mRNA_P-littoralis_Contig78.110.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig78.110.1
Unique NamemRNA_P-littoralis_Contig78.110.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 7.270e-96
Identity = 145/255 (56.86%), Postives = 181/255 (70.98%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQDQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            VL  L IL RGN F D+  MS IS  T  +TF  F + FA+E Y +H+ LPT G+ Q +VM Q D LGF+GA GSTDVTHI W  CPY+ A+ YTGKEG+ T+A+Q  VDHT R+LA T GF GS ND++II YD A+TKIRE P+Y EKE+T+++  G P+Q KG Y +VDNGY+K   L       + +  + +SK LESVRKDVECFFGI+KGRFRILKL I +   EDI+N+FFTCC LHNMLH++D   E
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 412          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.600e-93
Identity = 145/252 (57.54%), Postives = 178/252 (70.63%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQDQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDG 756
            VL  L IL RGN F D+  MS IS  T+ STF  F K FA E Y ++V+LPT GED  +VM Q D +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF G+ ND+TII YD A+T+IR  PVY E++Y L+ + G+ F+ KG Y +VDNGY+K R L       + R  + +SK LES RKDVEC+FGILKGRFRI KL I F   E I+N+FFTCC LHNMLH+FD 
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.270e-92
Identity = 145/252 (57.54%), Postives = 178/252 (70.63%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQDQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDG 756
            VL  L IL RGN F D+  MS IS  T+ STF  F K FA E Y ++V+LPT GED  +VM Q D +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF G+ ND+TII YD A+T+IR  PVY E++Y L+ + G+ F+ KG Y +VDNGY+K R L       + R  + +SK LES RKDVEC+FGILKGRFRI KL I F   E I+N+FFTCC LHNMLH+FD 
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 2.560e-83
Identity = 128/256 (50.00%), Postives = 173/256 (67.58%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            VL  L ILGRGN F  + Q+S +S  T+Q+ F  F K FA+E Y +H++LP+    + D VM+Q D LGF+GA+GS DVTHI W+ CPY+ A+ YTGKEG  T+ +Q  V+H GR +A T+GF  S ND+T + +DA + KIR    Y EK + ++++ G     KG Y +VDNGY+K ++L       ++   I +SK LESVRKDVECFFGILKG FRI K+ + +   E I+N+FFTCC LHNMLH FDG+D+
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQ 354          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 1.160e-81
Identity = 137/284 (48.24%), Postives = 176/284 (61.97%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYK----------------------------EKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            VL  L ILGRGN F  + QMS +S  T+Q  F  F + FA+E Y + +HLPT    + D VM+Q D LGF GA+GS DVTHI W+ CPY+ A+ YTGKEGF TIA+Q  VDH GR +A T+GF GS ND+TI+ +D A+ KI     Y                             EK + ++++ G     KG Y +VDNGY+K ++L       ++   + +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTC  LHNMLH FDG+D+
Sbjct:   86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQ 369          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 2.620e-81
Identity = 131/254 (51.57%), Postives = 168/254 (66.14%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGL 759
            VL  L ILGRGN F  +  +S +S PT+Q  F  F + FA E Y +H+ LP+    + D+VM Q + LGF GA+GSTDVTHI W+ CPY+  + YTGKEG  T+ +Q  V+H GR+LA T+GF GS ND+TII  D A+ +IR    Y EK +T+  K G     KG Y IVDNGY+K R+L       ++   + +SK LESVRKDVECFFGILK RFRILKL + +Q  E ++ +FFTCC LHNMLH  DG+
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 6.280e-77
Identity = 116/213 (54.46%), Postives = 149/213 (69.95%), Query Frame = 1
Query:  130 YHDHVHLPTAGEDQ-DQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            Y +H+HLPT    + D V+ Q D LGF GA+GS DVTHI W+ CPY+ A+ YTGKEGF TI +Q  VDH GR +A T+GF GS ND+T + +DAA+ KIR    Y EK + ++++ G     KG Y +VDNGY+K ++L       ++   + +SK LESVRKDVECFFGILKGR RIL L + FQS E I+N+FFTCC LHNMLH FDG+D+
Sbjct:    2 YDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQ 214          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 1.590e-75
Identity = 125/256 (48.83%), Postives = 163/256 (63.67%), Query Frame = 1
Query:    1 VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            VL  L ILG+GN F  + QMS +S  T+Q  F  F +LFA+E Y +H+HLP     +   VM+Q D LG                 CPY+ A+ YTGK+ F TIA+Q  VDH  R +A T+GF GS ND+TI+ +DAA+ KIR    Y EK + L+++ G     KG Y + DNGY+K ++L       ++   + +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTCC LHNMLH FDG+D+
Sbjct:   21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQ 259          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5KZ66_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ66_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.450e-73
Identity = 114/170 (67.06%), Postives = 130/170 (76.47%), Query Frame = 1
Query:  256 CPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 765
            CPYS A+ YTGKEGF +IA+QAIVDHTGR+LA TKGF G+MND+TII YD A+  IR  PVY EK  TLFD++G PF+RKGNYSIVDNGYNK  +              +WSKA ESVRKDVECF GIL GRF+ILKLGI FQ    I+N+F TCCTLHNMLHAFDGL+E
Sbjct:   21 CPYSRARQYTGKEGFPSIAYQAIVDHTGRVLAVTKGFPGAMNDKTIIRYDTAVAMIRRDPVYTEKVNTLFDENGRPFERKGNYSIVDNGYNKTDMES------------KWSKAQESVRKDVECF-GILMGRFKILKLGIFFQDKNVIDNLFVTCCTLHNMLHAFDGLEE 177          
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 9.880e-70
Identity = 120/245 (48.98%), Postives = 153/245 (62.45%), Query Frame = 1
Query:   13 LHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHLPTAGEDQDQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHA 747
            L +LG+GN F D+ Q+S +SE   Q+ F  F +  A E + +H++LPT G   D+VM     LG  GA GSTDVTHI    CP++  + +TGKEGF TIA++  VDH GR LA T GF G  ND+T I YD+ + KIR    Y E+EY L   +G    R+G + IVDNGY +            +     +S+ LESVRKDVECFFGILKGRFRILKL + +   E I+N+FFTCC LHNMLH 
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPT-GTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE7.270e-9656.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.600e-9357.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.270e-9257.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE2.560e-8350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.160e-8148.24DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE2.620e-8151.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI6.280e-7754.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUX7_9PHAE1.590e-7548.83DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZ66_9PHAE1.450e-7367.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KSI7_9PHAE9.880e-7048.98DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:438549..440749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size765
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.03e-77
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size765
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791606.2894626-CDS-P-littoralis_Contig78:438548..4387251680791606.2894626-CDS-P-littoralis_Contig78:438548..438725Pylaiella littoralis U1_48CDSP-littoralis_Contig78 438549..438725 +
1680791606.3201401-CDS-P-littoralis_Contig78:439470..4398721680791606.3201401-CDS-P-littoralis_Contig78:439470..439872Pylaiella littoralis U1_48CDSP-littoralis_Contig78 439471..439872 +
1680791606.3479333-CDS-P-littoralis_Contig78:440563..4407491680791606.3479333-CDS-P-littoralis_Contig78:440563..440749Pylaiella littoralis U1_48CDSP-littoralis_Contig78 440564..440749 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.110.1prot_P-littoralis_Contig78.110.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig78 438549..440749 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig78.110.1

>prot_P-littoralis_Contig78.110.1 ID=prot_P-littoralis_Contig78.110.1|Name=mRNA_P-littoralis_Contig78.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp
VLPSLHILGRGNFFKDMTQMSHISEPTIQSTFRMFNKLFAQEFYHDHVHL
PTAGEDQDQVMRQSDLLGFNGAIGSTDVTHIKWAACPYSWAKHYTGKEGF
ATIAFQAIVDHTGRLLAATKGFGGSMNDETIITYDAAITKIREGPVYKEK
EYTLFDKHGEPFQRKGNYSIVDNGYNKVRLLCGSVSRGVARVLIRWSKAL
ESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAF
DGLDE
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mRNA from alignment at P-littoralis_Contig78:438549..440749+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig78.110.1 ID=mRNA_P-littoralis_Contig78.110.1|Name=mRNA_P-littoralis_Contig78.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2201bp|location=Sequence derived from alignment at P-littoralis_Contig78:438549..440749+ (Pylaiella littoralis U1_48)
GTCCTGCCATCGTTGCACATACTTGGGAGGGGCAACTTCTTCAAGGATAT GACCCAGATGTCTCACATTAGCGAGCCGACGATACAAAGCACCTTTCGTA TGTTCAACAAGCTTTTCGCGCAAGAGTTCTACCACGACCACGTGCATCTG CCCACCGCCGGCGAGGACCAAGACCAGGTGACTGGTCTCATCGTACAAGT ATTGTGAACCCATGTTTTTGTCCCGACACACGTATCGTAGACCTTTGTAT AATGCAAAGTATGTTCGTTTACAACTTTCCGTGCAATGTTGTGAAGTGGC GCATCTTGTCTTATTTTTTTCTCGCCGTTAAAATAAGGTAAATCTACCTA CTACAACCTCAGTGCCTCCTCATGATGGATTGCATTCTATCTCCGACCGC CAAGGCATCGTTGTCCGTTTGCGTTTTGGTCGGACCATGCACGGGAAGTC GATACCGGATTAAGCTGGCAGGGTGCTCGTATCCGCGATGTGTCGCATTT AGTCTGCCAAAAAGAACAACGATCAACACCTTCATTCGAGTCAACATTAT CCACTGCCTCAAGTTAAGCACGTGCATTGCGGTCTTGGTAGCGCATTGGT CTGAGTAAACAACAACGCACCAAACAAAAAGCGGAACGGCATCTATGTTC AGTTAAGTTAGGCACGTTGTAGCTCCCGGGTGTTGTGTGTGTTTGAAGTG CTGGATATGACATTGCTTCTATATCGTGTACCAGGTATGTAGGTTGGTTT GTAGCCTCGACGCTCTCTCCTTTGGACGCATGAACCCCAAGCCTTTGCAC GCCGTACTTCTTCCAGCACAGCGGTGGGCAGGCATAGTCAATCAACGGCG TGTTCTCGATATTCGAAAACGCCCGACGTCATATCTCACGGTGCGACCCC ACCGTTTCTTGCCAAATATCAGGTGATGAGGCAATCCGACCTACTGGGAT TTAATGGAGCAATCGGTTCGACTGATGTCACCCACATCAAATGGGCGGCT TGCCCGTATTCTTGGGCGAAGCACTACACGGGAAAGGAAGGTTTCGCGAC CATCGCCTTCCAGGCGATCGTGGATCACACTGGGCGTCTCCTGGCCGCGA CAAAGGGCTTTGGTGGCTCGATGAACGACGAGACCATCATCACGTACGAC GCGGCCATCACTAAAATCCGCGAAGGCCCCGTCTACAAGGAGAAGGAGTA CACTCTCTTCGACAAGCATGGTGAGCCGTTCCAGCGAAAGGGCAACTACA GCATCGTCGACAATGGGTACAACAAGGTGAGATTGCTCTGCGGCTCGGTT TCTCGAGGTGTAGCCCGTGTGTTGGTGCCTCGTAGCTCTCCTATGGATAG GCTTCAACGCTGTGCTTGTACGTCATGATGGAGAATTAAGACGAAACTAG CGTTTGTCCTGCTCGTACGTGGAGAGTCTGTATTCTCCTAGCAAGAACCG TTGACAAAAAGCTAGTAACCGATCGCCCTTGTCTGGTGAATATCTTTGTG GGTGGACTTGTTGCACCAAGGTTTCCAAAATGGTCAAAATGACGAGGCGC TCACGTCCCCCCCCCTCCGAATCTTAACGAACTCGAAGTAGTTTTACCCC GAATGTGTCGGGCGACCAGACAATAACCAAATTCATACCACCGCACTGTC TGAATGGGGTGTTGGCGGGGCTCGATCTGTACGAATGCATCCGCCAAACA ACATCGCACATGCTGTCCCGCGGGTTTGCTGTATGTCATGTTTTTTTATG GTGTATTTTCGAACAACTGCTGCCCGCTGTTGTCCGCTGTTGAGTGTCCA CTGTGAAGCGCACTCGGACGTCCAAGGAGCGTGTGAAGTGTTCAGCGTCC CGCTGATTAGAACACGTTTTTCACACCGAAGCTCGAAGGTTGCCCCCTCC TCATCCCACGTGCTGTCTGCCTTTCGTTTCCGTCCGTCTGTCACGCCTCG CCTCCCTTCCTACATAAGTGGGAGATCCTCATCCCCCTAGCAAGTTCGCA GGTACCGATATCGAGATCAGGTGGAGCAAAGCGCTGGAGAGCGTTCGCAA GGACGTCGAGTGTTTTTTCGGCATCTTGAAGGGCCGTTTTAGAATTTTGA AACTAGGAATTCTTTTCCAAAGCTTGGAAGACATCAACAACATGTTCTTT ACGTGTTGTACGTTGCACAACATGTTGCATGCGTTCGATGGGCTTGATGA A
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Coding sequence (CDS) from alignment at P-littoralis_Contig78:438549..440749+

>mRNA_P-littoralis_Contig78.110.1 ID=mRNA_P-littoralis_Contig78.110.1|Name=mRNA_P-littoralis_Contig78.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=765bp|location=Sequence derived from alignment at P-littoralis_Contig78:438549..440749+ (Pylaiella littoralis U1_48)
GTCCTGCCATCGTTGCACATACTTGGGAGGGGCAACTTCTTCAAGGATAT
GACCCAGATGTCTCACATTAGCGAGCCGACGATACAAAGCACCTTTCGTA
TGTTCAACAAGCTTTTCGCGCAAGAGTTCTACCACGACCACGTGCATCTG
CCCACCGCCGGCGAGGACCAAGACCAGGTGATGAGGCAATCCGACCTACT
GGGATTTAATGGAGCAATCGGTTCGACTGATGTCACCCACATCAAATGGG
CGGCTTGCCCGTATTCTTGGGCGAAGCACTACACGGGAAAGGAAGGTTTC
GCGACCATCGCCTTCCAGGCGATCGTGGATCACACTGGGCGTCTCCTGGC
CGCGACAAAGGGCTTTGGTGGCTCGATGAACGACGAGACCATCATCACGT
ACGACGCGGCCATCACTAAAATCCGCGAAGGCCCCGTCTACAAGGAGAAG
GAGTACACTCTCTTCGACAAGCATGGTGAGCCGTTCCAGCGAAAGGGCAA
CTACAGCATCGTCGACAATGGGTACAACAAGGTGAGATTGCTCTGCGGCT
CGGTTTCTCGAGGTGTAGCCCGTGTGTTGATCAGGTGGAGCAAAGCGCTG
GAGAGCGTTCGCAAGGACGTCGAGTGTTTTTTCGGCATCTTGAAGGGCCG
TTTTAGAATTTTGAAACTAGGAATTCTTTTCCAAAGCTTGGAAGACATCA
ACAACATGTTCTTTACGTGTTGTACGTTGCACAACATGTTGCATGCGTTC
GATGGGCTTGATGAA
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