mRNA_P-littoralis_Contig77.46.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: D7G6Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 7.510e-139 Identity = 272/405 (67.16%), Postives = 304/405 (75.06%), Query Frame = 1
Query: 1 SDRQEE-PLEAGEDGTFDLGSPSPPASPVKPV---RKKQNAAEG--SKAPVAESELCGSPPIKDDWEKVDLKGADDGPPLPPXXXXXXXXXXXXXXESL-----EDFKDAVEGNFTTEQTDTAQQAGTERAAGSGGSG--VDSDAADTRSGQAAAAETSVSQPPSIVEERPPPATGRAESIIATGLANVRLPMGYVRRCGEEP----VDSDDEDQFHDAFDSGPGMVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
+DR EE PLEAGEDGTFD+G SPP SP K V R+ QNA S AP + + CGSPPIKDDWEKVDL GAD+G LPP S EDF+DAVE T+ QQAGT G+ VD D+ GQAA E+S + PP V E+ PP G ++IA+GLANVRLPMGY R+ ++ VDSD E+QFHDA DSGPG+VKDA KAREMKE GNEHY+N +FEDA+DYYTMALHYCPEDE HKKDRAV+LANRAQGHL+L+EYE VVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXX LRLAKESVPRLEKL NDKNE+MKEEAIGKLK+LGN++LGNFGLSTDNFKMKQDP TGSYS+NFER
Sbjct: 3 NDRNEEAPLEAGEDGTFDVGDASPPPSPPKRVGSARRTQNATATTVSTAPATDGDPCGSPPIKDDWEKVDLDGADEG--LPPPAGNASQGREAGAPPSAPEYAQEDFQDAVE----TQDESATQQAGTGATTTEDGTSCCVD-DSPGKACGQAARVESSAAAPPHAVVEQRPPGLGGRVNVIASGLANVRLPMGYGRQMRQDEEDGLVDSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A835YHX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.850e-39 Identity = 106/187 (56.68%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 625 MVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXG------LRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGS-YSVNFER 1164
M KDAAKA+EMKE GN +Y K + DA D YT+AL +CP+DE ++++AVY +NRA HL+L++++ VV DCT AL + P YVKALLR XXXXXXXXXXXXXXXXXXXXXX ++ A + RL+KL +K E++K+EA+GKLKELGNS+LG+FGLS DNFK+ QD G Y+++F +
Sbjct: 1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A7S3HEF4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.670e-37 Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 631 KDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVN 1155
K+ +KA E KE GN ++RNK+++DA++ Y+ A+ +CPEDEE+K++ A + NR+ + ++E+E VVEDCTAAL L YVK + R + + RL+ +DK +MK+EA+GKLKELGNSILGNFG+S DNFKM QDP TGS++++
Sbjct: 73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A7S2S6C6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.540e-36 Identity = 99/180 (55.00%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 625 MVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
++++A A ++KE GNE Y++K++ +AID Y+ AL Y PE++ + RAVYL+NRA L L YE V+EDCT ALE DP YVKALLR XXXXXXXXXXXXXXXXXXXX A + RL+ + K+E +K+E +GKLK+LGN++LG FG+S DNFK QDP+TGSYS++F++
Sbjct: 60 VIRNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: UPI0019298FD4 (tetratricopeptide repeat protein 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298FD4) HSP 1 Score: 140 bits (354), Expect = 7.370e-35 Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 1
Query: 457 IVEERPPPATGRAESIIATGLANVRLPMGYVRRCGEEPVDSDDEDQFHDAFDSGPGMVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
++E+ P A ++ S +TG A V DS DE+ F DA + + K + + K GN + + +EDA+ Y +AL E + ++ R++ ANRA L+L++Y+ +++CT ALEL+PSYVKALLR A+ ++ RLE + +K E+MKEE IGKLKE+GNS+LG FG+S DNFK +DP TGSYS++F+R
Sbjct: 3 LIEQEPDDANEQSRSSPSTGAAAV------------PDADSSDEEPFEDALNEEQLLEKARNQVNDAKIEGNRLFGSDQYEDALSKYELALQLASEGPDSEEIRSMCHANRAICFLKLQKYDDTIKECTKALELNPSYVKALLRRAEAHEKLDHLEEAIADMKKIMELDPSNDQARRTIQRLEPILAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR 226
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A7S0J1B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA) HSP 1 Score: 137 bits (346), Expect = 1.130e-33 Identity = 73/173 (42.20%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 646 AREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
AR KE GN H+ +++DAI+ Y+ A+ P D +RAV+ ANRA + ++ EYEAV+EDCT+AL + P YVKAL+R + A ++PRLE N K E+ K+E +GKLK+LGNS+LG FG+S DNFK ++DP TGSY+++F++
Sbjct: 62 ARTAKEQGNLHFGKGEWDDAIECYSEAIEVAPAD---SPERAVFFANRAACYSKIHEYEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEKDPSTGSYNISFQQ 231
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A484E7C7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C7_BRELC) HSP 1 Score: 138 bits (347), Expect = 1.420e-33 Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 592 QFHDAFDSGP--------GMVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
++ DA ++ P G + KA KE GN+ + + DAI+ YT AL CP +EE+ +RAVY +NRA L+L E ++DCT A+ L P+YVKALLR + A +S RL+K+ +++ E+MK E + KLK GN+ILG FGLSTDNFKM QDP TGSY++NFE+
Sbjct: 50 KYDDASENAPEEEKGDSKGKTETVKKASSAKELGNKFFTRGSYLDAIECYTTALKLCPSEEEYAYNRAVYFSNRAACLLRLGRTEESIDDCTQAVTLSPTYVKALLRRAEAYEKLDKLEEALADFDAVLKIDPTVPAAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFKMVQDPATGSYNINFEQ 248
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A7S3Y5I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5I1_HETAK) HSP 1 Score: 138 bits (347), Expect = 2.890e-33 Identity = 72/177 (40.68%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 631 KDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFE 1161
KD A++ KE GN H+ K+++DAI Y A+ YCP+DEE+K+ ++ Y NRA L EY+ V+EDCT++LEL P Y K L+R LR A+ RL ++ N++ E++KEE +GKLK+LGNS+LG FG+S DNF++ QDP +G Y+++ +
Sbjct: 103 KDPEFAQQEKEQGNVHFAAKEYDDAILCYNNAILYCPDDEEYKEKKSTYFGNRAACFLYKHEYDKVIEDCTSSLELKPDYTKVLMRRAQAAEKLEKFEDALKDVTKVCELEPSLRKAQLDKLRLTQICNERMEKLKEETMGKLKDLGNSVLGYFGMSLDNFQVNQDPNSGGYNISMK 279
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A0M0J422_9EUKA (Tetratricopeptide repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA) HSP 1 Score: 135 bits (341), Expect = 3.270e-33 Identity = 78/173 (45.09%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 640 AKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNF 1158
A+AR KE GN H++ ++++ AID YT A+ P DE +RAV+ ANRA ++ E+E VV+DCTAALEL P Y KAL+R + +V RLEK +K E+ KEE +GKLK+LGNS+LG FGLS DNFK +DP TGSYS++F
Sbjct: 40 AEARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDE---PERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISF 209
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Match: A0A0P1AN90_PLAHL (TPR repeat-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN90_PLAHL) HSP 1 Score: 137 bits (344), Expect = 4.250e-33 Identity = 81/200 (40.50%), Postives = 115/200 (57.50%), Query Frame = 1
Query: 565 EPVDSDDEDQFHDAFDSGPGMVKDAAKAREMKETGNEHYRNKDFEDAIDYYTMALHYCPEDEEHKKDRAVYLANRAQGHLQLKEYEAVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLAKESVPRLEKLQNDKNERMKEEAIGKLKELGNSILGNFGLSTDNFKMKQDPETGSYSVNFER 1164
+ VD D D+ ++ VK A+ A+E+ GN+ + F DAI+ YT AL CP DEE+ +RAVY +NRA ++L E V+DCT A+ L P+YVKALLR + A ++ RL+K+ +++ E+MK E + KLK GN+ILG FGLSTDNF+M QDP TGSY++NF++
Sbjct: 53 DDVDEDTSDEKNEGVKDKSKYVKKASSAKEL---GNKFFSRGSFLDAIECYTTALKLCPVDEEYAYNRAVYFSNRAACLMRLGRTEESVDDCTQAVTLSPTYVKALLRRAEAYEKMDKLEEALADYNAILKIDPTVPTAVKNHERLQKVVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYNINFQQ 249 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.46.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.46.2 >prot_P-littoralis_Contig77.46.2 ID=prot_P-littoralis_Contig77.46.2|Name=mRNA_P-littoralis_Contig77.46.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=210bp MGYVRRCGEEPVDSDDEDQFHDAFDSGPGMVKDAAKAREMKETGNEHYRNback to top mRNA from alignment at P-littoralis_Contig77:149535..152500+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.46.2 ID=mRNA_P-littoralis_Contig77.46.2|Name=mRNA_P-littoralis_Contig77.46.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2966bp|location=Sequence derived from alignment at P-littoralis_Contig77:149535..152500+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:149535..152500+ >mRNA_P-littoralis_Contig77.46.2 ID=mRNA_P-littoralis_Contig77.46.2|Name=mRNA_P-littoralis_Contig77.46.2|organism=Pylaiella littoralis U1_48|type=CDS|length=630bp|location=Sequence derived from alignment at P-littoralis_Contig77:149535..152500+ (Pylaiella littoralis U1_48)back to top |