTTGTCTCTCGTTGAAAGCCTGCCAGGAACAAGAGTTAGAATATT
TTCCGGCCTCGAACCAGGCGACGTCAAGCTCGCATTGCTGCTAGCAGCGG
ACGGGAGGGACGGTGTAGAACTGACGCCAGACAGAACAAGCCGCGGGGTC
AGTAGCGGTGGTAATGGAGGCAGAAGCATCAGCCGTGATGGTGCACGGCG
AGGGGGGCCCGGTACCATTATTGCGGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCACCGGCGGTGGTTGTGTCCGTTGGCGGCGAAACGGTTGGGGGAGTT
GAAAATAACTAGTCGGAGACCGAAATATTATTTGGTACAGTCGTTGGCTG
GCCCAGCGTTTTTCAAAATGAGTTATATTAGGTATGATATTGCCATATAT
CTCAATCCACGAGCTACTGCAGCTAGAAGATCTTCCGATTTCCTTCGGGT
GGTCGACTCGGCTCTCGATGTTTGTTGCCCGGCGATCTATACCAGCTCCC
CATCACGCTTTGGGAATATCGGTATTGTCGCCTCCCTCTTCGCTGCCGCT
ATACCGAACTTGCTGAACGACGAGGTAACGATTGCAAATGCATACAGCCG
CAAAACAGAAATAAGTGAATCGCCCCCGTTCTCACGACCGGTACCTCTGA
AAGCTACCGTATTGTTTATGACAGCAGTCAGGGGGCGACACGTCGAAAAC
ATTGGGGAGCGTTTGTTTGAGCGGGTGGTATGTTTTGACATGACTAACTC
CACGTCAGGCGTGCTCTCTGGCGATCCCCCACGGGAGGAAGAATAAGTGA
AACTGCGTCTGGTACAAGTGCTGCCAAAATGCTGTTGATGACGATGCAAC
GGACGGGGGGTTGTGTTGGCGACGGCGGAGCGGGTGGGAACCAAGATAAG
GACGACAAATATTGCTGTTGGTCGTACCTCGCGGGTATAATGTCGAGTAA
ATCATCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:451657..458163-

>mRNA_P-littoralis_Contig8.100.1 ID=mRNA_P-littoralis_Contig8.100.1|Name=mRNA_P-littoralis_Contig8.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1386bp|location=Sequence derived from alignment at P-littoralis_Contig8:451657..458163- (Pylaiella littoralis U1_48)
ATGGAAGAGGATAGATCGCGGTTGGTGCTTTTGAAGCTCGGCGGAAGCCT
AATCTCGGATAAAACAAGGCCAGAAGCTCTACGGGGAGAGGTTCTGGACC
GAATTGCCAGGGAGTTACGAGAGGCCATCTCTGAGTGGGGTGACACAACA
AGGGTTGTCGTGGGCCACGGGAGCGGTTCGTTCGGACATGTCGCCGCCGC
CAGGCATGGCACCATAGACGGCGTATCAGGGGATGCTCAGTGGATGGGGT
TCTGCGAAGTGAGCGATTCGGCGGCTCGCCTCAATAGGTTGGTGACCGCG
GCGCTGCTCAGGGCGGGGATTCCGGCGATAAGCCTGCAACCGGCGGCATC
AGCGGTTTGTCGGGGGGGCAAGCTTATTTCTCTTGCGACGGCGCCGATCA
AGGCGGCGTTGGAGGCGGGTATCGTTCCTGTGGTGCACGGCGATGTTGCT
TTCGATGAGGAGCTGGGGGGCACCGTGGCATCTACGGAGGAGATTTTCGC
TTTTCTGGTGGGGGAAATGTCACCACGGTGGTTGCTTCTCGCGGGAGAGA
CGGAAGGAGTTTTCGGCGCGGACGGCACTTGCGTCTCTAAGATAACGCCC
GAGAGCCTTCCATCCGTCGAGGAATCTCTAGGGGGCTCCAGGGGCACCGA
CGTGACGGGCGGCATGGCCTCCAAGGTCCGAGGGATGTTGTCTCTCGTTG
AAAGCCTGCCAGGAACAAGAGTTAGAATATTTTCCGGCCTCGAACCAGGC
GACGTCAAGCTCGCATTGCTGCTAGCAGCGGACGGGAGGGACGGTGTAGA
ACTGACGCCAGACAGAACAAGCCGCGGGGTCAGTAGCGGTGGTAATGGAG
GGTGGTTGTGTCCGTTGGCGGCGAAACGGTTGGGGGAGTTGAAAATAACT
AGTCGGAGACCGAAATATTATTTGGTACAGTCGTTGGCTGGCCCAGCGTT
TTTCAAAATGAGTTATATTAGGTATGATATTGCCATATATCTCAATCCAC
GAGCTACTGCAGCTAGAAGATCTTCCGATTTCCTTCGGGTGGTCGACTCG
GCTCTCGATGTTTGTTGCCCGGCGATCTATACCAGCTCCCCATCACGCTT
TGGGAATATCGGTATTGTCGCCTCCCTCTTCGCTGCCGCTATACCGAACT
TGCTGAACGACGAGGTAACGATTGCAAATGCATACAGCCGCAAAACAGAA
ATAAGTGAATCGCCCCCGTTCTCACGACCGGTACCTCTGAAAGCTACCGT
ATTGTTTATGACAGCAGTCAGGGGGCGACACGTCGAAAACATTGGGGAGC
GTTTGTTTGAGCGGGTGGTATGTTTTGACATGACTAACTCCACGTCAGGC
GTGCTCTCTGGCGATCCCCCACGGGAGGAAGAATAA
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