mRNA_P-littoralis_Contig789.9.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 494 bits (1273), Expect = 2.810e-173 Identity = 232/268 (86.57%), Postives = 244/268 (91.04%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
R+ HPVEHKV+ACLTIL RGN FGSIY LSWMS+ VQK FH+FC+HFATEMYDEHIFLP++ENGELDRVMGQYEKLGFPGAMGSTDVTHI W RCPYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK+RFRILKLAMTYQ+QER+DYVFFTCCILHNMLHT DGM LEE
Sbjct: 119 RRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEE 386
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 459 bits (1182), Expect = 2.010e-160 Identity = 210/268 (78.36%), Postives = 232/268 (86.57%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS D+LFSKRLESVRKDVECFFGILK FRI K+AM Y EQERID VFFTCCILHNMLHTFDGMD L E
Sbjct: 90 RQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVE 357
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 440 bits (1131), Expect = 5.940e-152 Identity = 213/293 (72.70%), Postives = 231/293 (78.84%), Query Frame = 1
Query: 10 HPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
HPVEHKV+A LTIL RGNCF SIY +SWMS+ VQ FHKFC+HFA EMYDE I LPT+E+G+LD VM QY++LGF GA+GS DVTHIAW RCPYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I DK YT EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTC ILHNMLHTFDGMD L E
Sbjct: 80 HPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVE 372
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 394 bits (1013), Expect = 1.170e-135 Identity = 189/260 (72.69%), Postives = 210/260 (80.77%), Query Frame = 1
Query: 25 KVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
+V+A LTIL +GNCF SI+ +SWMS+ VQ FHKFC+ FA EMYDEHI LP +E+G+L VM QY++LG CPYNQARSYTGK+ PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILHNMLHTFDGMD L E
Sbjct: 20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVE 262
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 385 bits (988), Expect = 2.030e-132 Identity = 179/217 (82.49%), Postives = 195/217 (89.86%), Query Frame = 1
Query: 154 MYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
MYDEHI LPT+E+G+LD V+ QY++LGF GAMGS DVTHIAW RCPYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QERID VFFTCCILHNMLHTFDGMD L E
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVE 217
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 379 bits (973), Expect = 3.710e-127 Identity = 179/268 (66.79%), Postives = 215/268 (80.22%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
RQ PVE KV+ACL IL+RGN F IY +S++S V TFH+FCK+FA E+YDE+++LPT E +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI PSK P+ GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD D+ E
Sbjct: 166 RQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 431
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 378 bits (970), Expect = 6.580e-127 Identity = 181/268 (67.54%), Postives = 212/268 (79.10%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
R+G PV+ KV+ACL ILARGNCF IY +S++S TFH+F ++FA EMY EHIFLPT + + +VM QY++LGF GA GSTDVTHI WG CPYNQARSYTGKEG PT+ YQVTV+H RVLAVT GFTGSTNDK+II +D AV +IR+D Y+EK F VY DGT LKGCYL+VDNGYHKW TLI PSKYP+ DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y +QE ID VFFTCCILHNMLH++D ++EE
Sbjct: 150 RRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEE 415
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 371 bits (952), Expect = 3.010e-125 Identity = 174/264 (65.91%), Postives = 211/264 (79.92%), Query Frame = 1
Query: 13 PVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
P +V+ACL IL+RGN F IY +S++S V TFH+FCK+FA E+YDE+++LPT E +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI PSK P+ GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD D+ E
Sbjct: 79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 340
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 337 bits (865), Expect = 4.620e-112 Identity = 152/198 (76.77%), Postives = 170/198 (85.86%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYP 594
RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+A VQ FH FCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN RSYTGKEG PTIGYQVTVNHAGR AVTEGFTGSTNDKTI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+ + P
Sbjct: 117 RQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 334 bits (856), Expect = 5.610e-110 Identity = 169/268 (63.06%), Postives = 188/268 (70.15%), Query Frame = 1
Query: 1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
R HPVEHKV+A LTIL R NCF SI+ +SWMS+ VQ FHKFC+HFA +MYDEHI L +E+G+LD V+ G CPYNQARSYTGKEG PTI YQV TI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEPSKYPLS DLLFSKRL+SVR+D GILK RFRILKLAM YQ QERID VFFTCCI+HNMLHTFDGMD L E
Sbjct: 164 RASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVE 393 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig789.9.1 >prot_P-littoralis_Contig789.9.1 ID=prot_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp MACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPback to top mRNA from alignment at P-littoralis_Contig789:11630..14635- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig789.9.1 ID=mRNA_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3006bp|location=Sequence derived from alignment at P-littoralis_Contig789:11630..14635- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig789:11630..14635- >mRNA_P-littoralis_Contig789.9.1 ID=mRNA_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig789:11630..14635- (Pylaiella littoralis U1_48)back to top |