mRNA_P-littoralis_Contig77.68.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.68.1
Unique NamemRNA_P-littoralis_Contig77.68.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: D7G705_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G705_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.420e-90
Identity = 142/220 (64.55%), Postives = 163/220 (74.09%), Query Frame = 1
Query:  196 MSDAVWTARVKLRAIMKEDMPQYNE----------FWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYRA 825
            MSD VWTARVKLRA MK +MP+Y+E          FW KHAQ FS WW  L A E R  LSMPV+EV   FQG YDLRGAY VVMSAVN+Q+RNFDKTGIKGD RTAAELSFEE LKV RGAY+G  FV DT A  FFD+C+QVGGPRLLPSKPR  G   S +     +S    +++ V+  E+ + +TEGQSFRADRRL+RLVVFRYMFDKAIRK++A
Sbjct:    1 MSDEVWTARVKLRAAMKGEMPRYHEVLAGMIPVHEFWGKHAQKFSEWWTRLPAEEARRTLSMPVDEVPVIFQGTYDLRGAYFVVMSAVNDQLRNFDKTGIKGDGRTAAELSFEEGLKVHRGAYLGGAFVKDTQADHFFDMCRQVGGPRLLPSKPRDHGTATSSKKEVLTSSAADSANERVDFAEIGSAETEGQSFRADRRLIRLVVFRYMFDKAIRKFQA 220          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A7S3LHQ5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LHQ5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 8.520e-61
Identity = 109/273 (39.93%), Postives = 145/273 (53.11%), Query Frame = 1
Query:   22 GQFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGR---GADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            G+F D W+VDR +FE ++ G CSCCG      E    M  CSD+ETDDG+ E KSPWP  M D VW  RVK R IMK+++ +Y +  E H Q F  WW       R+    MP  E+   F   ++ + AY VV+ +V EQV  F+ TG K D  T  E  FEESL+V RGA+V     + +      FF +  Q+GG  LLP +PR +    A   + + GP                     +  QSFR DRRLVRL++FRY  D+A +K+
Sbjct:    4 GRFLDTWVVDRVMFEFVNQGGCSCCGFQHGGMEMSDFMALCSDVETDDGKTEKKSPWPKFMQDEVWADRVKFRRIMKKEITKYKKLSEAHGQDFVQWWLDADEKTRKSCFMMPKEELKVQFNTVFEFKTAYQVVLCSVLEQVEKFEATGYKLDGATDCENYFEESLRVYRGAWVVTEDYYTTLEGCDNFFGMLLQLGGDHLLPKRPRDKRAVAARAKVLAEGPTDDNSXXXXXXXXXXXXXXASSSAQSFRGDRRLVRLMIFRYYADQAWKKF 276          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A5D6YQ28_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQ28_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.210e-55
Identity = 100/269 (37.17%), Postives = 152/269 (56.51%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            ++ D W+VDR +FE+++ G CSCCG+T    +       CSD ETDD R+E  SPWP+ + + + T R +LR  MK+DM +Y  F + H +GF+ WWK L  + +  +  +   +V A F+ +  ++G+Y +V+ AV +QV++F  TG + D R   E+ FE++L+  RG +V   +   S   A  FF++   +GGP+LLP                 V S   PS +     E   ++   QSFR+DRRLVRLV+FR   D AIRK+
Sbjct:    3 KYEDCWVVDRTMFEYVNQGGCSCCGVTHAIMDLATFADKCSDWETDDERKEQMSPWPSFIHEEILTERARLRVAMKDDMKRYKAFADAHMEGFAEWWKRLDESGKLRVFQLSDEDVLAFFRLQARVKGSYDIVLCAVLKQVKHFQDTGYR-DGRIGPEIFFEKALQYRRGVFVVANEYMASPEGAANFFEMLTVLGGPKLLP-----------------VRSTRDPSEKSEAEEEQAKSEANVQSFRSDRRLVRLVIFRKFADIAIRKF 253          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A225VF63_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A225VF63_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.520e-54
Identity = 96/268 (35.82%), Postives = 151/268 (56.34%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVS-DTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            ++ D W+VDR +FE+++ G CSCCG+T            CSD E+DD ++E  SPWP  + + + T R +LR  MK DM +Y +F + H +GF  WW  L    +  I  +PV+EV + F+ +  ++G+Y +++ A+ EQ+R+F++TG   D R AAEL FE++L       +   ++  +     FF++ K +GGP+LLP                 V +   P+ +     E   +++  QSFR+DRRLVRLV+FR   D A+RKY
Sbjct:    3 KYEDTWVVDRTMFEYVNQGGCSCCGVTHTIMNFADFASKCSDWESDDEKKEHYSPWPMFIHEEILTERARLRMAMKADMNKYKDFVDTHMKGFMAWWSRLGENAKTRIFQLPVDEVLSYFRVQTKVKGSYEILLCAILEQIRHFNETGYS-DGRVAAELFFEKNLHQRESFVLDSQYIGMEAGDMNFFEMMKILGGPKLLP-----------------VRTTRNPNEKSEAEAEQAKSESNVQSFRSDRRLVRLVMFRIFADMAMRKY 252          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A8K1CD15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD15_PYTOL)

HSP 1 Score: 184 bits (468), Expect = 9.390e-54
Identity = 102/269 (37.92%), Postives = 152/269 (56.51%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITRQ--ERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            +F D W+VDR +FE+++ G CSCCG+T Q  +   L   CSD E+DD ++E  SPWP  + + + T R +LR +MKEDM QY  F + H +GFS WW+ L  + +  +  +P  +V   F+    ++G+Y +V+ AV EQ+R+F++TG K D R   E   E+ L+  R  +V   K   S   A  F ++ + +GGP+LLP         L L  +        P+  +    EV  +    QSFR+DRRL+RLV+FR   D A+RKY
Sbjct:    3 KFEDCWVVDRTMFEYVNQGGCSCCGVTHQIMDVAQLADRCSDWESDDEKKEQFSPWPTFIHEEILTERARLRVVMKEDMRQYKAFIDTHMKGFSAWWQQLDESTKNRVFQVPDEDVMDYFKSHAKVKGSYEIVLCAVMEQLRHFNETGYK-DGRIPPECCAEQYLQNRRSCFVMDPKYVASADGAVNFCEIMQILGGPKLLP---------LRLTRD--------PAQNNQAEQEVAQSVANVQSFRSDRRLLRLVIFRKFADVAMRKY 253          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A2R5GD26_9STRA (Histone-lysine N-methyltransferase setd3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GD26_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.030e-53
Identity = 113/290 (38.97%), Postives = 150/290 (51.72%), Query Frame = 1
Query:   22 GQFTDAWIVDRALFEHLSGGACSCCGITRQERGA--LMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAY-VGKMFVS-DTHAKQFFDLCKQVGGPRLLPSKP-----RGRGADLSLESNGPVASVHRPSSQDVNNVEVD--------------ATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYR 822
            G+F D W+VDR +FE ++ G C+CCG T    G    M  CSD+ETDDGR E +SPWP  M + VW  RVK R ++KE M  Y E +E+H   F TWW  L   ER+    MP  E+   F   YD + AY VV+ +V EQV NF  TG K D  T  E+  E  L   RGA+ V   +V+ D     FF +  Q+GG  LLP +P     +   A  S+E  G      + S+ D                     +T +  QSFR DRRLVR+++FRY  D A  +++
Sbjct:  357 GRFLDTWVVDRVMFEFVNQGGCNCCGFTHGGMGMQDFMALCSDVETDDGRTERRSPWPPFMQNEVWADRVKFRRMLKETMGIYRERFEQHGADFVTWWLELDPKERKRCFMMPKEELRVQFNSTYDFQTAYQVVLCSVLEQVENFPSTGYKNDGGTDCEVFLETHLGTKRGAWTVADAYVNTDEGCDMFFGMLMQLGGDHLLPKRPTESRKQAAQAKRSVEEAGKDLD-QKVSADDXXXXXXXXXXXXXXXXADRKKSTDSGTQSFRGDRRLVRVLIFRYFADMAWTRFK 645          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: K3W812_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W812_GLOUD)

HSP 1 Score: 183 bits (464), Expect = 3.240e-53
Identity = 98/269 (36.43%), Postives = 149/269 (55.39%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            ++ D W+VDR +FE+++ G CSCCG+T    +  +  + CSD ETDD ++E  SPWP+ + + + T R +LR  MK+DM  Y  F + H  GF+ WWK L    +  +  M   EV   F+    ++G+Y +V+ A+ +QV++F +TG + D R +AE+ FE+ L+  RG ++   K   S   A  F  + + +GGP+LLP                 V     P+ +     E   ++   QSFR+DRRLVRLV+FR   D AIRKY
Sbjct:    3 KYEDCWVVDRTMFEYVNQGGCSCCGVTHAIMDLASFAEKCSDWETDDEKKEKFSPWPSFIHEEILTERARLRVAMKDDMKSYKHFIDTHLPGFAEWWKRLDETGKARVFQMTDEEVMDFFRIHARVKGSYDIVLCAIMKQVKHFAETGYR-DGRISAEMYFEQFLQNRRGVFLMDSKYINSPEGAANFIQMLQVLGGPKLLP-----------------VRQTRDPNEKTEAEAEQAKSEANVQSFRSDRRLVRLVIFRKFADIAIRKY 253          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A2D4C6E1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6E1_PYTIN)

HSP 1 Score: 179 bits (453), Expect = 9.110e-52
Identity = 96/271 (35.42%), Postives = 152/271 (56.09%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITRQ--ERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAY-VGKMFVSDTHAK-QFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEG--QSFRADRRLVRLVVFRYMFDKAIRKY 819
            +F D W+VDR +FE+++ G CSCCG+T Q  +  + ++ CSD E+D+ + E  SPWP  + + + T R +LR +MK+D+ +Y  F   H +GF  WW+ L A  +  +  +P +++   F     ++G+Y +V+ AV EQ+R+F +TG K D R  AE  FE  L+     + +   +++ T A   FF++ + +GGPRLLP +                      S++D N  E +  K+    QSFR+DRRLVRL + R   D AIR+Y
Sbjct:    3 RFDDCWVVDRTMFEYVNQGGCSCCGVTHQIMDVASFVERCSDWESDEEKNETLSPWPVFIHEEILTERARLRIVMKDDIERYKSFLATHMKGFMAWWQQLDAGGKTRVFQVPDDDLLDYFHTHVKVKGSYEIVLCAVLEQLRHFKETGYK-DGRVNAECYFERFLQNRASCFTMDPSYINSTEANANFFEMLRLLGGPRLLPIR-------------------QTQSAEDNNQAEQEVIKSVSNVQSFRSDRRLVRLAIVRKFADIAIRRY 253          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: D0NRX8_PHYIT (Uncharacterized protein n=49 Tax=Phytophthora TaxID=4783 RepID=D0NRX8_PHYIT)

HSP 1 Score: 174 bits (442), Expect = 4.840e-50
Identity = 96/269 (35.69%), Postives = 148/269 (55.02%), Query Frame = 1
Query:   25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSA-AERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVSDTHA-KQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
            ++ D W+VDR +FE+++ G CSCCG+T            CSD ETDD  +E  SPWP  + + + T R +LR  MK DM +Y +F + H +GF  WW  L   A+ R++ +    + +  F+ +  ++G+Y +++ A+ EQ+R+F +TG   D R AAEL FE++L       +   ++++    K FF++ K +GGP+LLP                 V +   P+       E   ++   QSFR+DRRLVRLV+FR   D AIRKY
Sbjct:    3 KYEDTWVVDRTMFEYVNQGGCSCCGVTHTIMNLAEFASKCSDWETDDENKEQFSPWPTFIHEEILTERARLRVAMKADMNKYKDFVDTHMKGFMDWWSRLGENAKARQVRT--TYDFALYFRVQTKVKGSYEILLCAILEQIRHFQETGYT-DGRVAAELFFEKNLHQRESFVLDSQYIANEAGDKNFFEMLKILGGPKLLP-----------------VRTARNPNENTEAEAEQAKSENNVQSFRSDRRLVRLVLFRIFADMAIRKY 251          
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A1V9YNR0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNR0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.800e-46
Identity = 92/269 (34.20%), Postives = 130/269 (48.33%), Query Frame = 1
Query:   28 FTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYR 822
            F DAW+VD+ +FE++S G CSCCG+T       AL   CSD ETDD  +E  SPWP  + + V T R  +R  +K  MP Y  FW  +   FS WW   +   +  +  +   +V +      D+ G YS+V++ V EQ++ FD+TG   D R  AEL+FE  L+ ++GA+        S      F  L + +GGPRLLPS                                         SFR+DRR+VR+V+ R   D  IRK++
Sbjct:    3 FQDAWVVDKTMFEYVSQGGCSCCGLTTAMMNFAALADLCSDWETDDEERESFSPWPTFIHEDVQTQRALIRLRLKAHMPAYTTFWADYGDAFSQWWDAQAPTTKYRLFQLQDADVKSYVHTHGDVHGPYSIVLATVTEQIKQFDQTGYS-DGRVPAELAFERHLRFEKGAFTLDAAYLASTDPTSNFCALVQHLGGPRLLPS----------------------------------------HSFRSDRRVVRIVLARIFADSVIRKFK 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G705_ECTSI1.420e-9064.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3LHQ5_9STRA8.520e-6139.93Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A5D6YQ28_9STRA2.210e-5537.17Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225VF63_9STRA3.520e-5435.82Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A8K1CD15_PYTOL9.390e-5437.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2R5GD26_9STRA1.030e-5338.97Histone-lysine N-methyltransferase setd3 n=1 Tax=H... [more]
K3W812_GLOUD3.240e-5336.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4C6E1_PYTIN9.110e-5235.42Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
D0NRX8_PHYIT4.840e-5035.69Uncharacterized protein n=49 Tax=Phytophthora TaxI... [more]
A0A1V9YNR0_9STRA1.800e-4634.20Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:246470..250059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G705
Model size825
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.33e-91
EggNOG OGs2B923@1|root,2S0T1@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_011560.1
Cds size825
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.68.1prot_P-littoralis_Contig77.68.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 246470..250059 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791589.3951893-CDS-P-littoralis_Contig77:246469..2465171680791589.3951893-CDS-P-littoralis_Contig77:246469..246517Pylaiella littoralis U1_48CDSP-littoralis_Contig77 246470..246517 -
1680791589.407919-CDS-P-littoralis_Contig77:246908..2469411680791589.407919-CDS-P-littoralis_Contig77:246908..246941Pylaiella littoralis U1_48CDSP-littoralis_Contig77 246909..246941 -
1680791589.417954-CDS-P-littoralis_Contig77:247312..2475401680791589.417954-CDS-P-littoralis_Contig77:247312..247540Pylaiella littoralis U1_48CDSP-littoralis_Contig77 247313..247540 -
1680791589.4355533-CDS-P-littoralis_Contig77:247833..2479351680791589.4355533-CDS-P-littoralis_Contig77:247833..247935Pylaiella littoralis U1_48CDSP-littoralis_Contig77 247834..247935 -
1680791589.4469044-CDS-P-littoralis_Contig77:248343..2484871680791589.4469044-CDS-P-littoralis_Contig77:248343..248487Pylaiella littoralis U1_48CDSP-littoralis_Contig77 248344..248487 -
1680791589.461555-CDS-P-littoralis_Contig77:249127..2492491680791589.461555-CDS-P-littoralis_Contig77:249127..249249Pylaiella littoralis U1_48CDSP-littoralis_Contig77 249128..249249 -
1680791589.4798124-CDS-P-littoralis_Contig77:249681..2497511680791589.4798124-CDS-P-littoralis_Contig77:249681..249751Pylaiella littoralis U1_48CDSP-littoralis_Contig77 249682..249751 -
1680791589.4906924-CDS-P-littoralis_Contig77:249981..2500591680791589.4906924-CDS-P-littoralis_Contig77:249981..250059Pylaiella littoralis U1_48CDSP-littoralis_Contig77 249982..250059 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.68.1

>prot_P-littoralis_Contig77.68.1 ID=prot_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=275bp
MSSFFVDGQFTDAWIVDRALFEHLSGGACSCCGITRQERGALMQGCSDIE
TDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFS
TWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNF
DKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVSDTHAKQFFDLCKQVG
GPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSF
RADRRLVRLVVFRYMFDKAIRKYRA
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mRNA from alignment at P-littoralis_Contig77:246470..250059-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.68.1 ID=mRNA_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3590bp|location=Sequence derived from alignment at P-littoralis_Contig77:246470..250059- (Pylaiella littoralis U1_48)
ATGTCTTCATTTTTCGTCGATGGACAATTTACGGATGCATGGATTGTCGA CCGTGCGTTGTTCGAGCATCTCAGCGGGGTAGGTGCCGGTACACACATGT TGAGCATAACAGCGCATGGAGTGTTGAGGGGAAGCAATATGCTGTCTTCT CATGCTAAATCAGAGGTAATACTACTGTGCAACGACCATACACGTATGAT GTGTATCAGGACTGCTGTGTACACGGTACATGACGGAACAGCCTTGACGT CCGTCCGGGACGAGAACGCGATCCTACTTTTTTGTCCTATCCTTGCTCCG TCGGCCAGGGGGCGTGCTCCTGCTGTGGGATTACTCGCCAAGAGAGAGGA GCGCTCATGCAGGGCTGCTCCGATATCGGTGAAAAACTCATCAAACGAGG GCATGATTGAGCGTTTCCACGATGATCTGAACCTGTCGTCCTGTACTACT GTAGAAGTGCACGGACCTTATAGTCTAGCTGTTTGTAACAATGTGTAGGC TCACCCGAAAAGTACAGTCAACCTGATATCGTAACTACTGCTGTATGCTG TAGTCTGGACCCATCTGTGTGCGTGTTTGTTCCCCAAATACCTTGACACC ACCATCTCGTTTTACAGTAATAGTACCGCACGTCAGGGCTTACCTGTCAT CACTCAATGCACAACAGTCCGAACCTATGGCAGTACTCTGGTACTTTCTG GGGTCAATTTTGCAAGCTATCATTATGTCCTGCTAAAAAAAGGTGTGATT TTACATGACGCTAATGCGCACTCGATCCGTACCCACACCTCACCTGATGC AAAACAATAGAGACCGACGACGGACGGCAGGAGGGCAAGTCGCCTTGGCC TGCAGCTATGTCTGATGCAGTATGGACTGCTCGAGTCAAACTTAGGGCGA TCATGAAGGAGGACATGCCCCAGTATAACGAGGTACGCTTGCAATGATTT ACCATGATGCTGATGCTGTATATCATACCCGGAGTACGTCTGTATCTACT TCAAGTACATATCTTTTGATATCAGATCTGGACTCAACAGCAGTGAGACT ATCATAAAATTTTGAAACTGCTGTGTCCATTAGCTCCCGTCAATACCTCT CGATGGGCAGATAACGAATTTTGTGTGAGATCCTTGGATAAAAATGTTTG GTGTTGATGCTGAACATTTCGAAGGTGTGTGTGACCCACTGCAATGTACT TCGTATATTATACTCCGGAGTACTCCGGAGTATTATTTTCTGGTACAATG TATGTACATTATATGTACGAGCATACCTGTGTATTCTGCCTCAGTACGAA GTACTTCGTAGTACATGAAAAAAAGTAAAACGAACAAGCAAGCCGATGGT ACTCCGTATATGTGCGTGTTTTCCCCCACAAATCATGATGCGCGTATGTG GTATGGTTTTGCTGTCCCCGTCCGGTAAAACTTCGTTCAAATGTCGAGCA AATGTACAGATTCATACAACAAGGGGTGACATAATCGAAAATGTGAATTT GAATCAGACCAGATGTCTGATACCGCCGGAGGTCAATTTATCACTTGCTT TGTCGTCCTTTTTTCCTGGCAGTTCTGGGAGAAGCATGCTCAGGGATTCT CTACTTGGTGGAAGGGGCTATCGGCAGCAGAGAGGCGGGAAATTTTGAGC ATGCCAGTAAATGAGGTATCAGCTGCTTTCCAGGGAAAGTACGACCTTCG GGGAGCGTACTCGGTGGTAAGTGCAACACATTTGCGCGAAATGTACCCTC AACAGCGTTGTTACGTCGGCACGACTTAAAAACACACCGTGCAGTTTGCT TCGGTTGCGTACATATCGTGGTAGTTATATAACTTGTATTTCGAAGTAAA AAATTGACATCACATAGCCAACGGCACTCCCTTGCCGGGTCGCCCTTTTA TAGAAGCAACTGCCTCGGGAAGTTTGCGAGGGGCTTTCTCCAGATGAGTT ATTTTTCGGCGTGTTTACGACAAACTCTTTCGTATTCTGCCAACCAAAAT TAAAATGTTTTCCAAAACAAAAACAGCAGTGCGTGCATACCGGTATGTTA TAATCTTCTTTGCATGCTGGGTGTTGTCTGTGCCCCTCCTCGGCGTCCGT CTCTGCTCCTATTCCTCTGCCCAGGTAATGTCTGCAGTGAACGAGCAGGT CCGAAATTTCGACAAGACAGGCATCAAAGGTGACAGTCGGACCGCCGCCG AGCTTTCTTTCGAGGAGTCTCTCAAAGTGAGCTCCGAACATCACACCGCA ACTCGCGCTGGAGTACACTAATAAATTCGGCAGCGCGAAGGTGTAAAACG CTGTATGTATTCGATGCTTTTTACAGAGCCCGATCGTTATTATATGGTGG ATGAAAGAATAAGGAGCAGATCTGGAATGATGGCACATGCGGTACTTCGT CGTGAGCCTTTTCCTTCAAAGGAACAGACACGCCTTTCGTGCGATAGCGT ATGCATGGTGATGGCAATCTCTCTCACTGCACAACGATTTTTTTTGTTGA ATGGCCCGCCGGCCCGCAGGTCGACCGTGGCGCCTACGTCGGAAAAATGT TCGTGAGCGACACCCACGCCAAGCAATTTTTCGACTTGTGTAAGCAAGTT GGCGGGCCGAGGTTGCTACCATCCAAGCCTCGAGGGAGAGGCGCCGATCT CTCGTTGGAGAGCAACGGACCGGTTGCTTCGGTCCACAGACCTTCCAGCC AAGACGTTAACAACGTGGAAGTCGATGCGACCAAAACGGAGGGCCAGGTG TGTGAGGTGTGGACTTGAGAAGGCTGGTGGGGTGGAAAATGATTATCGGG GGTGAAACACGTGAAACCAGCAGGCTCACGAGGGAGCGAGAGCGATAAAC CGCGCGCTCTCAGATATATACCCCCAATGAATGAGGGCAGCGAGGTTTGC ACGTGTCACATGAGTTTTTTTATCGATGTGAAAATGAGTCAACGGCTTCA TTACTTCACAACGCGCCAGATATGTACAGAAGACGAGCAGCAAAATAAAA ATGTTTTTGATAGCCGCGAAAAATCGGAAATAACAATGCTGCACGCGGTG CCTACTCGTAATATCTCTGTATTGCTGTCATTGGACCCCCTTCGGCGCGC AAACCTCATCCTTACCAGAGCTTTCGAGCGGACAGGCGCCTCGTCAGGCT GGTGAGTCGCCCGCGCGCCAATCCGACGCGATGCATCGTGTGCTGCTTTG TGCTGTATGTGTTGAGTTTTGCCACCTAGCCCGTAGGACGCAACATAGCC TTCAGCCGCGCGTGACATCTCGCTGTTGTGAAATATTCCGCTTGTCAACG TGGTGTAGCTTCACTCTCTAGGTCTCTCGGTCAAACTCACAAACACTTCA GATCTACAGCAGTAGACGACCAACCGATACACCAAAGCTAACAGAGTATA AGCGCACCACGTAACGTACACTCAAAGTAGTTCCTACAGGCTCGGCCGTA CATCAATGCGCAAGACTGGGGAGTAAGGCTGCCACACTCTACACATGATG TCAACACCCCCCCTTCAACCGGCCGTGCTTGCGTCTCTCAAGGTTGTGTT CCGTTACATGTTCGACAAGGCCATACGCAAGTATCGGGCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig77:246470..250059-

>mRNA_P-littoralis_Contig77.68.1 ID=mRNA_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=CDS|length=825bp|location=Sequence derived from alignment at P-littoralis_Contig77:246470..250059- (Pylaiella littoralis U1_48)
ATGTCTTCATTTTTCGTCGATGGACAATTTACGGATGCATGGATTGTCGA
CCGTGCGTTGTTCGAGCATCTCAGCGGGGGGGCGTGCTCCTGCTGTGGGA
TTACTCGCCAAGAGAGAGGAGCGCTCATGCAGGGCTGCTCCGATATCGAG
ACCGACGACGGACGGCAGGAGGGCAAGTCGCCTTGGCCTGCAGCTATGTC
TGATGCAGTATGGACTGCTCGAGTCAAACTTAGGGCGATCATGAAGGAGG
ACATGCCCCAGTATAACGAGTTCTGGGAGAAGCATGCTCAGGGATTCTCT
ACTTGGTGGAAGGGGCTATCGGCAGCAGAGAGGCGGGAAATTTTGAGCAT
GCCAGTAAATGAGGTATCAGCTGCTTTCCAGGGAAAGTACGACCTTCGGG
GAGCGTACTCGGTGGTAATGTCTGCAGTGAACGAGCAGGTCCGAAATTTC
GACAAGACAGGCATCAAAGGTGACAGTCGGACCGCCGCCGAGCTTTCTTT
CGAGGAGTCTCTCAAAGTCGACCGTGGCGCCTACGTCGGAAAAATGTTCG
TGAGCGACACCCACGCCAAGCAATTTTTCGACTTGTGTAAGCAAGTTGGC
GGGCCGAGGTTGCTACCATCCAAGCCTCGAGGGAGAGGCGCCGATCTCTC
GTTGGAGAGCAACGGACCGGTTGCTTCGGTCCACAGACCTTCCAGCCAAG
ACGTTAACAACGTGGAAGTCGATGCGACCAAAACGGAGGGCCAGAGCTTT
CGAGCGGACAGGCGCCTCGTCAGGCTGGTTGTGTTCCGTTACATGTTCGA
CAAGGCCATACGCAAGTATCGGGCA
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