mRNA_P-littoralis_Contig796.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 285 bits (728), Expect = 1.150e-87 Identity = 139/210 (66.19%), Postives = 170/210 (80.95%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTP 630
+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R + ++ AVL P YIS P A PV +GSA + P
Sbjct: 566 EAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVADGSAVESGAP 775
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.000e-65 Identity = 119/192 (61.98%), Postives = 138/192 (71.88%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 582
GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH NPTA QAKERAA+ DL RSLHG SRANH AR+G+D+IASG R RIMLP S R ++ A L RY+S D P
Sbjct: 55 GYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP------SDRRRAVCYD--AGALEERYLSCDVP 233
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.500e-47 Identity = 85/120 (70.83%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 310 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 669
MR GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+F RY+S +PRA P VEG ASQESTPASAGQT V N Y
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSY 120
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 174 bits (440), Expect = 9.220e-47 Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 283 DVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 669
D+ E+R+GHM GLGSH NPT +AKERA RGDL RSLHG SRA HN+NAR+G+D+IASG R RI+LP+T+ ERSATMR S N +AV+FPRYIS D+P A PVV GSASQEST A AGQT V NPY
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVVGGSASQESTAAPAGQTPVVFNPY 658
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 164 bits (414), Expect = 4.590e-46 Identity = 93/196 (47.45%), Postives = 130/196 (66.33%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRN--ARRGQDYIASG--YRARIMLPITEGERSATMRPSSWNTPAAVLFPRYI 567
G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRNPTA +AK+R+A GDL R+ +G+ R N +RN AR G D+ G + I+L +T+ E +R NTPA VL PRY+
Sbjct: 83 GCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYM 278
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 157 bits (397), Expect = 5.130e-45 Identity = 97/196 (49.49%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFE----KWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 582
GYI SADDSKLEELMDILRFF+ +WR + T G T S R S G D+VE+R+ HMR LGS+ NPTA QAKERAARGDL RSLHG SRANHN+N R+G+++IASG R RIMLP+T+ ERSATMR S N+ +AV+FPRYIS +P
Sbjct: 3 GYIRSADDSKLEELMDILRFFDDGGPRWRLDRRWATAPGRRT---------SSPTTRGSTSG---------------------------------PDIVEHRYAHMRQSLGSNSNPTAAQAKERAARGDLYRSLHGVSRANHNKNERKGEEFIASGIRGRIMLPVTDAERSATMRAPSRNSVSAVMFPRYISIHKP 156
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 4.110e-38 Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 1
Query: 280 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 582
+D VE+RFGH R GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +P
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKP 166
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 129 bits (324), Expect = 6.980e-35 Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 310 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 582
MR LGSH NP A QAKER ARGDL RSLHG SRANHN+NAR+G+D+IASG R RIMLP+T+ ERSATMR S N +AV+FPRYIS D+P
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISIDKP 91
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5KZP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP5_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.440e-34 Identity = 80/147 (54.42%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 232 SRLRDTP-RYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 669
SR R TP R PR V + G+ +G GS R DLNR LHG SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +PRA P VEGSASQESTPASAGQ V NPY
Sbjct: 56 SRSRGTPVRAHAPR---PSVAQKPDGYESEGTGSTR--------------DLNRGLHGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKPRADPTVEGSASQESTPASAGQIPVVFNPY 185
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.900e-33 Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDY-IASGYRARIMLPITEGERSATMR 519
+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ L R++ PR QD++E+RF H+R G G+H+NPTA QA E A GD R HG R N +R+A G + + R P ER+ +R
Sbjct: 490 RKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVR 653 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig796.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig796.42.1 >prot_P-littoralis_Contig796.42.1 ID=prot_P-littoralis_Contig796.42.1|Name=mRNA_P-littoralis_Contig796.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=210bp MDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRback to top mRNA from alignment at P-littoralis_Contig796:123761..124641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig796.42.1 ID=mRNA_P-littoralis_Contig796.42.1|Name=mRNA_P-littoralis_Contig796.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=881bp|location=Sequence derived from alignment at P-littoralis_Contig796:123761..124641- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig796:123761..124641- >mRNA_P-littoralis_Contig796.42.1 ID=mRNA_P-littoralis_Contig796.42.1|Name=mRNA_P-littoralis_Contig796.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=630bp|location=Sequence derived from alignment at P-littoralis_Contig796:123761..124641- (Pylaiella littoralis U1_48)back to top |