mRNA_P-littoralis_Contig78.96.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A6H5KKY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY4_9PHAE) HSP 1 Score: 728 bits (1879), Expect = 1.500e-250 Identity = 415/515 (80.58%), Postives = 432/515 (83.88%), Query Frame = 1
Query: 391 DYPLGGSRDEIPDGGVGGEGFGLITSMPPPLGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGRRAARAAPRKPPASSSSSPLASVDDGDDFPPRAPNDFAGSGSXXXXXXXXXXXXXXXXXXXNDMESARSGRKVAVRGTTGVNRGVEVNGGSFNIVKQLMFKTSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRYGRNHQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHTGGNLVNNWAATIIGRDVRKHGDMKLRSDRHSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQPTSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSDPMQSVLVNSVARVVHTAWHPGQDARALMSLSAASGQSGKNFALHLHGGLR 1935
DYPLG +R +P GGVGGEGFGLITSMPP XXXXXXXXXXXXXXXXXXXXX RKPPAS VD D+FP R P+D AG+ XXX XXXXXXXXXXXX R+ TTGV+RGVEV SFNIVKQLMF+TSRS KPR MAFNP+ PGLFAVCS+DLSVDLWRYGRN QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGH+G LVNNWAATII +D R DMKLRSDRH+KPA AVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDA+SDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQPTSLIH ARRMEWKRKD+KKSFS VYPSISPCGRYVACAGDWNGCFH+WDVRSARS+PMQSVLVNSVARVVHTAWHP QDARALMSLSAASGQ GKNFALHLHGGLR
Sbjct: 482 DYPLGSTRVGLP-GGVGGEGFGLITSMPP-------------AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKPPAS--------VDAADEFPARVPSDGAGAXXXXXALDSXXXXXXXXXXXXXXXXXXXXSRE-----TTGVHRGVEVKRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRSKSDMKLRSDRHNKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQPTSLIHTARRMEWKRKDDKKSFSGLVYPSISPCGRYVACAGDWNGCFHIWDVRSARSEPMQSVLVNSVARVVHTAWHPDQDARALMSLSAASGQGGKNFALHLHGGLR 969
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: D8LT10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT10_ECTSI) HSP 1 Score: 350 bits (898), Expect = 5.820e-108 Identity = 232/318 (72.96%), Postives = 248/318 (77.99%), Query Frame = 1
Query: 388 EDYPLGGSRDEIPDGGVGGEGFGLITSMPPPLGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGRRAARAAPRKPPASSSSSPLASVDDGDDFPPRAPNDFAGSGSXXXXXXXXXXXXXXXXXXXNDMESARSGRKVAVRGTTGVNRGVEVNGGSFNIVKQLMFKTSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRYGRNHQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHTGGNLVNNWAATIIGRDVRKHGDMKLRSDRHSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVA 1341
+DYPLG +R +P GGVGGEGFGLITSMPP GGSXXXXXXXXXXXXXXXXXXXXXXXXXXX RKPPAS VD D+FP R P+D AG+G+ XXXXXXXXXXX R+ TTGV+RGVEVN SFNIVKQLMF+TSRS KPR MAFNP+ PGLFAVCS+DLSVDLWRYGRN QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGH+G LVNNWAATII +D R+ DMKLRSDRH KPA AVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDA+SDLHKVA
Sbjct: 324 KDYPLGSTRVGLP-GGVGGEGFGLITSMPPAGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------RKPPAS--------VDAADEFPARVPSDGAGAGAGEGALDSGXXXXXXXXXXXXXXXXXXXSRE-----TTGVHRGVEVNRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRRKSDMKLRSDRHHKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA 612
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A8K1C7B6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7B6_PYTOL) HSP 1 Score: 138 bits (348), Expect = 4.800e-31 Identity = 111/353 (31.44%), Postives = 166/353 (47.03%), Query Frame = 1
Query: 907 SHKPRAMAFNPMVPGLFAVCSSDLSVDLWRYGRNHQELEKV------SERNDVTPVGGAHMAWNPSGTHLAIGHTGG---------------NLVNNWAATIIGRDVRKHGDMKLRSDRHSKPAPAVAWVTPSKNNQD----HLVTGGEDGHVVIWTR--VLDAKSDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSY---SIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQP-TSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSD-----PMQSVLVNSVARVVHTAWHPGQDA 1857
+ K R +AFNP+ +FA S D + LW+Y RN+ E+ KV S R + +AW+P G LAI +L N+ ++ RD K L H++ A+ W+ PS + LVT G D +V+W L +++D K +LH H S VRS C S ++ TGG DG ++ Y S T +V +SK +N +LE P NP+ LL+S+V+ ++ H+L D R+ + + W R + KS S ++ P SP G +V+C G +G +VWDVR P QS+ V+ +V+H WHP DA
Sbjct: 173 ARKIRHLAFNPIQQDVFATSSDDGGLILWKYTRNNHEVSKVVSFAPTSFRKEAQCP--ESIAWSPGGDRLAIAFRDPVDSLSEFCVARLHELSLTNSSEPLVLPRDRLKAKSTTL----HTRGISAIEWI-PSGYGEGVSSRGLVTAGSDHGLVMWEEHEALKSQTDF-KWRVLHREHRSDVRSICMHSQRNSIYTGGLDGLVIRYDMNSFRTHTVMERRRPHISK-----INAVLENPHNPNLLLISSVEQSE-HNLLLHDLRERYDEKRQSTMTLSWVRSSDSKSMSQYIVPRWSPGGFHVSC-GSTSGLVNVWDVRVRGPKFPYVLPQQSINVHQ-KQVLHATWHPRYDA 509
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A6S7N4D1_LACSI (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A6S7N4D1_LACSI) HSP 1 Score: 76.3 bits (186), Expect = 9.640e-11 Identity = 88/355 (24.79%), Postives = 148/355 (41.69%), Query Frame = 1
Query: 898 TSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRYGRNHQELEKVSERNDVTPVGGAHM---------AWNPSGTHLAIGHT--GGNLVNNWAATIIGRDVRKHGDMKLRSDR-HSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNP---HSLLVSTVDTAKSHSLFTMDTRQPTSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSDPMQSVLVNSVARVVHTAWHPGQDARALMSLSAASGQSGKNFALH 1917
+ K R++ P LF + D V++W Q ++ S N V+ + A M AW+P+G+ L ++ GG+ + A + + + +++ D+ H K P NN +TGG D VV WT+ + + + S H+SAV TVV+ GAD R++ + + T ++ H + ++ + NP + +V T K LF D R + IH WK+ + S S+ + + SP G Y+ +G + H++D+R + P QS+ + RV AWH L+S+S S N LH
Sbjct: 246 SQHKRKLRSLVLCPTNDQLFVTSALDGIVNMW------QIQDRGSHANLVSSINCASMKQRRWPEDVAWHPNGSSLISVYSADGGD---SQIAILNLNEREEESEVRFLEDKGHVKGIINNVMFMPWDNNC--FITGGSDHGVVHWTKKHNDNNSWKPKLLHRSIHSSAVMGVAGMKQKQTVVSVGADKRIIGFDLHTEKPDYK---------HQIESKCMSVVPNPCDFNLFMVQTGTPQKQLRLF--DIRLKNTEIH---EFGWKQ-ESSMSQSALISQTWSPDGLYIT-SGSVDPMIHIFDIRFNANQPSQSIKAHQ-KRVFKAAWH--HSLPLLISIS-----SDLNIGLH 565
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A6P6X1T8_COFAR (uncharacterized protein LOC113738625 isoform X1 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6X1T8_COFAR) HSP 1 Score: 68.6 bits (166), Expect = 2.640e-8 Identity = 87/350 (24.86%), Postives = 139/350 (39.71%), Query Frame = 1
Query: 889 MFKTSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRY---GRNHQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHTGGNLVNNWAATIIGRDVRKHGDMK--LRSDRHSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAILH-SRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAK-SHSLFTMDTRQPTSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSDPMQSVLVNSVARVVHTAWHPGQDARALMSLSAASGQSGKNFALH 1917
+ + K R++ P LFA + D ++LW+ G + L + +AW+P G L ++ N + +I+ + K G L H K P K+ + VTGG D V +W+ HKV LH S H+SAV TV++ GAD R+V + + + ++ H + ++ + NP + V T L D R + +HA WK+ + S S+ + + SP G Y++ +G + HV+D+R P QS+ + RV WH AL L + S S N LH
Sbjct: 279 VISSQHKRKLRSLILCPTNDQLFATSALDGIINLWQVQGKGSSANLLSTTDCSSAKQRRWPEDIAWHPQGDSLFSVYSADN--GDSQISILNLNKTKEGTRVSFLEQKPHLKGIINSITFMPWKDTR--FVTGGSDHAVFLWSEKDGENPWKHKV--LHRSMHSSAVMGVAGLQQKTTVLSVGADKRIVGFDVASERAGYK---------HQIESKCMSVVPNPCDFNLFMVQTGTPERQLRLFDIRLRNTELHA---FGWKQ-ESSDSQSALINQAWSPDGLYIS-SGSADPVIHVFDIRFNSRRPSQSIKAHQ-KRVFKAVWH-----HALPLLISIS--SDLNIGLH 600
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: I1GKT4_BRADI (Uncharacterized protein n=3 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GKT4_BRADI) HSP 1 Score: 67.0 bits (162), Expect = 7.260e-8 Identity = 81/348 (23.28%), Postives = 142/348 (40.80%), Query Frame = 1
Query: 889 MFKTSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRYGRNHQELEKVSERNDVTPVGG--AHMAWNPSGTHLAIGHT---GGNLVNNWAATIIGRDVRKHGDMKLRSDRHSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQPTSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSDPMQSVLVNSVARVVHTAWHPGQDARALMSLSAASGQSGKNFALH 1917
+ + K R + P L + D V LW+ + +S N +P +AW+P G + ++ G + V+ I G+ K + + W +T G D V++W D+ S HK + H+SAV T+++ GAD R++S+ + +++ L+ SK ++N P + + +V T + LF + RQ +HA + WK+ + +S S+ + + SP G Y++ +G + H++D+R +P QSV + RV WH Q L S+S S N A+H
Sbjct: 220 LVSSQHKRKLRCLELCPANDQLVVTSALDGIVTLWQVQSKGPSISLLSTTNCFSPKQRWPEDVAWHPDGDTIFAVYSADGGDSQVSMMNLNISGQKKVTFLPAKPHTKGIINNINFMPWSDAG------FMTAGSDHSVILWQEKDDSWS--HK-KVHKELHSSAVMGVAGLQQRKTIISVGADKRIISFDLSAERAEYKNLID-SKCMSVLLN-----PCDFNLYMVQTASPGRQLRLFDIRLRQTE--VHA---LGWKQ-ESSESQSALINQAWSPNGWYLS-SGSADPVIHIFDIRYQGENPCQSVQAHQ-KRVFKAVWH--QTFPVLTSIS-----SDLNVAIH 537
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A1S8W411_9FUNG (Uncharacterized protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W411_9FUNG) HSP 1 Score: 66.6 bits (161), Expect = 1.280e-7 Identity = 89/376 (23.67%), Postives = 159/376 (42.29%), Query Frame = 1
Query: 868 FNIVKQLMFKTSRSHKPRAMAFNPMVPGLFA--VCSSDLSVDL-WRYGRNHQELEKVSE---RNDVTPVGGAHMAW-NPSGTHLAIG-------HTGG---NLVNNWAATIIGRDVRKHGDMKLRSDR-----HSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKV-----AILHSRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAKSHSLFTMDTRQPTSLIHAARRMEWKR-----------KDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSAR-SDPMQSVLVNSVARVVHTAWHPGQDARALMSLS 1878
+ I+ Q + K R KPR + P G + +S LS L W + + L V E RN T M W P+ +A G H G + + I R + + G + R + H + A++ +TP N++ +T D + +W+ S H LH HTS + S S V +GGAD RLV +S+E+ E L ++ + + +++ P+ P+ LLV +D KS + +D R +++ + + + + EK S + +++ S+ P G V+ + ++WD+R + P Q+ ++S RV++ + G +L+S+S
Sbjct: 458 YGIIPQTLGKFER--KPRTLLLPPDTSGALSEIAVTSSLSGSLQWWNLKTRRTLNIVDEGIMRNGWTE----DMCWIGPNILAIAAGPPPQSSRHDGRVQHQVALMYNCHITKRSMYELGTLDFRLEHLKEMPHDRNISAISPMTPI-NSKTRWLTASSDKRLFLWSFENQFHSKHHHYNPISHRCLHEIHTSTIHSVYHNPFSEIVYSGGADSRLVGWSLESG----ENTLSSTRQF-AAIRDVIGIPNQPNMLLVGFMD--KSSHMKALDLRTNEYVLNLSIPDDVGKTLNVQVDAMGNEREKLSQTKYMHASVHPSGYTVSLGHSSSSDLNIWDLRYVEVNSPTQTFNLHS-NRVLYAKFFEGFGRSSLVSIS 818
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Match: A0A2U1QJ53_ARTAN (Transducin family protein / WD-40 repeat family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QJ53_ARTAN) HSP 1 Score: 65.9 bits (159), Expect = 1.710e-7 Identity = 85/349 (24.36%), Postives = 139/349 (39.83%), Query Frame = 1
Query: 898 TSRSHKPRAMAFNPMVPGLFAVCSSDLSVDLWRY-GRN----HQE-LEKVSERNDVTPVGGAHMAWNPSGTHLAIGHTGGNLVNNWAATIIGRDVRKHGDMK-LRSDRHSKPAPAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAKSDLHKVAILH-SRHTSAVRSACCPSISPTVVTGGADGRLVSYSIETASVQWEELLRVSKTYHPMVNELLEFPDNPHSLLVSTVDTAK-SHSLFTMDTRQPTSLIHAARRMEWKRKDEKKSFSSFVYPSISPCGRYVACAGDWNGCFHVWDVRSARSDPMQSVLVNSVARVVHTAWHPGQDARALMSLSAASGQSGKNFALH 1917
+ K R + P LF + D V+LW+ G+ HQ + S + P +AW+P+G+ + ++ + + I D+ K + L H K P N +TGG D VV W+ + K +LH + HTSAV + TV++ GAD +++ + +ET + H + ++ + NP + + T L D R IH WK+ + S SS + + S G Y+ +G + H++D+R + P QS+ + RV AWH Q L+S+S S N LH
Sbjct: 238 SQHKRKLRTLVLCPTNDELFVTSALDGIVNLWKIQGKGSHVIHQSSINAASLKQRRWPE---DVAWHPNGSSMIFVYS----ADGGDSQIAVMDMNKGQKVTFLEHKPHVKGTINNVMFMPWDRNS--FITGGNDHAVVHWSE--KPGENCWKPNVLHKTNHTSAVMGVAGIKHTKTVISVGADRKIIGFDLETERTDIK---------HQIDSKCMSVLPNPRDSNLFMIQTGTPERQLRLYDMRLKGDEIHG---FGWKQ-ESSASQSSLINQAWSSDGLYLT-SGSADPMIHIFDIRLNANQPSQSIKAHQ-KRVFKAAWH--QSLPLLISIS-----SDLNIGLH 553 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.96.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig78.96.2 >prot_P-littoralis_Contig78.96.2 ID=prot_P-littoralis_Contig78.96.2|Name=mRNA_P-littoralis_Contig78.96.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=647bp MEQDEIAIQIDAAKRLLNLYDSSSSTTPDVAIIPSPPPAAATKNSASSLTback to top mRNA from alignment at P-littoralis_Contig78:399203..407614+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig78.96.2 ID=mRNA_P-littoralis_Contig78.96.2|Name=mRNA_P-littoralis_Contig78.96.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8412bp|location=Sequence derived from alignment at P-littoralis_Contig78:399203..407614+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig78:399203..407614+ >mRNA_P-littoralis_Contig78.96.2 ID=mRNA_P-littoralis_Contig78.96.2|Name=mRNA_P-littoralis_Contig78.96.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1941bp|location=Sequence derived from alignment at P-littoralis_Contig78:399203..407614+ (Pylaiella littoralis U1_48)back to top |