mRNA_P-littoralis_Contig78.2.98 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: D8LQC0_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC0_ECTSI) HSP 1 Score: 2414 bits (6255), Expect = 0.000e+0 Identity = 1257/1431 (87.84%), Postives = 1290/1431 (90.15%), Query Frame = 1
Query: 286 ESAAKAVLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAYMHTEAQEQQPDDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQANGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNNCKRALTWKWRGDMTPASRTEYQSVKMQLTYENVDGKPFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSA--RFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNCLEDKGPAGS-AMGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQ 4569
ESA KA LRE+GDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQD IQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSV+DLMEVK+ALMPT+QANKTRAEAQDAYMH EA+EQQP DFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQG+LIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGD+FDWPFVDERAK GYGLDME EIGVGLQANGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHL+ESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNK MCASCDFNQ+SNNCKR+LTWKWRGDMTPASRTEYQSVKMQLTYENVDGKPFVELDE DQATNVRARLKNYAHKVYKKTK+TKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKI+TKKAKKAK+KAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGA+LIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTF TKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQ GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVT+RAVPTAIFSAEPAVKKHYLRKWLKDP MEDF IRS+LDW YYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKA P G QLTNAGAST + XXXXXXX AAGRSILGARARVTKRI + +A DGSPGKEN XXXXXXXXXXXXX VPI+REDDFQGWLAQQK GWK+ REQ +LKRRT+ARSQA+ +FRG+GS GARGGTA G+GAAGAAEKRRRTAAMG+SGLQGYLTSAQDALLRGFWQVVEIRPSD PG FTVFA+TGPG++QV+PITIPRVFYVNCLEDKGPAGS AMGRRVARTLPNG SPFL+EVAMDEAKFQRNEKQ
Sbjct: 64 ESAVKAALREQGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEAREQQPSDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAK---GYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLVESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKAMCASCDFNQDSNNCKRSLTWKWRGDMTPASRTEYQSVKMQLTYENVDGKPFVELDEADQATNVRARLKNYAHKVYKKTKITKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKILTKKAKKAKSKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGAMLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFTTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQ--------------------------------------------------------------GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTDRAVPTAIFSAEPAVKKHYLRKWLKDPAMEDFDIRSILDWDYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAAPPGTP--QLTNAGASTKAKPTPAPAATDIEDMAGXXXXXXX-----AAGRSILGARARVTKRIGNGAAAGGALAPDGSPGKENADVGXXXXXXXXXXXXX-----------AVPIRREDDFQGWLAQQKAGWKKRREQNRLKRRTEARSQAMASFRGSGSSGARGGTA-GLGAAGAAEKRRRTAAMGKSGLQGYLTSAQDALLRGFWQVVEIRPSDNPGSFTVFAMTGPGELQVIPITIPRVFYVNCLEDKGPAGSSAMGRRVARTLPNGHGSPFLYEVAMDEAKFQRNEKQ 1410
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA) HSP 1 Score: 2269 bits (5879), Expect = 0.000e+0 Identity = 1300/2525 (51.49%), Postives = 1635/2525 (64.75%), Query Frame = 1
Query: 289 SAAKAVLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTR------AEAQDAYMH---TEAQEQQPDDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQANGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNNCKRALTWKWRGDMTPASRTEYQSVKMQLTYENVD-GKPFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGK-ENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNC-LEDKGPAGSAMGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFARIFERFTNNSDSSCTFKASSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQG--SLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDS--------------------------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPP-ADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMDEDEEERWQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETVEHIL 7668
SA++ RE GD D RFGY R+ EG PRLGW+ +M +++PD G E+SG+D+YFL+QDG TFK T FY+PYFY+ ++++RYI + +Q ++R+F+ + + DKEDLD+PNHLSGKL RFL+LSF +VS+LMEV+ L+P V+ NK R +A++ M A + PDDF LVD REYDVPY VR +IDLD+RVGAWY VT + E V + W+K++++KAEP+VLA+DIECTKAPLKFP+ +DQ+FMISYMVDGQG+L+I+REVV ED+++FEYTPKP++ GPF + N P+EEAV+R F +HV ELRPQI VTYNGDYFDWPF++ R +A YG++M +EIGV ++ GEYRGR H+DA +WVKRDSYLPQG+ GLKAVTKYKLGYDPVEVDPEDMVR+A ER TEMA+YSVSDAVATYYLY TYVH F+FSL TIIPM +DVLRKGSGTLCE LLMVEA+RGNIVCPNK E +FH GHLLESETY+GGHVECLETGV+RSD+ KFRLVPSALQALIDNVDRDL FA+EVE + + V NY EV++EIIE+L LRD+PLR+E P IYHLDV AMYPNIIL+NRLQP +IV++ CA+CDFNQE N CKR + W WRGD PA+R++++ V++QL YE G+ + LD +Q +R RLK Y+HKVYKKTKVT +EER DTVCMRENPFYVNTVRAFRDRRY+YK++TKK K K KA DA+G K A D+ VFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVT TGA LI QAREL+EQIGRPLELDTDGIWCILP SFPENFT T +G KI +SYPCVMLNADVHE YTNHQYQDL DPAT +Y T SECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFN DGSLAELKGFELKRRGELE+IK FQ QVFE FL+G TL ECY AVG++AN WLDVL S+G ++DD+E++ LIS+NKT+S+TL+ YG KG S TTA RLADFLG +MVKDKGLNCR++++NRPHGAPVTERA+PTAIFS P V+KH+LRKWLKD M DF IRSL+DW YY +RLG I+KIITIPAAMQKV NP PRV HPDWL K +RE+ DGYRQ KI LF A NA T A R R +++ +G + + GK D A P ED FQGWLA +K W+ R +R+L+ R R AV R R G G G + R + +L A A+ +G WQV+EIR S+ PG F V+A+TG MQ + + + R Y+ ++D+ GRRV R LP+G SP+ +EV MDE +F NE + +L AG+ GVYEL TPL +RAI +G +A+V G KSG+ F LEDLE ++ A+ PYLHPS A F+++Y+Y S S +R +V LF + G N D+E E + A A VW+ NPFS E RPP R F R+ + CTF ++ V + + A A +A+L+ YI++R+GPT+VLSQ ++ LRR +PAL++LPV +P NA+D R+PAL WQ+++ QRM+QRF P WL DRL ARY+HLPL N+G D MAD GRLL NRH LWASE +RPDLGG E D ND WA++ ++P I PGAYR +CIELEI GLAV S++++ +LE ++G+QG+ V N +A ASAFR+L+VLV TW+ EV +G++ AD+L +F+RW+C SL ++ AL RL F RL+AE+RRLGA V+FA+ Q+++IATNK D+ +A +YA FV+ TV SR +F+ LQ+ P ++W QL F D+ N+GG+ + + AA + XXXXXXXXXXXXXXXXXXXXXXXXXXXX XX D XXXXXXXXXXXXXXXXXXXXX + VQG A G + A L G +GA D + + SHW++ YLPA++R F +V+T L + R + + +A+L N+L +SQ G A ++KEE N +SM FL+ +V LT +L TV I GP+ FP G RQ T PALEF+K +C +L LD V ++V LR+Q LA++G ++FS +GL D C SFV+PD+IC+FC+ CRDLDLCRD +L+ ED + W+C C + YD +E L+ AV+R+ RY LQD+RC C V+T +MS C CSGRLV +E +F + LR++AL +S L+E V+ L
Sbjct: 50 SASRYRAREAGDEFDIRFGYSRFEEGSPRLGWLLDMNASTVPDEEGRERSGMDLYFLQQDGDTFKVTTFYEPYFYIGLRDDRYIAEVVQLLQRKFDQVGMTILACDKEDLDLPNHLSGKLHRFLRLSFFNVSELMEVRSVLLPLVERNKQRMAVGLAGDAREGGMEGLGPGAGARPPDDFFETLVDIREYDVPYVVRVAIDLDLRVGAWYTVTARGEHVALKWEKDIIEKAEPRVLAFDIECTKAPLKFPDANVDQIFMISYMVDGQGYLLINREVVGEDIQDFEYTPKPAYAGPFTVVNVPDEEAVLREFIRHVQELRPQIFVTYNGDYFDWPFMETRMEA---YGIEMSAEIGV-AESQGEYRGRAAVHLDAFHWVKRDSYLPQGAQGLKAVTKYKLGYDPVEVDPEDMVRFAHERATEMASYSVSDAVATYYLYTTYVHNFIFSLSTIIPMKAEDVLRKGSGTLCETLLMVEAFRGNIVCPNKQVEAPMRFHKGHLLESETYVGGHVECLETGVYRSDIDYKFRLVPSALQALIDNVDRDLRFAVEVEGHARVENVVNYAEVKAEIIERLAELRDTPLRDEPPLIYHLDVGAMYPNIILTNRLQPCSIVDQSDCAACDFNQEKNQCKRPMKWVWRGDHLPATRSDFEQVQVQLAYERTSTGEAYHALDRAEQTRKLRERLKLYSHKVYKKTKVTVQEEREDTVCMRENPFYVNTVRAFRDRRYEYKVLTKKWKSVKLKAEASDDALGRKAAEDKETVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTDTGARLITQARELMEQIGRPLELDTDGIWCILPVSFPENFTLLTAAGKKIPLSYPCVMLNADVHERYTNHQYQDLVDPATHRYATHSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNKDGSLAELKGFELKRRGELELIKAFQGQVFECFLKGSTLEECYNAVGDIANFWLDVLDSRGEELDDEEVVGLISENKTISKTLDQYGDQKGASLTTASRLADFLGPDMVKDKGLNCRLVIANRPHGAPVTERAIPTAIFSTAPGVRKHFLRKWLKDSAMSDFDIRSLIDWDYYKERLGKSIQKIITIPAAMQKVPNPVPRVLHPDWLDKKIRELTDGYRQLKISNLFAAEK---------NAKGGVGTPGKHALMDIEDTMGGLSRGKGSPLKPYTAVVR-------RAGRKLDEEGHDENDSTEANGKIGQDAAVEDVPRPIQEAKAVGESAGMPASRRRCPAIGED-FQGWLAFRKAQWREGRMERRLEAR--GRRGAVGNRR------PRHGEGVEPGTQGVTK---------RQNVASFLKGAALAVTQGCWQVIEIRESELPGEFVVWAMTGQKSMQRLHLKVHRTMYITSNMDDEVGFQKIKGRRVTRFLPHGYRSPYTYEVTMDERRFLSNENNLARWLSTAGVTGVYELQTPLWFRAIAKVGCLAQVSSRYQGGAGGGKSGS---RAFRLEDLESLSTASMPYLHPSTAVFRNLYVYISQSARRALVALFVLGGDNRDLELESADAANS-------------VHSMRATAQVWLANPFSTAEA--RPPLKRFFARYAPPGVA-CTFSSTYVASLKSALAQLNAALTGYIQERHGPTVVLSQSVLDLSILRRSVPALNDLPVVSMPSNADDNRYPALSWQSYSTQRMIQRFLCMPGWLQDRLQAARYSHLPLGNLGLDPQRTMADVLLGRLLHGNRHVLWASEGTRPDLGGAEDDQNDAWADEASNPVIRVPGAYRKVCIELEIEGLAVLSMLSAVELEEMDGAQGLATSDVAQGNGGVAGPGGESAGAGGGDD-------------------RACASAFRLLRVLVETWMGEVERVGSLQADALATNFWRWMCDADSLFYDPALRRLCLMLINKYFHRLVAEMRRLGAQVIFANAQRIMIATNKEDMASAHEYASFVLRTVLSRRIFSRLQITPVRYWWQLFFFDEHNFGGLGYKDPEAAAAHRAALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRRKMXXXXXXXXXXXXXXXXDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVGSQSSTEGTGSALVQG----RAKSRLEEVGEEMGDDGAGSLRGEEGAEADVDEEDYDLQSHWDMLNYLPAALRHPFDYVVATMLADHLREERDRKEHRKERLAALGNRLLGTSQ------------------GQEAEAEEEVEMLQKEEENHERSMVRFLQKMVEGRLTRTLLRTVQDIDNEF-RGPECFPATVGVHRQSTTPALEFVKVVCGLLKLDSAVEEQVVVLRRQLLAQLGAKEFSEQGLSADYCRSFVVPDLICAFCSHCRDLDLCRDEQLLSEDPDRWWRCPHCANRYDVDRVEQLLITAVERQVTRYALQDLRCVNCRRVSTLSMSDVCKCSGRLVGDEKPSEFQDLMATLRRIALQYSLAGLKEAVDFAL 2475
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE) HSP 1 Score: 2185 bits (5661), Expect = 0.000e+0 Identity = 1302/1649 (78.96%), Postives = 1372/1649 (83.20%), Query Frame = 1
Query: 2950 MVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAK-----------------GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLK-------------DPGM--EDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRI---TSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNCLEDKGPAGSA-MGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFARIFERFT----------NNSDSSCTFKASSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPE-----AGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMDEDEEERWQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETVEHILVTDGYMDAAEETPQGEEE 7722
MVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLA+CY+AVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAK GTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVT+RAVPTAIFSAEPAVKKHYLRKWLK + G+ +D G+ W G+ K + KVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKA P G QLTNAGAST + AAGRSILGARARVTKRI T G A GSPGKEN XXXXXXX VVPI+REDDFQGWLAQQK GWK+ REQ +L +ARSQA+ +FRG+GS GARGGTA G+GAAG AEKRRRTAAMG+SGLQGYLTSAQDALLRGFWQVVEIRPSD PG FTVFA+TGPG++QV+PITIPRVFYVNCLEDKGPAGS+ MGRRVARTLPNGRASPFL+EVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRA+LHLGSVARVVQGRA ALKGVKSG+GQAPGFELEDLELVTAAAHPYLHPSVATFKH+YLYHSSSGKRGMVGLFYVQGTNEDIEPEPT EGG + G GLGPG+RPVIAKAVVW+VNPFSRR+GEQRPPF+RIFE+FT +N DSSCTFK SSV + +EAWAAADASL+SY RQRNGPTLVLSQGL+QGQELRRRLPALSELPVTHIPGNAEDER+PALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRH LWASETSRPDLGG EGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTAL VNNDN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QAVASAFRILKVLVTTWLDEVTHMGN HADSLLVHFYRW+CARQSLLHNA LH LV FSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFV+STVTSRDLFNTLQLEPK FWEQLLFLDDQ+YGGIQVQG EE XXXXXXXXXXXXXXXXXXXXXXXXX E E D+EGLQDS XXXXXXXXXXXXXXXXXXXXXXXX A PK + D+DL+ D XXXXXXX G A+RK P IVSHWNLAEYLPASVRQVFL+LVSTFLLKPHEKARQLRLDHERMVASLSNQLTQ SQP GPA P +GGGG PASQG +D ALAVQAA+RKEEANESQSMADFLK LV+ TLTDKVLETVPAIKKYSGSGPDAFPNKPGA+R+LTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEG Y DPCVSFVLPDVICSFCNLCRDLDLCRD+RLMDEDEEERWQC+QCNHPY+RSSIELSLVEAVQRRSVRYQLQDM+C+KCG+VATR+MSLTCPCSG LVAEESQQDFHKT++LLRQLA+FH+FGWL ETV +ILV DG ++ + G EE
Sbjct: 1 MVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAQCYDAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKKLLRSPHKQLLFLLSPQGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTDRAVPTAIFSAEPAVKKHYLRKWLKVDMHGIGVGGGDVNDGVVEDDNGLTEPFVWES--PTKGHYFCKFL-------KVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAAPPGTP--QLTNAGASTKAKPTPAAASTDIEDMTVAGGGCGGG----AAGRSILGARARVTKRIGNGTPAGGA-LAPGGSPGKENADVRGDEQXXXXXXX-------------VVPIRREDDFQGWLAQQKAGWKKRREQNRLXXXXEARSQAMASFRGSGSAGARGGTA-GLGAAGVAEKRRRTAAMGKSGLQGYLTSAQDALLRGFWQVVEIRPSDHPGSFTVFAMTGPGELQVIPITIPRVFYVNCLEDKGPAGSSIMGRRVARTLPNGRASPFLYEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAMLHLGSVARVVQGRAKALKGVKSGSGQAPGFELEDLELVTAAAHPYLHPSVATFKHIYLYHSSSGKRGMVGLFYVQGTNEDIEPEPT-AEGGAEDVGGEGGLGPGERPVIAKAVVWLVNPFSRRDGEQRPPFSRIFEKFTKCDSASVINTSNPDSSCTFKTSSVSSADEAWAAADASLASYSRQRNGPTLVLSQGLLQGQELRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHVLWASETSRPDLGGREGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALTVNNDNEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNAHADSLLVHFYRWICARQSLLHNATLHCLVHRLMHKVFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVISTVTSRDLFNTLQLEPKMFWEQLLFLDDQDYGGIQVQGDF------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSE-----------EGSEDDAEGLQDSXXXXXXXXXXXXXXXXXXXXXXXXXFKDRNGGGSGSRKDKAVPKAKRDNDLKPDEEXXXXXXXXXXXXXSGTVG----TMAERKMPSIVSHWNLAEYLPASVRQVFLILVSTFLLKPHEKARQLRLDHERMVASLSNQLTQWSQPNGPAPPGTDRGGSGGGGVPASQGEMDAALAVQAALRKEEANESQSMADFLKHLVTRTLTDKVLETVPAIKKYSGSGPDAFPNKPGAARELTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGQYSDPCVSFVLPDVICSFCNLCRDLDLCRDARLMDEDEEERWQCIQCNHPYERSSIELSLVEAVQRRSVRYQLQDMKCAKCGAVATRSMSLTCPCSGPLVAEESQQDFHKTMKLLRQLAIFHNFGWLLETVANILVADGLVEESVPAQGGREE 1597
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A2R5GVQ4_9STRA (DNA-directed DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVQ4_9STRA) HSP 1 Score: 1739 bits (4504), Expect = 0.000e+0 Identity = 1098/2600 (42.23%), Postives = 1486/2600 (57.15%), Query Frame = 1
Query: 304 VLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGN-----EKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAYMHT----EAQEQQPDDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQ------EEGVDVAWQK-EMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQANG-EYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHD-GHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNN-CKRALTWKWRGDMTPASRTEYQSVKMQLTYENVDGKPFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKA---KAAEEG----DAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGD-MQVVPITIPRVFYVN----CLEDKGPAGSAMGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFARIFERFTNN-SDSSCTFKA------------SSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDND---IWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQ-----------------------------GSLFGENAAEEGQK----------------------------------------------------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDL-EADXXXXXXXXXNGQESAQKLAGGDGAPPADRKA--PP----IVSHWNLAEYLPASVRQVFLVLVSTFLLKPHE-KARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMD-------EDEEERWQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETV 7656
LRE+ + +D+ +G+D ++EGP R+GW+ NMLP ++ E S L++YFL+QDG TFKA + ++PYFYVLVKEE +++++ + RRF EV +VD+EDLDM +HL+GK R L+L F +V+DLM V+ + V+ NK+R++A DAY T + PDD + +VD REYDV Y R SIDLD+ VG+WY V+ + EG+ V +K ++++KAEP++LA+DIECTK P KFP+ DQVFMISYM DGQG+LII+REVV+ED+E+FEYTPKP +PGPF +FNE +EE+ +R+FF+H ELRP + VTYNGD+FDWPF+++RA Y +D+ +E+GVG G EYRGRC HMD +YWVKRDSYLP GS GLKAVTK KLGYDPVEVDPEDMVR+A ERP MA+YSVSDAVATYYL+ Y+++F+FSLCTIIP+ PDDVLRKGSGTLCE LLMVEA RGNI+CPNK +P KF D G LLE +TYIGGHVECLETGV+R DLPEKFRL P A LI N+DRDLTFAIE+E+G+ R V NY VRSEI+E LEMLRD+P+R E P IYHLDVAAMYPNIIL+NRLQP AIV++ CASC FN + CKR + W WRG+ PA R+EYQ++K QL YE VDG P+ EL D+ +R R+K Y+ VY++ K T+ ++ T+C REN FYV+T++AFRDRRY+YK +TKK K K+ K E G D + EA ++ ++DSLQLAHKCILNSFYGYVMRKGARW SMEMAGIVT+TG +IKQAR+LVE+IGRPLELDTDGIWCILP+SFPENF T +G KI ISYPCVMLNADVH ++TNHQYQ L DP +Y+T+SECSI+FEVDGPYRCMVLP+S EEGKLLKKRYAVFNHDG+LAELKGFELKRRGEL++IK+FQSQVFEKFL G +L ECY AV E+AN WLDVL+++G D+ D+EL+ELIS+N++MS+ +E+YG K + TTARRL++ GAEM++D GLNC+++++ +P G T RA+P IFS K+ LR+WL+D + DF +RS++DW YY+DRLG ++KIITIPAA+Q V NP PR++HP WL + VRE N ++Q+K+ LF+A + + T+A A E +LG + +K + G EN XXXXXXXXXXXXXXXXXXXX E I DF GWLA +K W+R +E K +++ QA+T+ GA G A K R+GLQG++ + G+ QV+E+RP D G F VF + D ++ + + + R F++N C + P A+ LP+ A L+++ E +++ K V D L + GVYEL T R + LG + V Q L G G P F + ++ V A PYL S AT + +L+ +R V +F V T+ ++ + G + L P + W+ R G +RP + F ++ S S T A ++V T W + L R+ +G + + +EL + L P + + P+L WQ + V+++F WL +R+ CA YA +P+A++G D AM D F R L N H WAS PDLGG E D D + E+L P I PG YR+ C + LAV +++ + ++ +E ++G AL ++ AF IL+ LV E + +LL +FYRW+C+ +SL+++ AL R V F +L+AELRRLGA +V A+FQ++II T K D +A Y + V++TV S+ LF ++LE W+ L+F+DD N+G +Q G+L QK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG + DS D D ++ + +L EA+ +G A D A +A PP ++ W++A+YLP +++ F + V FLLKP E + L E++ A + + ++ P+ + +A G L A +R EA DF+ L+ + ++L +P I SG G ++FP G+ +PALEF+K+LC VLSL+ V +V+T +KQ L + VR+F+ E + +P ++ + DV+CS CN D DLCRD+ L+ + + W C +C +D +SIE L+ V+ + ++LQD C KCG V +S +C CSG V S +D ++ L +A F+ F WL E+V
Sbjct: 41 ALREQSERVDEMYGFDDFTEGPARVGWLLNMLPCTVNFVDPTLEKPVELSALELYFLQQDGNTFKAKILHRPYFYVLVKEE-FLKETKAMLERRFASDVSEVAMVDREDLDMADHLAGKHRVLLQLFFRNVNDLMNVRLEVQEAVRVNKSRSKAADAYNFTGHDATGSTELPDDLMEAIVDLREYDVQYQTRVSIDLDVNVGSWYEVSTRFSDGTGAEGLGVDLKKLDLLEKAEPRILAFDIECTKQPHKFPDAAFDQVFMISYMFDGQGYLIINREVVTEDIEDFEYTPKPEYPGPFEVFNEADEESTLRKFFEHCRELRPNVWVTYNGDFFDWPFIEKRAAT---YDMDLRTEVGVGPNKEGTEYRGRCSVHMDCLYWVKRDSYLPAGSRGLKAVTKAKLGYDPVEVDPEDMVRFARERPHHMASYSVSDAVATYYLFDKYINLFIFSLCTIIPLPPDDVLRKGSGTLCEMLLMVEARRGNILCPNKQVDPAQKFTDKGQLLEQDTYIGGHVECLETGVYRDDLPEKFRLDPLAFDELIANIDRDLTFAIEIEAGIPRREVVNYAAVRSEIVEALEMLRDTPVRLETPTIYHLDVAAMYPNIILTNRLQPSAIVDETDCASCSFNTGPDAACKRPMDWVWRGEFYPAKRSEYQAIKTQLEYEQVDGVPYHELPRGDRNRMLRQRVKTYSQTVYRRVKDTEITKKSATICQRENSFYVDTIKAFRDRRYEYKRLTKKWAKEKSTVEKRLETGSASADPLALDEARNKVLLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGGNIIKQARKLVERIGRPLELDTDGIWCILPASFPENFALKTGAGRKIPISYPCVMLNADVHAHFTNHQYQSLVDPKHLQYDTRSECSIYFEVDGPYRCMVLPASQEEGKLLKKRYAVFNHDGTLAELKGFELKRRGELKIIKIFQSQVFEKFLLGGSLPECYAAVAEIANYWLDVLFTRGKDLSDEELIELISENRSMSRKVEEYGDRKSVAMTTARRLSEIFGAEMIRDAGLNCKLLIARKPVGEMTTARAIPAVIFSLGEDAKRQALRRWLRDNSITDFDVRSIVDWDYYIDRLGKAVQKIITIPAALQNVANPVPRIEHPAWLLRDVREKNGRFKQSKLSALFQASAKSSTSK--TSAPAVADIE-------------------------------DMLGGGRDGSSSSGAKPKGKSARSG----ENXXXXXXXXXXXXXXXXXXXXXXXANAE----IGDPQDFDGWLAARKTMWRRRQELYKAQQKEQ---QALTS----------------SGAGGPAPKFSL-----RNGLQGFVQRREALSDFGYLQVLEVRPVDSAGTFRVFVLPENNDEVRSMYMKVNRKFFLNSREPCDPKEAPPWLALRDAARWKLPHAHAVEHLYQLEAPEKYMRKHAKTVADILEQPNVAGVYELQTSPESRILSELGCMISVNQRN---LSG--DGTASRP-FAMAEVRKVARAGAPYLLGSGATLQRFFLFVGGRPQRRAVVIFQVSQTSNELAKIAWSAMRGDKAADQVDTL-LSLAPQEVRIHAWIEG--HERSGTERPSLRKAMRSFLDDCSKESRTAHAENLRSSVAHAEVTTVATEGALWHKVNEHLVKMARELSGAVTAVVHSALSPRELLAKSMQLGHFPCIWMTAREDTRALPSLQWQKYLFDEAVRQYFAHSLWLFERMRCAHYAQVPVAHLGDDYAVAMMDVMFMRNLSRNSHVSWASPACTPDLGGMESDSADSALLAVEEL--PVIASPGTYRSYCAVFSLKHLAVNTMLHADEVHDIECAEGSLALEQHS-----MGALAPDGGTQRLDAEGAVVHAKVHAATGVLGSAAECLGAFNILRGLVRRMFREALQTNEDYCWALLTNFYRWLCSPKSLMYDPALLRFVQQLMSKVFLQLVAELRRLGAKIVSANFQRIIICTGKRDAASASAYVEHVINTVQSKSLFEDIELELADTWKTLIFMDDANFGAVQDNPTYNEELEAYEKRQARRKQIESERQARRDGTLVDAPRETSNQKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVSPVVRKTAKADKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAADGYVENEDSASDSDLDDEEFDGNLTRLKRRVMTDSRRPKRGRNKREDRI----IEREDELNEAEDMDDFVVDDDGDSFYGAAASRDADEEALLEAARPPFKHTLILQWDVAQYLPEELQRYFELYVGAFLLKPVEFRESWLSAQKEKLRAEMHVEREETKDPSRDIAGKA--------DGSNSDELDELALLRVNEAELEVEEKDFVTKLLKNEVVAELLRLIPRIT-MSGLGAESFPKLAGSHLVYKDPALEFVKTLCVVLSLEGQVHHQVQTAKKQLLRLLHVREFAPEAQFHNPSLTIHMRDVVCSHCNAAVDFDLCRDTALVQGQLAAGPDAGTQPWHCTECAETFDMASIEHRLIRRVEDLVLAFELQDFECIKCGQVRADVLSASCTCSGDWVLTISPKDQETALRPLHNVAKFYGFEWLLESV 2542
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A3R7G7W5_9STRA (DNA polymerase epsilon catalytic subunit n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G7W5_9STRA) HSP 1 Score: 1735 bits (4494), Expect = 0.000e+0 Identity = 1063/2612 (40.70%), Postives = 1443/2612 (55.25%), Query Frame = 1
Query: 295 AKAVLREKGDALDKRFGYDRYSE-------------------GPPRLGWIFNMLPTSIPDA--SGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAY-MHTEAQEQQPDDFL-------------------SVLVDAREYDVPYYVRCSIDLDIRVGAWYMV----TPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGL-QANGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLT-KFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESN---------NCKRALTWKWRGDMTPASRTEYQSVKMQLTYENV----------------DGK--------PFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRS-GLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDM-QVVPITIPRVFYVNCLEDKGPAGSAM-----GRRVARTLPNGRASP-FLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHP-----------SVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFARIFERFTNNSDS--------SCTFKASSVGTHEEAWAAADASLSSYIRQRN---GPTLVLSQGLV-QGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDN--DIWAEDL----------------------ASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHE-KARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLM-------DEDEEER-----------WQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEES-QQDFHKTIQLLRQLALFHSFGWLQETVEHI 7665
AK +KGD LDK+FG+ E RLGW+ N+ ++PD NE S L++YFLEQ G FK V Y+PYFYV + R ++ C+R+ FE + V +EDLDM +HL+G+ ++KLSFH+V+DLM VKK L P V N+ R +A+ AY M + +EQ +D L S L++ REYDVPY +R +IDLDIRVGAWY V T DV QK+MVDKAEP V A+DIECTKAPLKFP+ ++DQ++MISYM+D QG+LI++RE VSE++++FEYTPK ++PGPF +FNE NEE +++RFF+HV E +P I VTYNGD+FDWPF++ RA+ +G++M EIGV L + +GEYRGRC HMDA WVKRDSYLPQGS GLKAVTKYKLGYDPVEVD EDMV A + P +MA+YSVSDAVAT+YLY YVH+FVFSLCTIIP+G +DVLRKGSGTLCEALLMVEA+ GNI+CPNK S KF+ HL+E+ETY+GGHVECLE+GVFR+D F+LVPSA Q LIDNVDRDL F++E+E V D V+NYD V+ +I++QL LR+ P R+E P IYHLDVAAMYPNIIL+NRLQP AIVN+ CA+C FN E +C+R + W WRGD PA+R EY S+K QL YEN D K PF +L Q ++ R K+Y VYKKTK+T+E++R TVCMRENPFYVNTVRAFRDRRY+YK +TK KK ++AAE D + +A ++ V+DSLQLAHKCILNSFYGYVMRKGARW SMEMAGIVT+TG+ +I ARELVEQIGRPLELDTDGIW ILP SFPE F+F K G ISYPCVMLNADVH +TN QY +L DP T KY T ECSI FEVDGPY+ MVLP+STEEGKLLKKRYAVFN D SLAELKGFELKRRGEL++IK FQSQVF+ FL GDTL ECY +V + AN WLDV+ ++G ++DDELM LI++NK+MS L+DY K TS TTARRL +FLG EM+KDKGL C+MI++ RP+G VTERA+PTAIF+ E AVK+H+L+KWLKDP ++DF IRS+LDW YY R + ++KII++PAA Q V NP PR++ PDW+RK VRE N ++Q + Q FK G ++ RS + +R G T + +ND VP F WL +K WK +R+ +R RS G G A+ ++ A AA G G++ ++ +A AL +WQ+VEI+ ++ G+FT + +T M Q + + +PR+FY+ C D+ + + RRV+R +P+ + P + EV + E ++Q+ K++ L ++GVYEL + RA+ LG VA+VV ++ +EL DL+ + A PYL S + + V LY + S KR ++GL ++ E + GG EGD A VW V+PFS + + + FE+ S SC FK V T ++A++ +A+L+ + PT+V++Q + + LR ++ L P+ +P N ED FPAL W+ ++M+ R F ++ +D L CARYAHLP+ N D A+ D + R+L ++H W S +S PDLGG E + ++++ L S + + G++ ++C+ELE+ GLAV +++ +SQ+ ++EG + ++ D ++ AFR+L+V+VTT + N AD +L FYRW+C+ SL + ALH +V F +L+AE RRLG+ +V+A F K+II T K V+ A+ Y +F++ TV S +LF + PKK++ L F+D +NYG I L + AA E +++ ++D E ++ K IVSHWN+A YLP V + FL+LV F+ + E + R+LR + A L QP E+ + +A + + LVS ++K+L VP I Y+ D+FP G+ L +P+LE +K + V L+P+V +V +R+ L + + +FS E +R+P +SF + DVIC CNLCR +DLCRD +L +ED+E + W C +C YD+++ E+ LVE VQ +SV YQLQD+ C KC A M CPCSG ++ +T++LL+++A H+F WL ETV+ +
Sbjct: 47 AKQYALKKGDELDKKFGFHLLPELLEQEEEARKEHDISMDDQDHARLGWLLNLRACTLPDPVEGKNEVSALELYFLEQAGKAFKTRVIYQPYFYVRPETNRSLEVIAYCLRK-FEGLVAKAERVFREDLDMADHLNGRKALYVKLSFHTVADLMAVKKDLAPLVARNQERLQARQAYEMQGQTREQVTEDELMFGGDGLDGVKGAGTDESESSLLELREYDVPYPMRVAIDLDIRVGAWYHVNYDPTAPYAPSDVKRQKDMVDKAEPVVCAFDIECTKAPLKFPDAQVDQIYMISYMIDRQGYLIVNREFVSEEIQDFEYTPKEAYPGPFIVFNEENEEQLLKRFFEHVVEEQPHIFVTYNGDFFDWPFIETRAQI---HGINMGHEIGVSLDERSGEYRGRCSVHMDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMVNLARDEPLKMASYSVSDAVATFYLYDKYVHLFVFSLCTIIPLGSEDVLRKGSGTLCEALLMVEAFGGNIICPNKQSSAREEKFYKNHLVETETYVGGHVECLESGVFRADFLYDFQLVPSAFQQLIDNVDRDLRFSLEIEMNVPIDRVTNYDAVKKDIVDQLVGLRERPNRKETPLIYHLDVAAMYPNIILTNRLQPCAIVNEADCAACAFNTECGRAAIKQGDASCQREMDWVWRGDFYPANRPEYYSIKTQLEYENFPVDKGPPGAANASTRNDPKGSTPGSSVPFAQLPTEKQELLLKQRFKSYCSSVYKKTKITEEQKRSATVCMRENPFYVNTVRAFRDRRYEYKGLTKVWKKRVSQAAEAKDLLAKIDAQNKCLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGSNIITGARELVEQIGRPLELDTDGIWAILPKSFPETFSFKLKDGSSRSISYPCVMLNADVHAKFTNPQYHEL-DPETGKYETHQECSILFEVDGPYKAMVLPASTEEGKLLKKRYAVFNFDHSLAELKGFELKRRGELQIIKAFQSQVFDCFLDGDTLEECYSSVAKCANHWLDVIDTRGKSMEDDELMALITENKSMSGRLDDYEGQKSTSITTARRLGEFLGEEMIKDKGLTCKMIIAARPYGEKVTERAIPTAIFATEDAVKRHFLKKWLKDPHLQDFDIRSILDWDYYRGRFASTVQKIISLPAAFQNVRNPVPRIELPDWMRKQVREKNAKHQQGNMKQFFKTADKGVE----------------------NGDYIAELIDMEDLVKGNPSSHRSKNPSLSRKRGNKEDAGGDTGPTISAEEIDNDADSDGNMPATKVKLGE------------VP------FTDWLKNRKKKWKSMLGKRRREREERMRSFGEFGLMAGGRGSAKRFQSSSSSA---------LAAKGNGVGMENFVFNAGSALQSEYWQIVEIQ-QEQGGLFTCWVLTAHSQMLQRITLKMPRIFYLTC--DEADTDNLLTLLPGSRRVSRIVPHYSSKPQSVLEVTLSERQYQQYHKEINQILGDPHVKGVYELQVSALTRAVCALGCVAKVVNPHLSSSN---------QEYELSDLQFQSTAQAPYLMDTDLPTGGTLSLSNSLMRRVLLYFAQSKKRAILGLVVLKD-----EEDGGDTSGGAISEGD--------------ANVWYVDPFSNVKS-RGSDLKQFFEQLLQESQEEGGDAPIQSCAFKTHVVKTVQDAFSGVNATLARLTSNKQLAPKPTIVIAQTCIPSSKRLREKMQGLHSFPIATLPWNEEDTLFPALTWRKLMGEKMLTRCFEMTQFYSDVLDCARYAHLPVGNFTGDHSIAILDTLYSRILTKHKHMWWHSPSSLPDLGGKEQEQQFQQLFSQSLFGSAQATQMKNDKGSATQHRVDTSVVVCEKGSFVDVCVELELDGLAVNAILVASQIHSIEGLGVAHQMEIDFDGNGDDESNTKAEGTSAAMAAEGDAE-------------ESCHEAFRLLRVMVTTLFKDFLSSRNKFADHVLQQFYRWLCSPGSLCFDPALHAMVKRLMEKLFLQLLAEFRRLGSHIVYADFSKIIICTKKKSVRDAQTYLQFILQTVLSNELFQVMNFTPKKYFSNLFFMDAENYGCI-----LLKDVAATE--------------------------------------------------------------------------------------------ERIENEADTED---------------------------SEVKPLEIVSHWNIANYLPRGVDEYFLILVGQFIRRRAEFQLRELRKGKD---AKLDIAEDADEQPL------------------------------DEDEKQLSPLAKYSQRLVSSYFSEKMLRLVPEILTYNMDR-DSFPVFAGSHLPLESPSLELVKFVSSVFLLEPSVEAQVGKMRRTLLKLLRMSEFSDESQFRNPSLSFTVQDVICLCCNLCRSVDLCRDPQLFKCSVASSNEDDEGQENAEEAEETLSWHCPRCFALYDKTAFEMRLVEMVQAQSVAYQLQDLYCRKCHLPAEHKMREYCPCSGTYALMPGVRESLLETLRLLKRIAQQHNFEWLLETVQRL 2401
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A662YIT8_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIT8_9STRA) HSP 1 Score: 1733 bits (4489), Expect = 0.000e+0 Identity = 1081/2618 (41.29%), Postives = 1459/2618 (55.73%), Query Frame = 1
Query: 295 AKAVLREKGDALDKRFGYDRY-------------------SEGPPRLGWIFNMLPTSIPD-ASGN-EKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAY-MHTEAQEQQPDDFL-------------------SVLVDAREYDVPYYVRCSIDLDIRVGAWYMVT-----PQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQA-NGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTK-FHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFN---------QESNNCKRALTWKWRGDMTPASRTEYQSVKMQLTYEN---------------------VDGKPFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQR----EDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRS---GLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDM-QVVPITIPRVFYVNCLEDKG-------PAGSAMGRRVARTLPNGRASPF-LHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYL--------------HPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEG-DGEGLGPGDRPVIAKAVVWMVNPFSR---REGEQRPPFARIFERFTNNSDS----SCTFKASSVGTHEEAWAAADASLSSYIRQRN---GPTLVLSQGLVQGQE-LRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDN--DIWAEDL-----------------ASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQS----MADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLM--------DEDEEER---------WQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRL-VAEESQQDFHKTIQLLRQLALFHSFGWLQETVEHI 7665
AK +KGD LDK+FG+ E RLGW+ N+ ++PD A G E SGL++YFLEQDG FK V Y+PYFYV + R Q+ I R+FE + V +EDLDM +HL+GK ++KLSF +VSDLM VKK L P V N+ R +A+ AY M +A+EQ +D L S L++ REYDVPY +R +IDLDIRVGAWY VT P DV QK+MVDKAEP V A+DIECTKAPLKFP+ ++DQ++MISYM+D QG+LI++RE VSE++ +FEYTPK S+PGPF +FNEPNEE +I+RFF+HV + +P I VTYNGD+FDWPF++ RA+ +G++M EIG+ L +GEYRGR H+DA WVKRDSYLPQGS GLKAVTKYKLGYDPVEVD EDMV A + P +MA+YSVSDAVAT+YLY YVH+FVFSLCTIIP+G +DVLRKGSGTLCEALLMVEA+ GNI+CPNK S + F+ GHL+E+ETY+GGHVECLE+GVFR+D F+LVPSA Q LIDN+DRDL F++E+E V D V+NYDEV+ +I+++L LR+ P R+E+P IYHLDVAAMYPNIIL+NRLQP AIVN+ CA+C FN Q+ +C+R + W WRGD PA+R EY S+K Q+ YEN V PF +L Q ++ R K+Y VYKKTK+T+E++R TVCMRENPFYVNTVRAFRDRRY+YK +TK KK ++AAE D + EA ++ V+DSLQLAHKCILNSFYGYVMRKGARW SMEMAGIVT+TG+ +I ARELVEQIGRPLELDTDGIW ILP+SFPE F+F K G ISYPCVMLNADVH +TN QY +L DPAT KY T ECSI FEVDGPY+ MVLP+STEEGKLLKKRYAVFN D SLAELKGFELKRRGEL++IK FQSQVFE FL GD L ECY +V + AN+WLDV+ +KG +DD+ELM LI++NK+MS LE+Y K TS TTA+RL +FLG +M+KDKGL C+MI++ RP+G VTERA+PTAIF+ E AVK+H+L+KWLKDP ++DF IR++LDW YY R + ++KII++PAA Q V+NP PR++ PDW+RK VRE N ++Q + Q FK G ++G+ L + + P +E D +V P+ + E F WL +K WK L +R R + + +F G G R G GM ++ + +A R G++ ++ + AL R +WQ+VEI+ ++ G+FT + +T M Q + + +PR+FY++C E P GS RRV R +P+ + P + EV + E ++Q+ K++ L ++GVYEL + RA+ LG VA+VV + +EL DL+ + A PYL PS + + V LY + KR ++ L + EEG DGE G A VW V+PFS R + + F ++ + + SC FK V T ++ ++ +A+L+ + PT+V++Q + + LR ++ L P+ +P N ED FPAL W+ ++M+ R F ++ D L CARYAHLP+ N D A+ D + R+L ++H W S TS PDLGG E + ++++ L +S + + G++ ++C+ELE+ GLAV +++ +SQ+ ++EG L V + XXXXXXXXX ++ AFR+L+V+VTT + N AD +L FYRW+ + SL + AL +V F +L+AELRRLG+ +V+A F K+I+ T K V+ A+ Y +F++ TV S +LF L PKK++ L FLD +NYG I +Q + A EEG+ GD D E D K IVSHWN+A YLP V + FL+LV F+ + E QL Q ++ G D L +E ++S+ +A + + LV+ ++K+L VP I ++ D+FP G+ L +PALE +K + V L+PTV +V +++ L + +F+ E +R+P +SF + DVIC CNLCR +DLCRD +L + DEEE W C +C YD+++ E+ LVE VQ +SV YQLQD+ C KC A M CPCSG + +++ +T++LL+++A H+F WL ETV+ +
Sbjct: 55 AKQYAMQKGDELDKKFGFHLLPDLLEQEEEARKDQPGTEDGEDHARLGWLLNLRACTLPDPAEGKFEVSGLELYFLEQDGKAFKTRVIYQPYFYVRSEPNR-SQEVIAYCLRKFEGLVAKAERVFREDLDMADHLNGKKALYVKLSFATVSDLMTVKKELAPLVARNQERQQARQAYEMQGQAREQVTEDDLLFGGGAGDGGKSAGTDESESALLELREYDVPYTMRVAIDLDIRVGAWYHVTYDPTTPYAPS-DVTRQKDMVDKAEPVVCAFDIECTKAPLKFPDAQVDQIYMISYMIDRQGYLIVNREFVSEEINDFEYTPKESYPGPFIVFNEPNEEQLIKRFFEHVVDEQPHIFVTYNGDFFDWPFIETRAQI---HGINMAHEIGISLDIRSGEYRGRSSVHLDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMVALARDEPLKMASYSVSDAVATFYLYDKYVHLFVFSLCTIIPLGSEDVLRKGSGTLCEALLMVEAFEGNIICPNKQSSAHEENFYKGHLVENETYVGGHVECLESGVFRADFLYDFQLVPSAFQQLIDNIDRDLRFSLEIEMNVPVDRVANYDEVKKDIVDRLVGLRERPNRKEKPLIYHLDVAAMYPNIILTNRLQPCAIVNEADCAACAFNTECGRAAIKQQDASCQREMEWVWRGDFYPATRPEYYSIKTQIEYENFPPEHVVAGADKARGANGNAPVPTVPFAQLHTDRQEQLLKQRFKSYCSSVYKKTKITEEQKRAATVCMRENPFYVNTVRAFRDRRYEYKGLTKTWKKKVSQAAEAKDLLAKIEAQNKCLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGSNIITGARELVEQIGRPLELDTDGIWAILPASFPETFSFKLKDGSSRSISYPCVMLNADVHAKFTNPQYHEL-DPATGKYKTHQECSILFEVDGPYKAMVLPASTEEGKLLKKRYAVFNFDHSLAELKGFELKRRGELQLIKAFQSQVFECFLDGDNLEECYASVAKCANRWLDVIDTKGKSMDDEELMALITENKSMSGKLEEYAGQKSTSITTAKRLGEFLGEDMIKDKGLTCKMIIAARPYGEKVTERAIPTAIFATEDAVKRHFLKKWLKDPHLQDFDIRTILDWDYYRVRFASTVQKIISLPAAFQNVKNPVPRIELPDWMRKQVREKNAKHQQGNMKQFFKTAAKG---------------------DDNGDYVAQLIDMEDMMKGKPSSSGKGKLQSLKXXXXXXXXXXXXGSSESDDPIEEIDDG---------------------DVTADEPLAKVKLGEVPFTDWLKNRKKKWKTL-----LGKRRRERDERLRSFGGGADFGMRNG---GMPSSKRFQSSTTSAVTVRGNGIGMENFVLNTASALQREYWQIVEIQ-QEQGGLFTCWVLTARSQMLQRITLKMPRLFYLSCDEADNDDLLALLPVGS---RRVLRIVPHFSSKPQPVLEVMLSERQYQQYHKEMSQILSDPRVKGVYELHVSALTRAVCALGCVAKVVNPHHSTTN---------QEYELSDLQFQSTAQAPYLVDLQRPMLSGNAAPRPSNSLMRRVLLYFAQQKKRAIICLVVLH-----------------EEEGVDGESAG-----CDGDANVWYVDPFSNVKSRGSDLKQFFEQLLQETQEEGATAAIQSCAFKTHVVKTAQDGFSGVNATLARLASNKQLAAKPTIVIAQTCISSSKRLREKMQGLHSFPIAMLPWNEEDTLFPALTWRKLMGEKMLTRCFEMTQYYTDVLDCARYAHLPVGNFTGDHSIAILDTLYSRILSKHKHLWWHSPTSLPDLGGKEQEQQYQQLFSQSLLGSAAGKSDEAVQHRVDSSVVVCEKGSFVDVCVELELDGLAVNAILVASQIHSIEG------LGVAHQRELDFEGNGESNGXXXXXXXXXEGDAE-----------ESCHEAFRLLRVMVTTLFKDFLASRNKFADHVLQQFYRWLSSSSSLCFDPALQTMVKRLMEKLFLQLLAELRRLGSQIVYADFSKIILCTKKQSVRDAQTYLQFILQTVLSNELFQVLNFTPKKYFSHLFFLDAENYGCILLQSA----EAEEEGEG---------------------------------------------------------------------------------------------GDRDTEGD--------------------------TTEKPLEIVSHWNVANYLPKGVDEYFLLLVGQFIRRRAEF-----------------QLRQQAK-------------------GGDARLEAAEEAMEEPLDDSEKQLSPLAKYSQRLVASYFSEKLLRVVPEILTHNLDR-DSFPVFAGSHLPLEHPALELVKFVSAVFLLEPTVEAQVGKMKRTLLKLLRTSEFADEAQFRNPSLSFTVQDVICLSCNLCRAVDLCRDPQLFKGTASGAGEGDEEEAATEVEAKAAWHCPRCFALYDKTAFEMRLVELVQAQSVAYQLQDLYCRKCRLPAEHKMREYCPCSGTYALLPGAREALMETLRLLKRIAQQHAFEWLLETVQRL 2404
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A2R6XQA7_MARPO (DNA polymerase epsilon catalytic subunit n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XQA7_MARPO) HSP 1 Score: 1729 bits (4477), Expect = 0.000e+0 Identity = 1037/2501 (41.46%), Postives = 1400/2501 (55.98%), Query Frame = 1
Query: 304 VLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNEK--SGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAY------MHTEAQE-QQPDDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQA-NGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNNCKRALTWKWRGDMTPASRTEYQSVKMQL-------TYENVDGKPFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDT--VCMRENPFYVNTVRAFRDRRYDYKIMTK--KAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGK-IRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRT--DARSQAVTAF-RGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNCLEDKGPAGSAMGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREG-----EQRPPFARIFERFTNNSDSSCTFKASSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGS--QGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAI------KKYSGS----GPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMDEDEEERWQCVQ--CNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETVEHILVT 7674
V R DAL+ +FG+D ++EG PRLGW+ NM +S+ D+ + K S +++YF+ QDG TFK+ V ++PYFY+ KE ++ +RRR+E + +V+KEDLDM NHLSG FLK+SF++V +LM VK L+P V+ N+ + EA AY M QE DF+ +++ RE+DVPY+VR +ID D+R G WY VT + V + + +++ +AE ++ A+DIE TK PLKFP+ D V MISYM+DGQG+LI++RE V ED+++ EYTPKP + G F + N PNE+AV+ +F H+ +++P I VTYNGD+FDWPF+++R+K +G+ M EIG A GE + H+D WVKRDSYLPQGS GLKAVTK KLGYDP+EV+PEDMVR+A E+P M++YSVSDAV+TYYLY TYVH F+FSL TI+PM PD+VLRKGSGTLCE LLMVEA++GNI+CPNKH K ++G +L+SETYIGGHVECLE+GVFRSDLP KFRLVP A Q LID +DRDL +AIEVE + D+V+NYDEV+ I QLE LRD+P REE P IYHLDVAAMYPNIIL+NRLQP +IV ++CA+CDFN+ C R L W WRG+ ASR+EY +K Q+ T E D + F +L + +Q + ++ RLK Y KVYK+ + K V T +CMRENPFYV+TVR+FRDRRY+YK + K K K +AKA+ G+ + +EA D V+DSLQLAHKCILNSFYGYVMRKGARW SMEMAG+VTYTGA +I+ A +LVEQIG+PLELDTDGIWC LP SFPENF F T K + ISYPCVMLN DV N TN QYQ + DP +R Y T SECSI FEVDGPY+ M+LP+S EEG L+KKRYAVFN DG+LAELKGFE+KRRGEL++IKVFQ++VFE FL+GDTL ECY AV E+AN+WLD+L ++G D+ D EL++ IS++ TMS++LE+YG K + TTA+RLADFLG MVKDKGL+CR I++ P GAPV+ERA+P AIF EPA+ K YL+KW K D RS++DW YY RL + I+KIITIPAAMQKV NP PRV HP+WL K VRE +D YRQ + +F+ PA A P + + T R ++ KG D P +E + E P +E D++ W+ +K K REQRK +R AV A R +G AG+GA S Q AL R WQ++++ P+ PG F + + G+M + I +PRVFY+N + P + G+RV R LP+ + L EV DEA+F+ K + L +EGVYE + +AIL LG V V K K A + +++L + T A YL ++ +F ++Y S RG+ L+ P K +V +VNP + +E E++ A +N S+ T K + +H++A + SL + Q GPT+ L+Q ++L +P L+E P IP N D ++ ALGWQ A + + R + WL +R+ ARYAH+PL N+ +D AD F+ R LR N+ LW+S+ PDLGG DD+ +++ P + PGAYRN+ IE +I+ LAV +++ SSQ+ EG G + A N+ + + AFR+LK LV WL + GN ++D+LL H YRW+C+ QS LH+ AL R++ F+ L+ ELR+LGA +VFA F K+IIATNKS++ A+ Y ++++ TV +R+LF + L PK++W LLF+D NYGGI+ N A + S + +G P + IVS+WN+AEYLP + F+V+VS ++ P + A S + +T AA EA E FLK+ V T+K+L+TV + KKY FP G+ ++T+ ALEFIK +C V LD V EV LRK L VR+FS E +RDPC+SF+LP+VICS+CN CRD+DLCRD+ L++ D W+CV C PY+R +E +L++ V++R Y LQD+ C KC V ++ C C+G ES +DF + +++ +A++H F LQE V IL T
Sbjct: 54 VWRTAEDALEAKFGFDVFAEGEPRLGWLLNMAASSMQDSEDDSKTFSCVNLYFMCQDGSTFKSQVKFQPYFYLGTKENTELEVDAY-LRRRYEGQIASIQIVEKEDLDMKNHLSGTRHTFLKVSFNNVQELMSVKSELLPIVERNQAKVEAAQAYNTLFQGMRGGLQETSNVQDFVDYMLEVREFDVPYHVRFAIDKDVRCGLWYTVTVESNKVKLEKRADLLQRAEARICAFDIETTKLPLKFPDASYDSVMMISYMIDGQGYLIVNRECVGEDIQDLEYTPKPEYEGFFQVTNAPNEKAVLETWFNHMRDVKPGIYVTYNGDFFDWPFLEQRSKH---HGMSMYEEIGFRCDAVQGECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAMEKPQVMSSYSVSDAVSTYYLYMTYVHPFIFSLATILPMPPDEVLRKGSGTLCEMLLMVEAFKGNIICPNKHKSEEEKVYNGRILDSETYIGGHVECLESGVFRSDLPTKFRLVPGAYQRLIDKLDRDLKYAIEVEGKMDLDSVTNYDEVKHNISTQLEALRDAPNREETPLIYHLDVAAMYPNIILTNRLQPPSIVTDDVCAACDFNRPDKTCLRQLEWVWRGETFSASRSEYNHLKNQIESEQFPPTSEGGDMRYFRDLPKDEQQSKLKDRLKKYCQKVYKRV-LDKPISDVRTAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLGEAKAS--GNPIKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAHKLVEQIGKPLELDTDGIWCCLPGSFPENFVFKTSDPKKKLPISYPCVMLNVDVAVNNTNDQYQTMVDPVSRTYATSSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFENFLQGDTLEECYAAVAEIANRWLDMLENQGLDLADSELLDYISESSTMSKSLEEYGDRKSCAMTTAKRLADFLGDAMVKDKGLSCRYIVAKDPPGAPVSERAIPVAIFETEPAIMKAYLKKWCKSSS--DVVFRSIVDWAYYRQRLSSAIQKIITIPAAMQKVSNPVPRVTHPEWLWKKVREKDDKYRQKSLTDMFQKKPA-ALPDGIEDLEDMCKTSEKH---------------------------------RPTLSAPSHKKGDL---IDEIPLQEGE---CIGQEDIPPIEKSLNEDPENEARSKTP-DKEVDYEAWVEYKKLKRKETREQRKRQREVIDPTGDDAVVALPRNVSRKDGKGKRQAGVGA--------------------MFRSQQAALTRSHWQLLQLVPTQSPGFFRAWILVA-GEMYKLQIQVPRVFYINT---RAPPDTESGKRVNRVLPHMKPCFNLLEVVCDEAQFKDARKFLSAHLADPDVEGVYETKISPLQQAILRLGCVCTVDA------KASKRNANAT--WSVDELHMKTTAESAYLKVALNSF---FIYQSCMNTRGLYTLY---------------------------------TPAAEKILVVVVNPRNNKEVSSVQLEKQFRDAASNSGLSNLEVSTWTVKVEYLSSHQDAGRLLNRSLVEFRDQHPGPTVALTQ-CPNTEDLMAIIPLLNEFPCVQIPCNVRDSQYQALGWQPIAGRVAMHRCVASSVWLQERISLARYAHVPLGNVDSDWLLFTADTFYSRALRENQQVLWSSDDGVPDLGGAITDDSTSLEDEVQQPAVSFPGAYRNVTIEFKIYHLAVNALLKSSQISEFEGGTVDGDGSAAFNDGSNTWNEEIFC-------------------------------SPAFRVLKQLVGGWLADAISTGNNYSDALLQHVYRWICSPQSKLHDPALQRVLHKVMQKVFALLLMELRKLGATIVFADFNKIIIATNKSNITMAQGYCEYLLKTVKARELFEWIDLRPKQYWHSLLFMDQHNYGGIKA-------NTATQ---------------------------------------------------------------------------------------------------------------------SFEHQEDQNGTLPEE-----IVSYWNIAEYLPKVTQDYFVVIVSEYIYIPWKHAMDEAARRRAGPVSSTPSITV-------------------------------AAAADMEAGEIL----FLKEKVQSHFTEKLLKTVRDVQRHMNTKKYEDDEELQSAREFPKLAGSHLEMTDAALEFIKHVCAVFMLDQRVQHEVLVLRKNLLKLARVREFSQEATFRDPCLSFILPNVICSYCNDCRDMDLCRDAALIERD----WRCVMPLCGQPYNREWVENALLQIVRKRERLYHLQDLLCVKCRQVKASHLAEQCTCAGNFRCRESPKDFLQRMRVFHNIAVYHGFDLLQECVSWILQT 2236
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: A0A2K1JKR7_PHYPA (DNA polymerase epsilon catalytic subunit n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JKR7_PHYPA) HSP 1 Score: 1726 bits (4471), Expect = 0.000e+0 Identity = 1030/2498 (41.23%), Postives = 1399/2498 (56.00%), Query Frame = 1
Query: 304 VLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNE--KSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAY--MHTEAQEQQP---DDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQAN---GEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNNCKRALTWKWRGDMTPASRTEYQSVKMQLTYEN----VDGKP---FVELDETDQATNVRARLKNYAHKVYKKT-KVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTK--KAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNCLEDKGPAGSAMGRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARV-VQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFARIFERFTNNSDSSC-----TFKASSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEG---------SQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDA----------FPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMDEDEEERWQCV--QCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETV 7656
V R DAL+ FGY ++EG PRLGW+ NM+ +++ D + + S +++YF+ QDG TFKA + PYFY+ KE ++ +RRR+E + +V+KEDLD+ NHLSG ++LKLSF++V +LM VK L+P VQ N+ + +A AY + + + P D++ +VD REYDVPY+VR +ID DIR G WYMV+ + + + +++ +AE +V A+DIE TK PLKFP+ D V MISYM+DGQG+LI++RE V ++E+ EYTPKP F G F + N E+ ++ +F H+ E++P I VTYNGD+FDWPF+ RA +G+ M EIG Q N GE + H+D WVKRDSYLPQGS GLKAVTK KLG+DP+EV+PEDMVR+A E+P MA+YSVSDAV+TYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCE LLMV+A++GNI+CPNKH K ++G +LESETYIGGHVECLE+GVFRSD+P +F L P A Q LI+N+DRDL +AIE E ++ ++V+NYDEV+ +I +L LRD+P+R+E P IYHLDVAAMYPNIIL+NRLQP +IV E+CA+CDFN+ C R L W WRG+ A R+E+ +K Q+ E DG P F +L + +Q + ++ RLK Y KVYK+ + + R +VCMRENPFYV+TV++FRDRRY+YK + K K K AKA+ G+ + +EA D ++DSLQLAHKCILNSFYGYVMRKGARW SMEMAG+VTYTGA +I+ AR LVEQIG+PLELDTDGIWC LP SFPENFTF TK+G K+ ISYPCVMLN DV N TN QYQ L DP +R Y T SECSI FEVDGPY+ M++P+S EE LLKKRYAVFNHDG+LAELKGFE+KRRGEL++IKVFQ+++F+ FL G TL ECY +V VAN+WLD+L ++G DV D EL+E IS++ TMS++LEDYG K + TTARRLADFLG EMVKDKGL+CR I++ P GAPV+ERA+P AIF AEP V + Y+RKW K D IRS++DW YY RL + I+KIITIPAA+QKV NP PRV HPDWL K +RE +D YRQ + +F A A + ++ G+ E GR + RV + + + T + DG +V E P + DD++ WL +K WK R++RK R +A +GGA + G AA + G+ + + + AL WQ++ + + G FT + + GDM VP+ +PRVFY+N G RV RTLP+GR L EV +DE +F+ +++ L +EGVYE PL A+L LG V +V + R ++ G+ L DL + T YL + +++LYHS RG+ L+ PVI++ +V +VNPF+ RE + + N S S+ T K V ++ +A +L Y Q GPTL + + + + ALSELP + NA D + LGWQ A + +QR + WL +R+ ARYAH+PL N +D AD F+ R LR + LW S PDLGG ++ +A+++ P ++ PGAYR+I IEL++H LAV +++ SSQ+ LEG SQ +L V N + A AFRILK LV WL + GN AD LL H YRW+C+ S +H+ ALHR++ F+ L+AELR+L A +VFA F ++IIAT K ++ AA+ Y ++++ T+ SR+LF L+LEPK++W LLF+D NYGGIQ + +A SDL D P A I+S WN+AE+LP + F+V+VS ++ P + ++ D ++A A++GG + +I E+Q ++ +LK+ ++ TDK+L V ++++ + D FP G+ +T+PALEFIK +C VL+LD V V +RK L V VR+FSAE + DPC SF LP+VICS+CN CRDLDLCRD+ L++ D W+CV C PYDR+ IE +L++ V++R Y LQD+ C KC V + ++ C C+G S F K +Q+ +A +H F L+E V
Sbjct: 56 VWRTSEDALEASFGYQIFTEGEPRLGWLLNMVSSAMDDPNNDNITYSCVNLYFMCQDGSTFKAQFKFAPYFYLGTKENTELEVDAY-LRRRYEGQIANIEIVNKEDLDLKNHLSGLQSKYLKLSFNTVQELMNVKSELLPLVQRNQAKLDAAQAYESLFNNSASKAPGKMQDYIEYMVDMREYDVPYHVRFAIDNDIRCGLWYMVSVESSQTKLERRTDLLQRAEVRVCAFDIETTKLPLKFPDASYDSVMMISYMIDGQGYLIVNRECVGAEIEDLEYTPKPEFEGHFKVTNTRTEKELLVSWFSHMREVKPSIYVTYNGDFFDWPFIQARALH---HGMRMHDEIG--FQHNETLGECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGFDPLEVNPEDMVRFAIEQPQTMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKGNIICPNKHKSEQEKVYNGKMLESETYIGGHVECLESGVFRSDIPTRFHLTPEAYQGLINNLDRDLKYAIEEEGKLELESVTNYDEVKEDIKLKLVNLRDTPIRDERPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICAACDFNRPGKTCMRELEWVWRGETYAAKRSEFMHLKNQIESEQFPSIADGGPLRYFRDLPKDEQQSKLKDRLKKYCQKVYKRVLEKPITDVRSASVCMRENPFYVDTVKSFRDRRYEYKGLNKVWKGKLGDAKAS--GNPIKIQEASDLVILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEQIGKPLELDTDGIWCCLPGSFPENFTFKTKNGKKLTISYPCVMLNVDVALNNTNDQYQTLVDPVSRTYATTSECSIEFEVDGPYKAMIIPASKEENVLLKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEIFDNFLHGATLEECYASVAAVANRWLDMLENQGIDVADSELLEYISESSTMSKSLEDYGDRKSCATTTARRLADFLGDEMVKDKGLSCRYIVARDPQGAPVSERAIPVAIFDAEPEVMRVYVRKWCKCSA--DVAIRSIVDWGYYRQRLNSAIQKIITIPAALQKVANPVPRVVHPDWLWKRIREKDDKYRQRNLKDMFGPKVA-QAEEPISEDGSEADLE---------------------DMVGTKLTGRKMPRPIIRVYDKDKQISNVQMT---NKSVIEDGIEMPPAR---------------QVRETTP-DKNDDYEAWLEHKKRKWKEARDKRKRSRPENA------------TGGALRNSLISKGG---------KAARSKPGVGAFFRNREAALTHSHWQILHLALGQRSGEFTAWVLAD-GDMYKVPLKVPRVFYLNTQATN--TEEYPGVRVTRTLPHGRPVFNLIEVVVDEEQFKLAGRKLAAHLADPEVEGVYETKMPLSLHALLQLGCVCKVDSKARNRTIR---------DGWSLNDLHMKTTTECSYL---MDDLPYIFLYHSWMENRGLYALY---------------------------------TPVISRILVVVVNPFNNREIAIAQLERQFRDAVRNQSQSNVDTSELTCKVEYVSSNADAGRLLQKTLIEYRDQHRGPTLAVVE-CPNLDTTKNTISALSELPCIQVSCNARDSNYQTLGWQPLAGRVAMQRCAASSIWLQERITLARYAHVPLGNFDSDWLLFTADTFYARALRDHMQVLWVSNDGIPDLGGVP-EEEPSFADEVQQPALIFPGAYRSISIELKVHHLAVNALLKSSQINELEGGALLGFNSESQDAVSLGVGQTNWDESV---------------------------------SCAPAFRILKQLVQGWLSDAVSSGNTFADVLLQHLYRWLCSPTSKMHDPALHRILHKIMQKVFALLLAELRKLRATIVFADFSRIIIATGKYNMAAAQGYCEYLLKTLKSRELFEWLELEPKRYWHALLFMDQYNYGGIQAKDVRTDLDA-----------------------------------------------------------------------------------------------------SDLSQD-------------------------PTQNGANEIISSWNIAEFLPKVTQDYFVVIVSEYIYIPWKHSQ----DQAALLA--------------------------AARGGDFASSTPSVSISTASDAEAQEVS-YLKEQIASYFTDKLLRVVRDVQRHINARRDEEDSEAQLSRQFPKLAGSHLVMTDPALEFIKQVCAVLALDNRVQHNVMVMRKNLLKLVHVREFSAEAAFEDPCRSFTLPNVICSYCNDCRDLDLCRDAALLEHD----WRCVVPSCGQPYDRAWIENALLQIVRQRERLYHLQDLVCVKCRQVKSSHLADQCQCAGAFKNTTSPAVFEKELQVFLNIAKYHGFELLEEVV 2237
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: K3WQI5_GLOUD (DNA polymerase epsilon catalytic subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQI5_GLOUD) HSP 1 Score: 1724 bits (4465), Expect = 0.000e+0 Identity = 1051/2616 (40.18%), Postives = 1449/2616 (55.39%), Query Frame = 1
Query: 295 AKAVLREKGDALDKRFGYD---------------------------RYSEGPPRLGWIFNMLPTSIPDASGN--EKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAYMHTEAQEQQP------------------DDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGV----DVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQA-NGEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEP-LTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNN---------CKRALTWKWRGDMTPASRTEYQSVKMQLTYENV--------------------DGK------PFVELDETDQATNVRARLKNYAHKVYKKTKVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKSGGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDARSQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRS-----GLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDM-QVVPITIPRVFYVNCLEDKGPAGSAMG---RRVARTLPN--GRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYL---------HPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSR---REGEQRPPFARIFERFTNNSDSSCTFKASSVGTH-----EEAWAAADASLSSYIRQRN---GPTLVLSQGLVQG-QELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDD------NDIWAEDL-----------ASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVLETVPAIKKYSGSGPDAFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLM------------------DEDEEER---WQCVQCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLV-AEESQQDFHKTIQLLRQLALFHSFGWLQETVEHI 7665
AK + +KGDALDK+FG+ +E P+LGW+ N+ SI D + E S +++YFLEQDG FK V Y+PY +V +E R Q+ I R+FE + V KEDLDMPNHLSGK ++KLSF++VSDL+ VK+AL P V+ N+ + +A+ AY +E+ D+ S L++ REYDVPY +R +IDL+IRVGAWY V D+ +MVDKAEP V A+DIE TK PLKFP+ + DQ++MISYM+D QG+LI++RE VSED+++FEYTPK +PGPF +FNE NEE +++RFF+HV + +P I VTYNGD+FDWPF+D R+K +G++M EIG+ L +GEYRGR HMDA WVKRDSYLPQGS GLKAVTKYKLGYDPVEVD EDM+ A + P +MA+YSVSDAVAT+YLY+ YVH+FVFSLCTIIP+G +DVLRKGSGTLCEALLMVEA+ G I+CPNKHS KF+ HL+ESETY+GGHVECLE+GVFR+D F LVPSA Q LIDN+DRDL F++ VE V D V+NYDEV+++I+ QLE LRD P R+E+P IYHLDVAAMYPNIIL+NRLQP AIVN+ CA+C +N E N C+R + W WRGD PA+R EY S+K QL YEN +G PF +L+E Q ++ R K+Y VYKKTK+T++E+R TVCMRENPFYVNTVRAFRDRRYDYK +TK KK +A+A + D + EA ++ V+DSLQLAHKCILNSFYGYVMRKGARW SMEMAGIVT+TG+ +I AR+LVEQIGRPLELDTDGIW ILP+SFPE F+F G ISYPCVMLNADV+ +TN QY +L DP T KY T ECSI FEVDGPY+ MVLP+STEEG+LLKKRYAVFN D SLAELKGFELKRRGEL++IK FQ QVFE FL G+ L ECY +V + AN+WLDV+ +KG +D++ELMELI++NK+MS LE+Y K TS TTA+RL++FLG MVKD+GL C+MI++ +P+G VTERA+PTAIFSAE AVK+H+L+KWLKDP ++DF IR++LDW YY R + I+KII++PAA Q V+NP PR++ PDW+RK VRE N ++Q + + + + TNA + + A T+ + S + P ++ D ++ EV F WL +K WK +RK +R AR+ A G G G+ G + KR +T A R+ G++ ++ + AL R FWQ+VE++ ++ G FT + IT M + + +PRVFY+ C E + + RRV R +P+ + P + E+ + E +FQ+N K++ L+ I+GVYEL + RA+ LG V +VV S A Q +EL DL+ + A PYL + + V LY + R ++GL ++ ED + EGD A+VW V+P S R E F ++ + S T ++ S TH ++A++ +++L+ + PT+V++Q + + LR ++ L P+ +P N ED FPAL W+ ++M+ R F ++ + L CARYAHLP+ N D A+ D + R+L N+H W S +S PD GG E + N + A+ S + G+Y +IC+ELE+ GLAV +++ ++Q++++EG G + ++ DN + AFR+L++LVTT + N AD LL FYRWVC+ SL ++ L +V F +L+AE RRLG+ +V+A F K+II T K D+K A+ Y +F++ TV S +LF L PKK++ L FLD +NYGGI + +N +E+ D + E +S+ + GD+ L+ I+SHWN+A YLP + + FL+LV F+ + E QLR + ++++ S+Q+ ++ + + E + +A + + LV+ ++K+L VP I+ Y+ D+FP G+ + +PALE +K + V L+P+V ++ +R+ L + V +FS + + +P +SF +PDVIC CNLCR +DLCRD +L D+D W C +C YD+ + E LVE V+ +SV+YQLQD+ C KC A M C CSG ++++ +T+++LR++A H F WL ETV+ +
Sbjct: 49 AKQFMLKKGDALDKKFGFHLLPELIEQEQQDASSGEMTTSASSSSANANERDPKLGWLLNLRACSILDPTEGKFEVSAVELYFLEQDGKAFKTRVIYQPYLFVRPEENR-SQEVIAYCLRKFEGLIAKAERVFKEDLDMPNHLSGKKAVYVKLSFYTVSDLVTVKQALAPIVEKNQAQQKARQAYELQGTREKVNEEDQLFGGDSLTLSRGGMDESESALLELREYDVPYSMRVAIDLNIRVGAWYHVNYDPAAPYAPSDIKRLPDMVDKAEPVVCAFDIETTKLPLKFPDAQFDQIYMISYMIDRQGYLIVNREFVSEDIQDFEYTPKKDYPGPFIVFNEENEEQLLKRFFEHVVDAQPHIFVTYNGDFFDWPFIDARSKF---HGINMADEIGISLDIRSGEYRGRSSVHMDAFCWVKRDSYLPQGSQGLKAVTKYKLGYDPVEVDAEDMLPLARDDPLKMASYSVSDAVATFYLYEKYVHLFVFSLCTIIPLGSEDVLRKGSGTLCEALLMVEAFEGGIICPNKHSSAHQEKFYKSHLVESETYVGGHVECLESGVFRADFLYDFNLVPSAFQHLIDNIDRDLRFSLVVEMDVALDRVTNYDEVKAKIVGQLEALRDRPTRKEKPLIYHLDVAAMYPNIILTNRLQPCAIVNEADCAACVYNTECGNSAVKDQDESCQRDMDWIWRGDFYPATRPEYFSIKTQLEYENFPVGPQGGTVAAGGPSKFGGDNGSNTTRMVPFGQLNEDRQEQLIKQRFKSYCSSVYKKTKITEQEKRAATVCMRENPFYVNTVRAFRDRRYDYKNLTKTWKKKQAQAEAQNDLLAKIEAQNKCLVYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVTHTGSNIITGARQLVEQIGRPLELDTDGIWAILPASFPETFSFKLNDGSSRSISYPCVMLNADVNAKFTNPQYHEL-DPETGKYKTHQECSILFEVDGPYKAMVLPASTEEGRLLKKRYAVFNFDHSLAELKGFELKRRGELQLIKAFQGQVFECFLDGENLEECYASVAKCANRWLDVIDTKGKSMDNEELMELITENKSMSGKLEEYEGQKSTSITTAKRLSEFLGESMVKDRGLTCKMIIAAKPYGEKVTERAIPTAIFSAEEAVKRHFLKKWLKDPNLQDFDIRTILDWEYYRGRFASTIQKIISLPAAFQNVKNPVPRIELPDWMRKQVREKNAKHQQGSLAKFVTSTK-----KDKTNANEDYIAQLIDLEDLALGKKPSDRPNKLLSLKQKRKRAAESGNSSAESTEELNEASSNTSAAEQDPIEDVD----------------MVPAAPVKLGEVA-------FSEWLKNRKTKWKTLLVKRKRQREERARNIA----------GGNSMIELGSGSIGPSAKRHQTMAASRTTGGGIGMENFVLNTASALHREFWQIVEVQ-QEQDGHFTCWVITTQSQMLHRITLKMPRVFYLACDEADSHIFTDLPLFTRRVLRIIPHLSSKLQPVV-EIMVSEQQFQQNHKELNQILNDPVIKGVYELQVSALTRAVCSLGCVVKVVNPH-------HSAANQE--YELSDLQFQSTAQVPYLVDLYQGTSGNNPAPLMRRVLLYFAQQKNRAILGLVVLKDAGEDSSSDSC--------EGD--------------AIVWYVDPVSNMKVRGSELLQYFGQLLQSSVEEGVESVTMQSCSFKTHVVKSVQDAFSGVNSALARLASNKQMTAKPTIVIAQTCIPSTKRLREKIQGLHSFPMAMLPWNEEDTLFPALTWRKLMGEKMIARCFEMAQYFQEVLDCARYAHLPVGNFTGDHSIAILDTLYSRILTKNKHLWWHSPSSVPDFGGKEQEQYQHLFSNSLLAKAQHGKANATHRTDTSAVVCDKGSYPDICVELELDGLAVNAILVAAQIQSIEGIGGAHQMEIDFDNDDASGANAAGAKSSVAEGEAE----------------EPCQEAFRLLRLLVTTLFKDFLTSRNKFADHLLQQFYRWVCSSNSLCYDPGLQAMVKRLMEKLFLQLLAEFRRLGSQIVYADFSKIIICTKKQDIKNAQTYLQFILQTVLSNELFQVLSFTPKKYFSNLFFLDSENYGGILL------KNVSEQ-----------------------------------------DADEDEEESD------------------------------------------QASGDAPLD-----------------------------------IISHWNIANYLPKGIDEYFLILVGQFIRRRAEF--QLR-ERAKLLSGASSQMNKADEQE-------------------------NEEVLDEAEKKLSPLAKYSQWLVASYFSEKLLRIVPEIQSYNMDR-DSFPVFAGSHLLMEHPALELVKFVSAVFQLEPSVEAQLGKMRRTLLKLLHVSEFSDDAQFVNPSLSFAVPDVICLCCNLCRSVDLCRDPQLFKGSSSRSNPDASDGDDAGDQDPNSAVSSWHCPRCFALYDKHAFEQRLVEMVEAQSVQYQLQDLYCQKCYLPAEHKMREYCTCSGTYGHLPGAKEELQETLRILRRIAQQHEFEWLLETVQRL 2419
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Match: B9SSU6_RICCO (DNA polymerase epsilon catalytic subunit n=3 Tax=Euphorbiaceae TaxID=3977 RepID=B9SSU6_RICCO) HSP 1 Score: 1722 bits (4459), Expect = 0.000e+0 Identity = 1038/2495 (41.60%), Postives = 1396/2495 (55.95%), Query Frame = 1
Query: 289 SAAKAVLREKGDALDKRFGYDRYSEGPPRLGWIFNMLPTSIPDASGNE-KSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDSIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVSDLMEVKKALMPTVQANKTRAEAQDAY--MHTEAQEQQPDDFLSVLVDAREYDVPYYVRCSIDLDIRVGAWYMVTPQEEGVDVAWQKEMVDKAEPKVLAYDIECTKAPLKFPNVEIDQVFMISYMVDGQGFLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDYFDWPFVDERAKARKGYGLDMESEIGVGLQAN-GEYRGRCVAHMDAIYWVKRDSYLPQGSHGLKAVTKYKLGYDPVEVDPEDMVRYASERPTEMAAYSVSDAVATYYLYQTYVHMFVFSLCTIIPMGPDDVLRKGSGTLCEALLMVEAYRGNIVCPNKHSEPLTKFHDGHLLESETYIGGHVECLETGVFRSDLPEKFRLVPSALQALIDNVDRDLTFAIEVESGVQRDTVSNYDEVRSEIIEQLEMLRDSPLREEEPFIYHLDVAAMYPNIILSNRLQPGAIVNKEMCASCDFNQESNNCKRALTWKWRGDMTPASRTEYQSVKMQLTYENVDG------KPFVELDETDQATNVRARLKNYAHKVYKKT---KVTKEEERVDTVCMRENPFYVNTVRAFRDRRYDYKIMTKKAKKAKAKAAEEGDAVGAKEAGDRAQVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTYTGALLIKQARELVEQIGRPLELDTDGIWCILPSSFPENFTFNTKS-GGKIRISYPCVMLNADVHENYTNHQYQDLQDPATRKYNTKSECSIFFEVDGPYRCMVLPSSTEEGKLLKKRYAVFNHDGSLAELKGFELKRRGELEVIKVFQSQVFEKFLRGDTLAECYEAVGEVANQWLDVLYSKGGDVDDDELMELISQNKTMSQTLEDYGTAKGTSQTTARRLADFLGAEMVKDKGLNCRMILSNRPHGAPVTERAVPTAIFSAEPAVKKHYLRKWLKDPGMEDFGIRSLLDWTYYLDRLGNCIRKIITIPAAMQKVENPCPRVKHPDWLRKIVREINDGYRQTKIDQLFKAVPAGAAPQQLTNAGASTSTEAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGRSILGARARVTKRITSKGSARFTTDGSPGKENDGAXXXXXXXXXXXXXXXXXXXXXEVEEVVPIQREDDFQGWLAQQKDGWKRHREQRKLKRRTDAR--SQAVTAFRGAGSGGARGGTAAGMGAAGAAEKRRRTAAMGRSGLQGYLTSAQDALLRGFWQVVEIRPSDKPGVFTVFAITGPGDMQVVPITIPRVFYVNCLEDKGPAGSAM-GRRVARTLPNGRASPFLHEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAILHLGSVARVVQGRAAALKGVKSGAGQAPGFELEDLELVTAAAHPYLHPSVATFKHVYLYHSSSGKRGMVGLFYVQGTNEDIEPEPTTVEGGGTEEGDGEGLGPGDRPVIAKAVVWMVNPFSRREGEQRPPFA-RIFERFT-------NNSDSSCTFKASSVGTHEEAWAAADASLSSYIRQRNGPTLVLSQGLVQGQELRRRLPALSELPVTHIPGNAEDERFPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHALWASETSRPDLGGTEGDDNDIWAEDLASPTILQPGAYRNICIELEIHGLAVGSVIASSQLEALEGSQGVTALAVNNDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVASAFRILKVLVTTWLDEVTHMGNVHADSLLVHFYRWVCARQSLLHNAALHRLVXXXXXXXFSRLIAELRRLGACVVFASFQKVIIATNKSDVKAARDYAKFVVSTVTSRDLFNTLQLEPKKFWEQLLFLDDQNYGGIQVQGSLFGENAAEEGQKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGELREGDSEGLQDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPKVQGDSDLEADXXXXXXXXXNGQESAQKLAGGDGAPPADRKAPPIVSHWNLAEYLPASVRQVFLVLVSTFLLKPHEKARQLRLDHERMVASLSNQLTQSSQPTGPASPEAGGGGAPASQGGVDTALAVQAAIRKEEANESQSMADFLKDLVSMTLTDKVL----ETVPAIKKYSGSGPD----AFPNKPGASRQLTNPALEFIKSLCHVLSLDPTVTDEVETLRKQALAEVGVRQFSAEGLYRDPCVSFVLPDVICSFCNLCRDLDLCRDSRLMDEDEEERWQCV--QCNHPYDRSSIELSLVEAVQRRSVRYQLQDMRCSKCGSVATRAMSLTCPCSGRLVAEESQQDFHKTIQLLRQLALFHSFGWLQETVEHIL 7668
S + ++R + LD + G+D ++EG RLGW+ +S D S +D+YF+ QDG FK+ ++PYFY KE+ + D +RRR+E ++ +V+KEDLD+ NHLSG +R+LK+SF +V LM+VKK L V+ N+ + + DAY + T +EQ+P DFL +VD REYDVPY+VR +ID DIR G WY V+ GV + + +++ +AE ++ A+DIE TK PLKFP+ + D + MISYM+DGQGFLII+RE V ED+E+ EYTPKP F G F + N NE +++++F H+ E++P I VTYNGDYFDWPF++ RA +G+ M E+G N GE R R H+D WVKRDSYLPQGSHGLKAVTK KLGYDP+EV+PEDMVR+A E+P MA+YSVSDAVATYYLY TYVH F+FSL TIIPM PD+VLRKGSGTLCE LLMV+AY+ N++CPNKH KF+ HLL+SETYIGGHVECLE+GVFRSDLP F+L PSA LI N+DRDL +AI VES + D+VSNYDEV++ I+E+L MLRD P+REE P IYHLDVAAMYPNIIL+NRLQP +IV E+C +CDFN+ C R L W WRG++ A++++Y +K Q+ E VDG KPF++L + +Q + ++ RLK Y K YK+ VT E R +CMRENPFYV+TVR+FRDRRY+YK + K K ++A G+ + +EA D ++DSLQLAHKCILNSFYGYVMRKGARW SMEMAG+VTYTGA +I+ AR LVE+IG+PLELDTDGIWC+LP SFPENFTF TK K+ ISYPCVMLN DV N TN QYQ L DP + Y T SECSI FEVDGPY+ M+LP+S EEG L+KKRYAVFN DG+LAELKGFE+KRRGEL++IKVFQ+++F+KFL G TL CY AV VAN+WLD+L ++G D+ D EL++ IS++ TMS++L DYG K + TTARRLADFLG MVKDKGL C+ I++ P G PV+ERAVP AIF + + K YLRKW K D GIRS++DW+YY RL + I+KIITIPAAMQKV NP PRV HPDWL K VRE D +RQ K+ +F+ ++ + T T+ R I+ A ++ + K + R D S + ++G I R D+QGWL +K WK E+RK +R + R S A F S R A R+G+ Y T+ + AL R WQ++++ P G F + + G M VPIT+PRVFY+N K P GRRV +TLP+GR S L EV +DE KF++ K++ L +EG+YE PL + AIL +G V +V K K Q + L +L++ T YL S++ F YLY S S R +V ++ P + V +VNP+ ++ P F R F ++ FK VG ++A ++ + +GPTL + + ++ +PAL P IP NA D ++ LGWQ AA+ +QR + +WL +R+ +RYAH+PL N D AD F R LR + LW S+ PDLGG +++ +A+++ P + PGAYR + +EL+IH LAV +++ SSQ+ +EG L + D + A A R+LK L+ L + G+V AD+LL H YRW+C+ QS LH+ ALHR++ F+ L+AE R+LGA ++FA+F KVII T K + AA+ Y ++ T+ +R+LF ++LEP +FW LLF+D NYGGI + ++ +S+G QES IVS WN+AEYLP +++ F+++VS F+ P E A++ + ASL Q S P+ + + AA E ES + ++LK +S TDK+L ETV +K + S D FP G + PALEFIK +C VL+LD V EV +RK L V VR+F+ E + DPC SFVLP+VICS+CN CRDLDLCRD+ L+ ++ W+C QC PYDR +E +L++ V++R Y LQD+ C +C V ++ C C+G +E +F +Q+ +A+ F LQE IL
Sbjct: 18 SKKQKLIRNAEEELDSKLGFDLFTEGDKRLGWLLTFASSSWEDEETRRVHSCVDLYFVSQDGSAFKSKFKFRPYFYAATKEKMEM-DVEAYLRRRYESQIADIEIVEKEDLDLKNHLSGLRKRYLKISFSTVQQLMDVKKDLSHVVERNRAKFDTADAYESLLTGRREQRPQDFLDCIVDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSSGVMLERRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMIDGQGFLIINRECVGEDIEDLEYTPKPEFEGCFKVTNVKNEVELLKQWFAHMQEVKPGIYVTYNGDYFDWPFLESRAAY---HGIKMSDEVGFSCDKNQGECRARSACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYKNHLLDSETYIGGHVECLESGVFRSDLPTHFKLDPSAYDQLIGNLDRDLQYAIIVESKMDLDSVSNYDEVKNAIMEKLVMLRDEPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPDKTCLRKLEWVWRGEIFMANKSDYYHLKKQIESEFVDGIDGQLSKPFLDLPKVEQQSKLKERLKKYCQKAYKRVIDKPVT--ELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKLWKGKLSEAKTSGNPIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVLPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPLNKTYATHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEGCYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGQQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYLRKWCKTS--TDIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDIFRL----SSKEDFVRKNNDTITDNCMMDEENVEDLEDFRNKSISTNGP-----RPIVHCYATNSEEHSVKATGRM--DSSHQQTDNGESVHELSSLVQQTASSGES----------IDRNVDYQGWLELKKRKWKDTLERRKRQRLGNLRNSSHANGDFEPLSS------------------VINRKKAQSRTGVGSYFTTHEIALTRCHWQIIQLFPGSHCGEFFAWVVV-EGIMLKVPITVPRVFYLN---SKAPITEKFPGRRVNKTLPHGRHSYNLVEVIIDEDKFKKESKKLAALLADPEVEGIYETKVPLEFNAILQIGCVCKVD-------KTAKKRNAQ-DRWSLNELQMKTTTECSYLEQSISFF---YLYQSISEGRAVVVVYL---------------------------------PFLRTVSVVVVNPYQNKD--LSPSFLERQFREACIALSVEPPTPRNAIVFKVDYVGHVKDAERILQGTIREVRDKHHGPTLAVIE-CPNDHLMKSGIPALDNFPCVRIPSNARDSQYQVLGWQQAAAKTAMQRSAASSQWLNERITLSRYAHVPLGNFELDWLIFTADVFISRALRDQQQLLWISDDGVPDLGGIS-EESSCFADEVHQPILTYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGG---ALLGFDQD----------------------MSSGSHICEQYGVDEATSSAPALRVLKQLIQRCLADAVTSGSVFADALLQHLYRWLCSPQSKLHDPALHRVLHKVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKFSLSAAKAYCDSLLKTLQTRELFEWIELEPLQFWHSLLFMDQYNYGGIPARAD----------------------------------------------------DISHSESQGAHSQR----------------------------------------------------------QESQVD----------------IVSSWNIAEYLPKTIQDHFVLIVSEFMFIPWEYAQK----QDANKASL--QDVSSCTPS----------------------ITISAA----ETYESH-IVEYLKGQISTYFTDKLLGIVRETVLHMKGINKSENDQPSSGFPQVAGNIHKRV-PALEFIKHVCAVLALDLNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQE----WRCAVPQCGQPYDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKEDVSEFRSKMQIFLNVAISQKFQLLQECTSWIL 2224 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.2.98 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig78.2.98 >prot_P-littoralis_Contig78.2.98 ID=prot_P-littoralis_Contig78.2.98|Name=mRNA_P-littoralis_Contig78.2.98|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2550bp MPPGRGRGRGDWKRNGEGGGGGGKGSRYQRQQGKGGAGGAKKSYADSSQAback to top mRNA from alignment at P-littoralis_Contig78:7296..60288+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig78.2.98 ID=mRNA_P-littoralis_Contig78.2.98|Name=mRNA_P-littoralis_Contig78.2.98|organism=Pylaiella littoralis U1_48|type=mRNA|length=52993bp|location=Sequence derived from alignment at P-littoralis_Contig78:7296..60288+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig78:7296..60288+ >mRNA_P-littoralis_Contig78.2.98 ID=mRNA_P-littoralis_Contig78.2.98|Name=mRNA_P-littoralis_Contig78.2.98|organism=Pylaiella littoralis U1_48|type=CDS|length=7650bp|location=Sequence derived from alignment at P-littoralis_Contig78:7296..60288+ (Pylaiella littoralis U1_48)back to top |